1W07A

Arabidopsis thaliana acyl-coa oxidase 1
Total Genus 269
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
269
sequence length
658
structure length
655
Chain Sequence
EGIDHLADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSRKELFKSTLRKCAHAFKRIIELRLNEEEAGRLRHFIDQPAYVDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHLLQCRSGVQKAEDWLNPDVVLEAFEARALRMAVTCAKNLSKFENQEQGFQELLADLVEAAIAHCQLIVVSKFIAKLEQDIGGKGVKKQLNNLCYIYALYLLHKHLGDFLSTNCITPKQASLANDQLRSLYTQVRPNAVALVDAFNYTDHYLNSVLGRYDGNVYPKLFEEALKDPLNDSVVPDGYQEYLRPVLQQQL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords ACYL-COA OXIDASE
publication title Acyl-Coa Oxidase 1 from Arabidopsis Thaliana. Structure of a Key Enzyme in Plant Lipid Metabolism
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 269
structure length 655
sequence length 658
chains with identical sequence B
ec nomenclature ec 1.3.3.6: Acyl-CoA oxidase.
pdb deposition date 2004-06-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01756 ACOX Acyl-CoA oxidase
A PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain
A PF14749 Acyl-CoA_ox_N Acyl-coenzyme A oxidase N-terminal
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 1w07A01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 1w07A03
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 1w07A04
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 1w07A02
4Q5CA 3X0YA 4L3YA 4L3XA 4ZXVA 3MMOA 2ZAFA 1EGDA 3SCEA 2E80A 3MXLA 2E81A 1RX0A 1GU6A 3D9EA 3HWCA 2YYJA 3X0XA 4DOYA 1IVHA 2OR0A 3SXQA 1U8VA 3D1IA 3D9DA 2C12A 3MPJA 4L38A 4KTOA 2JBSA 3FCJA 3BNJA 4N5FA 2C0UA 1UKWA 4RM7A 1JQIA 4XVXA 3MKHA 2UXWA 3EONA 3BNFA 3MPIA 4IRNA 2VIGA 2RDZA 4Q5BA 4L3ZA 2Z1QA 2DVLA 3D6BA 4L1FA 3MDEA 3AFEA 1EGCA 2JIFA 1UDYA 1BUCA 3LGQA 2YYGA 4KCFA 2YYMA 3BNHA 3R7KA 3RKHA 2R0MA 4IV6A 1T9GA 3M9VA 2YYLA 3OIBA 4Q4UA 3II9A 1EGEA 1SIRA 2JBRA 3GQTA 3BNGA 2R0NA 3FO3A 5K3JA 1W07A 3EOMA 2YYKA 4X28C 3OWAA 4NXLA 1OAHA 4OO2A 3F29A 1R2JA 2REHA 3PFDA 3SWOA 2EBAA 2CX9A 5K3IA 4Q17A 4JEKA 2FONA 2VR0A 3TTBA 4P13A 2IX5A 3LG1A 2RFQA 2J7AA 2RF7A 4U83A 3OWMA 3L1TA 4Q1OA 4HR3A 2D29A 3AFFA 4O5MA 4WJYA 3D9FA 3B96A 3GM6A 1QDBA 1FS8A 4M9AA 3UBRA 2PG0A 3P4TA 3D9GA 5K3GA 1WS9A 3SF6A 2OT4A 3GNCA 4X28A 1IS2A 3MDDA 2JBTA 2DDHA 4ZYJA 2YYIA 3S7WA 2WBIA 1FS7A 4Q0TA 3TORA 2ZO5A 2IX6A 3UU9A 1FS9A 3NF4A 4G5EA 4W9UA 1SIQA 2A1TA 5K3HA
chains in the Genus database with same CATH superfamily
4Q5CA 3X0YA 4L3YA 4L3XA 4ZXVA 2XQRB 3MMOA 2ZAFA 4KS9A 4KSAA 2FP2A 1EGDA 3SCEA 2E80A 3MXLA 4F0XA 1X8ZA 2OJQA 2CJ6A 4E01A 2BTZA 2E81A 5EZ3A 1XFVA 1K8TA 1RX0A 1GU6A 5B5VA 3D9EA 3HWCA 2YYJA 3X0XA 4DOYA 2CJ5A 1IVHA 2OR0A 1GJVA 2R05A 3SXQA 1U8VA 2BU7A 3D1IA 3D9DA 5J6AA 2C12A 3N0RA 3MPJA 4L38A 4KTOA 2JBSA 3FCJA 2FP1A 3Q0AA 5J71A 3BNJA 4N5FA 2C0UA 1UKWA 4RM7A 1S26A 2BU6A 2Q8HA 2R02A 1JQIA 4G97A 1SC5A 4XVXA 2OEVA 2AO2A 3TZ5A 3CRKA 3MKHA 2UXWA 3EONA 1Y8PA 3TZ2A 3BNFA 4AKGA 3MPIA 4IRNA 4QICA 4V26A 1XFZA 2VIGA 2EBFX 3D2RA 4H81A 2RDZA 4Q5BA 4LQSB 1Y8NA 4L3ZA 2Z1QA 2DVLA 3D6BA 5BRMA 4L1FA 3MDEA 2CJ7A 4J1VA 3AFEA 1EGCA 2JIFA 1UDYA 4E00A 5M4PA 1BUCA 3LGQA 1RJ1A 2YYGA 1R3BA 4MP2A 4V25A 4KCFA 4MPCA 2Q8GA 4E02A 2YYMA 3BNHA 1X90A 3R7KA 1GKZA 3RKHA 5GJWE 2PO4A 2R0MA 4IV6A 1T9GA 3M9VA 2YYLA 4H7QA 3OIBA 2BU8A 2VF1A 4FF3A 3U33A 2Q8FA 5B5WA 3TZ4A 4Q4UA 1Y0VA 3II9A 2CJ4A 1EGEA 1SIRA 1XFXA 2BU2A 2JBRA 4H85A 3GQTA 3BNGA 2R0NA 3FO3A 5K3JA 1W07A 1JM6A 2LFWA 3DJLA 2AZEA 2XS1A 2GBBA 3EOMA 3VADA 1PK0A 2YYKA 4X28C 1SK6A 3OWAA 1K90A 5BRKA 4NXLA 1X91A 4DZYA 4FF2A 4FF4A 1OAHA 2PNRA 3F29A 4OO2A 1R2JA 2REHA 2E0AA 4MPEA 2R03A 3PFDA 3KMLA 3SWOA 4HKSA 2Q8IA 2EBAA 2CX9A 5K3IA 4JIZA 4Q17A 4JEKA 1XFUA 4AI6A 2FONA 2VR0A 2YGWA 4P13A 2IX5A 3TTBA 2ZDYA 2XS8A 2RFQA 1RJ4A 2J7AA 4U83A 2QR4A 2RF7A 2HJNA 3LG1A 3OWMA 3TZ0A 3L1TA 4Q1OA 5GJVE 4HR3A 4FZ4A 1K93A 1XFWA 2OEXA 3Q24A 2D29A 3AFFA 4MP7A 2ZDXA 3C2PA 4O5MA 5M4KA 4WJYA 3D9FA 3B96A 3GM6A 1QDBA 1FS8A 4M9AA 2EBHX 1XG2B 2CJ8A 3UBRA 2PG0A 3P4TA 3D9GA 5K3GA 3VKHA 1WS9A 1XFYA 3SF6A 1GKXA 2BU5A 4JIOA 2OT4A 4HKRA 3GNCA 2ZKJA 3CRLA 5M4MA 1LVCA 4FF1A 3CE2A 4X28A 4P79A 1IS2A 3MDDA 3Q22A 3Q23A 2JBTA 2DDHA 4ZYJA 2YYIA 3S7WA 3C46A 4AKIA 5B6BA 2WBIA 1FS7A 1RP3A 4Q0TA 3C3LA 1PI1A 3TORA 3VKGA 2ZO5A 2IX6A 2EC5A 3UU9A 1FS9A 4MPNA 4LQQB 3X29A 3NF4A 2F6LA 4G5EA 5M4NA 4W9UA 4AKHA 4KSFA 1SIQA 2A1TA 5K3HA 1Y8OA
chains in the Genus database with same CATH topology
4Q5CA 3X0YA 4L3YA 4L3XA 4ZXVA 3MMOA 2ZAFA 1EGDA 3SCEA 2E80A 3MXLA 2E81A 1RX0A 1GU6A 3D9EA 3HWCA 2YYJA 3X0XA 4DOYA 1IVHA 2OR0A 3SXQA 1U8VA 3D1IA 3D9DA 2C12A 3MPJA 4L38A 4KTOA 2JBSA 3FCJA 3BNJA 4N5FA 2C0UA 1UKWA 4RM7A 1JQIA 4XVXA 3MKHA 2UXWA 3EONA 3BNFA 3MPIA 4IRNA 2VIGA 2RDZA 4Q5BA 4L3ZA 2Z1QA 2DVLA 3D6BA 4L1FA 3MDEA 3AFEA 1EGCA 2JIFA 1UDYA 1BUCA 3LGQA 2YYGA 4KCFA 2YYMA 3BNHA 3R7KA 3RKHA 2R0MA 4IV6A 1T9GA 3M9VA 2YYLA 3OIBA 4Q4UA 3II9A 1EGEA 1SIRA 2JBRA 3GQTA 3BNGA 2R0NA 3FO3A 5K3JA 1W07A 3EOMA 2YYKA 4X28C 3OWAA 4NXLA 1OAHA 4OO2A 3F29A 1R2JA 2REHA 3PFDA 3SWOA 2EBAA 2CX9A 5K3IA 4Q17A 4JEKA 2FONA 2VR0A 3TTBA 4P13A 2IX5A 3LG1A 2RFQA 2J7AA 2RF7A 4U83A 3OWMA 3L1TA 4Q1OA 4HR3A 2D29A 3AFFA 4O5MA 4WJYA 3D9FA 3B96A 3GM6A 1QDBA 1FS8A 4M9AA 3UBRA 2PG0A 3P4TA 3D9GA 5K3GA 1WS9A 3SF6A 2OT4A 3GNCA 4X28A 1IS2A 3MDDA 2JBTA 2DDHA 4ZYJA 2YYIA 3S7WA 2WBIA 1FS7A 4Q0TA 3TORA 2ZO5A 2IX6A 3UU9A 1FS9A 3NF4A 4G5EA 4W9UA 1SIQA 2A1TA 5K3HA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4Q5C A;  3X0Y A;  4L3Y A;  4L3X A;  4ZXV A;  3MMO A;  2ZAF A;  1EGD A;  3SCE A;  2E80 A;  3MXL A;  2E81 A;  1RX0 A;  1GU6 A;  3D9E A;  3HWC A;  2YYJ A;  3X0X A;  4DOY A;  1IVH A;  2OR0 A;  3SXQ A;  1U8V A;  3D1I A;  3D9D A;  2C12 A;  3MPJ A;  4L38 A;  4KTO A;  2JBS A;  3FCJ A;  3BNJ A;  4N5F A;  2C0U A;  1UKW A;  4RM7 A;  1JQI A;  4XVX A;  3MKH A;  2UXW A;  3EON A;  3BNF A;  3MPI A;  4IRN A;  2VIG A;  2RDZ A;  4Q5B A;  4L3Z A;  2Z1Q A;  2DVL A;  3D6B A;  4L1F A;  3MDE A;  3AFE A;  1EGC A;  2JIF A;  1UDY A;  1BUC A;  3LGQ A;  2YYG A;  4KCF A;  2YYM A;  3BNH A;  3R7K A;  3RKH A;  2R0M A;  4IV6 A;  1T9G A;  3M9V A;  2YYL A;  3OIB A;  4Q4U A;  3II9 A;  1EGE A;  1SIR A;  2JBR A;  3GQT A;  3BNG A;  2R0N A;  3FO3 A;  5K3J A;  1W07 A;  3EOM A;  2YYK A;  4X28 C;  3OWA A;  4NXL A;  1OAH A;  4OO2 A;  3F29 A;  1R2J A;  2REH A;  3PFD A;  3SWO A;  2EBA A;  2CX9 A;  5K3I A;  4Q17 A;  4JEK A;  2FON A;  2VR0 A;  3TTB A;  4P13 A;  2IX5 A;  3LG1 A;  2RFQ A;  2J7A A;  2RF7 A;  4U83 A;  3OWM A;  3L1T A;  4Q1O A;  4HR3 A;  2D29 A;  3AFF A;  4O5M A;  4WJY A;  3D9F A;  3B96 A;  3GM6 A;  1QDB A;  1FS8 A;  4M9A A;  3UBR A;  2PG0 A;  3P4T A;  3D9G A;  5K3G A;  1WS9 A;  3SF6 A;  2OT4 A;  3GNC A;  4X28 A;  1IS2 A;  3MDD A;  2JBT A;  2DDH A;  4ZYJ A;  2YYI A;  3S7W A;  2WBI A;  1FS7 A;  4Q0T A;  3TOR A;  2ZO5 A;  2IX6 A;  3UU9 A;  1FS9 A;  3NF4 A;  4G5E A;  4W9U A;  1SIQ A;  2A1T A;  5K3H A; 
#chains in the Genus database with same CATH topology
 4Q5C A;  3X0Y A;  4L3Y A;  4L3X A;  4ZXV A;  2XQR B;  3MMO A;  2ZAF A;  4KS9 A;  4KSA A;  2FP2 A;  1EGD A;  3SCE A;  2E80 A;  3MXL A;  4F0X A;  1X8Z A;  2OJQ A;  2CJ6 A;  4E01 A;  2BTZ A;  2E81 A;  5EZ3 A;  1XFV A;  1K8T A;  1RX0 A;  1GU6 A;  5B5V A;  3D9E A;  3HWC A;  2YYJ A;  3X0X A;  4DOY A;  2CJ5 A;  1IVH A;  2OR0 A;  1GJV A;  2R05 A;  3SXQ A;  1U8V A;  2BU7 A;  3D1I A;  3D9D A;  5J6A A;  2C12 A;  3N0R A;  3MPJ A;  4L38 A;  4KTO A;  2JBS A;  3FCJ A;  2FP1 A;  3Q0A A;  5J71 A;  3BNJ A;  4N5F A;  2C0U A;  1UKW A;  4RM7 A;  1S26 A;  2BU6 A;  2Q8H A;  2R02 A;  1JQI A;  4G97 A;  1SC5 A;  4XVX A;  2OEV A;  2AO2 A;  3TZ5 A;  3CRK A;  3MKH A;  2UXW A;  3EON A;  1Y8P A;  3TZ2 A;  3BNF A;  4AKG A;  3MPI A;  4IRN A;  4QIC A;  4V26 A;  1XFZ A;  2VIG A;  2EBF X;  3D2R A;  4H81 A;  2RDZ A;  4Q5B A;  4LQS B;  1Y8N A;  4L3Z A;  2Z1Q A;  2DVL A;  3D6B A;  5BRM A;  4L1F A;  3MDE A;  2CJ7 A;  4J1V A;  3AFE A;  1EGC A;  2JIF A;  1UDY A;  4E00 A;  5M4P A;  1BUC A;  3LGQ A;  1RJ1 A;  2YYG A;  1R3B A;  4MP2 A;  4V25 A;  4KCF A;  4MPC A;  2Q8G A;  4E02 A;  2YYM A;  3BNH A;  1X90 A;  3R7K A;  1GKZ A;  3RKH A;  5GJW E;  2PO4 A;  2R0M A;  4IV6 A;  1T9G A;  3M9V A;  2YYL A;  4H7Q A;  3OIB A;  2BU8 A;  2VF1 A;  4FF3 A;  3U33 A;  2Q8F A;  5B5W A;  3TZ4 A;  4Q4U A;  1Y0V A;  3II9 A;  2CJ4 A;  1EGE A;  1SIR A;  1XFX A;  2BU2 A;  2JBR A;  4H85 A;  3GQT A;  3BNG A;  2R0N A;  3FO3 A;  5K3J A;  1W07 A;  1JM6 A;  2LFW A;  3DJL A;  2AZE A;  2XS1 A;  2GBB A;  3EOM A;  3VAD A;  1PK0 A;  2YYK A;  4X28 C;  1SK6 A;  3OWA A;  1K90 A;  5BRK A;  4NXL A;  1X91 A;  4DZY A;  4FF2 A;  4FF4 A;  1OAH A;  2PNR A;  3F29 A;  4OO2 A;  1R2J A;  2REH A;  2E0A A;  4MPE A;  2R03 A;  3PFD A;  3KML A;  3SWO A;  4HKS A;  2Q8I A;  2EBA A;  2CX9 A;  5K3I A;  4JIZ A;  4Q17 A;  4JEK A;  1XFU A;  4AI6 A;  2FON A;  2VR0 A;  2YGW A;  4P13 A;  2IX5 A;  3TTB A;  2ZDY A;  2XS8 A;  2RFQ A;  1RJ4 A;  2J7A A;  4U83 A;  2QR4 A;  2RF7 A;  2HJN A;  3LG1 A;  3OWM A;  3TZ0 A;  3L1T A;  4Q1O A;  5GJV E;  4HR3 A;  4FZ4 A;  1K93 A;  1XFW A;  2OEX A;  3Q24 A;  2D29 A;  3AFF A;  4MP7 A;  2ZDX A;  3C2P A;  4O5M A;  5M4K A;  4WJY A;  3D9F A;  3B96 A;  3GM6 A;  1QDB A;  1FS8 A;  4M9A A;  2EBH X;  1XG2 B;  2CJ8 A;  3UBR A;  2PG0 A;  3P4T A;  3D9G A;  5K3G A;  3VKH A;  1WS9 A;  1XFY A;  3SF6 A;  1GKX A;  2BU5 A;  4JIO A;  2OT4 A;  4HKR A;  3GNC A;  2ZKJ A;  3CRL A;  5M4M A;  1LVC A;  4FF1 A;  3CE2 A;  4X28 A;  4P79 A;  1IS2 A;  3MDD A;  3Q22 A;  3Q23 A;  2JBT A;  2DDH A;  4ZYJ A;  2YYI A;  3S7W A;  3C46 A;  4AKI A;  5B6B A;  2WBI A;  1FS7 A;  1RP3 A;  4Q0T A;  3C3L A;  1PI1 A;  3TOR A;  3VKG A;  2ZO5 A;  2IX6 A;  2EC5 A;  3UU9 A;  1FS9 A;  4MPN A;  4LQQ B;  3X29 A;  3NF4 A;  2F6L A;  4G5E A;  5M4N A;  4W9U A;  4AKH A;  4KSF A;  1SIQ A;  2A1T A;  5K3H A;  1Y8O A; 
#chains in the Genus database with same CATH homology
 4Q5C A;  3X0Y A;  4L3Y A;  4L3X A;  4ZXV A;  3MMO A;  2ZAF A;  1EGD A;  3SCE A;  2E80 A;  3MXL A;  2E81 A;  1RX0 A;  1GU6 A;  3D9E A;  3HWC A;  2YYJ A;  3X0X A;  4DOY A;  1IVH A;  2OR0 A;  3SXQ A;  1U8V A;  3D1I A;  3D9D A;  2C12 A;  3MPJ A;  4L38 A;  4KTO A;  2JBS A;  3FCJ A;  3BNJ A;  4N5F A;  2C0U A;  1UKW A;  4RM7 A;  1JQI A;  4XVX A;  3MKH A;  2UXW A;  3EON A;  3BNF A;  3MPI A;  4IRN A;  2VIG A;  2RDZ A;  4Q5B A;  4L3Z A;  2Z1Q A;  2DVL A;  3D6B A;  4L1F A;  3MDE A;  3AFE A;  1EGC A;  2JIF A;  1UDY A;  1BUC A;  3LGQ A;  2YYG A;  4KCF A;  2YYM A;  3BNH A;  3R7K A;  3RKH A;  2R0M A;  4IV6 A;  1T9G A;  3M9V A;  2YYL A;  3OIB A;  4Q4U A;  3II9 A;  1EGE A;  1SIR A;  2JBR A;  3GQT A;  3BNG A;  2R0N A;  3FO3 A;  5K3J A;  1W07 A;  3EOM A;  2YYK A;  4X28 C;  3OWA A;  4NXL A;  1OAH A;  4OO2 A;  3F29 A;  1R2J A;  2REH A;  3PFD A;  3SWO A;  2EBA A;  2CX9 A;  5K3I A;  4Q17 A;  4JEK A;  2FON A;  2VR0 A;  3TTB A;  4P13 A;  2IX5 A;  3LG1 A;  2RFQ A;  2J7A A;  2RF7 A;  4U83 A;  3OWM A;  3L1T A;  4Q1O A;  4HR3 A;  2D29 A;  3AFF A;  4O5M A;  4WJY A;  3D9F A;  3B96 A;  3GM6 A;  1QDB A;  1FS8 A;  4M9A A;  3UBR A;  2PG0 A;  3P4T A;  3D9G A;  5K3G A;  1WS9 A;  3SF6 A;  2OT4 A;  3GNC A;  4X28 A;  1IS2 A;  3MDD A;  2JBT A;  2DDH A;  4ZYJ A;  2YYI A;  3S7W A;  2WBI A;  1FS7 A;  4Q0T A;  3TOR A;  2ZO5 A;  2IX6 A;  3UU9 A;  1FS9 A;  3NF4 A;  4G5E A;  4W9U A;  1SIQ A;  2A1T A;  5K3H A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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