1X91A

Crystal structure of mutant form a of a pectin methylesterase inhibitor from arabidopsis
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
149
structure length
149
Chain Sequence
SSEMSTICDKTLNPSFCLKFLNTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRLRSVDSSVVNNSKTIKNLCGIALVISNMLPRN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Protein binding
source organism Arabidopsis thaliana
publication title Structural insights into the target specificity of plant invertase and pectin methylesterase inhibitory proteins
pubmed doi rcsb
molecule keywords invertase/pectin methylesterase inhibitor family protein
total genus 64
structure length 149
sequence length 149
ec nomenclature
pdb deposition date 2004-08-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04043 PMEI Plant invertase/pectin methylesterase inhibitor
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.140.40 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Invertase/pectin methylesterase inhibitor family protein 1x91A00
1X90A 1RJ4A 1X91A 2CJ4A 2CJ7A 2CJ8A 1XG2B 2XQRB 1RJ1A 2CJ5A 2CJ6A 1X8ZA
chains in the Genus database with same CATH superfamily
2IX6A 3OIBA 4KCFA 4W9UA 2XQRB 4H81A 4NXLA 1Y0VA 1QDBA 5BRKA 4E01A 2OEVA 2VIGA 4RM7A 1XFYA 2AZEA 4E02A 2ZDYA 2EBAA 2JBRA 4LQSB 4G97A 1UDYA 2PNRA 4J1VA 1WS9A 2R0NA 3MPJA 1EGEA 4OO2A 4P13A 4V26A 1PK0A 1SC5A 1K93A 5B6BA 4FF1A 3GQTA 2RDZA 4L38A 1Y8OA 1X91A 2PO4A 3D1IA 2BU7A 3VKHA 3II9A 1W07A 3PFDA 2JBTA 3UU9A 2EBFX 1RP3A 4KTOA 3TZ5A 2LFWA 2YYGA 4JIOA 2CJ4A 3AFEA 4Q1OA 4X28A 2R05A 1SK6A 3GNCA 4HKSA 5K3IA 4AKIA 5BRMA 4DOYA 1IVHA 2RFQA 5M4KA 3UBRA 1Y8NA 5B5VA 2R03A 3EOMA 4L3XA 3D9EA 4V25A 3C2PA 4Q0TA 2ZO5A 4KSFA 1PI1A 4H85A 3TTBA 3Q24A 2J7AA 3B96A 1SIRA 2A1TA 2JBSA 2VF1A 2CX9A 3EONA 2ZKJA 1XG2B 4FF2A 4JEKA 3TORA 5GJVE 3OWAA 1T9GA 5M4PA 4Q17A 2C0UA 3Q23A 4F0XA 4DZYA 3SXQA 3CRKA 3S7WA 1RJ1A 1K8TA 2Q8IA 1JM6A 2UXWA 2YYMA 1XFWA 3N0RA 4M9AA 1FS7A 1FS9A 3BNJA 2BU5A 3GM6A 3X0XA 4U83A 2CJ8A 3D9FA 2ZAFA 4X28C 2DDHA 2AO2A 1Y8PA 4Q5BA 1GJVA 3TZ2A 3RKHA 2Q8HA 4KSAA 2CJ6A 1XFZA 1X8ZA 3HWCA 3TZ0A 3FCJA 3MDDA 2OEXA 1EGDA 2BU6A 2EC5A 2YYLA 3CRLA 2FP2A 3CE2A 2REHA 4G5EA 1JQIA 1XFUA 2YYKA 5M4NA 1RJ4A 4L3ZA 1XFXA 4HKRA 4MP2A 3BNFA 5J71A 1BUCA 2BU2A 4ZXVA 2Q8GA 4E00A 2OT4A 1XFVA 3TZ4A 4IRNA 4ZYJA 3D9GA 4MPNA 2D29A 2E80A 4AKHA 2HJNA 2R02A 1OAHA 1IS2A 2EBHX 2YYIA 3BNGA 3D6BA 3AFFA 2DVLA 4MPCA 4P79A 4O5MA 3L1TA 1GU6A 3M9VA 3MDEA 2XS8A 5K3HA 1RX0A 2E0AA 3MMOA 2VR0A 4H7QA 2BU8A 4JIZA 3LGQA 4HR3A 3SF6A 2Q8FA 2ZDXA 3P4TA 2F6LA 2YYJA 1U8VA 2XS1A 4XVXA 4QICA 2WBIA 4MPEA 4FF4A 1SIQA 3OWMA 4Q5CA 4AKGA 3NF4A 3R7KA 4L1FA 4AI6A 2YGWA 2CJ5A 2OR0A 4KS9A 3BNHA 1GKZA 2JIFA 3D2RA 2C12A 3FO3A 3Q0AA 5K3JA 5GJWE 4L3YA 5M4MA 3SWOA 3D9DA 3MXLA 3X29A 5J6AA 2R0MA 2QR4A 1UKWA 1LVCA 1R3BA 2IX5A 3KMLA 4FZ4A 2E81A 4Q4UA 4WJYA 2Z1QA 3SCEA 3C46A 2FP1A 3VKGA 3LG1A 2RF7A 2CJ7A 3F29A 4FF3A 3C3LA 3Q22A 2PG0A 1S26A 2BTZA 1K90A 3VADA 5B5WA 5K3GA 4MP7A 4IV6A 1X90A 4LQQB 4N5FA 1R2JA 1FS8A 2FONA 3MKHA 3MPIA 1GKXA 3X0YA 2GBBA 1EGCA 2OJQA
chains in the Genus database with same CATH topology
1X90A 1RJ4A 1X91A 2CJ4A 2CJ7A 2CJ8A 1XG2B 2XQRB 1RJ1A 2CJ5A 2CJ6A 1X8ZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1X90 A;  1RJ4 A;  1X91 A;  2CJ4 A;  2CJ7 A;  2CJ8 A;  1XG2 B;  2XQR B;  1RJ1 A;  2CJ5 A;  2CJ6 A;  1X8Z A; 
#chains in the Genus database with same CATH topology
 2IX6 A;  3OIB A;  4KCF A;  4W9U A;  2XQR B;  4H81 A;  4NXL A;  1Y0V A;  1QDB A;  5BRK A;  4E01 A;  2OEV A;  2VIG A;  4RM7 A;  1XFY A;  2AZE A;  4E02 A;  2ZDY A;  2EBA A;  2JBR A;  4LQS B;  4G97 A;  1UDY A;  2PNR A;  4J1V A;  1WS9 A;  2R0N A;  3MPJ A;  1EGE A;  4OO2 A;  4P13 A;  4V26 A;  1PK0 A;  1SC5 A;  1K93 A;  5B6B A;  4FF1 A;  3GQT A;  2RDZ A;  4L38 A;  1Y8O A;  1X91 A;  2PO4 A;  3D1I A;  2BU7 A;  3VKH A;  3II9 A;  1W07 A;  3PFD A;  2JBT A;  3UU9 A;  2EBF X;  1RP3 A;  4KTO A;  3TZ5 A;  2LFW A;  2YYG A;  4JIO A;  2CJ4 A;  3AFE A;  4Q1O A;  4X28 A;  2R05 A;  1SK6 A;  3GNC A;  4HKS A;  5K3I A;  4AKI A;  5BRM A;  4DOY A;  1IVH A;  2RFQ A;  5M4K A;  3UBR A;  1Y8N A;  5B5V A;  2R03 A;  3EOM A;  4L3X A;  3D9E A;  4V25 A;  3C2P A;  4Q0T A;  2ZO5 A;  4KSF A;  1PI1 A;  4H85 A;  3TTB A;  3Q24 A;  2J7A A;  3B96 A;  1SIR A;  2A1T A;  2JBS A;  2VF1 A;  2CX9 A;  3EON A;  2ZKJ A;  1XG2 B;  4FF2 A;  4JEK A;  3TOR A;  5GJV E;  3OWA A;  1T9G A;  5M4P A;  4Q17 A;  2C0U A;  3Q23 A;  4F0X A;  4DZY A;  3SXQ A;  3CRK A;  3S7W A;  1RJ1 A;  1K8T A;  2Q8I A;  1JM6 A;  2UXW A;  2YYM A;  1XFW A;  3N0R A;  4M9A A;  1FS7 A;  1FS9 A;  3BNJ A;  2BU5 A;  3GM6 A;  3X0X A;  4U83 A;  2CJ8 A;  3D9F A;  2ZAF A;  4X28 C;  2DDH A;  2AO2 A;  1Y8P A;  4Q5B A;  1GJV A;  3TZ2 A;  3RKH A;  2Q8H A;  4KSA A;  2CJ6 A;  1XFZ A;  1X8Z A;  3HWC A;  3TZ0 A;  3FCJ A;  3MDD A;  2OEX A;  1EGD A;  2BU6 A;  2EC5 A;  2YYL A;  3CRL A;  2FP2 A;  3CE2 A;  2REH A;  4G5E A;  1JQI A;  1XFU A;  2YYK A;  5M4N A;  1RJ4 A;  4L3Z A;  1XFX A;  4HKR A;  4MP2 A;  3BNF A;  5J71 A;  1BUC A;  2BU2 A;  4ZXV A;  2Q8G A;  4E00 A;  2OT4 A;  1XFV A;  3TZ4 A;  4IRN A;  4ZYJ A;  3D9G A;  4MPN A;  2D29 A;  2E80 A;  4AKH A;  2HJN A;  2R02 A;  1OAH A;  1IS2 A;  2EBH X;  2YYI A;  3BNG A;  3D6B A;  3AFF A;  2DVL A;  4MPC A;  4P79 A;  4O5M A;  3L1T A;  1GU6 A;  3M9V A;  3MDE A;  2XS8 A;  5K3H A;  1RX0 A;  2E0A A;  3MMO A;  2VR0 A;  4H7Q A;  2BU8 A;  4JIZ A;  3LGQ A;  4HR3 A;  3SF6 A;  2Q8F A;  2ZDX A;  3P4T A;  2F6L A;  2YYJ A;  1U8V A;  2XS1 A;  4XVX A;  4QIC A;  2WBI A;  4MPE A;  4FF4 A;  1SIQ A;  3OWM A;  4Q5C A;  4AKG A;  3NF4 A;  3R7K A;  4L1F A;  4AI6 A;  2YGW A;  2CJ5 A;  2OR0 A;  4KS9 A;  3BNH A;  1GKZ A;  2JIF A;  3D2R A;  2C12 A;  3FO3 A;  3Q0A A;  5K3J A;  5GJW E;  4L3Y A;  5M4M A;  3SWO A;  3D9D A;  3MXL A;  3X29 A;  5J6A A;  2R0M A;  2QR4 A;  1UKW A;  1LVC A;  1R3B A;  2IX5 A;  3KML A;  4FZ4 A;  2E81 A;  4Q4U A;  4WJY A;  2Z1Q A;  3SCE A;  3C46 A;  2FP1 A;  3VKG A;  3LG1 A;  2RF7 A;  2CJ7 A;  3F29 A;  4FF3 A;  3C3L A;  3Q22 A;  2PG0 A;  1S26 A;  2BTZ A;  1K90 A;  3VAD A;  5B5W A;  5K3G A;  4MP7 A;  4IV6 A;  1X90 A;  4LQQ B;  4N5F A;  1R2J A;  1FS8 A;  2FON A;  3MKH A;  3MPI A;  1GKX A;  3X0Y A;  2GBB A;  1EGC A;  2OJQ A; 
#chains in the Genus database with same CATH homology
 1X90 A;  1RJ4 A;  1X91 A;  2CJ4 A;  2CJ7 A;  2CJ8 A;  1XG2 B;  2XQR B;  1RJ1 A;  2CJ5 A;  2CJ6 A;  1X8Z A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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