2JBRA

Structure of the monooxygenase component of p-hydroxyphenylacetate hydroxylase from acinetobacter baumanni
Total Genus 143
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
143
sequence length
399
structure length
399
Chain Sequence
RLVYTHAQTPDVSGVSMLEKIQQILPQIAKNAESAEQLRRVPDENIKLLKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFSLLCTHSHQIAMFSKQLQDEIWLKDPDATASSSIAPFGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGFNRFDADGNKIYSFGVIPRSDYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPYRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQYPNKETLAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRELMGMEPDPTMV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords P-HYDROXYPHENYLACETATE HYDROXYLASE C2 OXYGENASE COMPONENT
publication title Structure of the Monooxygenase Component of a Two-Component Flavoprotein Monooxygenase.
pubmed doi rcsb
source organism Acinetobacter baumannii
total genus 143
structure length 399
sequence length 399
chains with identical sequence B, C, D
ec nomenclature ec 1.14.14.9: 4-hydroxyphenylacetate 3-monooxygenase.
pdb deposition date 2006-12-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain
A PF08028 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 2jbrA01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 2jbrA03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 2jbrA02
3OIBA 4IV6A 1WS9A 2PG0A 2R0MA 1U8VA 1IVHA 4L3YA 3M9VA 4X28A 2VIGA 3D9FA 4Q0TA 2Z1QA 1EGCA 3SWOA 3TTBA 2JBTA 4KTOA 3D1IA 1FS8A 4NXLA 4L3XA 2YYJA 2A1TA 3II9A 3OWAA 3PFDA 3GM6A 2UXWA 3HWCA 4Q1OA 4DOYA 2RFQA 5K3JA 3MPIA 3D9DA 3OWMA 1EGEA 5K3GA 2J7AA 2IX6A 4X28C 4OO2A 3EONA 3BNJA 4KCFA 3S7WA 2R0NA 1OAHA 4XVXA 2JBRA 2IX5A 1FS7A 3BNHA 3L1TA 4L38A 3SXQA 1IS2A 3NF4A 3BNFA 3RKHA 2VR0A 3X0XA 3UBRA 1GU6A 2E81A 2JBSA 3BNGA 1R2JA 1UKWA 3B96A 3GQTA 4RM7A 1QDBA 5K3IA 3EOMA 4Q17A 2FONA 3D9EA 4N5FA 4G5EA 3AFEA 3UU9A 4U83A 3R7KA 2DVLA 4L3ZA 2ZAFA 1FS9A 1W07A 2RF7A 3P4TA 2CX9A 3F29A 1RX0A 3MKHA 1SIRA 2DDHA 4Q5CA 3MDDA 2E80A 2YYLA 2YYIA 4ZXVA 4Q5BA 2RDZA 3MPJA 4JEKA 4P13A 3SCEA 1T9GA 4M9AA 2ZO5A 3LG1A 2YYGA 4IRNA 3MMOA 2YYMA 3AFFA 4Q4UA 3MDEA 4WJYA 3X0YA 1SIQA 2C0UA 1BUCA 4L1FA 3D6BA 1JQIA 2EBAA 5K3HA 2D29A 4ZYJA 3MXLA 3TORA 4O5MA 2REHA 1EGDA 2JIFA 2C12A 2YYKA 4HR3A 4W9UA 2OR0A 3SF6A 3FCJA 3FO3A 3GNCA 1UDYA 3LGQA 2WBIA 3D9GA 2OT4A
chains in the Genus database with same CATH superfamily
3OIBA 1Y8PA 4MPEA 2XS8A 4IV6A 1WS9A 2PG0A 2R0MA 1U8VA 1IVHA 4L3YA 3M9VA 2E0AA 4X28A 2XQRB 2VIGA 3D9FA 1SC5A 2HJNA 2Z1QA 4Q0TA 1EGCA 4AKGA 3SWOA 1PI1A 2JBTA 2LFWA 4H7QA 3TTBA 4KTOA 3D1IA 5B5WA 1FS8A 3Q23A 2CJ7A 4NXLA 4L3XA 4P79A 5M4KA 1XFVA 2CJ5A 2A1TA 3II9A 3OWAA 3PFDA 1Y8OA 2UXWA 2YYJA 3GM6A 4DOYA 2RFQA 3HWCA 4HKRA 4Q1OA 2CJ8A 3C2PA 2R03A 5K3JA 2XS1A 4V25A 3MPIA 3D9DA 3OWMA 1RJ4A 1EGEA 4G97A 5K3GA 1JM6A 2R02A 3D2RA 4E01A 5EZ3A 2FP2A 2J7AA 1XFYA 2IX6A 4X28C 2VF1A 4E02A 4OO2A 4FF4A 3EONA 2QR4A 3BNJA 3CE2A 3TZ5A 4KCFA 2BU7A 4QICA 3S7WA 2R0NA 2Q8HA 1XFUA 4JIOA 1LVCA 4H81A 5B5VA 1OAHA 1Y0VA 1XFZA 4LQSB 3VADA 5M4NA 2EBFX 5BRMA 2ZDXA 4DZYA 4XVXA 1K93A 2JBRA 2IX5A 1FS7A 3BNHA 3L1TA 4KS9A 4L38A 3SXQA 4F0XA 5B6BA 2CJ4A 1IS2A 1K8TA 1SK6A 3Q22A 3NF4A 3BNFA 3RKHA 2VR0A 3X0XA 3UBRA 1GU6A 1Y8NA 1X90A 2E81A 4MP2A 3VKHA 2JBSA 2Q8FA 2AZEA 3BNGA 1R2JA 1UKWA 3B96A 3GQTA 4RM7A 1QDBA 3Q0AA 5K3IA 3EOMA 5M4MA 1RJ1A 1X8ZA 4KSFA 4Q17A 4AKIA 5J71A 3C3LA 2PNRA 3TZ4A 2FONA 3D9EA 1X91A 4N5FA 2FP1A 1S26A 3AFEA 4G5EA 4LQQB 3UU9A 4U83A 5J6AA 3R7KA 2DVLA 4L3ZA 2ZAFA 5M4PA 3U33A 2BU5A 1FS9A 1W07A 4MPCA 4E00A 4MPNA 2RF7A 2ZKJA 3P4TA 2OJQA 2CX9A 3F29A 1XG2B 2R05A 1GKXA 3VKGA 1RX0A 3MKHA 1SIRA 2DDHA 2BTZA 3MDDA 4Q5CA 3DJLA 2YGWA 2E80A 2YYLA 2YYIA 4ZXVA 4Q5BA 1XFXA 2Q8IA 2RDZA 3MPJA 4JEKA 4P13A 1XFWA 2BU8A 3SCEA 1T9GA 4M9AA 3TZ0A 3TZ2A 2ZO5A 3LG1A 2YYGA 4IRNA 1RP3A 2GBBA 4V26A 4FF3A 1GKZA 3MMOA 2AO2A 4HKSA 2YYMA 3AFFA 2EBHX 3CRLA 4H85A 4Q4UA 5GJVE 3MDEA 3C46A 4WJYA 3X0YA 1SIQA 3X29A 2C0UA 1BUCA 4L1FA 1R3BA 3D6BA 2Q8GA 1JQIA 2EBAA 2F6LA 1K90A 4FZ4A 5K3HA 2D29A 1GJVA 4ZYJA 2PO4A 3MXLA 4MP7A 4O5MA 3TORA 5BRKA 4AI6A 2REHA 2BU6A 4AKHA 1EGDA 2JIFA 2C12A 1PK0A 2YYKA 4HR3A 2OEXA 3N0RA 4W9UA 4J1VA 5GJWE 4FF2A 2EC5A 2OR0A 4KSAA 3SF6A 2OEVA 3KMLA 3Q24A 2ZDYA 3FCJA 3FO3A 3GNCA 1UDYA 3LGQA 2BU2A 4FF1A 2WBIA 3CRKA 3D9GA 4JIZA 2OT4A 2CJ6A
chains in the Genus database with same CATH topology
3OIBA 4IV6A 1WS9A 2PG0A 2R0MA 1U8VA 1IVHA 4L3YA 3M9VA 4X28A 2VIGA 3D9FA 4Q0TA 2Z1QA 1EGCA 3SWOA 3TTBA 2JBTA 4KTOA 3D1IA 1FS8A 4NXLA 4L3XA 2YYJA 2A1TA 3II9A 3OWAA 3PFDA 3GM6A 2UXWA 3HWCA 4Q1OA 4DOYA 2RFQA 5K3JA 3MPIA 3D9DA 3OWMA 1EGEA 5K3GA 2J7AA 2IX6A 4X28C 4OO2A 3EONA 3BNJA 4KCFA 3S7WA 2R0NA 1OAHA 4XVXA 2JBRA 2IX5A 1FS7A 3BNHA 3L1TA 4L38A 3SXQA 1IS2A 3NF4A 3BNFA 3RKHA 2VR0A 3X0XA 3UBRA 1GU6A 2E81A 2JBSA 3BNGA 1R2JA 1UKWA 3B96A 3GQTA 4RM7A 1QDBA 5K3IA 3EOMA 4Q17A 2FONA 3D9EA 4N5FA 4G5EA 3AFEA 3UU9A 4U83A 3R7KA 2DVLA 4L3ZA 2ZAFA 1FS9A 1W07A 2RF7A 3P4TA 2CX9A 3F29A 1RX0A 3MKHA 1SIRA 2DDHA 4Q5CA 3MDDA 2E80A 2YYLA 2YYIA 4ZXVA 4Q5BA 2RDZA 3MPJA 4JEKA 4P13A 3SCEA 1T9GA 4M9AA 2ZO5A 3LG1A 2YYGA 4IRNA 3MMOA 2YYMA 3AFFA 4Q4UA 3MDEA 4WJYA 3X0YA 1SIQA 2C0UA 1BUCA 4L1FA 3D6BA 1JQIA 2EBAA 5K3HA 2D29A 4ZYJA 3MXLA 3TORA 4O5MA 2REHA 1EGDA 2JIFA 2C12A 2YYKA 4HR3A 4W9UA 2OR0A 3SF6A 3FCJA 3FO3A 3GNCA 1UDYA 3LGQA 2WBIA 3D9GA 2OT4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OIB A;  4IV6 A;  1WS9 A;  2PG0 A;  2R0M A;  1U8V A;  1IVH A;  4L3Y A;  3M9V A;  4X28 A;  2VIG A;  3D9F A;  4Q0T A;  2Z1Q A;  1EGC A;  3SWO A;  3TTB A;  2JBT A;  4KTO A;  3D1I A;  1FS8 A;  4NXL A;  4L3X A;  2YYJ A;  2A1T A;  3II9 A;  3OWA A;  3PFD A;  3GM6 A;  2UXW A;  3HWC A;  4Q1O A;  4DOY A;  2RFQ A;  5K3J A;  3MPI A;  3D9D A;  3OWM A;  1EGE A;  5K3G A;  2J7A A;  2IX6 A;  4X28 C;  4OO2 A;  3EON A;  3BNJ A;  4KCF A;  3S7W A;  2R0N A;  1OAH A;  4XVX A;  2JBR A;  2IX5 A;  1FS7 A;  3BNH A;  3L1T A;  4L38 A;  3SXQ A;  1IS2 A;  3NF4 A;  3BNF A;  3RKH A;  2VR0 A;  3X0X A;  3UBR A;  1GU6 A;  2E81 A;  2JBS A;  3BNG A;  1R2J A;  1UKW A;  3B96 A;  3GQT A;  4RM7 A;  1QDB A;  5K3I A;  3EOM A;  4Q17 A;  2FON A;  3D9E A;  4N5F A;  4G5E A;  3AFE A;  3UU9 A;  4U83 A;  3R7K A;  2DVL A;  4L3Z A;  2ZAF A;  1FS9 A;  1W07 A;  2RF7 A;  3P4T A;  2CX9 A;  3F29 A;  1RX0 A;  3MKH A;  1SIR A;  2DDH A;  4Q5C A;  3MDD A;  2E80 A;  2YYL A;  2YYI A;  4ZXV A;  4Q5B A;  2RDZ A;  3MPJ A;  4JEK A;  4P13 A;  3SCE A;  1T9G A;  4M9A A;  2ZO5 A;  3LG1 A;  2YYG A;  4IRN A;  3MMO A;  2YYM A;  3AFF A;  4Q4U A;  3MDE A;  4WJY A;  3X0Y A;  1SIQ A;  2C0U A;  1BUC A;  4L1F A;  3D6B A;  1JQI A;  2EBA A;  5K3H A;  2D29 A;  4ZYJ A;  3MXL A;  3TOR A;  4O5M A;  2REH A;  1EGD A;  2JIF A;  2C12 A;  2YYK A;  4HR3 A;  4W9U A;  2OR0 A;  3SF6 A;  3FCJ A;  3FO3 A;  3GNC A;  1UDY A;  3LGQ A;  2WBI A;  3D9G A;  2OT4 A; 
#chains in the Genus database with same CATH topology
 3OIB A;  1Y8P A;  4MPE A;  2XS8 A;  4IV6 A;  1WS9 A;  2PG0 A;  2R0M A;  1U8V A;  1IVH A;  4L3Y A;  3M9V A;  2E0A A;  4X28 A;  2XQR B;  2VIG A;  3D9F A;  1SC5 A;  2HJN A;  2Z1Q A;  4Q0T A;  1EGC A;  4AKG A;  3SWO A;  1PI1 A;  2JBT A;  2LFW A;  4H7Q A;  3TTB A;  4KTO A;  3D1I A;  5B5W A;  1FS8 A;  3Q23 A;  2CJ7 A;  4NXL A;  4L3X A;  4P79 A;  5M4K A;  1XFV A;  2CJ5 A;  2A1T A;  3II9 A;  3OWA A;  3PFD A;  1Y8O A;  2UXW A;  2YYJ A;  3GM6 A;  4DOY A;  2RFQ A;  3HWC A;  4HKR A;  4Q1O A;  2CJ8 A;  3C2P A;  2R03 A;  5K3J A;  2XS1 A;  4V25 A;  3MPI A;  3D9D A;  3OWM A;  1RJ4 A;  1EGE A;  4G97 A;  5K3G A;  1JM6 A;  2R02 A;  3D2R A;  4E01 A;  5EZ3 A;  2FP2 A;  2J7A A;  1XFY A;  2IX6 A;  4X28 C;  2VF1 A;  4E02 A;  4OO2 A;  4FF4 A;  3EON A;  2QR4 A;  3BNJ A;  3CE2 A;  3TZ5 A;  4KCF A;  2BU7 A;  4QIC A;  3S7W A;  2R0N A;  2Q8H A;  1XFU A;  4JIO A;  1LVC A;  4H81 A;  5B5V A;  1OAH A;  1Y0V A;  1XFZ A;  4LQS B;  3VAD A;  5M4N A;  2EBF X;  5BRM A;  2ZDX A;  4DZY A;  4XVX A;  1K93 A;  2JBR A;  2IX5 A;  1FS7 A;  3BNH A;  3L1T A;  4KS9 A;  4L38 A;  3SXQ A;  4F0X A;  5B6B A;  2CJ4 A;  1IS2 A;  1K8T A;  1SK6 A;  3Q22 A;  3NF4 A;  3BNF A;  3RKH A;  2VR0 A;  3X0X A;  3UBR A;  1GU6 A;  1Y8N A;  1X90 A;  2E81 A;  4MP2 A;  3VKH A;  2JBS A;  2Q8F A;  2AZE A;  3BNG A;  1R2J A;  1UKW A;  3B96 A;  3GQT A;  4RM7 A;  1QDB A;  3Q0A A;  5K3I A;  3EOM A;  5M4M A;  1RJ1 A;  1X8Z A;  4KSF A;  4Q17 A;  4AKI A;  5J71 A;  3C3L A;  2PNR A;  3TZ4 A;  2FON A;  3D9E A;  1X91 A;  4N5F A;  2FP1 A;  1S26 A;  3AFE A;  4G5E A;  4LQQ B;  3UU9 A;  4U83 A;  5J6A A;  3R7K A;  2DVL A;  4L3Z A;  2ZAF A;  5M4P A;  3U33 A;  2BU5 A;  1FS9 A;  1W07 A;  4MPC A;  4E00 A;  4MPN A;  2RF7 A;  2ZKJ A;  3P4T A;  2OJQ A;  2CX9 A;  3F29 A;  1XG2 B;  2R05 A;  1GKX A;  3VKG A;  1RX0 A;  3MKH A;  1SIR A;  2DDH A;  2BTZ A;  3MDD A;  4Q5C A;  3DJL A;  2YGW A;  2E80 A;  2YYL A;  2YYI A;  4ZXV A;  4Q5B A;  1XFX A;  2Q8I A;  2RDZ A;  3MPJ A;  4JEK A;  4P13 A;  1XFW A;  2BU8 A;  3SCE A;  1T9G A;  4M9A A;  3TZ0 A;  3TZ2 A;  2ZO5 A;  3LG1 A;  2YYG A;  4IRN A;  1RP3 A;  2GBB A;  4V26 A;  4FF3 A;  1GKZ A;  3MMO A;  2AO2 A;  4HKS A;  2YYM A;  3AFF A;  2EBH X;  3CRL A;  4H85 A;  4Q4U A;  5GJV E;  3MDE A;  3C46 A;  4WJY A;  3X0Y A;  1SIQ A;  3X29 A;  2C0U A;  1BUC A;  4L1F A;  1R3B A;  3D6B A;  2Q8G A;  1JQI A;  2EBA A;  2F6L A;  1K90 A;  4FZ4 A;  5K3H A;  2D29 A;  1GJV A;  4ZYJ A;  2PO4 A;  3MXL A;  4MP7 A;  4O5M A;  3TOR A;  5BRK A;  4AI6 A;  2REH A;  2BU6 A;  4AKH A;  1EGD A;  2JIF A;  2C12 A;  1PK0 A;  2YYK A;  4HR3 A;  2OEX A;  3N0R A;  4W9U A;  4J1V A;  5GJW E;  4FF2 A;  2EC5 A;  2OR0 A;  4KSA A;  3SF6 A;  2OEV A;  3KML A;  3Q24 A;  2ZDY A;  3FCJ A;  3FO3 A;  3GNC A;  1UDY A;  3LGQ A;  2BU2 A;  4FF1 A;  2WBI A;  3CRK A;  3D9G A;  4JIZ A;  2OT4 A;  2CJ6 A; 
#chains in the Genus database with same CATH homology
 3OIB A;  4IV6 A;  1WS9 A;  2PG0 A;  2R0M A;  1U8V A;  1IVH A;  4L3Y A;  3M9V A;  4X28 A;  2VIG A;  3D9F A;  4Q0T A;  2Z1Q A;  1EGC A;  3SWO A;  3TTB A;  2JBT A;  4KTO A;  3D1I A;  1FS8 A;  4NXL A;  4L3X A;  2YYJ A;  2A1T A;  3II9 A;  3OWA A;  3PFD A;  3GM6 A;  2UXW A;  3HWC A;  4Q1O A;  4DOY A;  2RFQ A;  5K3J A;  3MPI A;  3D9D A;  3OWM A;  1EGE A;  5K3G A;  2J7A A;  2IX6 A;  4X28 C;  4OO2 A;  3EON A;  3BNJ A;  4KCF A;  3S7W A;  2R0N A;  1OAH A;  4XVX A;  2JBR A;  2IX5 A;  1FS7 A;  3BNH A;  3L1T A;  4L38 A;  3SXQ A;  1IS2 A;  3NF4 A;  3BNF A;  3RKH A;  2VR0 A;  3X0X A;  3UBR A;  1GU6 A;  2E81 A;  2JBS A;  3BNG A;  1R2J A;  1UKW A;  3B96 A;  3GQT A;  4RM7 A;  1QDB A;  5K3I A;  3EOM A;  4Q17 A;  2FON A;  3D9E A;  4N5F A;  4G5E A;  3AFE A;  3UU9 A;  4U83 A;  3R7K A;  2DVL A;  4L3Z A;  2ZAF A;  1FS9 A;  1W07 A;  2RF7 A;  3P4T A;  2CX9 A;  3F29 A;  1RX0 A;  3MKH A;  1SIR A;  2DDH A;  4Q5C A;  3MDD A;  2E80 A;  2YYL A;  2YYI A;  4ZXV A;  4Q5B A;  2RDZ A;  3MPJ A;  4JEK A;  4P13 A;  3SCE A;  1T9G A;  4M9A A;  2ZO5 A;  3LG1 A;  2YYG A;  4IRN A;  3MMO A;  2YYM A;  3AFF A;  4Q4U A;  3MDE A;  4WJY A;  3X0Y A;  1SIQ A;  2C0U A;  1BUC A;  4L1F A;  3D6B A;  1JQI A;  2EBA A;  5K3H A;  2D29 A;  4ZYJ A;  3MXL A;  3TOR A;  4O5M A;  2REH A;  1EGD A;  2JIF A;  2C12 A;  2YYK A;  4HR3 A;  4W9U A;  2OR0 A;  3SF6 A;  3FCJ A;  3FO3 A;  3GNC A;  1UDY A;  3LGQ A;  2WBI A;  3D9G A;  2OT4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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