2IX6A

Short chain specific acyl-coa oxidase from arabidopsis thaliana, acx4
Total Genus 141
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
141
sequence length
416
structure length
416
Chain Sequence
KSSYFDLPPMEMSVAFPQATPASTFPPCTSDYYHFNDLLTPEEQAIRKKVRECMEKEVAPIMTEYWEKAEFPFHITPKLGAMGVAGGSIKGYGCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTTNQINGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWISSKARETASLGRELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTGIASFKPAT
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords ACYL-COENZYME A OXIDASE 4, PEROXISOMAL
publication title Controlling Electron Transfer in Acyl-Coa Oxidases and Dehydrogenases: A Structural View.
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 141
structure length 416
sequence length 416
chains with identical sequence B, C, D, E, F
ec nomenclature ec 1.3.3.6: Acyl-CoA oxidase.
pdb deposition date 2006-07-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain
A PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain
A PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 2ix6A01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 2ix6A03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 2ix6A02
2IX5A 2JBRA 3MKHA 1EGCA 2OT4A 3GNCA 2DVLA 4ZXVA 2A1TA 2OR0A 2R0MA 3BNHA 2E80A 2YYKA 1IVHA 3MPJA 3SWOA 3FO3A 4Q5BA 4X28C 3LG1A 3OWMA 3D6BA 4HR3A 2RDZA 3RKHA 3HWCA 3SCEA 2WBIA 4KTOA 1R2JA 2VIGA 3EOMA 3F29A 2C0UA 1GU6A 4ZYJA 1FS9A 2ZO5A 3GM6A 1QDBA 3R7KA 3BNJA 3GQTA 4XVXA 3X0YA 2JBSA 2D29A 3D9GA 3LGQA 3AFFA 4Q0TA 2E81A 1JQIA 3TTBA 4U83A 3B96A 2YYLA 4G5EA 4L3ZA 1EGEA 4OO2A 1WS9A 1FS8A 1T9GA 3MXLA 4DOYA 1BUCA 3AFEA 1SIQA 4JEKA 4IRNA 3D1IA 1SIRA 3D9FA 2YYIA 2UXWA 3D9DA 3MDDA 4O5MA 3X0XA 5K3IA 2Z1QA 2YYGA 3TORA 5K3HA 4WJYA 3OIBA 3PFDA 3UBRA 3BNFA 2R0NA 4N5FA 2PG0A 4W9UA 2VR0A 2RFQA 4L38A 2J7AA 2CX9A 2JBTA 3P4TA 4L3YA 2C12A 4Q17A 1FS7A 4Q5CA 2YYMA 2FONA 3OWAA 2REHA 1IS2A 4RM7A 3M9VA 3NF4A 2EBAA 4P13A 3SXQA 4IV6A 3MDEA 1OAHA 4L1FA 2ZAFA 2IX6A 3FCJA 3EONA 5K3JA 3S7WA 2JIFA 4KCFA 4NXLA 2YYJA 3II9A 3MMOA 4Q4UA 4Q1OA 2DDHA 3SF6A 4M9AA 5K3GA 1U8VA 3MPIA 3L1TA 3D9EA 1RX0A 1UDYA 3UU9A 4X28A 1EGDA 4L3XA 2RF7A 3BNGA 1W07A 1UKWA
chains in the Genus database with same CATH superfamily
2IX5A 2JBRA 4MP7A 3MKHA 1EGCA 2BU2A 2OT4A 3GNCA 2DVLA 1X8ZA 3TZ0A 4ZXVA 2A1TA 2OR0A 2R0MA 1PI1A 2E0AA 2E80A 2OEXA 2YYKA 3BNHA 4G97A 1IVHA 2AO2A 4DZYA 4E01A 3Q24A 1XFZA 3MPJA 4MPCA 2ZDYA 4FF1A 2EBHX 3SWOA 3FO3A 4Q5BA 4X28C 1K90A 4LQQB 1JM6A 3LG1A 3OWMA 3D6BA 3N0RA 2Q8IA 4HR3A 2RDZA 3RKHA 3HWCA 3SCEA 2WBIA 3C3LA 4KTOA 2R03A 4E02A 3VADA 1R2JA 2FP1A 2VIGA 3EOMA 1SC5A 2BU8A 2C0UA 1GU6A 4ZYJA 1FS9A 2ZO5A 3F29A 1X91A 3GM6A 4AKGA 1QDBA 3R7KA 4J1VA 3VKHA 3BNJA 3KMLA 3GQTA 2FP2A 4XVXA 1K8TA 4V25A 2R05A 2Q8GA 3X0YA 2JBSA 2D29A 3D9GA 1GJVA 3LGQA 5B6BA 1RP3A 2VF1A 3AFFA 2PNRA 2E81A 4KS9A 1JQIA 4Q0TA 4U83A 3B96A 1S26A 4QICA 2YYLA 4G5EA 4L3ZA 3TTBA 2BU5A 1EGEA 4OO2A 4AKHA 1WS9A 4E00A 2PO4A 2R02A 1FS8A 5M4PA 1T9GA 3MXLA 4DOYA 1BUCA 3AFEA 2BU6A 1SIQA 2CJ4A 2CJ8A 4HKSA 4JEKA 4KSFA 4IRNA 5BRKA 5J6AA 4H7QA 3D1IA 4H85A 3Q23A 1SIRA 3D9FA 4JIZA 2LFWA 2YYIA 2QR4A 2ZDXA 5BRMA 2UXWA 3D9DA 1XFXA 1Y8OA 1LVCA 4MPNA 3MDDA 4O5MA 3X0XA 1Y8PA 2F6LA 5K3IA 2BTZA 2Z1QA 2YYGA 2CJ6A 2OEVA 3VKGA 1XFYA 3TORA 5K3HA 4WJYA 4FF3A 3OIBA 3PFDA 2XS8A 5GJVE 3Q0AA 1PK0A 3UBRA 3BNFA 4JIOA 2R0NA 4N5FA 2PG0A 4KSAA 1R3BA 4W9UA 2CJ7A 3DJLA 2VR0A 2RFQA 4L38A 5M4KA 3CRLA 2J7AA 5GJWE 2CX9A 2JBTA 3P4TA 5J71A 1GKZA 1XFUA 3C2PA 1XFWA 2CJ5A 1SK6A 2XQRB 4L3YA 5EZ3A 1RJ1A 4FF4A 2C12A 2HJNA 4Q17A 1FS7A 4MPEA 4Q5CA 2YYMA 2FONA 3OWAA 2REHA 1IS2A 2Q8FA 4RM7A 2BU7A 3M9VA 1RJ4A 2GBBA 4LQSB 3X29A 3NF4A 2EBFX 2EBAA 4P13A 3SXQA 4IV6A 3MDEA 1OAHA 2YGWA 4V26A 4L1FA 2ZAFA 2IX6A 2ZKJA 3U33A 3FCJA 3CE2A 4HKRA 2AZEA 3EONA 2XS1A 5B5WA 5K3JA 1XG2B 4FZ4A 2JIFA 3S7WA 4KCFA 4NXLA 1K93A 2YYJA 3D2RA 3II9A 1Y8NA 3MMOA 4Q4UA 4Q1OA 2DDHA 5B5VA 1GKXA 3SF6A 5M4MA 4M9AA 1Y0VA 4AKIA 3CRKA 5K3GA 1U8VA 3MPIA 3L1TA 4MP2A 3D9EA 4P79A 1RX0A 3TZ5A 1UDYA 3TZ2A 5M4NA 4FF2A 4AI6A 3UU9A 2Q8HA 3Q22A 4X28A 4H81A 1XFVA 2OJQA 1EGDA 4L3XA 2RF7A 2EC5A 1X90A 3TZ4A 4F0XA 3BNGA 1W07A 3C46A 1UKWA
chains in the Genus database with same CATH topology
2IX5A 2JBRA 3MKHA 1EGCA 2OT4A 3GNCA 2DVLA 4ZXVA 2A1TA 2OR0A 2R0MA 3BNHA 2E80A 2YYKA 1IVHA 3MPJA 3SWOA 3FO3A 4Q5BA 4X28C 3LG1A 3OWMA 3D6BA 4HR3A 2RDZA 3RKHA 3HWCA 3SCEA 2WBIA 4KTOA 1R2JA 2VIGA 3EOMA 3F29A 2C0UA 1GU6A 4ZYJA 1FS9A 2ZO5A 3GM6A 1QDBA 3R7KA 3BNJA 3GQTA 4XVXA 3X0YA 2JBSA 2D29A 3D9GA 3LGQA 3AFFA 4Q0TA 2E81A 1JQIA 3TTBA 4U83A 3B96A 2YYLA 4G5EA 4L3ZA 1EGEA 4OO2A 1WS9A 1FS8A 1T9GA 3MXLA 4DOYA 1BUCA 3AFEA 1SIQA 4JEKA 4IRNA 3D1IA 1SIRA 3D9FA 2YYIA 2UXWA 3D9DA 3MDDA 4O5MA 3X0XA 5K3IA 2Z1QA 2YYGA 3TORA 5K3HA 4WJYA 3OIBA 3PFDA 3UBRA 3BNFA 2R0NA 4N5FA 2PG0A 4W9UA 2VR0A 2RFQA 4L38A 2J7AA 2CX9A 2JBTA 3P4TA 4L3YA 2C12A 4Q17A 1FS7A 4Q5CA 2YYMA 2FONA 3OWAA 2REHA 1IS2A 4RM7A 3M9VA 3NF4A 2EBAA 4P13A 3SXQA 4IV6A 3MDEA 1OAHA 4L1FA 2ZAFA 2IX6A 3FCJA 3EONA 5K3JA 3S7WA 2JIFA 4KCFA 4NXLA 2YYJA 3II9A 3MMOA 4Q4UA 4Q1OA 2DDHA 3SF6A 4M9AA 5K3GA 1U8VA 3MPIA 3L1TA 3D9EA 1RX0A 1UDYA 3UU9A 4X28A 1EGDA 4L3XA 2RF7A 3BNGA 1W07A 1UKWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2IX5 A;  2JBR A;  3MKH A;  1EGC A;  2OT4 A;  3GNC A;  2DVL A;  4ZXV A;  2A1T A;  2OR0 A;  2R0M A;  3BNH A;  2E80 A;  2YYK A;  1IVH A;  3MPJ A;  3SWO A;  3FO3 A;  4Q5B A;  4X28 C;  3LG1 A;  3OWM A;  3D6B A;  4HR3 A;  2RDZ A;  3RKH A;  3HWC A;  3SCE A;  2WBI A;  4KTO A;  1R2J A;  2VIG A;  3EOM A;  3F29 A;  2C0U A;  1GU6 A;  4ZYJ A;  1FS9 A;  2ZO5 A;  3GM6 A;  1QDB A;  3R7K A;  3BNJ A;  3GQT A;  4XVX A;  3X0Y A;  2JBS A;  2D29 A;  3D9G A;  3LGQ A;  3AFF A;  4Q0T A;  2E81 A;  1JQI A;  3TTB A;  4U83 A;  3B96 A;  2YYL A;  4G5E A;  4L3Z A;  1EGE A;  4OO2 A;  1WS9 A;  1FS8 A;  1T9G A;  3MXL A;  4DOY A;  1BUC A;  3AFE A;  1SIQ A;  4JEK A;  4IRN A;  3D1I A;  1SIR A;  3D9F A;  2YYI A;  2UXW A;  3D9D A;  3MDD A;  4O5M A;  3X0X A;  5K3I A;  2Z1Q A;  2YYG A;  3TOR A;  5K3H A;  4WJY A;  3OIB A;  3PFD A;  3UBR A;  3BNF A;  2R0N A;  4N5F A;  2PG0 A;  4W9U A;  2VR0 A;  2RFQ A;  4L38 A;  2J7A A;  2CX9 A;  2JBT A;  3P4T A;  4L3Y A;  2C12 A;  4Q17 A;  1FS7 A;  4Q5C A;  2YYM A;  2FON A;  3OWA A;  2REH A;  1IS2 A;  4RM7 A;  3M9V A;  3NF4 A;  2EBA A;  4P13 A;  3SXQ A;  4IV6 A;  3MDE A;  1OAH A;  4L1F A;  2ZAF A;  2IX6 A;  3FCJ A;  3EON A;  5K3J A;  3S7W A;  2JIF A;  4KCF A;  4NXL A;  2YYJ A;  3II9 A;  3MMO A;  4Q4U A;  4Q1O A;  2DDH A;  3SF6 A;  4M9A A;  5K3G A;  1U8V A;  3MPI A;  3L1T A;  3D9E A;  1RX0 A;  1UDY A;  3UU9 A;  4X28 A;  1EGD A;  4L3X A;  2RF7 A;  3BNG A;  1W07 A;  1UKW A; 
#chains in the Genus database with same CATH topology
 2IX5 A;  2JBR A;  4MP7 A;  3MKH A;  1EGC A;  2BU2 A;  2OT4 A;  3GNC A;  2DVL A;  1X8Z A;  3TZ0 A;  4ZXV A;  2A1T A;  2OR0 A;  2R0M A;  1PI1 A;  2E0A A;  2E80 A;  2OEX A;  2YYK A;  3BNH A;  4G97 A;  1IVH A;  2AO2 A;  4DZY A;  4E01 A;  3Q24 A;  1XFZ A;  3MPJ A;  4MPC A;  2ZDY A;  4FF1 A;  2EBH X;  3SWO A;  3FO3 A;  4Q5B A;  4X28 C;  1K90 A;  4LQQ B;  1JM6 A;  3LG1 A;  3OWM A;  3D6B A;  3N0R A;  2Q8I A;  4HR3 A;  2RDZ A;  3RKH A;  3HWC A;  3SCE A;  2WBI A;  3C3L A;  4KTO A;  2R03 A;  4E02 A;  3VAD A;  1R2J A;  2FP1 A;  2VIG A;  3EOM A;  1SC5 A;  2BU8 A;  2C0U A;  1GU6 A;  4ZYJ A;  1FS9 A;  2ZO5 A;  3F29 A;  1X91 A;  3GM6 A;  4AKG A;  1QDB A;  3R7K A;  4J1V A;  3VKH A;  3BNJ A;  3KML A;  3GQT A;  2FP2 A;  4XVX A;  1K8T A;  4V25 A;  2R05 A;  2Q8G A;  3X0Y A;  2JBS A;  2D29 A;  3D9G A;  1GJV A;  3LGQ A;  5B6B A;  1RP3 A;  2VF1 A;  3AFF A;  2PNR A;  2E81 A;  4KS9 A;  1JQI A;  4Q0T A;  4U83 A;  3B96 A;  1S26 A;  4QIC A;  2YYL A;  4G5E A;  4L3Z A;  3TTB A;  2BU5 A;  1EGE A;  4OO2 A;  4AKH A;  1WS9 A;  4E00 A;  2PO4 A;  2R02 A;  1FS8 A;  5M4P A;  1T9G A;  3MXL A;  4DOY A;  1BUC A;  3AFE A;  2BU6 A;  1SIQ A;  2CJ4 A;  2CJ8 A;  4HKS A;  4JEK A;  4KSF A;  4IRN A;  5BRK A;  5J6A A;  4H7Q A;  3D1I A;  4H85 A;  3Q23 A;  1SIR A;  3D9F A;  4JIZ A;  2LFW A;  2YYI A;  2QR4 A;  2ZDX A;  5BRM A;  2UXW A;  3D9D A;  1XFX A;  1Y8O A;  1LVC A;  4MPN A;  3MDD A;  4O5M A;  3X0X A;  1Y8P A;  2F6L A;  5K3I A;  2BTZ A;  2Z1Q A;  2YYG A;  2CJ6 A;  2OEV A;  3VKG A;  1XFY A;  3TOR A;  5K3H A;  4WJY A;  4FF3 A;  3OIB A;  3PFD A;  2XS8 A;  5GJV E;  3Q0A A;  1PK0 A;  3UBR A;  3BNF A;  4JIO A;  2R0N A;  4N5F A;  2PG0 A;  4KSA A;  1R3B A;  4W9U A;  2CJ7 A;  3DJL A;  2VR0 A;  2RFQ A;  4L38 A;  5M4K A;  3CRL A;  2J7A A;  5GJW E;  2CX9 A;  2JBT A;  3P4T A;  5J71 A;  1GKZ A;  1XFU A;  3C2P A;  1XFW A;  2CJ5 A;  1SK6 A;  2XQR B;  4L3Y A;  5EZ3 A;  1RJ1 A;  4FF4 A;  2C12 A;  2HJN A;  4Q17 A;  1FS7 A;  4MPE A;  4Q5C A;  2YYM A;  2FON A;  3OWA A;  2REH A;  1IS2 A;  2Q8F A;  4RM7 A;  2BU7 A;  3M9V A;  1RJ4 A;  2GBB A;  4LQS B;  3X29 A;  3NF4 A;  2EBF X;  2EBA A;  4P13 A;  3SXQ A;  4IV6 A;  3MDE A;  1OAH A;  2YGW A;  4V26 A;  4L1F A;  2ZAF A;  2IX6 A;  2ZKJ A;  3U33 A;  3FCJ A;  3CE2 A;  4HKR A;  2AZE A;  3EON A;  2XS1 A;  5B5W A;  5K3J A;  1XG2 B;  4FZ4 A;  2JIF A;  3S7W A;  4KCF A;  4NXL A;  1K93 A;  2YYJ A;  3D2R A;  3II9 A;  1Y8N A;  3MMO A;  4Q4U A;  4Q1O A;  2DDH A;  5B5V A;  1GKX A;  3SF6 A;  5M4M A;  4M9A A;  1Y0V A;  4AKI A;  3CRK A;  5K3G A;  1U8V A;  3MPI A;  3L1T A;  4MP2 A;  3D9E A;  4P79 A;  1RX0 A;  3TZ5 A;  1UDY A;  3TZ2 A;  5M4N A;  4FF2 A;  4AI6 A;  3UU9 A;  2Q8H A;  3Q22 A;  4X28 A;  4H81 A;  1XFV A;  2OJQ A;  1EGD A;  4L3X A;  2RF7 A;  2EC5 A;  1X90 A;  3TZ4 A;  4F0X A;  3BNG A;  1W07 A;  3C46 A;  1UKW A; 
#chains in the Genus database with same CATH homology
 2IX5 A;  2JBR A;  3MKH A;  1EGC A;  2OT4 A;  3GNC A;  2DVL A;  4ZXV A;  2A1T A;  2OR0 A;  2R0M A;  3BNH A;  2E80 A;  2YYK A;  1IVH A;  3MPJ A;  3SWO A;  3FO3 A;  4Q5B A;  4X28 C;  3LG1 A;  3OWM A;  3D6B A;  4HR3 A;  2RDZ A;  3RKH A;  3HWC A;  3SCE A;  2WBI A;  4KTO A;  1R2J A;  2VIG A;  3EOM A;  3F29 A;  2C0U A;  1GU6 A;  4ZYJ A;  1FS9 A;  2ZO5 A;  3GM6 A;  1QDB A;  3R7K A;  3BNJ A;  3GQT A;  4XVX A;  3X0Y A;  2JBS A;  2D29 A;  3D9G A;  3LGQ A;  3AFF A;  4Q0T A;  2E81 A;  1JQI A;  3TTB A;  4U83 A;  3B96 A;  2YYL A;  4G5E A;  4L3Z A;  1EGE A;  4OO2 A;  1WS9 A;  1FS8 A;  1T9G A;  3MXL A;  4DOY A;  1BUC A;  3AFE A;  1SIQ A;  4JEK A;  4IRN A;  3D1I A;  1SIR A;  3D9F A;  2YYI A;  2UXW A;  3D9D A;  3MDD A;  4O5M A;  3X0X A;  5K3I A;  2Z1Q A;  2YYG A;  3TOR A;  5K3H A;  4WJY A;  3OIB A;  3PFD A;  3UBR A;  3BNF A;  2R0N A;  4N5F A;  2PG0 A;  4W9U A;  2VR0 A;  2RFQ A;  4L38 A;  2J7A A;  2CX9 A;  2JBT A;  3P4T A;  4L3Y A;  2C12 A;  4Q17 A;  1FS7 A;  4Q5C A;  2YYM A;  2FON A;  3OWA A;  2REH A;  1IS2 A;  4RM7 A;  3M9V A;  3NF4 A;  2EBA A;  4P13 A;  3SXQ A;  4IV6 A;  3MDE A;  1OAH A;  4L1F A;  2ZAF A;  2IX6 A;  3FCJ A;  3EON A;  5K3J A;  3S7W A;  2JIF A;  4KCF A;  4NXL A;  2YYJ A;  3II9 A;  3MMO A;  4Q4U A;  4Q1O A;  2DDH A;  3SF6 A;  4M9A A;  5K3G A;  1U8V A;  3MPI A;  3L1T A;  3D9E A;  1RX0 A;  1UDY A;  3UU9 A;  4X28 A;  1EGD A;  4L3X A;  2RF7 A;  3BNG A;  1W07 A;  1UKW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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