The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
124
|
sequence length |
507
|
structure length |
481
|
Chain Sequence |
RIDVLKGEKALKASGLVPEHADAFKKIARELNTYILFRPVNKLATNLIKSGVATKGLNVHGKSSDWGPVAGYIPFDQDLSKKHGQQLAVEKGNLENKKSITEHEGEIGKIPLKLDHLRIEELKENGIILKGKKEIDNGKKYYLLESNNQVYEFRISDENNEVQYKTKEGKITVLGEKFNWRNIEVMAKNVEGVLKPLTADYDLFALAPSLTEIKKQIPQKEWDKVVNTPNSLEKQKGVTNLLIKYGIERKPDSTKGTLSNWQKQMLDRLNEAVKYTGYTGGDVVNHGTEQDNEEFPEKDNEIFIINPEGEFILTKNWEMTGRFIEKNITGKDYLYYFNRSYNKIAPGNKAYIEWTDPITKAKINTIPTSAEFIKNLSSIRRSKKIAGYLSDYYNSANHIFSQEKKRKISIFRGIQAYNEIENVLKSKQIAPEYKNYFQYLKERITNQVQLLLTHQFKLLYKQLNFTENETDNFEVFQKIID
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| molecule tags |
Toxin, lyase/metal binding protein
|
| molecule keywords |
Calmodulin-sensitive adenylate cyclase
|
| publication title |
Structural and kinetic analyses of the interaction of anthrax adenylyl cyclase toxin with reaction products cAMP and pyrophosphate.
pubmed doi rcsb |
| source organism |
Bacillus anthracis
|
| total genus |
124
|
| structure length |
481
|
| sequence length |
507
|
| chains with identical sequence |
B, C
|
| ec nomenclature |
ec
4.6.1.1: Adenylate cyclase. |
| pdb deposition date | 2004-03-04 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF03497 | Anthrax_toxA | Anthrax toxin LF subunit |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Alpha | Up-down Bundle | Butyryl-CoA Dehydrogenase, subunit A; domain 3 | Butyryl-CoA Dehydrogenase, subunit A; domain 3 | ||
| Alpha Beta | Alpha-Beta Complex | Adenylylcyclase toxin fold | Anthrax toxin, edema factor, central domain |
#chains in the Genus database with same CATH superfamily 2COL A; 1XFZ A; 1PK0 A; 1S26 A; 1SK6 A; 1XFY A; 1K93 A; 1XFU A; 1K90 A; 1Y0V A; 1XFV A; 1YRU A; 1YRT A; 1XFX A; 1XFW A; 1K8T A; 1LVC A; 1ZOT A; #chains in the Genus database with same CATH topology 4N5F A; 4FZ4 A; 1S26 A; 2JBR A; 4JEK A; 1UKW A; 5M4K A; 2YYG A; 3RKH A; 2R02 A; 4L3X A; 2RDZ A; 2DVL A; 3VKH A; 2YYJ A; 4LQS B; 4P79 A; 3SXQ A; 3Q24 A; 1W07 A; 4RM7 A; 1YRU A; 4MP7 A; 2BU5 A; 3MPJ A; 2AZE A; 2A1T A; 2CJ8 A; 1T9G A; 2RF7 A; 4KCF A; 4X28 C; 4Q5C A; 4F0X A; 3EOM A; 3R7K A; 4MPC A; 1XFV A; 3B96 A; 3MXL A; 4KSF A; 3Q22 A; 4FF1 A; 4XVX A; 5B5V A; 5BRM A; 3SWO A; 2R0N A; 4OO2 A; 4E01 A; 3MKH A; 2WBI A; 1RP3 A; 2EC5 A; 2PNR A; 5K3H A; 1K90 A; 3GQT A; 3OIB A; 2ZDX A; 3MPI A; 2XQR B; 2ZKJ A; 4E00 A; 2CJ5 A; 1BUC A; 2YYL A; 4DOY A; 4H81 A; 1ZOT A; 1JQI A; 2ZAF A; 3VAD A; 2C12 A; 2Q8F A; 3CE2 A; 1X90 A; 4L3Z A; 2OT4 A; 3S7W A; 2R05 A; 3SCE A; 1Y0V A; 5M4N A; 3GM6 A; 3HWC A; 5J6A A; 3TOR A; 4AKH A; 1GJV A; 5GJV E; 2E80 A; 4JIO A; 1UDY A; 2BTZ A; 2UXW A; 3X29 A; 3X0Y A; 2VIG A; 2XS8 A; 1GKX A; 5BRK A; 3AFF A; 1XFX A; 3TZ0 A; 3VKG A; 1EGD A; 1JM6 A; 2R0M A; 3FO3 A; 3L1T A; 2QR4 A; 3UU9 A; 3P4T A; 3D9E A; 5M4M A; 4HR3 A; 3D1I A; 1EGC A; 4IV6 A; 4J1V A; 1WS9 A; 3Q0A A; 3MMO A; 4Q1O A; 4W9U A; 2AO2 A; 1XFZ A; 1U8V A; 5B5W A; 5K3I A; 1SC5 A; 4FF4 A; 2FP1 A; 4HKS A; 4KS9 A; 5M4P A; 2C0U A; 3LGQ A; 3TZ4 A; 1IVH A; 2RFQ A; 2FON A; 4V25 A; 2HJN A; 3UBR A; 1Y8O A; 1R2J A; 1Y8P A; 2BU6 A; 2JBT A; 2OEX A; 2Q8H A; 3NF4 A; 2D29 A; 4M9A A; 3BNJ A; 4O5M A; 3SF6 A; 3C3L A; 2E0A A; 3LG1 A; 1IS2 A; 2COL A; 4L1F A; 1R3B A; 1EGE A; 2Z1Q A; 3BNF A; 4AI6 A; 5J71 A; 4X28 A; 1X8Z A; 3TZ5 A; 1K8T A; 2PO4 A; 4Q0T A; 4ZYJ A; 3D9F A; 3FCJ A; 1FS9 A; 3F29 A; 4L3Y A; 2VR0 A; 2Q8I A; 2YGW A; 2BU7 A; 1YRT A; 1FS7 A; 1FS8 A; 2BU8 A; 3EON A; 1RJ4 A; 4KSA A; 3X0X A; 4E02 A; 3TZ2 A; 4DZY A; 1QDB A; 3CRK A; 1OAH A; 1PK0 A; 2JBS A; 1XFY A; 2BU2 A; 4FF3 A; 3GNC A; 4G97 A; 4KTO A; 1PI1 A; 2VF1 A; 4MPE A; 3D2R A; 4P13 A; 3C46 A; 3MDE A; 2EBA A; 3OWA A; 3D6B A; 4Q17 A; 2ZDY A; 5K3J A; 4MPN A; 1K93 A; 2REH A; 4LQQ B; 1SIQ A; 4V26 A; 2EBH X; 2IX5 A; 2OJQ A; 2YYI A; 3AFE A; 4AKI A; 1RX0 A; 2CJ4 A; 4HKR A; 3Q23 A; 2LFW A; 1SIR A; 4H85 A; 5B6B A; 2CJ6 A; 2R03 A; 3M9V A; 3II9 A; 1RJ1 A; 1SK6 A; 3D9G A; 3PFD A; 2JIF A; 3D9D A; 4AKG A; 3N0R A; 2XS1 A; 4L38 A; 2DDH A; 2YYM A; 4MP2 A; 2OR0 A; 2E81 A; 3KML A; 4NXL A; 4QIC A; 3C2P A; 1Y8N A; 1X91 A; 4U83 A; 3TTB A; 2GBB A; 3OWM A; 2ZO5 A; 4G5E A; 5GJW E; 2CJ7 A; 2EBF X; 2F6L A; 1LVC A; 1XG2 B; 2YYK A; 4IRN A; 2CX9 A; 4Q5B A; 3BNH A; 2IX6 A; 3MDD A; 2FP2 A; 2PG0 A; 4ZXV A; 4Q4U A; 2OEV A; 1XFU A; 3CRL A; 4H7Q A; 4JIZ A; 2Q8G A; 4FF2 A; 1GKZ A; 1XFW A; 5K3G A; 4WJY A; 1GU6 A; 2J7A A; 3BNG A; #chains in the Genus database with same CATH homology 4FZ4 A; 1S26 A; 3CE2 A; 1K93 A; 1Y0V A; 4AKH A; 2EBH X; 4AKI A; 4HKR A; 3Q23 A; 2LFW A; 5GJV E; 3C3L A; 3VKH A; 2COL A; 4P79 A; 1SK6 A; 3X29 A; 3Q24 A; 4AI6 A; 4AKG A; 3N0R A; 1YRU A; 3VKG A; 1XFX A; 4QIC A; 1K8T A; 3KML A; 3C2P A; 2PO4 A; 2QR4 A; 2AZE A; 4F0X A; 2YGW A; 2GBB A; 1XFV A; 5GJW E; 3Q0A A; 4KSF A; 4KSA A; 2EBF X; 1YRT A; 2F6L A; 4FF1 A; 1LVC A; 2AO2 A; 1XFZ A; 1PK0 A; 2FP2 A; 4FF3 A; 1RP3 A; 1XFY A; 1SC5 A; 2EC5 A; 1XFU A; 4FF4 A; 2FP1 A; 1K90 A; 2VF1 A; 4G97 A; 4HKS A; 4KS9 A; 4FF2 A; 1XFW A; 3Q22 A; 3C46 A; 1ZOT A;
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
