1W07A

Arabidopsis thaliana acyl-coa oxidase 1
Total Genus 269
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
269
sequence length
658
structure length
655
Chain Sequence
EGIDHLADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSRKELFKSTLRKCAHAFKRIIELRLNEEEAGRLRHFIDQPAYVDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHLLQCRSGVQKAEDWLNPDVVLEAFEARALRMAVTCAKNLSKFENQEQGFQELLADLVEAAIAHCQLIVVSKFIAKLEQDIGGKGVKKQLNNLCYIYALYLLHKHLGDFLSTNCITPKQASLANDQLRSLYTQVRPNAVALVDAFNYTDHYLNSVLGRYDGNVYPKLFEEALKDPLNDSVVPDGYQEYLRPVLQQQL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords ACYL-COA OXIDASE
publication title Acyl-Coa Oxidase 1 from Arabidopsis Thaliana. Structure of a Key Enzyme in Plant Lipid Metabolism
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 269
structure length 655
sequence length 658
chains with identical sequence B
ec nomenclature ec 1.3.3.6: Acyl-CoA oxidase.
pdb deposition date 2004-06-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01756 ACOX Acyl-CoA oxidase
A PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain
A PF14749 Acyl-CoA_ox_N Acyl-coenzyme A oxidase N-terminal
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 1w07A01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 1w07A03
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 1w07A04
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 1w07A02
2YYLA 2R0NA 4IV6A 4P13A 3UU9A 1FS8A 4O5MA 2ZAFA 4X28C 4U83A 1WS9A 3GNCA 4L3YA 4JEKA 3SWOA 3SXQA 3FCJA 3R7KA 3TTBA 2WBIA 5K3HA 2J7AA 4HR3A 3X0YA 2D29A 3MKHA 3MDEA 3EONA 2RFQA 3BNJA 2Z1QA 2IX5A 1FS7A 4G5EA 2OR0A 3LGQA 2YYMA 2YYIA 1SIQA 3NF4A 1EGEA 1UKWA 2YYKA 3II9A 2VIGA 3MXLA 2C12A 3OWMA 3TORA 4X28A 1EGDA 1W07A 1SIRA 3S7WA 3AFFA 4L3XA 4ZYJA 3D9DA 4Q0TA 1T9GA 1IS2A 1RX0A 1R2JA 3RKHA 3GQTA 4N5FA 1IVHA 2ZO5A 4ZXVA 5K3IA 3L1TA 2A1TA 2UXWA 3PFDA 3MDDA 2E80A 2IX6A 2REHA 4L1FA 4Q17A 4L38A 4L3ZA 3D9GA 1OAHA 4Q4UA 1EGCA 2JBSA 3X0XA 2R0MA 3D6BA 2YYJA 3D9FA 3EOMA 4RM7A 3SF6A 2VR0A 4Q5BA 2JBTA 4NXLA 1GU6A 2EBAA 3OWAA 5K3JA 2C0UA 2OT4A 3D1IA 2DVLA 1QDBA 1FS9A 3F29A 3M9VA 3GM6A 4KTOA 2CX9A 3AFEA 4Q1OA 3BNGA 4OO2A 2JBRA 2E81A 3HWCA 3SCEA 2JIFA 3BNHA 4IRNA 2RF7A 3OIBA 1U8VA 2PG0A 3FO3A 1JQIA 4WJYA 1UDYA 1BUCA 3MMOA 2FONA 3MPIA 4DOYA 4W9UA 3UBRA 3B96A 3P4TA 4M9AA 3LG1A 4XVXA 5K3GA 2DDHA 3BNFA 4KCFA 4Q5CA 2YYGA 3D9EA 3MPJA 2RDZA
chains in the Genus database with same CATH superfamily
2PO4A 3TZ4A 2YYLA 2R0NA 4IV6A 4AKGA 1LVCA 4FF2A 3DJLA 4P13A 1XFXA 2CJ5A 3UU9A 2OEXA 1FS8A 4E02A 4E01A 4MPCA 3Q0AA 4O5MA 2ZAFA 2BU5A 3D2RA 4X28C 4U83A 1WS9A 3GNCA 4L3YA 4AI6A 2F6LA 4JEKA 4QICA 5M4PA 3SWOA 3SXQA 4JIOA 1R3BA 3FCJA 4MPNA 3R7KA 3KMLA 1XFUA 3TTBA 2WBIA 5K3HA 5EZ3A 4H7QA 2J7AA 4HR3A 3X0YA 1K93A 1SC5A 2D29A 5M4NA 3MKHA 3MDEA 2Q8GA 1PI1A 3EONA 3TZ2A 1PK0A 2RFQA 3BNJA 1RJ4A 2Z1QA 2IX5A 4V25A 1FS7A 4G5EA 3C2PA 2OR0A 2BU2A 2ZDXA 2YYMA 2YYIA 3LGQA 4FZ4A 4DZYA 1SIQA 3N0RA 2CJ6A 2EC5A 2PNRA 1X8ZA 5BRMA 3NF4A 1EGEA 1UKWA 1Y8OA 2OEVA 1JM6A 2YYKA 5GJVE 4LQSB 3II9A 2VIGA 3MXLA 2C12A 3OWMA 4H81A 3TORA 4X28A 3CRLA 4LQQB 1SK6A 4G97A 1EGDA 4FF4A 1W07A 1SIRA 3S7WA 3AFFA 4L3XA 4ZYJA 4HKSA 1XFWA 4MP2A 3TZ0A 4FF3A 3Q23A 3D9DA 1RJ1A 2ZDYA 4Q0TA 1T9GA 2Q8IA 3X29A 1IS2A 1RX0A 2AZEA 3U33A 1R2JA 2CJ4A 3RKHA 3GQTA 4N5FA 1IVHA 2R03A 5GJWE 2ZO5A 4ZXVA 5K3IA 3Q24A 1GKZA 3L1TA 2VF1A 2XS8A 1GKXA 2BTZA 2A1TA 2UXWA 3PFDA 3MDDA 4KSFA 4MPEA 2E80A 2IX6A 4V26A 2EBFX 2REHA 4L1FA 1XFZA 4Q17A 2QR4A 4L38A 4L3ZA 3D9GA 1OAHA 2BU6A 2LFWA 4Q4UA 1XFVA 1EGCA 2JBSA 3X0XA 2R0MA 2ZKJA 3VADA 5B6BA 3D6BA 2Q8FA 2FP1A 1GJVA 2CJ8A 2YYJA 3D9FA 3EOMA 4RM7A 3SF6A 2BU8A 2VR0A 2XS1A 2GBBA 4Q5BA 2JBTA 4NXLA 1GU6A 3C46A 2EBAA 2YGWA 2Q8HA 3OWAA 4AKHA 5K3JA 2C0UA 2OT4A 3D1IA 2R02A 4FF1A 2DVLA 3CE2A 1Y0VA 5J6AA 2FP2A 1Y8NA 5M4KA 1QDBA 5B5WA 1FS9A 1S26A 3F29A 3TZ5A 3M9VA 4J1VA 3GM6A 4KTOA 4F0XA 2CX9A 3AFEA 4Q1OA 3VKHA 2AO2A 1X91A 2CJ7A 3BNGA 2OJQA 4OO2A 3CRKA 2BU7A 2JBRA 2E81A 3HWCA 2HJNA 2JIFA 1RP3A 4JIZA 3SCEA 3Q22A 3BNHA 4IRNA 2RF7A 3OIBA 4P79A 1XFYA 1U8VA 2PG0A 3FO3A 1JQIA 4WJYA 1UDYA 1BUCA 3MMOA 2FONA 3MPIA 4H85A 4KS9A 4KSAA 4DOYA 2R05A 5B5VA 3VKGA 4W9UA 3UBRA 1K90A 3B96A 3P4TA 1X90A 4E00A 4M9AA 2E0AA 3LG1A 4HKRA 4XVXA 5J71A 2EBHX 5K3GA 2DDHA 3BNFA 4KCFA 4Q5CA 3C3LA 5M4MA 1XG2B 4AKIA 2YYGA 3D9EA 4MP7A 3MPJA 5BRKA 2XQRB 2RDZA 1Y8PA 1K8TA
chains in the Genus database with same CATH topology
2YYLA 2R0NA 4IV6A 4P13A 3UU9A 1FS8A 4O5MA 2ZAFA 4X28C 4U83A 1WS9A 3GNCA 4L3YA 4JEKA 3SWOA 3SXQA 3FCJA 3R7KA 3TTBA 2WBIA 5K3HA 2J7AA 4HR3A 3X0YA 2D29A 3MKHA 3MDEA 3EONA 2RFQA 3BNJA 2Z1QA 2IX5A 1FS7A 4G5EA 2OR0A 3LGQA 2YYMA 2YYIA 1SIQA 3NF4A 1EGEA 1UKWA 2YYKA 3II9A 2VIGA 3MXLA 2C12A 3OWMA 3TORA 4X28A 1EGDA 1W07A 1SIRA 3S7WA 3AFFA 4L3XA 4ZYJA 3D9DA 4Q0TA 1T9GA 1IS2A 1RX0A 1R2JA 3RKHA 3GQTA 4N5FA 1IVHA 2ZO5A 4ZXVA 5K3IA 3L1TA 2A1TA 2UXWA 3PFDA 3MDDA 2E80A 2IX6A 2REHA 4L1FA 4Q17A 4L38A 4L3ZA 3D9GA 1OAHA 4Q4UA 1EGCA 2JBSA 3X0XA 2R0MA 3D6BA 2YYJA 3D9FA 3EOMA 4RM7A 3SF6A 2VR0A 4Q5BA 2JBTA 4NXLA 1GU6A 2EBAA 3OWAA 5K3JA 2C0UA 2OT4A 3D1IA 2DVLA 1QDBA 1FS9A 3F29A 3M9VA 3GM6A 4KTOA 2CX9A 3AFEA 4Q1OA 3BNGA 4OO2A 2JBRA 2E81A 3HWCA 3SCEA 2JIFA 3BNHA 4IRNA 2RF7A 3OIBA 1U8VA 2PG0A 3FO3A 1JQIA 4WJYA 1UDYA 1BUCA 3MMOA 2FONA 3MPIA 4DOYA 4W9UA 3UBRA 3B96A 3P4TA 4M9AA 3LG1A 4XVXA 5K3GA 2DDHA 3BNFA 4KCFA 4Q5CA 2YYGA 3D9EA 3MPJA 2RDZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2YYL A;  2R0N A;  4IV6 A;  4P13 A;  3UU9 A;  1FS8 A;  4O5M A;  2ZAF A;  4X28 C;  4U83 A;  1WS9 A;  3GNC A;  4L3Y A;  4JEK A;  3SWO A;  3SXQ A;  3FCJ A;  3R7K A;  3TTB A;  2WBI A;  5K3H A;  2J7A A;  4HR3 A;  3X0Y A;  2D29 A;  3MKH A;  3MDE A;  3EON A;  2RFQ A;  3BNJ A;  2Z1Q A;  2IX5 A;  1FS7 A;  4G5E A;  2OR0 A;  3LGQ A;  2YYM A;  2YYI A;  1SIQ A;  3NF4 A;  1EGE A;  1UKW A;  2YYK A;  3II9 A;  2VIG A;  3MXL A;  2C12 A;  3OWM A;  3TOR A;  4X28 A;  1EGD A;  1W07 A;  1SIR A;  3S7W A;  3AFF A;  4L3X A;  4ZYJ A;  3D9D A;  4Q0T A;  1T9G A;  1IS2 A;  1RX0 A;  1R2J A;  3RKH A;  3GQT A;  4N5F A;  1IVH A;  2ZO5 A;  4ZXV A;  5K3I A;  3L1T A;  2A1T A;  2UXW A;  3PFD A;  3MDD A;  2E80 A;  2IX6 A;  2REH A;  4L1F A;  4Q17 A;  4L38 A;  4L3Z A;  3D9G A;  1OAH A;  4Q4U A;  1EGC A;  2JBS A;  3X0X A;  2R0M A;  3D6B A;  2YYJ A;  3D9F A;  3EOM A;  4RM7 A;  3SF6 A;  2VR0 A;  4Q5B A;  2JBT A;  4NXL A;  1GU6 A;  2EBA A;  3OWA A;  5K3J A;  2C0U A;  2OT4 A;  3D1I A;  2DVL A;  1QDB A;  1FS9 A;  3F29 A;  3M9V A;  3GM6 A;  4KTO A;  2CX9 A;  3AFE A;  4Q1O A;  3BNG A;  4OO2 A;  2JBR A;  2E81 A;  3HWC A;  3SCE A;  2JIF A;  3BNH A;  4IRN A;  2RF7 A;  3OIB A;  1U8V A;  2PG0 A;  3FO3 A;  1JQI A;  4WJY A;  1UDY A;  1BUC A;  3MMO A;  2FON A;  3MPI A;  4DOY A;  4W9U A;  3UBR A;  3B96 A;  3P4T A;  4M9A A;  3LG1 A;  4XVX A;  5K3G A;  2DDH A;  3BNF A;  4KCF A;  4Q5C A;  2YYG A;  3D9E A;  3MPJ A;  2RDZ A; 
#chains in the Genus database with same CATH topology
 2PO4 A;  3TZ4 A;  2YYL A;  2R0N A;  4IV6 A;  4AKG A;  1LVC A;  4FF2 A;  3DJL A;  4P13 A;  1XFX A;  2CJ5 A;  3UU9 A;  2OEX A;  1FS8 A;  4E02 A;  4E01 A;  4MPC A;  3Q0A A;  4O5M A;  2ZAF A;  2BU5 A;  3D2R A;  4X28 C;  4U83 A;  1WS9 A;  3GNC A;  4L3Y A;  4AI6 A;  2F6L A;  4JEK A;  4QIC A;  5M4P A;  3SWO A;  3SXQ A;  4JIO A;  1R3B A;  3FCJ A;  4MPN A;  3R7K A;  3KML A;  1XFU A;  3TTB A;  2WBI A;  5K3H A;  5EZ3 A;  4H7Q A;  2J7A A;  4HR3 A;  3X0Y A;  1K93 A;  1SC5 A;  2D29 A;  5M4N A;  3MKH A;  3MDE A;  2Q8G A;  1PI1 A;  3EON A;  3TZ2 A;  1PK0 A;  2RFQ A;  3BNJ A;  1RJ4 A;  2Z1Q A;  2IX5 A;  4V25 A;  1FS7 A;  4G5E A;  3C2P A;  2OR0 A;  2BU2 A;  2ZDX A;  2YYM A;  2YYI A;  3LGQ A;  4FZ4 A;  4DZY A;  1SIQ A;  3N0R A;  2CJ6 A;  2EC5 A;  2PNR A;  1X8Z A;  5BRM A;  3NF4 A;  1EGE A;  1UKW A;  1Y8O A;  2OEV A;  1JM6 A;  2YYK A;  5GJV E;  4LQS B;  3II9 A;  2VIG A;  3MXL A;  2C12 A;  3OWM A;  4H81 A;  3TOR A;  4X28 A;  3CRL A;  4LQQ B;  1SK6 A;  4G97 A;  1EGD A;  4FF4 A;  1W07 A;  1SIR A;  3S7W A;  3AFF A;  4L3X A;  4ZYJ A;  4HKS A;  1XFW A;  4MP2 A;  3TZ0 A;  4FF3 A;  3Q23 A;  3D9D A;  1RJ1 A;  2ZDY A;  4Q0T A;  1T9G A;  2Q8I A;  3X29 A;  1IS2 A;  1RX0 A;  2AZE A;  3U33 A;  1R2J A;  2CJ4 A;  3RKH A;  3GQT A;  4N5F A;  1IVH A;  2R03 A;  5GJW E;  2ZO5 A;  4ZXV A;  5K3I A;  3Q24 A;  1GKZ A;  3L1T A;  2VF1 A;  2XS8 A;  1GKX A;  2BTZ A;  2A1T A;  2UXW A;  3PFD A;  3MDD A;  4KSF A;  4MPE A;  2E80 A;  2IX6 A;  4V26 A;  2EBF X;  2REH A;  4L1F A;  1XFZ A;  4Q17 A;  2QR4 A;  4L38 A;  4L3Z A;  3D9G A;  1OAH A;  2BU6 A;  2LFW A;  4Q4U A;  1XFV A;  1EGC A;  2JBS A;  3X0X A;  2R0M A;  2ZKJ A;  3VAD A;  5B6B A;  3D6B A;  2Q8F A;  2FP1 A;  1GJV A;  2CJ8 A;  2YYJ A;  3D9F A;  3EOM A;  4RM7 A;  3SF6 A;  2BU8 A;  2VR0 A;  2XS1 A;  2GBB A;  4Q5B A;  2JBT A;  4NXL A;  1GU6 A;  3C46 A;  2EBA A;  2YGW A;  2Q8H A;  3OWA A;  4AKH A;  5K3J A;  2C0U A;  2OT4 A;  3D1I A;  2R02 A;  4FF1 A;  2DVL A;  3CE2 A;  1Y0V A;  5J6A A;  2FP2 A;  1Y8N A;  5M4K A;  1QDB A;  5B5W A;  1FS9 A;  1S26 A;  3F29 A;  3TZ5 A;  3M9V A;  4J1V A;  3GM6 A;  4KTO A;  4F0X A;  2CX9 A;  3AFE A;  4Q1O A;  3VKH A;  2AO2 A;  1X91 A;  2CJ7 A;  3BNG A;  2OJQ A;  4OO2 A;  3CRK A;  2BU7 A;  2JBR A;  2E81 A;  3HWC A;  2HJN A;  2JIF A;  1RP3 A;  4JIZ A;  3SCE A;  3Q22 A;  3BNH A;  4IRN A;  2RF7 A;  3OIB A;  4P79 A;  1XFY A;  1U8V A;  2PG0 A;  3FO3 A;  1JQI A;  4WJY A;  1UDY A;  1BUC A;  3MMO A;  2FON A;  3MPI A;  4H85 A;  4KS9 A;  4KSA A;  4DOY A;  2R05 A;  5B5V A;  3VKG A;  4W9U A;  3UBR A;  1K90 A;  3B96 A;  3P4T A;  1X90 A;  4E00 A;  4M9A A;  2E0A A;  3LG1 A;  4HKR A;  4XVX A;  5J71 A;  2EBH X;  5K3G A;  2DDH A;  3BNF A;  4KCF A;  4Q5C A;  3C3L A;  5M4M A;  1XG2 B;  4AKI A;  2YYG A;  3D9E A;  4MP7 A;  3MPJ A;  5BRK A;  2XQR B;  2RDZ A;  1Y8P A;  1K8T A; 
#chains in the Genus database with same CATH homology
 2YYL A;  2R0N A;  4IV6 A;  4P13 A;  3UU9 A;  1FS8 A;  4O5M A;  2ZAF A;  4X28 C;  4U83 A;  1WS9 A;  3GNC A;  4L3Y A;  4JEK A;  3SWO A;  3SXQ A;  3FCJ A;  3R7K A;  3TTB A;  2WBI A;  5K3H A;  2J7A A;  4HR3 A;  3X0Y A;  2D29 A;  3MKH A;  3MDE A;  3EON A;  2RFQ A;  3BNJ A;  2Z1Q A;  2IX5 A;  1FS7 A;  4G5E A;  2OR0 A;  3LGQ A;  2YYM A;  2YYI A;  1SIQ A;  3NF4 A;  1EGE A;  1UKW A;  2YYK A;  3II9 A;  2VIG A;  3MXL A;  2C12 A;  3OWM A;  3TOR A;  4X28 A;  1EGD A;  1W07 A;  1SIR A;  3S7W A;  3AFF A;  4L3X A;  4ZYJ A;  3D9D A;  4Q0T A;  1T9G A;  1IS2 A;  1RX0 A;  1R2J A;  3RKH A;  3GQT A;  4N5F A;  1IVH A;  2ZO5 A;  4ZXV A;  5K3I A;  3L1T A;  2A1T A;  2UXW A;  3PFD A;  3MDD A;  2E80 A;  2IX6 A;  2REH A;  4L1F A;  4Q17 A;  4L38 A;  4L3Z A;  3D9G A;  1OAH A;  4Q4U A;  1EGC A;  2JBS A;  3X0X A;  2R0M A;  3D6B A;  2YYJ A;  3D9F A;  3EOM A;  4RM7 A;  3SF6 A;  2VR0 A;  4Q5B A;  2JBT A;  4NXL A;  1GU6 A;  2EBA A;  3OWA A;  5K3J A;  2C0U A;  2OT4 A;  3D1I A;  2DVL A;  1QDB A;  1FS9 A;  3F29 A;  3M9V A;  3GM6 A;  4KTO A;  2CX9 A;  3AFE A;  4Q1O A;  3BNG A;  4OO2 A;  2JBR A;  2E81 A;  3HWC A;  3SCE A;  2JIF A;  3BNH A;  4IRN A;  2RF7 A;  3OIB A;  1U8V A;  2PG0 A;  3FO3 A;  1JQI A;  4WJY A;  1UDY A;  1BUC A;  3MMO A;  2FON A;  3MPI A;  4DOY A;  4W9U A;  3UBR A;  3B96 A;  3P4T A;  4M9A A;  3LG1 A;  4XVX A;  5K3G A;  2DDH A;  3BNF A;  4KCF A;  4Q5C A;  2YYG A;  3D9E A;  3MPJ A;  2RDZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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