1X91A

Crystal structure of mutant form a of a pectin methylesterase inhibitor from arabidopsis
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
149
structure length
149
Chain Sequence
SSEMSTICDKTLNPSFCLKFLNTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNMLPRN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Protein binding
source organism Arabidopsis thaliana
publication title Structural insights into the target specificity of plant invertase and pectin methylesterase inhibitory proteins
pubmed doi rcsb
molecule keywords invertase/pectin methylesterase inhibitor family protein
total genus 64
structure length 149
sequence length 149
ec nomenclature
pdb deposition date 2004-08-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04043 PMEI Plant invertase/pectin methylesterase inhibitor
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.140.40 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Invertase/pectin methylesterase inhibitor family protein 1x91A00
2CJ7A 2XQRB 1RJ1A 2CJ8A 2CJ5A 1X90A 1X8ZA 1XG2B 2CJ6A 1RJ4A 2CJ4A 1X91A
chains in the Genus database with same CATH superfamily
2UXWA 4L3XA 2E0AA 3VADA 2WBIA 4JEKA 4HR3A 4J1VA 1Y8NA 2Q8HA 1XG2B 3MMOA 1GKZA 1FS7A 1OAHA 2A1TA 2C0UA 2CJ4A 4FF3A 5M4PA 2REHA 4MP7A 3P4TA 2DVLA 1WS9A 4JIOA 4DZYA 4AI6A 3BNGA 4Q5CA 1FS9A 1BUCA 1QDBA 3D9DA 3UU9A 2AO2A 1R3BA 1T9GA 2JIFA 4V25A 5M4NA 3EOMA 2IX6A 4KSAA 4L3ZA 3MPJA 5B5VA 2EBAA 1JM6A 1U8VA 2CJ5A 4ZYJA 1XFXA 2J7AA 2LFWA 2EBHX 1Y0VA 4KCFA 4O5MA 2Q8IA 5M4MA 2GBBA 3LG1A 1RP3A 1XFWA 2R05A 2YYMA 1R2JA 3OWAA 2YGWA 3TTBA 3LGQA 3GM6A 1SIQA 3MDDA 5J71A 4FZ4A 4L1FA 4Q4UA 3RKHA 4Q17A 2VR0A 1X91A 2VIGA 1GJVA 2BU2A 3EONA 2FP1A 2RFQA 2Q8GA 3Q22A 1SIRA 3AFFA 3S7WA 3D2RA 1EGDA 3MXLA 3OWMA 3SXQA 3M9VA 3D6BA 4E00A 1FS8A 2ZKJA 2R0NA 4P79A 2YYGA 4XVXA 3TORA 2HJNA 3X29A 2R0MA 3MDEA 3X0YA 2FONA 4ZXVA 2PG0A 4KSFA 3FCJA 3BNJA 4X28A 3D9GA 1Y8OA 3X0XA 2F6LA 3GNCA 4F0XA 5GJVE 1JQIA 4KS9A 2CJ8A 4AKGA 1SK6A 4IRNA 3NF4A 5B5WA 5B6BA 1RJ4A 4NXLA 4U83A 4OO2A 1XFYA 2CX9A 3D9FA 4X28C 4AKIA 2CJ7A 4MPCA 5J6AA 2E81A 2OEVA 2FP2A 5GJWE 1K93A 5BRKA 1XFZA 3R7KA 4HKSA 1K8TA 3HWCA 1EGCA 2XQRB 3PFDA 3L1TA 4MPNA 4MPEA 1X8ZA 4DOYA 2E80A 4Q1OA 2ZDYA 4KTOA 4WJYA 2BU5A 2DDHA 4LQQB 1W07A 4LQSB 3TZ5A 2AZEA 2ZO5A 3BNFA 3FO3A 4MP2A 2IX5A 2YYLA 2QR4A 2OEXA 4H85A 1K90A 5K3GA 2R03A 3CE2A 3C46A 1XFVA 4AKHA 4JIZA 2VF1A 1UKWA 2XS1A 1RX0A 2JBSA 4V26A 4FF1A 5K3IA 2BU6A 3D9EA 3CRLA 3UBRA 3VKGA 1PK0A 1S26A 3F29A 3MKHA 2YYIA 4H7QA 4Q0TA 5BRMA 2JBTA 1LVCA 2PO4A 4Q5BA 3B96A 3GQTA 4QICA 1Y8PA 3Q24A 1RJ1A 1UDYA 1X90A 1GKXA 3OIBA 4E01A 3Q0AA 1IVHA 2D29A 2ZDXA 2R02A 3AFEA 2EC5A 3CRKA 3D1IA 4G5EA 4L3YA 5K3JA 3SWOA 3C2PA 3SCEA 3C3LA 1PI1A 2C12A 2OR0A 3KMLA 4FF2A 2RF7A 4G97A 3VKHA 2BU8A 2EBFX 2YYKA 1GU6A 4E02A 5M4KA 3Q23A 1IS2A 4M9AA 2Q8FA 3BNHA 2BU7A 2YYJA 2PNRA 2RDZA 4L38A 3SF6A 3TZ2A 4W9UA 4FF4A 2ZAFA 2CJ6A 1SC5A 2JBRA 4IV6A 3TZ0A 3TZ4A 4N5FA 4RM7A 2XS8A 2OT4A 1XFUA 2OJQA 4HKRA 3II9A 3MPIA 4H81A 1EGEA 3N0RA 2BTZA 5K3HA 4P13A 2Z1QA
chains in the Genus database with same CATH topology
2CJ7A 2XQRB 1RJ1A 2CJ8A 2CJ5A 1X90A 1X8ZA 1XG2B 2CJ6A 1RJ4A 2CJ4A 1X91A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2CJ7 A;  2XQR B;  1RJ1 A;  2CJ8 A;  2CJ5 A;  1X90 A;  1X8Z A;  1XG2 B;  2CJ6 A;  1RJ4 A;  2CJ4 A;  1X91 A; 
#chains in the Genus database with same CATH topology
 2UXW A;  4L3X A;  2E0A A;  3VAD A;  2WBI A;  4JEK A;  4HR3 A;  4J1V A;  1Y8N A;  2Q8H A;  1XG2 B;  3MMO A;  1GKZ A;  1FS7 A;  1OAH A;  2A1T A;  2C0U A;  2CJ4 A;  4FF3 A;  5M4P A;  2REH A;  4MP7 A;  3P4T A;  2DVL A;  1WS9 A;  4JIO A;  4DZY A;  4AI6 A;  3BNG A;  4Q5C A;  1FS9 A;  1BUC A;  1QDB A;  3D9D A;  3UU9 A;  2AO2 A;  1R3B A;  1T9G A;  2JIF A;  4V25 A;  5M4N A;  3EOM A;  2IX6 A;  4KSA A;  4L3Z A;  3MPJ A;  5B5V A;  2EBA A;  1JM6 A;  1U8V A;  2CJ5 A;  4ZYJ A;  1XFX A;  2J7A A;  2LFW A;  2EBH X;  1Y0V A;  4KCF A;  4O5M A;  2Q8I A;  5M4M A;  2GBB A;  3LG1 A;  1RP3 A;  1XFW A;  2R05 A;  2YYM A;  1R2J A;  3OWA A;  2YGW A;  3TTB A;  3LGQ A;  3GM6 A;  1SIQ A;  3MDD A;  5J71 A;  4FZ4 A;  4L1F A;  4Q4U A;  3RKH A;  4Q17 A;  2VR0 A;  1X91 A;  2VIG A;  1GJV A;  2BU2 A;  3EON A;  2FP1 A;  2RFQ A;  2Q8G A;  3Q22 A;  1SIR A;  3AFF A;  3S7W A;  3D2R A;  1EGD A;  3MXL A;  3OWM A;  3SXQ A;  3M9V A;  3D6B A;  4E00 A;  1FS8 A;  2ZKJ A;  2R0N A;  4P79 A;  2YYG A;  4XVX A;  3TOR A;  2HJN A;  3X29 A;  2R0M A;  3MDE A;  3X0Y A;  2FON A;  4ZXV A;  2PG0 A;  4KSF A;  3FCJ A;  3BNJ A;  4X28 A;  3D9G A;  1Y8O A;  3X0X A;  2F6L A;  3GNC A;  4F0X A;  5GJV E;  1JQI A;  4KS9 A;  2CJ8 A;  4AKG A;  1SK6 A;  4IRN A;  3NF4 A;  5B5W A;  5B6B A;  1RJ4 A;  4NXL A;  4U83 A;  4OO2 A;  1XFY A;  2CX9 A;  3D9F A;  4X28 C;  4AKI A;  2CJ7 A;  4MPC A;  5J6A A;  2E81 A;  2OEV A;  2FP2 A;  5GJW E;  1K93 A;  5BRK A;  1XFZ A;  3R7K A;  4HKS A;  1K8T A;  3HWC A;  1EGC A;  2XQR B;  3PFD A;  3L1T A;  4MPN A;  4MPE A;  1X8Z A;  4DOY A;  2E80 A;  4Q1O A;  2ZDY A;  4KTO A;  4WJY A;  2BU5 A;  2DDH A;  4LQQ B;  1W07 A;  4LQS B;  3TZ5 A;  2AZE A;  2ZO5 A;  3BNF A;  3FO3 A;  4MP2 A;  2IX5 A;  2YYL A;  2QR4 A;  2OEX A;  4H85 A;  1K90 A;  5K3G A;  2R03 A;  3CE2 A;  3C46 A;  1XFV A;  4AKH A;  4JIZ A;  2VF1 A;  1UKW A;  2XS1 A;  1RX0 A;  2JBS A;  4V26 A;  4FF1 A;  5K3I A;  2BU6 A;  3D9E A;  3CRL A;  3UBR A;  3VKG A;  1PK0 A;  1S26 A;  3F29 A;  3MKH A;  2YYI A;  4H7Q A;  4Q0T A;  5BRM A;  2JBT A;  1LVC A;  2PO4 A;  4Q5B A;  3B96 A;  3GQT A;  4QIC A;  1Y8P A;  3Q24 A;  1RJ1 A;  1UDY A;  1X90 A;  1GKX A;  3OIB A;  4E01 A;  3Q0A A;  1IVH A;  2D29 A;  2ZDX A;  2R02 A;  3AFE A;  2EC5 A;  3CRK A;  3D1I A;  4G5E A;  4L3Y A;  5K3J A;  3SWO A;  3C2P A;  3SCE A;  3C3L A;  1PI1 A;  2C12 A;  2OR0 A;  3KML A;  4FF2 A;  2RF7 A;  4G97 A;  3VKH A;  2BU8 A;  2EBF X;  2YYK A;  1GU6 A;  4E02 A;  5M4K A;  3Q23 A;  1IS2 A;  4M9A A;  2Q8F A;  3BNH A;  2BU7 A;  2YYJ A;  2PNR A;  2RDZ A;  4L38 A;  3SF6 A;  3TZ2 A;  4W9U A;  4FF4 A;  2ZAF A;  2CJ6 A;  1SC5 A;  2JBR A;  4IV6 A;  3TZ0 A;  3TZ4 A;  4N5F A;  4RM7 A;  2XS8 A;  2OT4 A;  1XFU A;  2OJQ A;  4HKR A;  3II9 A;  3MPI A;  4H81 A;  1EGE A;  3N0R A;  2BTZ A;  5K3H A;  4P13 A;  2Z1Q A; 
#chains in the Genus database with same CATH homology
 2CJ7 A;  2XQR B;  1RJ1 A;  2CJ8 A;  2CJ5 A;  1X90 A;  1X8Z A;  1XG2 B;  2CJ6 A;  1RJ4 A;  2CJ4 A;  1X91 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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