4FZ4A

Crystal structure of hp0197-18kd
Total Genus 65

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
65
sequence length
154
structure length
154
Chain Sequence
EAMAKVEEVQKVVKELEKELGELDKVPSYGDAQDYSYQKALWEEFLRIGKDNMDYASKMKADDKFFHKVKGDLNDFKYQIKVENYIRQVAELRKKYPGDNTIEEEYNAHLKQDEGKSIASQEGATLRDYVDREASEAMGRIKQRVAELEILEHH
2040608010012014014012010080604020
0102030405060Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
3H1 (83-85)AH3 (115-145)TI2 (110-113)AH2 (86-106)EMPTYTI1 (106-109)AH4 (150-160)TIV1 (146-149)AH1 (52-74)Updating...
connected with : NaN
molecule tags Immune system
source organism Streptococcus suis
publication title Molecular mechanism by which surface antigen HP0197 mediates host cell attachment in the pathogenic bacteria Streptococcus suis
pubmed doi rcsb
molecule keywords Uncharacterized protein conserved in bacteria
total genus 65
structure length 154
sequence length 154
ec nomenclature
pdb deposition date 2012-07-06
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.140.130 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A; domain 3 4fz4A00
4FZ4A
chains in the Genus database with same CATH superfamily
3HWCA 4DZYA 2CJ8A 1X90A 3FO3A 2AZEA 4H85A 3VKGA 4U83A 2J7AA 3AFFA 2BTZA 4KSAA 1EGEA 3D9GA 4H81A 1FS7A 1XFUA 1FS9A 1R3BA 4QICA 5GJVE 2E81A 2PNRA 4FZ4A 4G5EA 4JIZA 2R02A 1S26A 2RDZA 3LGQA 4P79A 5M4KA 3Q22A 3VADA 4J1VA 2JBSA 2VF1A 3M9VA 4Q17A 4E02A 4ZYJA 2ZDYA 2REHA 4E01A 2BU5A 2BU6A 2CJ6A 4M9AA 1UDYA 3FCJA 4WJYA 3D9EA 5J71A 2Z1QA 3UU9A 3TTBA 2IX6A 3MKHA 1X8ZA 2D29A 2OR0A 4Q5BA 2BU8A 4RM7A 2BU7A 3Q0AA 4LQSB 1SC5A 1WS9A 3BNGA 4Q0TA 2CJ4A 4KSFA 1EGDA 2LFWA 2CX9A 3AFEA 5BRMA 3TZ5A 2Q8HA 3C2PA 4DOYA 1UKWA 4G97A 2Q8GA 3MPIA 4L3ZA 2E80A 3PFDA 1SIRA 4JEKA 3X0XA 3GM6A 5BRKA 3VKHA 2R0NA 3X0YA 4L3XA 2ZO5A 4IRNA 3F29A 3D6BA 3KMLA 3OWMA 3P4TA 5B6BA 4AKHA 4NXLA 2IX5A 4AKGA 2RFQA 2YYGA 3Q23A 1IS2A 4O5MA 3EONA 1XFVA 3Q24A 3N0RA 4FF1A 3TZ0A 1XFYA 3BNFA 4N5FA 3SWOA 2DDHA 4MP2A 3NF4A 3MPJA 2RF7A 2ZAFA 2ZKJA 2XS1A 2DVLA 4H7QA 1OAHA 4MPEA 4L1FA 5GJWE 3SF6A 5K3IA 3C46A 3TORA 2ZDXA 3GQTA 2JBRA 1GKXA 2E0AA 3D2RA 3OIBA 4V25A 2JBTA 4E00A 2EBAA 3LG1A 4FF3A 1U8VA 4OO2A 3SCEA 3TZ2A 1K90A 2AO2A 1Y0VA 4P13A 4MPCA 4Q4UA 5B5WA 3CRKA 2PG0A 2XS8A 4KTOA 4AI6A 2OEVA 2VIGA 5M4PA 1FS8A 2FP1A 2OT4A 4F0XA 4HKSA 1XFWA 4JIOA 2WBIA 3MDDA 2Q8IA 5M4MA 3GNCA 2GBBA 1RJ4A 1K93A 4X28A 2C12A 4HKRA 4ZXVA 2YYLA 4FF4A 3D9DA 2FONA 3TZ4A 4W9UA 2CJ5A 1LVCA 2R03A 1XFXA 3B96A 5K3JA 3C3LA 4FF2A 1JQIA 4L38A 4KS9A 3EOMA 4IV6A 4LQQB 5B5VA 3RKHA 2QR4A 1T9GA 1Y8PA 1SIQA 1SK6A 2EBHX 1GU6A 1XG2B 2OJQA 2YYJA 3II9A 5K3HA 2YYMA 2YGWA 1QDBA 2CJ7A 4XVXA 3D1IA 3MXLA 4Q5CA 1RP3A 1R2JA 1Y8NA 1JM6A 1PK0A 2UXWA 1X91A 2HJNA 2YYIA 4X28C 3MMOA 1RX0A 3MDEA 3CRLA 3SXQA 4Q1OA 1K8TA 3UBRA 2YYKA 3BNHA 3OWAA 5M4NA 2PO4A 2A1TA 2EC5A 1XFZA 2R0MA 3D9FA 3CE2A 3BNJA 5J6AA 4MPNA 2BU2A 1GJVA 1RJ1A 1PI1A 2FP2A 4V26A 1GKZA 2F6LA 1Y8OA 4L3YA 3R7KA 3S7WA 5K3GA 4AKIA 1W07A 2C0UA 2JIFA 2OEXA 1BUCA 1EGCA 2VR0A 4KCFA 4MP7A 2XQRB 2R05A 3L1TA 1IVHA 2EBFX 2Q8FA 3X29A 4HR3A
chains in the Genus database with same CATH topology
4G97A 2EBHX 1SK6A 2AZEA 4FF3A 3VKGA 1K90A 2YGWA 2AO2A 1Y0VA 1XFUA 4KSAA 3VKHA 3KMLA 4QICA 1RP3A 5GJVE 4AI6A 4FZ4A 4P79A 3Q22A 3Q23A 1S26A 4AKGA 1PK0A 2FP1A 4F0XA 4HKSA 4AKHA 1XFVA 2VF1A 3N0RA 3Q24A 4FF1A 1XFWA 1K8TA 1XFYA 2GBBA 1K93A 2PO4A 2EC5A 1XFZA 4HKRA 3CE2A 1LVCA 3C3LA 1XFXA 4FF2A 2FP2A 2F6LA 4KS9A 4AKIA 3Q0AA 4FF4A 1SC5A 5GJWE 3C46A 2EBFX 2QR4A 2LFWA 4KSFA 3X29A 3C2PA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FZ4 A; 
#chains in the Genus database with same CATH topology
 3HWC A;  4DZY A;  2CJ8 A;  1X90 A;  3FO3 A;  2AZE A;  4H85 A;  3VKG A;  4U83 A;  2J7A A;  3AFF A;  2BTZ A;  4KSA A;  1EGE A;  3D9G A;  4H81 A;  1FS7 A;  1XFU A;  1FS9 A;  1R3B A;  4QIC A;  5GJV E;  2E81 A;  2PNR A;  4FZ4 A;  4G5E A;  4JIZ A;  2R02 A;  1S26 A;  2RDZ A;  3LGQ A;  4P79 A;  5M4K A;  3Q22 A;  3VAD A;  4J1V A;  2JBS A;  2VF1 A;  3M9V A;  4Q17 A;  4E02 A;  4ZYJ A;  2ZDY A;  2REH A;  4E01 A;  2BU5 A;  2BU6 A;  2CJ6 A;  4M9A A;  1UDY A;  3FCJ A;  4WJY A;  3D9E A;  5J71 A;  2Z1Q A;  3UU9 A;  3TTB A;  2IX6 A;  3MKH A;  1X8Z A;  2D29 A;  2OR0 A;  4Q5B A;  2BU8 A;  4RM7 A;  2BU7 A;  3Q0A A;  4LQS B;  1SC5 A;  1WS9 A;  3BNG A;  4Q0T A;  2CJ4 A;  4KSF A;  1EGD A;  2LFW A;  2CX9 A;  3AFE A;  5BRM A;  3TZ5 A;  2Q8H A;  3C2P A;  4DOY A;  1UKW A;  4G97 A;  2Q8G A;  3MPI A;  4L3Z A;  2E80 A;  3PFD A;  1SIR A;  4JEK A;  3X0X A;  3GM6 A;  5BRK A;  3VKH A;  2R0N A;  3X0Y A;  4L3X A;  2ZO5 A;  4IRN A;  3F29 A;  3D6B A;  3KML A;  3OWM A;  3P4T A;  5B6B A;  4AKH A;  4NXL A;  2IX5 A;  4AKG A;  2RFQ A;  2YYG A;  3Q23 A;  1IS2 A;  4O5M A;  3EON A;  1XFV A;  3Q24 A;  3N0R A;  4FF1 A;  3TZ0 A;  1XFY A;  3BNF A;  4N5F A;  3SWO A;  2DDH A;  4MP2 A;  3NF4 A;  3MPJ A;  2RF7 A;  2ZAF A;  2ZKJ A;  2XS1 A;  2DVL A;  4H7Q A;  1OAH A;  4MPE A;  4L1F A;  5GJW E;  3SF6 A;  5K3I A;  3C46 A;  3TOR A;  2ZDX A;  3GQT A;  2JBR A;  1GKX A;  2E0A A;  3D2R A;  3OIB A;  4V25 A;  2JBT A;  4E00 A;  2EBA A;  3LG1 A;  4FF3 A;  1U8V A;  4OO2 A;  3SCE A;  3TZ2 A;  1K90 A;  2AO2 A;  1Y0V A;  4P13 A;  4MPC A;  4Q4U A;  5B5W A;  3CRK A;  2PG0 A;  2XS8 A;  4KTO A;  4AI6 A;  2OEV A;  2VIG A;  5M4P A;  1FS8 A;  2FP1 A;  2OT4 A;  4F0X A;  4HKS A;  1XFW A;  4JIO A;  2WBI A;  3MDD A;  2Q8I A;  5M4M A;  3GNC A;  2GBB A;  1RJ4 A;  1K93 A;  4X28 A;  2C12 A;  4HKR A;  4ZXV A;  2YYL A;  4FF4 A;  3D9D A;  2FON A;  3TZ4 A;  4W9U A;  2CJ5 A;  1LVC A;  2R03 A;  1XFX A;  3B96 A;  5K3J A;  3C3L A;  4FF2 A;  1JQI A;  4L38 A;  4KS9 A;  3EOM A;  4IV6 A;  4LQQ B;  5B5V A;  3RKH A;  2QR4 A;  1T9G A;  1Y8P A;  1SIQ A;  1SK6 A;  2EBH X;  1GU6 A;  1XG2 B;  2OJQ A;  2YYJ A;  3II9 A;  5K3H A;  2YYM A;  2YGW A;  1QDB A;  2CJ7 A;  4XVX A;  3D1I A;  3MXL A;  4Q5C A;  1RP3 A;  1R2J A;  1Y8N A;  1JM6 A;  1PK0 A;  2UXW A;  1X91 A;  2HJN A;  2YYI A;  4X28 C;  3MMO A;  1RX0 A;  3MDE A;  3CRL A;  3SXQ A;  4Q1O A;  1K8T A;  3UBR A;  2YYK A;  3BNH A;  3OWA A;  5M4N A;  2PO4 A;  2A1T A;  2EC5 A;  1XFZ A;  2R0M A;  3D9F A;  3CE2 A;  3BNJ A;  5J6A A;  4MPN A;  2BU2 A;  1GJV A;  1RJ1 A;  1PI1 A;  2FP2 A;  4V26 A;  1GKZ A;  2F6L A;  1Y8O A;  4L3Y A;  3R7K A;  3S7W A;  5K3G A;  4AKI A;  1W07 A;  2C0U A;  2JIF A;  2OEX A;  1BUC A;  1EGC A;  2VR0 A;  4KCF A;  4MP7 A;  2XQR B;  2R05 A;  3L1T A;  1IVH A;  2EBF X;  2Q8F A;  3X29 A;  4HR3 A; 
#chains in the Genus database with same CATH homology
 4G97 A;  2EBH X;  1SK6 A;  2AZE A;  4FF3 A;  3VKG A;  1K90 A;  2YGW A;  2AO2 A;  1Y0V A;  1XFU A;  4KSA A;  3VKH A;  3KML A;  4QIC A;  1RP3 A;  5GJV E;  4AI6 A;  4FZ4 A;  4P79 A;  3Q22 A;  3Q23 A;  1S26 A;  4AKG A;  1PK0 A;  2FP1 A;  4F0X A;  4HKS A;  4AKH A;  1XFV A;  2VF1 A;  3N0R A;  3Q24 A;  4FF1 A;  1XFW A;  1K8T A;  1XFY A;  2GBB A;  1K93 A;  2PO4 A;  2EC5 A;  1XFZ A;  4HKR A;  3CE2 A;  1LVC A;  3C3L A;  1XFX A;  4FF2 A;  2FP2 A;  2F6L A;  4KS9 A;  4AKI A;  3Q0A A;  4FF4 A;  1SC5 A;  5GJW E;  3C46 A;  2EBF X;  2QR4 A;  2LFW A;  4KSF A;  3X29 A;  3C2P A; 
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similar chains in the pdb database (?% sequence similarity)

 
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