2F6LA

X-ray structure of chorismate mutase from mycobacterium tuberculosis
Total Genus 70
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
70
sequence length
166
structure length
166
Chain Sequence
DGTSQLAELVDAAAERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYVTRVFDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNRMLSQIWSHWSLLSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALPPA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Isomerase
molecule keywords Chorismate mutase
publication title Biochemical and structural characterization of the secreted chorismate mutase (Rv1885c) from Mycobacterium tuberculosis H37Rv: an *AroQ enzyme not regulated by the aromatic amino acids.
pubmed doi rcsb
source organism Mycobacterium tuberculosis
total genus 70
structure length 166
sequence length 166
chains with identical sequence B
ec nomenclature ec 5.4.99.5: Chorismate mutase.
pdb deposition date 2005-11-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01817 CM_2 Chorismate mutase type II
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.140.170 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A; domain 3 2f6lA00
2FP1A 2FP2A 2F6LA 2GBBA 2AO2A
chains in the Genus database with same CATH superfamily
1RJ4A 2LFWA 3MMOA 3TZ5A 3MDDA 2CX9A 3SWOA 4JIZA 4NXLA 1PI1A 2JBTA 3D9GA 3MKHA 5K3IA 3D9EA 1LVCA 2Q8FA 2PNRA 4H81A 4Q5BA 2CJ6A 4G97A 2VR0A 3AFEA 2C12A 4H85A 1FS9A 4J1VA 4JIOA 2RDZA 1R3BA 4MP7A 4V26A 1U8VA 2IX5A 3AFFA 2DDHA 2EC5A 2BU7A 1UDYA 3LGQA 3Q22A 4HKRA 4Q17A 1OAHA 1SIQA 2EBAA 2JIFA 3BNFA 1K93A 2PO4A 2YYGA 3D9FA 3M9VA 3VKHA 3MPIA 4AKGA 4H7QA 2VIGA 5J6AA 4LQQB 2R0MA 3KMLA 2EBHX 4O5MA 1RP3A 2C0UA 2YYLA 4WJYA 3OWMA 2YYMA 4AKHA 4KSFA 5BRMA 1WS9A 4MP2A 4DZYA 4U83A 3Q23A 2OJQA 2Z1QA 2A1TA 2J7AA 4AI6A 4IRNA 5K3HA 3BNGA 2XS8A 4ZXVA 1T9GA 2CJ4A 4HR3A 2BU2A 2OEXA 3CRLA 4QICA 3FCJA 2OR0A 1XFVA 5B5VA 4E02A 4JEKA 1X91A 3TORA 4N5FA 1Y8NA 1SC5A 2OT4A 4IV6A 1GJVA 1GU6A 1Y8OA 3FO3A 1XFUA 2YYIA 5M4KA 3HWCA 5B6BA 3S7WA 1RJ1A 2E81A 2FP2A 3X29A 3EONA 1FS8A 2Q8HA 5M4MA 4LQSB 4KS9A 2ZDYA 3TTBA 4KCFA 3TZ4A 1R2JA 2VF1A 3EOMA 2CJ8A 3MPJA 5GJVE 3SXQA 4E01A 4Q5CA 1GKZA 2R03A 1QDBA 4E00A 3UBRA 4XVXA 4RM7A 2R02A 1PK0A 2R0NA 1Y0VA 3SCEA 1XFYA 3BNJA 4L38A 3TZ2A 3II9A 2FP1A 3TZ0A 2ZDXA 2DVLA 2BTZA 1XFZA 2F6LA 3Q0AA 3NF4A 3C46A 1RX0A 2XQRB 4X28C 2WBIA 2YYJA 2JBSA 4V25A 4FF2A 4Q4UA 4X28A 2RFQA 3X0XA 3MXLA 3VKGA 3SF6A 3L1TA 4DOYA 2XS1A 3UU9A 5B5WA 4Q1OA 1K8TA 3CRKA 3R7KA 1BUCA 4L3YA 1IS2A 1IVHA 1S26A 2EBFX 2ZO5A 3PFDA 3BNHA 3LG1A 4L3XA 4MPEA 4P79A 3RKHA 2D29A 1W07A 2PG0A 3P4TA 1GKXA 1Y8PA 4ZYJA 5M4PA 2E80A 1UKWA 2R05A 2GBBA 2YGWA 3D6BA 2OEVA 2RF7A 3MDEA 4L1FA 3CE2A 3D2RA 4OO2A 3VADA 2Q8GA 5M4NA 4KTOA 2BU8A 3N0RA 2UXWA 5K3JA 4F0XA 3OWAA 3GNCA 1XG2B 5J71A 1X90A 2ZAFA 1EGDA 3C3LA 2BU5A 4FF1A 4FF3A 4FF4A 2IX6A 2HJNA 2AO2A 4L3ZA 1FS7A 3X0YA 4AKIA 3D1IA 4MPCA 1XFWA 1XFXA 1EGEA 1EGCA 5K3GA 1JQIA 3OIBA 2CJ5A 2QR4A 3B96A 3F29A 3GQTA 4M9AA 4Q0TA 2FONA 1SK6A 1K90A 2BU6A 4HKSA 4P13A 1X8ZA 4KSAA 2ZKJA 5GJWE 3GM6A 2REHA 3Q24A 2AZEA 4W9UA 3C2PA 1JM6A 5BRKA 2JBRA 4MPNA 4FZ4A 3D9DA 4G5EA 2YYKA 2E0AA 2CJ7A 1SIRA 2Q8IA
chains in the Genus database with same CATH topology
2LFWA 4AKHA 2YGWA 4KSFA 2GBBA 3CE2A 1PK0A 1Y0VA 3N0RA 1XFYA 1LVCA 4AI6A 3Q0AA 2FP1A 4F0XA 3C46A 1XFZA 2F6LA 4FF1A 4FF3A 3C3LA 4FF4A 4QICA 4G97A 1XFVA 2AO2A 4AKIA 5GJVE 2EC5A 1XFWA 1XFXA 4FF2A 1SC5A 3Q22A 4HKRA 2QR4A 1XFUA 3VKGA 1SK6A 1K90A 1K93A 2PO4A 4HKSA 4KSAA 5GJWE 3Q24A 3C2PA 1K8TA 3X29A 2AZEA 2FP2A 4AKGA 3VKHA 1S26A 2EBFX 4KS9A 4P79A 4FZ4A 3KMLA 2EBHX 2VF1A 1RP3A 3Q23A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2FP1 A;  2FP2 A;  2F6L A;  2GBB A;  2AO2 A; 
#chains in the Genus database with same CATH topology
 1RJ4 A;  2LFW A;  3MMO A;  3TZ5 A;  3MDD A;  2CX9 A;  3SWO A;  4JIZ A;  4NXL A;  1PI1 A;  2JBT A;  3D9G A;  3MKH A;  5K3I A;  3D9E A;  1LVC A;  2Q8F A;  2PNR A;  4H81 A;  4Q5B A;  2CJ6 A;  4G97 A;  2VR0 A;  3AFE A;  2C12 A;  4H85 A;  1FS9 A;  4J1V A;  4JIO A;  2RDZ A;  1R3B A;  4MP7 A;  4V26 A;  1U8V A;  2IX5 A;  3AFF A;  2DDH A;  2EC5 A;  2BU7 A;  1UDY A;  3LGQ A;  3Q22 A;  4HKR A;  4Q17 A;  1OAH A;  1SIQ A;  2EBA A;  2JIF A;  3BNF A;  1K93 A;  2PO4 A;  2YYG A;  3D9F A;  3M9V A;  3VKH A;  3MPI A;  4AKG A;  4H7Q A;  2VIG A;  5J6A A;  4LQQ B;  2R0M A;  3KML A;  2EBH X;  4O5M A;  1RP3 A;  2C0U A;  2YYL A;  4WJY A;  3OWM A;  2YYM A;  4AKH A;  4KSF A;  5BRM A;  1WS9 A;  4MP2 A;  4DZY A;  4U83 A;  3Q23 A;  2OJQ A;  2Z1Q A;  2A1T A;  2J7A A;  4AI6 A;  4IRN A;  5K3H A;  3BNG A;  2XS8 A;  4ZXV A;  1T9G A;  2CJ4 A;  4HR3 A;  2BU2 A;  2OEX A;  3CRL A;  4QIC A;  3FCJ A;  2OR0 A;  1XFV A;  5B5V A;  4E02 A;  4JEK A;  1X91 A;  3TOR A;  4N5F A;  1Y8N A;  1SC5 A;  2OT4 A;  4IV6 A;  1GJV A;  1GU6 A;  1Y8O A;  3FO3 A;  1XFU A;  2YYI A;  5M4K A;  3HWC A;  5B6B A;  3S7W A;  1RJ1 A;  2E81 A;  2FP2 A;  3X29 A;  3EON A;  1FS8 A;  2Q8H A;  5M4M A;  4LQS B;  4KS9 A;  2ZDY A;  3TTB A;  4KCF A;  3TZ4 A;  1R2J A;  2VF1 A;  3EOM A;  2CJ8 A;  3MPJ A;  5GJV E;  3SXQ A;  4E01 A;  4Q5C A;  1GKZ A;  2R03 A;  1QDB A;  4E00 A;  3UBR A;  4XVX A;  4RM7 A;  2R02 A;  1PK0 A;  2R0N A;  1Y0V A;  3SCE A;  1XFY A;  3BNJ A;  4L38 A;  3TZ2 A;  3II9 A;  2FP1 A;  3TZ0 A;  2ZDX A;  2DVL A;  2BTZ A;  1XFZ A;  2F6L A;  3Q0A A;  3NF4 A;  3C46 A;  1RX0 A;  2XQR B;  4X28 C;  2WBI A;  2YYJ A;  2JBS A;  4V25 A;  4FF2 A;  4Q4U A;  4X28 A;  2RFQ A;  3X0X A;  3MXL A;  3VKG A;  3SF6 A;  3L1T A;  4DOY A;  2XS1 A;  3UU9 A;  5B5W A;  4Q1O A;  1K8T A;  3CRK A;  3R7K A;  1BUC A;  4L3Y A;  1IS2 A;  1IVH A;  1S26 A;  2EBF X;  2ZO5 A;  3PFD A;  3BNH A;  3LG1 A;  4L3X A;  4MPE A;  4P79 A;  3RKH A;  2D29 A;  1W07 A;  2PG0 A;  3P4T A;  1GKX A;  1Y8P A;  4ZYJ A;  5M4P A;  2E80 A;  1UKW A;  2R05 A;  2GBB A;  2YGW A;  3D6B A;  2OEV A;  2RF7 A;  3MDE A;  4L1F A;  3CE2 A;  3D2R A;  4OO2 A;  3VAD A;  2Q8G A;  5M4N A;  4KTO A;  2BU8 A;  3N0R A;  2UXW A;  5K3J A;  4F0X A;  3OWA A;  3GNC A;  1XG2 B;  5J71 A;  1X90 A;  2ZAF A;  1EGD A;  3C3L A;  2BU5 A;  4FF1 A;  4FF3 A;  4FF4 A;  2IX6 A;  2HJN A;  2AO2 A;  4L3Z A;  1FS7 A;  3X0Y A;  4AKI A;  3D1I A;  4MPC A;  1XFW A;  1XFX A;  1EGE A;  1EGC A;  5K3G A;  1JQI A;  3OIB A;  2CJ5 A;  2QR4 A;  3B96 A;  3F29 A;  3GQT A;  4M9A A;  4Q0T A;  2FON A;  1SK6 A;  1K90 A;  2BU6 A;  4HKS A;  4P13 A;  1X8Z A;  4KSA A;  2ZKJ A;  5GJW E;  3GM6 A;  2REH A;  3Q24 A;  2AZE A;  4W9U A;  3C2P A;  1JM6 A;  5BRK A;  2JBR A;  4MPN A;  4FZ4 A;  3D9D A;  4G5E A;  2YYK A;  2E0A A;  2CJ7 A;  1SIR A;  2Q8I A; 
#chains in the Genus database with same CATH homology
 2LFW A;  4AKH A;  2YGW A;  4KSF A;  2GBB A;  3CE2 A;  1PK0 A;  1Y0V A;  3N0R A;  1XFY A;  1LVC A;  4AI6 A;  3Q0A A;  2FP1 A;  4F0X A;  3C46 A;  1XFZ A;  2F6L A;  4FF1 A;  4FF3 A;  3C3L A;  4FF4 A;  4QIC A;  4G97 A;  1XFV A;  2AO2 A;  4AKI A;  5GJV E;  2EC5 A;  1XFW A;  1XFX A;  4FF2 A;  1SC5 A;  3Q22 A;  4HKR A;  2QR4 A;  1XFU A;  3VKG A;  1SK6 A;  1K90 A;  1K93 A;  2PO4 A;  4HKS A;  4KSA A;  5GJW E;  3Q24 A;  3C2P A;  1K8T A;  3X29 A;  2AZE A;  2FP2 A;  4AKG A;  3VKH A;  1S26 A;  2EBF X;  4KS9 A;  4P79 A;  4FZ4 A;  3KML A;  2EBH X;  2VF1 A;  1RP3 A;  3Q23 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...