2XQR | Genus

Total Genus 55

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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	55
sequence length	146
structure length	146
Chain Sequence	NLVETTCKNTPNYQLCLKTLLSDKRSATGDITTLALIMVDAIKAKANQAAVTISKLRHSNPPAAWKGPLKNCAFSYKVILTASLPEAIEALTKGDPKFAEDGMVGSSGDAQECEEYFKGSKSPFSALNIAVHELSDVGRAIVRNLL

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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Hydrolase/inhibitor
source organism	Arabidopsis thaliana
publication title	Structural Insights Into the Ph-Controlled Targeting of Plant Cell-Wall Invertase by a Specific Inhibitor Protein. pubmed doi rcsb
molecule keywords	BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1
total genus	55
structure length	146
sequence length	146
chains with identical sequence	D, F, H, J, L
ec nomenclature
pdb deposition date	2010-09-07

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
B	PF04043	PMEI	Plant invertase/pectin methylesterase inhibitor

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
1.20.140.40	Mainly Alpha	Up-down Bundle	Butyryl-CoA Dehydrogenase, subunit A; domain 3	Invertase/pectin methylesterase inhibitor family protein	2xqrB00

2CJ8A 2CJ7A 1X91A 2CJ4A 1RJ4A 1XG2B 1X8ZA 2CJ5A 1RJ1A 2CJ6A 2XQRB 1X90A
chains in the Genus database with same CATH superfamily

4RM7A 3SCEA 3R7KA 1GKXA 3C46A 2ZKJA 2E81A 2EC5A 2A1TA 1RP3A 2R02A 2C0UA 2CJ6A 3SXQA 4QICA 5GJVE 1Y8NA 5BRMA 5M4KA 3P4TA 1X91A 2CJ4A 3D9DA 4IV6A 1JQIA 2JBTA 4Q0TA 4X28C 5K3JA 1EGEA 3EOMA 3TZ5A 2ZAFA 3FO3A 2FP2A 3MDEA 4FF3A 4L38A 4FF2A 3VADA 2YYIA 1R3BA 2LFWA 3D9EA 3S7WA 4H85A 1PK0A 1XG2B 4V26A 1GKZA 4OO2A 4IRNA 1FS8A 2BU8A 2BU5A 1Y0VA 2YYKA 4MPNA 2REHA 2F6LA 2RDZA 4MP7A 2FONA 1SK6A 2CJ5A 4J1VA 1S26A 2OEXA 1RJ1A 2Q8FA 5M4MA 1WS9A 5K3IA 5J6AA 2D29A 3Q0AA 2YYMA 3II9A 3MPJA 2YYGA 4N5FA 2DDHA 3M9VA 3AFFA 4AKIA 2ZO5A 2CJ8A 4Q5BA 4V25A 4AKGA 4FF1A 3B96A 3L1TA 1RJ4A 3UU9A 3UBRA 1GU6A 1XFWA 2IX5A 3KMLA 4NXLA 4F0XA 3BNJA 2EBFX 2PO4A 4W9UA 1XFXA 1IS2A 2XS1A 4HKSA 2RFQA 3RKHA 2YYJA 4U83A 3X29A 3X0YA 1EGDA 4MPEA 2JBRA 4JIOA 1UKWA 4JIZA 2VF1A 3X0XA 5K3GA 3LG1A 1BUCA 3MMOA 4ZYJA 4M9AA 2JIFA 3CRLA 1QDBA 1U8VA 2BTZA 3D6BA 3MPIA 4DZYA 3MDDA 4L1FA 4ZXVA 5M4PA 3VKHA 2CJ7A 1X90A 2PG0A 2AZEA 1K93A 2E80A 2PNRA 3BNFA 3BNGA 3D1IA 3N0RA 1SC5A 2QR4A 4KCFA 1XFYA 2DVLA 4KSFA 4XVXA 1K8TA 1W07A 2HJNA 2R0NA 2EBAA 4LQSB 3OWAA 2XS8A 1OAHA 2OEVA 3D9FA 2Q8IA 2AO2A 2UXWA 2GBBA 3MKHA 2Q8HA 3Q23A 4P79A 4H7QA 3Q22A 2ZDYA 3EONA 1SIQA 1XFZA 3Q24A 5M4NA 1LVCA 1IVHA 2Q8GA 3C2PA 4Q5CA 4E02A 3D2RA 5BRKA 2OR0A 4AI6A 2J7AA 2YYLA 3HWCA 1XFUA 4P13A 2ZDXA 4KS9A 1R2JA 4G97A 4Q1OA 5B5WA 3GNCA 3GM6A 3OIBA 4L3XA 1JM6A 2R03A 3D9GA 4HR3A 4KTOA 2Z1QA 4Q17A 3GQTA 3TTBA 4H81A 5K3HA 2BU7A 2WBIA 3SWOA 2E0AA 2JBSA 4JEKA 4Q4UA 2BU6A 3F29A 3LGQA 1X8ZA 4MP2A 3TZ0A 5J71A 1Y8PA 2XQRB 1K90A 1Y8OA 1FS7A 2EBHX 2R0MA 4WJYA 4L3YA 4X28A 1T9GA 3OWMA 1EGCA 2C12A 4KSAA 1PI1A 2BU2A 2R05A 3PFDA 3C3LA 3CE2A 3NF4A 3BNHA 4L3ZA 4O5MA 2RF7A 4FZ4A 3TORA 3TZ4A 1FS9A 2FP1A 4HKRA 4AKHA 4LQQB 1UDYA 1SIRA 5GJWE 2OT4A 4DOYA 3CRKA 4G5EA 1XFVA 4E00A 2CX9A 2VR0A 3MXLA 2IX6A 2YGWA 3AFEA 4E01A 2OJQA 5B5VA 5B6BA 3FCJA 3TZ2A 3VKGA 3SF6A 1RX0A 1GJVA 4FF4A 4MPCA 2VIGA
chains in the Genus database with same CATH topology

2CJ8A 2CJ7A 1X91A 2CJ4A 1RJ4A 1XG2B 1X8ZA 2CJ5A 1RJ1A 2CJ6A 2XQRB 1X90A
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 2CJ8 A;  2CJ7 A;  1X91 A;  2CJ4 A;  1RJ4 A;  1XG2 B;  1X8Z A;  2CJ5 A;  1RJ1 A;  2CJ6 A;  2XQR B;  1X90 A; 
#chains in the Genus database with same CATH topology
 4RM7 A;  3SCE A;  3R7K A;  1GKX A;  3C46 A;  2ZKJ A;  2E81 A;  2EC5 A;  2A1T A;  1RP3 A;  2R02 A;  2C0U A;  2CJ6 A;  3SXQ A;  4QIC A;  5GJV E;  1Y8N A;  5BRM A;  5M4K A;  3P4T A;  1X91 A;  2CJ4 A;  3D9D A;  4IV6 A;  1JQI A;  2JBT A;  4Q0T A;  4X28 C;  5K3J A;  1EGE A;  3EOM A;  3TZ5 A;  2ZAF A;  3FO3 A;  2FP2 A;  3MDE A;  4FF3 A;  4L38 A;  4FF2 A;  3VAD A;  2YYI A;  1R3B A;  2LFW A;  3D9E A;  3S7W A;  4H85 A;  1PK0 A;  1XG2 B;  4V26 A;  1GKZ A;  4OO2 A;  4IRN A;  1FS8 A;  2BU8 A;  2BU5 A;  1Y0V A;  2YYK A;  4MPN A;  2REH A;  2F6L A;  2RDZ A;  4MP7 A;  2FON A;  1SK6 A;  2CJ5 A;  4J1V A;  1S26 A;  2OEX A;  1RJ1 A;  2Q8F A;  5M4M A;  1WS9 A;  5K3I A;  5J6A A;  2D29 A;  3Q0A A;  2YYM A;  3II9 A;  3MPJ A;  2YYG A;  4N5F A;  2DDH A;  3M9V A;  3AFF A;  4AKI A;  2ZO5 A;  2CJ8 A;  4Q5B A;  4V25 A;  4AKG A;  4FF1 A;  3B96 A;  3L1T A;  1RJ4 A;  3UU9 A;  3UBR A;  1GU6 A;  1XFW A;  2IX5 A;  3KML A;  4NXL A;  4F0X A;  3BNJ A;  2EBF X;  2PO4 A;  4W9U A;  1XFX A;  1IS2 A;  2XS1 A;  4HKS A;  2RFQ A;  3RKH A;  2YYJ A;  4U83 A;  3X29 A;  3X0Y A;  1EGD A;  4MPE A;  2JBR A;  4JIO A;  1UKW A;  4JIZ A;  2VF1 A;  3X0X A;  5K3G A;  3LG1 A;  1BUC A;  3MMO A;  4ZYJ A;  4M9A A;  2JIF A;  3CRL A;  1QDB A;  1U8V A;  2BTZ A;  3D6B A;  3MPI A;  4DZY A;  3MDD A;  4L1F A;  4ZXV A;  5M4P A;  3VKH A;  2CJ7 A;  1X90 A;  2PG0 A;  2AZE A;  1K93 A;  2E80 A;  2PNR A;  3BNF A;  3BNG A;  3D1I A;  3N0R A;  1SC5 A;  2QR4 A;  4KCF A;  1XFY A;  2DVL A;  4KSF A;  4XVX A;  1K8T A;  1W07 A;  2HJN A;  2R0N A;  2EBA A;  4LQS B;  3OWA A;  2XS8 A;  1OAH A;  2OEV A;  3D9F A;  2Q8I A;  2AO2 A;  2UXW A;  2GBB A;  3MKH A;  2Q8H A;  3Q23 A;  4P79 A;  4H7Q A;  3Q22 A;  2ZDY A;  3EON A;  1SIQ A;  1XFZ A;  3Q24 A;  5M4N A;  1LVC A;  1IVH A;  2Q8G A;  3C2P A;  4Q5C A;  4E02 A;  3D2R A;  5BRK A;  2OR0 A;  4AI6 A;  2J7A A;  2YYL A;  3HWC A;  1XFU A;  4P13 A;  2ZDX A;  4KS9 A;  1R2J A;  4G97 A;  4Q1O A;  5B5W A;  3GNC A;  3GM6 A;  3OIB A;  4L3X A;  1JM6 A;  2R03 A;  3D9G A;  4HR3 A;  4KTO A;  2Z1Q A;  4Q17 A;  3GQT A;  3TTB A;  4H81 A;  5K3H A;  2BU7 A;  2WBI A;  3SWO A;  2E0A A;  2JBS A;  4JEK A;  4Q4U A;  2BU6 A;  3F29 A;  3LGQ A;  1X8Z A;  4MP2 A;  3TZ0 A;  5J71 A;  1Y8P A;  2XQR B;  1K90 A;  1Y8O A;  1FS7 A;  2EBH X;  2R0M A;  4WJY A;  4L3Y A;  4X28 A;  1T9G A;  3OWM A;  1EGC A;  2C12 A;  4KSA A;  1PI1 A;  2BU2 A;  2R05 A;  3PFD A;  3C3L A;  3CE2 A;  3NF4 A;  3BNH A;  4L3Z A;  4O5M A;  2RF7 A;  4FZ4 A;  3TOR A;  3TZ4 A;  1FS9 A;  2FP1 A;  4HKR A;  4AKH A;  4LQQ B;  1UDY A;  1SIR A;  5GJW E;  2OT4 A;  4DOY A;  3CRK A;  4G5E A;  1XFV A;  4E00 A;  2CX9 A;  2VR0 A;  3MXL A;  2IX6 A;  2YGW A;  3AFE A;  4E01 A;  2OJQ A;  5B5V A;  5B6B A;  3FCJ A;  3TZ2 A;  3VKG A;  3SF6 A;  1RX0 A;  1GJV A;  4FF4 A;  4MPC A;  2VIG A; 
#chains in the Genus database with same CATH homology
 2CJ8 A;  2CJ7 A;  1X91 A;  2CJ4 A;  1RJ4 A;  1XG2 B;  1X8Z A;  2CJ5 A;  1RJ1 A;  2CJ6 A;  2XQR B;  1X90 A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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2XQRB

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations