3AFFA

Crystal structure of the hsaa monooxygenase from m. tuberculosis
Total Genus 144
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
144
sequence length
388
structure length
366
Chain Sequence
RDAQSVLAAIDNLLPEIRDRAQATEDLRRLPDETVKALDDVGFFTLLQPQQWGGLQCDPALFFEATRRLASVCGSTGWVSSIVGVHNWHLALFDQRAQEEVWGEDPSTRISSSYAPMGAGVVVDGGYLVNGSWNWSSGCDHASWTFVGGPVIKDGRPVDFGSFLIPRSEYEIKDVWYVVGLRGTGSNTLVVKDVFVPRHRFLSYKAMNDHTAGGLATNSAPVYKMPWGTMHPTTISAPIVGMAYGAYAAHVEHQIAEAASDIDAAWRQLIGNVSDEYALLAAGKEIPFELRARARRDQVRATGRSIASIDRLFEASGATALSNEAPIQRFWRDAHAGRVHAANDPERAYVIFGNHEFGLPPGDTMV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
source organism Mycobacterium tuberculosis
publication title A flavin-dependent monooxygenase from Mycobacterium tuberculosis involved in cholesterol catabolism
pubmed doi rcsb
molecule keywords Hydroxylase, putative
total genus 144
structure length 366
sequence length 388
chains with identical sequence B
ec nomenclature ec 1.14.14.12: 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase.
pdb deposition date 2010-02-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF08028 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 3affA01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 3affA03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 3affA02
4IV6A 4XVXA 2YYJA 1SIQA 2YYMA 2D29A 3D9FA 3FCJA 1UKWA 5K3HA 2VIGA 3GQTA 3HWCA 4L3ZA 3UBRA 3II9A 2CX9A 1BUCA 2RFQA 2DDHA 3LGQA 3NF4A 4DOYA 2IX5A 1FS9A 3RKHA 2YYGA 3BNGA 4KTOA 5K3JA 4Q0TA 3B96A 1RX0A 4P13A 4X28A 1T9GA 3AFFA 1QDBA 1FS8A 4Q1OA 3TTBA 3D9DA 1EGEA 3MPJA 3X0YA 3L1TA 4X28C 2R0MA 3BNFA 3MPIA 2JBSA 4Q4UA 3SXQA 2RDZA 3D9GA 3S7WA 1W07A 2FONA 4IRNA 1FS7A 2E81A 4Q5CA 3OWMA 4WJYA 3MKHA 1GU6A 4G5EA 3MDEA 2ZAFA 2YYKA 3LG1A 1IVHA 2J7AA 2OR0A 2YYIA 3SF6A 3GNCA 3GM6A 2DVLA 2EBAA 1EGDA 2RF7A 4NXLA 5K3GA 4L38A 1JQIA 3D6BA 2YYLA 3F29A 3SWOA 4RM7A 2JIFA 2JBRA 3BNJA 3UU9A 4JEKA 1OAHA 4L1FA 3R7KA 2ZO5A 4U83A 1WS9A 3MMOA 4Q17A 3OWAA 3D1IA 2Z1QA 4M9AA 4N5FA 4ZXVA 4L3XA 3OIBA 2A1TA 2VR0A 3X0XA 2E80A 4L3YA 3EONA 2JBTA 4KCFA 3MDDA 3EOMA 2C12A 3SCEA 3PFDA 1EGCA 2OT4A 3AFEA 1U8VA 3M9VA 3MXLA 1SIRA 4ZYJA 2R0NA 2REHA 2UXWA 4OO2A 2PG0A 2C0UA 3D9EA 3BNHA 1UDYA 2WBIA 3P4TA 1IS2A 2IX6A 4Q5BA 1R2JA 5K3IA 3TORA 4O5MA 3FO3A 4W9UA 4HR3A
chains in the Genus database with same CATH superfamily
3CRKA 4IV6A 4XVXA 2BU8A 5B5WA 2YYJA 2E0AA 5M4MA 1SIQA 2YYMA 3DJLA 2D29A 3C2PA 3D9FA 3FCJA 1UKWA 5K3HA 2VIGA 3GQTA 3HWCA 4L3ZA 3UBRA 3II9A 4LQQB 4E01A 2CX9A 5M4NA 1BUCA 2RFQA 2DDHA 3LGQA 1X91A 4G97A 4LQSB 3NF4A 4DZYA 4DOYA 2IX5A 1FS9A 1XFYA 3RKHA 2CJ7A 2R03A 2YYGA 3BNGA 1X90A 2Q8GA 5B6BA 4KTOA 2Q8FA 5K3JA 4Q0TA 3B96A 1RX0A 1SK6A 4P13A 4FF3A 4X28A 1Y8PA 1T9GA 3AFFA 2EBHX 2LFWA 2OJQA 3KMLA 2HJNA 2R05A 1QDBA 4J1VA 4MPEA 1FS8A 4Q1OA 3TTBA 3D9DA 4V26A 1EGEA 2QR4A 2XS1A 3MPJA 3X0YA 3CRLA 3L1TA 5M4KA 1S26A 5J71A 4X28C 1RP3A 2R0MA 3BNFA 4V25A 3MPIA 2JBSA 2BTZA 2ZKJA 4Q4UA 3SXQA 2EC5A 5B5VA 1SC5A 2RDZA 3D9GA 1JM6A 3D2RA 2R02A 4HKRA 1W07A 3S7WA 2FONA 1R3BA 4H85A 4KSAA 4IRNA 1FS7A 2E81A 1XFWA 4Q5CA 5BRKA 3OWMA 5EZ3A 4WJYA 3MKHA 1GU6A 4G5EA 3TZ4A 2XQRB 3MDEA 2ZAFA 2Q8IA 2CJ4A 5J6AA 2YYKA 3LG1A 2PNRA 1IVHA 2J7AA 1RJ1A 4MPCA 2OR0A 2YYIA 1GKXA 3SF6A 1Y8OA 3GNCA 2PO4A 2DVLA 2EBAA 1EGDA 1XFZA 2CJ5A 2RF7A 3GM6A 4E00A 4NXLA 4KS9A 2AO2A 5K3GA 1GKZA 4MP2A 4L38A 1JQIA 2Q8HA 3U33A 3D6BA 2YYLA 3F29A 2CJ6A 1XFXA 3Q24A 3SWOA 4RM7A 4H7QA 2VF1A 1GJVA 2ZDYA 2JIFA 2GBBA 2JBRA 3BNJA 5GJWE 3C3LA 3UU9A 1K90A 2AZEA 4JEKA 1OAHA 4L1FA 1XFUA 3R7KA 2BU7A 2ZO5A 4JIOA 4U83A 1XFVA 3TZ2A 4AKIA 2FP1A 4HKSA 2F6LA 1WS9A 1PI1A 1Y0VA 3MMOA 4MPNA 4Q17A 2CJ8A 3CE2A 5BRMA 4FZ4A 3OWAA 3D1IA 3Q0AA 3N0RA 1PK0A 2OEVA 2Z1QA 4M9AA 4N5FA 4AKGA 4AI6A 4ZXVA 4L3XA 3OIBA 2A1TA 2VR0A 3X0XA 1XG2B 2E80A 4AKHA 4L3YA 2EBFX 3C46A 3EONA 1K8TA 2ZDXA 2JBTA 1LVCA 4KCFA 2BU2A 3TZ5A 3VKHA 3MDDA 3EOMA 4P79A 2C12A 3SCEA 2OEXA 1RJ4A 3PFDA 2BU5A 1X8ZA 1EGCA 2OT4A 2FP2A 3Q23A 4FF4A 1Y8NA 3AFEA 1U8VA 3M9VA 3MXLA 1SIRA 4MP7A 4ZYJA 3X29A 5M4PA 2R0NA 2REHA 2UXWA 4OO2A 4KSFA 2PG0A 2C0UA 3VKGA 3VADA 1K93A 2YGWA 3D9EA 4H81A 3BNHA 1UDYA 4E02A 4F0XA 2XS8A 2WBIA 3P4TA 1IS2A 2IX6A 4Q5BA 1R2JA 5K3IA 5GJVE 4QICA 3TORA 2BU6A 3TZ0A 4O5MA 4JIZA 3FO3A 3Q22A 4FF1A 4FF2A 4W9UA 4HR3A
chains in the Genus database with same CATH topology
4IV6A 4XVXA 2YYJA 1SIQA 2YYMA 2D29A 3D9FA 3FCJA 1UKWA 5K3HA 2VIGA 3GQTA 3HWCA 4L3ZA 3UBRA 3II9A 2CX9A 1BUCA 2RFQA 2DDHA 3LGQA 3NF4A 4DOYA 2IX5A 1FS9A 3RKHA 2YYGA 3BNGA 4KTOA 5K3JA 4Q0TA 3B96A 1RX0A 4P13A 4X28A 1T9GA 3AFFA 1QDBA 1FS8A 4Q1OA 3TTBA 3D9DA 1EGEA 3MPJA 3X0YA 3L1TA 4X28C 2R0MA 3BNFA 3MPIA 2JBSA 4Q4UA 3SXQA 2RDZA 3D9GA 3S7WA 1W07A 2FONA 4IRNA 1FS7A 2E81A 4Q5CA 3OWMA 4WJYA 3MKHA 1GU6A 4G5EA 3MDEA 2ZAFA 2YYKA 3LG1A 1IVHA 2J7AA 2OR0A 2YYIA 3SF6A 3GNCA 3GM6A 2DVLA 2EBAA 1EGDA 2RF7A 4NXLA 5K3GA 4L38A 1JQIA 3D6BA 2YYLA 3F29A 3SWOA 4RM7A 2JIFA 2JBRA 3BNJA 3UU9A 4JEKA 1OAHA 4L1FA 3R7KA 2ZO5A 4U83A 1WS9A 3MMOA 4Q17A 3OWAA 3D1IA 2Z1QA 4M9AA 4N5FA 4ZXVA 4L3XA 3OIBA 2A1TA 2VR0A 3X0XA 2E80A 4L3YA 3EONA 2JBTA 4KCFA 3MDDA 3EOMA 2C12A 3SCEA 3PFDA 1EGCA 2OT4A 3AFEA 1U8VA 3M9VA 3MXLA 1SIRA 4ZYJA 2R0NA 2REHA 2UXWA 4OO2A 2PG0A 2C0UA 3D9EA 3BNHA 1UDYA 2WBIA 3P4TA 1IS2A 2IX6A 4Q5BA 1R2JA 5K3IA 3TORA 4O5MA 3FO3A 4W9UA 4HR3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IV6 A;  4XVX A;  2YYJ A;  1SIQ A;  2YYM A;  2D29 A;  3D9F A;  3FCJ A;  1UKW A;  5K3H A;  2VIG A;  3GQT A;  3HWC A;  4L3Z A;  3UBR A;  3II9 A;  2CX9 A;  1BUC A;  2RFQ A;  2DDH A;  3LGQ A;  3NF4 A;  4DOY A;  2IX5 A;  1FS9 A;  3RKH A;  2YYG A;  3BNG A;  4KTO A;  5K3J A;  4Q0T A;  3B96 A;  1RX0 A;  4P13 A;  4X28 A;  1T9G A;  3AFF A;  1QDB A;  1FS8 A;  4Q1O A;  3TTB A;  3D9D A;  1EGE A;  3MPJ A;  3X0Y A;  3L1T A;  4X28 C;  2R0M A;  3BNF A;  3MPI A;  2JBS A;  4Q4U A;  3SXQ A;  2RDZ A;  3D9G A;  3S7W A;  1W07 A;  2FON A;  4IRN A;  1FS7 A;  2E81 A;  4Q5C A;  3OWM A;  4WJY A;  3MKH A;  1GU6 A;  4G5E A;  3MDE A;  2ZAF A;  2YYK A;  3LG1 A;  1IVH A;  2J7A A;  2OR0 A;  2YYI A;  3SF6 A;  3GNC A;  3GM6 A;  2DVL A;  2EBA A;  1EGD A;  2RF7 A;  4NXL A;  5K3G A;  4L38 A;  1JQI A;  3D6B A;  2YYL A;  3F29 A;  3SWO A;  4RM7 A;  2JIF A;  2JBR A;  3BNJ A;  3UU9 A;  4JEK A;  1OAH A;  4L1F A;  3R7K A;  2ZO5 A;  4U83 A;  1WS9 A;  3MMO A;  4Q17 A;  3OWA A;  3D1I A;  2Z1Q A;  4M9A A;  4N5F A;  4ZXV A;  4L3X A;  3OIB A;  2A1T A;  2VR0 A;  3X0X A;  2E80 A;  4L3Y A;  3EON A;  2JBT A;  4KCF A;  3MDD A;  3EOM A;  2C12 A;  3SCE A;  3PFD A;  1EGC A;  2OT4 A;  3AFE A;  1U8V A;  3M9V A;  3MXL A;  1SIR A;  4ZYJ A;  2R0N A;  2REH A;  2UXW A;  4OO2 A;  2PG0 A;  2C0U A;  3D9E A;  3BNH A;  1UDY A;  2WBI A;  3P4T A;  1IS2 A;  2IX6 A;  4Q5B A;  1R2J A;  5K3I A;  3TOR A;  4O5M A;  3FO3 A;  4W9U A;  4HR3 A; 
#chains in the Genus database with same CATH topology
 3CRK A;  4IV6 A;  4XVX A;  2BU8 A;  5B5W A;  2YYJ A;  2E0A A;  5M4M A;  1SIQ A;  2YYM A;  3DJL A;  2D29 A;  3C2P A;  3D9F A;  3FCJ A;  1UKW A;  5K3H A;  2VIG A;  3GQT A;  3HWC A;  4L3Z A;  3UBR A;  3II9 A;  4LQQ B;  4E01 A;  2CX9 A;  5M4N A;  1BUC A;  2RFQ A;  2DDH A;  3LGQ A;  1X91 A;  4G97 A;  4LQS B;  3NF4 A;  4DZY A;  4DOY A;  2IX5 A;  1FS9 A;  1XFY A;  3RKH A;  2CJ7 A;  2R03 A;  2YYG A;  3BNG A;  1X90 A;  2Q8G A;  5B6B A;  4KTO A;  2Q8F A;  5K3J A;  4Q0T A;  3B96 A;  1RX0 A;  1SK6 A;  4P13 A;  4FF3 A;  4X28 A;  1Y8P A;  1T9G A;  3AFF A;  2EBH X;  2LFW A;  2OJQ A;  3KML A;  2HJN A;  2R05 A;  1QDB A;  4J1V A;  4MPE A;  1FS8 A;  4Q1O A;  3TTB A;  3D9D A;  4V26 A;  1EGE A;  2QR4 A;  2XS1 A;  3MPJ A;  3X0Y A;  3CRL A;  3L1T A;  5M4K A;  1S26 A;  5J71 A;  4X28 C;  1RP3 A;  2R0M A;  3BNF A;  4V25 A;  3MPI A;  2JBS A;  2BTZ A;  2ZKJ A;  4Q4U A;  3SXQ A;  2EC5 A;  5B5V A;  1SC5 A;  2RDZ A;  3D9G A;  1JM6 A;  3D2R A;  2R02 A;  4HKR A;  1W07 A;  3S7W A;  2FON A;  1R3B A;  4H85 A;  4KSA A;  4IRN A;  1FS7 A;  2E81 A;  1XFW A;  4Q5C A;  5BRK A;  3OWM A;  5EZ3 A;  4WJY A;  3MKH A;  1GU6 A;  4G5E A;  3TZ4 A;  2XQR B;  3MDE A;  2ZAF A;  2Q8I A;  2CJ4 A;  5J6A A;  2YYK A;  3LG1 A;  2PNR A;  1IVH A;  2J7A A;  1RJ1 A;  4MPC A;  2OR0 A;  2YYI A;  1GKX A;  3SF6 A;  1Y8O A;  3GNC A;  2PO4 A;  2DVL A;  2EBA A;  1EGD A;  1XFZ A;  2CJ5 A;  2RF7 A;  3GM6 A;  4E00 A;  4NXL A;  4KS9 A;  2AO2 A;  5K3G A;  1GKZ A;  4MP2 A;  4L38 A;  1JQI A;  2Q8H A;  3U33 A;  3D6B A;  2YYL A;  3F29 A;  2CJ6 A;  1XFX A;  3Q24 A;  3SWO A;  4RM7 A;  4H7Q A;  2VF1 A;  1GJV A;  2ZDY A;  2JIF A;  2GBB A;  2JBR A;  3BNJ A;  5GJW E;  3C3L A;  3UU9 A;  1K90 A;  2AZE A;  4JEK A;  1OAH A;  4L1F A;  1XFU A;  3R7K A;  2BU7 A;  2ZO5 A;  4JIO A;  4U83 A;  1XFV A;  3TZ2 A;  4AKI A;  2FP1 A;  4HKS A;  2F6L A;  1WS9 A;  1PI1 A;  1Y0V A;  3MMO A;  4MPN A;  4Q17 A;  2CJ8 A;  3CE2 A;  5BRM A;  4FZ4 A;  3OWA A;  3D1I A;  3Q0A A;  3N0R A;  1PK0 A;  2OEV A;  2Z1Q A;  4M9A A;  4N5F A;  4AKG A;  4AI6 A;  4ZXV A;  4L3X A;  3OIB A;  2A1T A;  2VR0 A;  3X0X A;  1XG2 B;  2E80 A;  4AKH A;  4L3Y A;  2EBF X;  3C46 A;  3EON A;  1K8T A;  2ZDX A;  2JBT A;  1LVC A;  4KCF A;  2BU2 A;  3TZ5 A;  3VKH A;  3MDD A;  3EOM A;  4P79 A;  2C12 A;  3SCE A;  2OEX A;  1RJ4 A;  3PFD A;  2BU5 A;  1X8Z A;  1EGC A;  2OT4 A;  2FP2 A;  3Q23 A;  4FF4 A;  1Y8N A;  3AFE A;  1U8V A;  3M9V A;  3MXL A;  1SIR A;  4MP7 A;  4ZYJ A;  3X29 A;  5M4P A;  2R0N A;  2REH A;  2UXW A;  4OO2 A;  4KSF A;  2PG0 A;  2C0U A;  3VKG A;  3VAD A;  1K93 A;  2YGW A;  3D9E A;  4H81 A;  3BNH A;  1UDY A;  4E02 A;  4F0X A;  2XS8 A;  2WBI A;  3P4T A;  1IS2 A;  2IX6 A;  4Q5B A;  1R2J A;  5K3I A;  5GJV E;  4QIC A;  3TOR A;  2BU6 A;  3TZ0 A;  4O5M A;  4JIZ A;  3FO3 A;  3Q22 A;  4FF1 A;  4FF2 A;  4W9U A;  4HR3 A; 
#chains in the Genus database with same CATH homology
 4IV6 A;  4XVX A;  2YYJ A;  1SIQ A;  2YYM A;  2D29 A;  3D9F A;  3FCJ A;  1UKW A;  5K3H A;  2VIG A;  3GQT A;  3HWC A;  4L3Z A;  3UBR A;  3II9 A;  2CX9 A;  1BUC A;  2RFQ A;  2DDH A;  3LGQ A;  3NF4 A;  4DOY A;  2IX5 A;  1FS9 A;  3RKH A;  2YYG A;  3BNG A;  4KTO A;  5K3J A;  4Q0T A;  3B96 A;  1RX0 A;  4P13 A;  4X28 A;  1T9G A;  3AFF A;  1QDB A;  1FS8 A;  4Q1O A;  3TTB A;  3D9D A;  1EGE A;  3MPJ A;  3X0Y A;  3L1T A;  4X28 C;  2R0M A;  3BNF A;  3MPI A;  2JBS A;  4Q4U A;  3SXQ A;  2RDZ A;  3D9G A;  3S7W A;  1W07 A;  2FON A;  4IRN A;  1FS7 A;  2E81 A;  4Q5C A;  3OWM A;  4WJY A;  3MKH A;  1GU6 A;  4G5E A;  3MDE A;  2ZAF A;  2YYK A;  3LG1 A;  1IVH A;  2J7A A;  2OR0 A;  2YYI A;  3SF6 A;  3GNC A;  3GM6 A;  2DVL A;  2EBA A;  1EGD A;  2RF7 A;  4NXL A;  5K3G A;  4L38 A;  1JQI A;  3D6B A;  2YYL A;  3F29 A;  3SWO A;  4RM7 A;  2JIF A;  2JBR A;  3BNJ A;  3UU9 A;  4JEK A;  1OAH A;  4L1F A;  3R7K A;  2ZO5 A;  4U83 A;  1WS9 A;  3MMO A;  4Q17 A;  3OWA A;  3D1I A;  2Z1Q A;  4M9A A;  4N5F A;  4ZXV A;  4L3X A;  3OIB A;  2A1T A;  2VR0 A;  3X0X A;  2E80 A;  4L3Y A;  3EON A;  2JBT A;  4KCF A;  3MDD A;  3EOM A;  2C12 A;  3SCE A;  3PFD A;  1EGC A;  2OT4 A;  3AFE A;  1U8V A;  3M9V A;  3MXL A;  1SIR A;  4ZYJ A;  2R0N A;  2REH A;  2UXW A;  4OO2 A;  2PG0 A;  2C0U A;  3D9E A;  3BNH A;  1UDY A;  2WBI A;  3P4T A;  1IS2 A;  2IX6 A;  4Q5B A;  1R2J A;  5K3I A;  3TOR A;  4O5M A;  3FO3 A;  4W9U A;  4HR3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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