2CJ5A

Crystal structure of a cell wall invertase inhibitor from tobacco (ph 5.0)
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
147
structure length
147
Chain Sequence
NNLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Inhibitor
source organism Nicotiana tabacum
publication title Multiple Crystal Forms of the Cell-Wall Invertase Inhibitor from Tobacco Support High Conformational Rigidity Over a Broad Ph-Range
pubmed doi rcsb
molecule keywords INVERTASE INHIBITOR
total genus 60
structure length 147
sequence length 147
ec nomenclature
pdb deposition date 2006-03-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04043 PMEI Plant invertase/pectin methylesterase inhibitor
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.140.40 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Invertase/pectin methylesterase inhibitor family protein 2cj5A00
2CJ4A 2CJ6A 2XQRB 1X91A 1RJ1A 1X8ZA 1XG2B 2CJ8A 1X90A 2CJ5A 1RJ4A 2CJ7A
chains in the Genus database with same CATH superfamily
1JM6A 3CRLA 4Q17A 4F0XA 4Q4UA 2XS8A 2LFWA 3D9FA 3MPJA 3SWOA 3LG1A 3D9GA 1LVCA 3TZ0A 5J71A 3X0XA 2FP1A 2CX9A 4DZYA 3TZ4A 4JEKA 1K90A 3C3LA 3KMLA 3TZ2A 2WBIA 1GKZA 3N0RA 1UDYA 1PI1A 3D2RA 4RM7A 4E01A 1QDBA 1SIQA 4MPCA 3VADA 2E80A 1XFYA 2EC5A 1IVHA 2J7AA 2YYIA 4W9UA 2OEXA 4QICA 3VKGA 1EGDA 1SC5A 2C12A 2Q8IA 3P4TA 1XFWA 5B5VA 4NXLA 4Q5BA 2YYLA 3EONA 4L38A 3BNGA 1GKXA 3OIBA 2YYKA 4KCFA 1K8TA 5GJVE 2E0AA 2OR0A 4HR3A 1RP3A 3BNJA 4X28C 4AKIA 2R03A 1R2JA 4O5MA 4P13A 3RKHA 4AKGA 2CJ8A 4U83A 5M4NA 3X0YA 2CJ4A 3FO3A 3C46A 1FS8A 1R3BA 3UBRA 2OJQA 4ZYJA 2JIFA 2VF1A 4LQQB 2DDHA 2IX6A 4HKSA 2RDZA 2PNRA 3TZ5A 3GM6A 2R0MA 3D9DA 2AZEA 3X29A 2PG0A 2HJNA 5J6AA 1Y0VA 5K3HA 2ZO5A 4Q0TA 3BNFA 5BRKA 4P79A 3VKHA 5BRMA 2REHA 2UXWA 4AKHA 4OO2A 4KSFA 3MMOA 4KSAA 1IS2A 1W07A 1SIRA 2JBRA 1S26A 1EGEA 2VIGA 3BNHA 5M4MA 2AO2A 2BTZA 1PK0A 4XVXA 3R7KA 4E02A 3UU9A 4H7QA 2RFQA 4KTOA 1UKWA 2OT4A 3Q0AA 1RX0A 2JBSA 3D6BA 4WJYA 3Q22A 3Q24A 2IX5A 4MPEA 2Q8GA 5M4PA 1OAHA 4JIOA 2OEVA 1XG2B 1X90A 5K3JA 1SK6A 2EBHX 2CJ7A 2EBFX 2VR0A 3MXLA 4J1VA 2Q8FA 5M4KA 3C2PA 3SF6A 1U8VA 3OWMA 2Q8HA 2YYJA 3PFDA 3TTBA 1WS9A 4MP7A 2CJ5A 1RJ4A 4L3XA 2ZKJA 3S7WA 2XQRB 3L1TA 2R02A 3EOMA 3SCEA 3D9EA 3GQTA 2D29A 2ZDXA 4FF4A 4AI6A 3F29A 3SXQA 3CRKA 2PO4A 4FZ4A 2BU5A 2XS1A 1GJVA 1XFVA 1RJ1A 4L1FA 1Y8NA 3D1IA 1GU6A 2FP2A 4FF1A 3AFFA 1Y8PA 4N5FA 4V25A 1K93A 3MKHA 2JBTA 2E81A 2CJ6A 2ZAFA 4MPNA 2YYGA 3NF4A 4L3YA 1Y8OA 3CE2A 4HKRA 5K3IA 2GBBA 1XFUA 4H85A 4KS9A 4E00A 3AFEA 2BU7A 2RF7A 3MPIA 4Q1OA 4X28A 2C0UA 2BU8A 3M9VA 3MDEA 1FS7A 4M9AA 5GJWE 4FF3A 4IRNA 4DOYA 3OWAA 4MP2A 3Q23A 2FONA 1T9GA 5B5WA 2A1TA 4ZXVA 2QR4A 3MDDA 4G5EA 1BUCA 4LQSB 1EGCA 2R05A 3HWCA 2ZDYA 3B96A 5K3GA 4IV6A 4H81A 3FCJA 2DVLA 2BU2A 4V26A 5B6BA 4G97A 1XFZA 3GNCA 1JQIA 2Z1QA 2R0NA 2YYMA 1X91A 3II9A 1XFXA 3LGQA 4JIZA 1X8ZA 4FF2A 2F6LA 2EBAA 3TORA 2BU6A 4L3ZA 1FS9A 2YGWA 4Q5CA
chains in the Genus database with same CATH topology
2CJ4A 2CJ6A 2XQRB 1X91A 1RJ1A 1X8ZA 1XG2B 2CJ8A 1X90A 2CJ5A 1RJ4A 2CJ7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2CJ4 A;  2CJ6 A;  2XQR B;  1X91 A;  1RJ1 A;  1X8Z A;  1XG2 B;  2CJ8 A;  1X90 A;  2CJ5 A;  1RJ4 A;  2CJ7 A; 
#chains in the Genus database with same CATH topology
 1JM6 A;  3CRL A;  4Q17 A;  4F0X A;  4Q4U A;  2XS8 A;  2LFW A;  3D9F A;  3MPJ A;  3SWO A;  3LG1 A;  3D9G A;  1LVC A;  3TZ0 A;  5J71 A;  3X0X A;  2FP1 A;  2CX9 A;  4DZY A;  3TZ4 A;  4JEK A;  1K90 A;  3C3L A;  3KML A;  3TZ2 A;  2WBI A;  1GKZ A;  3N0R A;  1UDY A;  1PI1 A;  3D2R A;  4RM7 A;  4E01 A;  1QDB A;  1SIQ A;  4MPC A;  3VAD A;  2E80 A;  1XFY A;  2EC5 A;  1IVH A;  2J7A A;  2YYI A;  4W9U A;  2OEX A;  4QIC A;  3VKG A;  1EGD A;  1SC5 A;  2C12 A;  2Q8I A;  3P4T A;  1XFW A;  5B5V A;  4NXL A;  4Q5B A;  2YYL A;  3EON A;  4L38 A;  3BNG A;  1GKX A;  3OIB A;  2YYK A;  4KCF A;  1K8T A;  5GJV E;  2E0A A;  2OR0 A;  4HR3 A;  1RP3 A;  3BNJ A;  4X28 C;  4AKI A;  2R03 A;  1R2J A;  4O5M A;  4P13 A;  3RKH A;  4AKG A;  2CJ8 A;  4U83 A;  5M4N A;  3X0Y A;  2CJ4 A;  3FO3 A;  3C46 A;  1FS8 A;  1R3B A;  3UBR A;  2OJQ A;  4ZYJ A;  2JIF A;  2VF1 A;  4LQQ B;  2DDH A;  2IX6 A;  4HKS A;  2RDZ A;  2PNR A;  3TZ5 A;  3GM6 A;  2R0M A;  3D9D A;  2AZE A;  3X29 A;  2PG0 A;  2HJN A;  5J6A A;  1Y0V A;  5K3H A;  2ZO5 A;  4Q0T A;  3BNF A;  5BRK A;  4P79 A;  3VKH A;  5BRM A;  2REH A;  2UXW A;  4AKH A;  4OO2 A;  4KSF A;  3MMO A;  4KSA A;  1IS2 A;  1W07 A;  1SIR A;  2JBR A;  1S26 A;  1EGE A;  2VIG A;  3BNH A;  5M4M A;  2AO2 A;  2BTZ A;  1PK0 A;  4XVX A;  3R7K A;  4E02 A;  3UU9 A;  4H7Q A;  2RFQ A;  4KTO A;  1UKW A;  2OT4 A;  3Q0A A;  1RX0 A;  2JBS A;  3D6B A;  4WJY A;  3Q22 A;  3Q24 A;  2IX5 A;  4MPE A;  2Q8G A;  5M4P A;  1OAH A;  4JIO A;  2OEV A;  1XG2 B;  1X90 A;  5K3J A;  1SK6 A;  2EBH X;  2CJ7 A;  2EBF X;  2VR0 A;  3MXL A;  4J1V A;  2Q8F A;  5M4K A;  3C2P A;  3SF6 A;  1U8V A;  3OWM A;  2Q8H A;  2YYJ A;  3PFD A;  3TTB A;  1WS9 A;  4MP7 A;  2CJ5 A;  1RJ4 A;  4L3X A;  2ZKJ A;  3S7W A;  2XQR B;  3L1T A;  2R02 A;  3EOM A;  3SCE A;  3D9E A;  3GQT A;  2D29 A;  2ZDX A;  4FF4 A;  4AI6 A;  3F29 A;  3SXQ A;  3CRK A;  2PO4 A;  4FZ4 A;  2BU5 A;  2XS1 A;  1GJV A;  1XFV A;  1RJ1 A;  4L1F A;  1Y8N A;  3D1I A;  1GU6 A;  2FP2 A;  4FF1 A;  3AFF A;  1Y8P A;  4N5F A;  4V25 A;  1K93 A;  3MKH A;  2JBT A;  2E81 A;  2CJ6 A;  2ZAF A;  4MPN A;  2YYG A;  3NF4 A;  4L3Y A;  1Y8O A;  3CE2 A;  4HKR A;  5K3I A;  2GBB A;  1XFU A;  4H85 A;  4KS9 A;  4E00 A;  3AFE A;  2BU7 A;  2RF7 A;  3MPI A;  4Q1O A;  4X28 A;  2C0U A;  2BU8 A;  3M9V A;  3MDE A;  1FS7 A;  4M9A A;  5GJW E;  4FF3 A;  4IRN A;  4DOY A;  3OWA A;  4MP2 A;  3Q23 A;  2FON A;  1T9G A;  5B5W A;  2A1T A;  4ZXV A;  2QR4 A;  3MDD A;  4G5E A;  1BUC A;  4LQS B;  1EGC A;  2R05 A;  3HWC A;  2ZDY A;  3B96 A;  5K3G A;  4IV6 A;  4H81 A;  3FCJ A;  2DVL A;  2BU2 A;  4V26 A;  5B6B A;  4G97 A;  1XFZ A;  3GNC A;  1JQI A;  2Z1Q A;  2R0N A;  2YYM A;  1X91 A;  3II9 A;  1XFX A;  3LGQ A;  4JIZ A;  1X8Z A;  4FF2 A;  2F6L A;  2EBA A;  3TOR A;  2BU6 A;  4L3Z A;  1FS9 A;  2YGW A;  4Q5C A; 
#chains in the Genus database with same CATH homology
 2CJ4 A;  2CJ6 A;  2XQR B;  1X91 A;  1RJ1 A;  1X8Z A;  1XG2 B;  2CJ8 A;  1X90 A;  2CJ5 A;  1RJ4 A;  2CJ7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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