1OFZA

Crystal structure of fungal lectin : six-bladed beta-propeller fold and novel fucose recognition mode for aleuria aurantia lectin
Total Genus 67

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
312
structure length
312
Chain Sequence
PTEFLYTSKIAAISWAATGGRQQRVYFQDLNGKIREAQRGGDNPWTGGSSQNVIGEAKLFSPLAAVTWKSAQGIQIRVYCVNKDNILSEFVYDGSKWITGQLGSVGVKVGSNSKLAALQWGGSESAPPNIRVYYQKSNLSGSSIHEYVWSGKWTAGASFGSTAPGTGIGATAIGPGRLRIYYQATDNKIREHCWDSNSWYVGGFSASASAGVSIAAISWGSTPNIRVYWQKGREELYEAAYGGSWNTPGQIKDASRPTPSLPDTFIAANSSGNIDISVFFQASGVSLQQWQWISGKGWSIGAVVPTGTPAGW
5010015020025030030025020015010050
0102030405060Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTIV14 (282-285)TII1 (5-8)TII9 (261-264)S1 (10-15)S6 (64-70)TII2 (17-20)TII'1 (40-43)S23 (267-271)S24 (275-282)S2 (22-28)TI1 (29-32)S3 (33-40)TI2 (49-52)S4 (46-47)S25 (286-293)S5 (53-56)S7 (73-82)TII3 (58-61)TI5 (110-113)TI3 (70-73)TIV2 (92-95)TI4 (82-85)S8 (86-92)3H1 (102-105)S9 (97-99)TIV3 (93-96)S10 (115-120)S11 (129-135)TII4 (139-142)S12 (144-149)TIV4 (149-152)TII5 (163-166)S15 (177-183)TI7 (184-187)S16 (188-194)S18 (206-207)S17 (199-201)S19 (213-219)S20 (224-230)TII8 (231-234)TIV11 (256-259)S21 (236-241)TIV8 (241-244)S22 (249-251)TII10 (293-296)TI6 (123-126)S14 (168-174)TII7 (209-212)TI8 (253-256)S13 (153-159)S26 (297-304)Updating...
connected with : NaN
molecule tags Sugar binding protein
publication title Crystal Structure of Fungal Lectin: Six-Bladed {Beta}-Propeller Fold and Novel Fucose Recognition Mode for Aleuria Aurantia Lectin
pubmed doi rcsb
molecule keywords FUCOSE-SPECIFIC LECTIN
total genus 67
structure length 312
sequence length 312
chains with identical sequence B
ec nomenclature
pdb deposition date 2003-04-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07938 Fungal_lectin Fungal fucose-specific lectin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.120.10.70 Mainly Beta 6 Propeller Neuraminidase Fucose-specific lectin 1ofzA00
4C1YB 4D4UA 5H47A 4CSDA 4UOUA 4AGIA 1OFZA 1IUCA 5EO7A 4AHAA 4D52A 5EO8A 4D52C 4AH4A 1IUBA 4AGTA 4D52B 4C1YA
chains in the Genus database with same CATH superfamily
1MZ6A 4CPYA 4ZY3A 3ZGCA 4CHBA 4D52A 1V3EA 3S8VA 2YDTA 3TIAA 2ZB5A 4YW5A 1MS8A 2BATA 1CQ1A 1EURA 1NN2A 4FPKA 3O9JA 2YDPA 2VSMA 4FOYA 2W8BB 1NSCA 4FP2A 4HZZA 1MS9A 1Z50A 3V65B 4X6KA 4KS3A 4MWQA 2HTVA 4FPHA 3V64C 1N1VA 1IVCA 3B69A 4N1BA 6NN9A 1S1DA 3E5ZA 1V2IA 4B7RA 3LI3A 3ALWA 4GZTA 4M4VA 5EO8A 4D52B 4IMBA 3CL2A 3NO0A 1VCJA 4ASCA 3DR2A 4MWWA 4L7DA 1NCCN 1NNAA 5FWWA 2CMLA 1NNCA 2VK7A 4QN7A 3KGGA 3K3AA 3CL0A 1N7DA 4B7MA 1CVMA 3TI6A 1L7FA 1W8NA 1V3BA 4GJTA 3GVLA 4XHBA 3H6JA 2IARA 4XMIA 4CPLA 3SRGA 2POOA 1S0JA 3HRPA 3ZGDA 1F8DA 1IJQA 2HT7A 3GVKA 5NN9A 2XN4A 4MZAA 4XJ8A 3WWAA 3GVJA 2VW0A 2IATA 3G4HA 4MWUA 2FP9A 4H53A 4FPCA 4B7NA 4K1HA 4A0PA 1NSBA 3O9KA 4M4NA 2QWIA 4MWVA 4QN4A 2W38A 4MC7A 2BERA 5HUMA 1V3DA 3UC1A 3TIBA 4X49A 1Z4YA 4NN9A 2IAVA 3NSSA 3K39A 4CPZA 4JMLA 2QWCA 4FZHA 5HUNA 3JU4A 2H2UA 3H72A 4SLIA 4GDJA 3WW9A 5FNQA 1E8VA 3S94A 4XIKA 2GHSA 4GB1A 3PJQA 2HU4A 3HLHA 2FLUX 3SOQA 4GNCA 1K32A 4FPFA 2B8HA 1X2RA 3T1EA 4YY8A 2HT5A 2QWKA 4M4UA 2ZB6A 4K1IA 5FNUA 2YA7A 1NPEA 1INWA 4HHQA 4YW1A 2VK5A 3SOVA 4MWRA 4UOUA 1IUCA 1OFZA 2X9MA 4GNBA 2IAPA 1NCDN 4X47A 4YW2A 1MS4A 2F10A 3DASA 2HU0A 2VWDA 3TC9A 4GZPA 4AHAA 1Q7FA 2QWDA 3W09A 2FPBA 1IVGA 1SLLA 5HUGA 4HZYA 3P5BL 2ZZKA 2HTYA 4FVKA 3H71A 5GX4A 2AGSA 1MS0A 1IVFA 2JKBA 1USXA 1NMCA 2GVUA 2F13A 4IFLX 4FPEA 2BZDA 4FQ4A 1N1SA 4D52C 2DYHA 3HLIA 1XOGA 4IQKA 2IASA 4J9TA 1SUUA 1B9SA 5GX2A 3KYAA 3TI3A 4K3YA 2XCYA 1N1YA 4XJAA 2DSOA 4NC5A 5F72C 4IFJA 3SLIA 2XZKA 3D11A 1V3CA 3D12A 4WA4A 3H73A 3A9GA 4WEFA 4GZXA 5FNSA 2C4AA 4XJZA 4IFNX 4GZSA 3S2KA 4GZOA 3FW0A 2IAOA 3ADEA 1W1XA 1NCBN 3FVZA 4AGTA 4MWJA 1Z4WA 4IN4A 4XE9A 4YW3A 2QWGA 2HTQA 4NCSA 5GX3A 2F26A 2F0ZA 4WEGA 1W8OA 2VAQA 1N6DA 3Q6PA 1CRZA 4AGIA 1MZ5A 2VK6A 5B2DA 1V0FA 4K1KA 2SIMA 2DG1A 2AEQA 3A72A 4CH9A 1QLGA 5B2CA 4ZLRA 1WCQA 4C1YA 2DG0A 1Z4ZA 2ZW9A 3VNHA 2F11A 3Q6KA 4YZ3A 4FPGA 2F25A 1USRA 1WP5A 4L7BA 1A4QA 2GVXA 4MWXA 4HZWA 3CKZA 3BYCA 2IAUA 1INFA 1N1TA 1Z4XA 1V0EA 3I1CA 4R40A 4GZQA 1CRUA 4C1YB 4HZVA 2HT8A 5CGJA 2AEPA 1NSDA 3TI4A 2IVZA 1INVA 4DGRA 1X2JA 3SREA 4YZ1A 1RWLA 2C4LA 2SILA 2RKCA 3OPZA 1L7GA 4BBWA 4CPOA 2A75A 4GZWA 4XILA 5GTQA 4XJQA 2W5NA 3O4PA 5D9BA 5FZNA 2V91A 4WA3A 4B7JA 3G4EA 1E8TA 4GNAA 5D9CA 4YW4A 2W20A 1IVDA 1IUBA 3Q6TA 2QWAA 2VW1A 4XJ9A 4XYXA 2IAWA 4XOGA 4XJRA 2ISMA 5H47A 4L7CA 3ALXA 4G3NA 2FHRA 2OJHA 2H2NA 1EUTA 1E1AA 4MJUA 4AH4A 1EUUA 4HW6A 2QWJA 4IYGA 3IAXA 4UF7A 4FP3A 3SOBB 4PWZA 2YA6A 3NN9A 4FOVA 4QN3A 4JF7A 1ZI0A 4YZ4A 1SLIA 2FPCA 5FNRA 4MZEA 1F8CA 3K36A 4I00A 1F8BA 2ZWAA 1BJIA 2YA5A 3B7EA 4YZ2A 5D9DA 5GX1A 4K1JA 2Z32A 1U6DX 4X4AA 1DILA 4FPJA 1KITA 2AH2A 3WN7A 4XIOA 3S8ZA 3LI5A 4KS4A 4QN5A 4WA5A 4QN6A 3LI4A 1INHA 4HHOA 1DIMA 4GDIA 1EUSA 4XMBA 2WOZA 1WCSA 3INBA 1VCUA 2F12A 2QE8A 1A14N 2P4OA 3SILA 4ZGCA 3AMSA 4FPYA 2VVZA 1IVEA 3L6VA 7NN9A 1PJXA 4MJVA 1ZGKA 2VPJA 1B9VA 1QBIA 5HX0A 3U0SA 4FOQA 4HIZA 2QWEA 5FNTA 2HTRA 5GX5A 4FPLA 4MWYA 1XOEA 1L7HA 1V0ZA 3V1SA 2F29A 4M3MA 1W0PA 1W20A 4DG6A 4GEZA 4Q1UA 2BF6A 4D8SA 5EO7A 5M1ZA 3II7A 4QNPA 5JYYA 5F9TA 1INYA 3A9HA 5FZJA 2W5OA 2F28A 2VW2A 4H52A 1NNBA 3SALA 4FOWA 1N6EA 1N6FA 3WDZA 1H6LA 2QWBA 3SANA 4KS5A 4GN9A 1S0IA 4O5TA 1MS1A 3AMRA 4D4UA 2SLIA 1S18A 4CPNA 3K37A 2G8SA 2HTUA 3TICA 4MWLA 2IAXA 4FJ6A 1W21A 1POOA 1INXA 1MS3A 3A71A 1INGA 2IAQA 4KS1A 1Z4VA 2VSKA 2YA4A 3BEQA 5HUKA 2F27A 3TI8A 2F24A 4O5SA 1MS5A 3VNGA 3TI5A 1W0OA 4FPOB 1C9UA 1F8EA 2YA8A 2XZJA 1NMBN 1RWIA 4XMAA 4XHXA 4KS2A 3K38A 4GN8A 2GVWA 1NCAN 1MR5A 1V04A 4GN7A 2HTWA 2XZIA 1SO7A 1E8UA 2FP8A 4B7QA 2GVVA 1MWEA 2QWFA 4CSDA 1B9TA 4HZXA 4Q6KA 5EX7A 4XJWA 2W8BA 1SNTA 2HQSA 2QWHA 1A4GA 3CYEA 4XJUA 4YZ5A 1IVBA 4CPMA 1C5KA 1NMAN 4MX0A
chains in the Genus database with same CATH topology
4C1YB 4D4UA 5H47A 4CSDA 4UOUA 4AGIA 1OFZA 1IUCA 5EO7A 4AHAA 4D52A 5EO8A 4D52C 4AH4A 1IUBA 4AGTA 4D52B 4C1YA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4C1Y B;  4D4U A;  5H47 A;  4CSD A;  4UOU A;  4AGI A;  1OFZ A;  1IUC A;  5EO7 A;  4AHA A;  4D52 A;  5EO8 A;  4D52 C;  4AH4 A;  1IUB A;  4AGT A;  4D52 B;  4C1Y A; 
#chains in the Genus database with same CATH topology
 1MZ6 A;  4CPY A;  4ZY3 A;  3ZGC A;  4CHB A;  4D52 A;  1V3E A;  3S8V A;  2YDT A;  3TIA A;  2ZB5 A;  4YW5 A;  1MS8 A;  2BAT A;  1CQ1 A;  1EUR A;  1NN2 A;  4FPK A;  3O9J A;  2YDP A;  2VSM A;  4FOY A;  2W8B B;  1NSC A;  4FP2 A;  4HZZ A;  1MS9 A;  1Z50 A;  3V65 B;  4X6K A;  4KS3 A;  4MWQ A;  2HTV A;  4FPH A;  3V64 C;  1N1V A;  1IVC A;  3B69 A;  4N1B A;  6NN9 A;  1S1D A;  3E5Z A;  1V2I A;  4B7R A;  3LI3 A;  3ALW A;  4GZT A;  4M4V A;  5EO8 A;  4D52 B;  4IMB A;  3CL2 A;  3NO0 A;  1VCJ A;  4ASC A;  3DR2 A;  4MWW A;  4L7D A;  1NCC N;  1NNA A;  5FWW A;  2CML A;  1NNC A;  2VK7 A;  4QN7 A;  3KGG A;  3K3A A;  3CL0 A;  1N7D A;  4B7M A;  1CVM A;  3TI6 A;  1L7F A;  1W8N A;  1V3B A;  4GJT A;  3GVL A;  4XHB A;  3H6J A;  2IAR A;  4XMI A;  4CPL A;  3SRG A;  2POO A;  1S0J A;  3HRP A;  3ZGD A;  1F8D A;  1IJQ A;  2HT7 A;  3GVK A;  5NN9 A;  2XN4 A;  4MZA A;  4XJ8 A;  3WWA A;  3GVJ A;  2VW0 A;  2IAT A;  3G4H A;  4MWU A;  2FP9 A;  4H53 A;  4FPC A;  4B7N A;  4K1H A;  4A0P A;  1NSB A;  3O9K A;  4M4N A;  2QWI A;  4MWV A;  4QN4 A;  2W38 A;  4MC7 A;  2BER A;  5HUM A;  1V3D A;  3UC1 A;  3TIB A;  4X49 A;  1Z4Y A;  4NN9 A;  2IAV A;  3NSS A;  3K39 A;  4CPZ A;  4JML A;  2QWC A;  4FZH A;  5HUN A;  3JU4 A;  2H2U A;  3H72 A;  4SLI A;  4GDJ A;  3WW9 A;  5FNQ A;  1E8V A;  3S94 A;  4XIK A;  2GHS A;  4GB1 A;  3PJQ A;  2HU4 A;  3HLH A;  2FLU X;  3SOQ A;  4GNC A;  1K32 A;  4FPF A;  2B8H A;  1X2R A;  3T1E A;  4YY8 A;  2HT5 A;  2QWK A;  4M4U A;  2ZB6 A;  4K1I A;  5FNU A;  2YA7 A;  1NPE A;  1INW A;  4HHQ A;  4YW1 A;  2VK5 A;  3SOV A;  4MWR A;  4UOU A;  1IUC A;  1OFZ A;  2X9M A;  4GNB A;  2IAP A;  1NCD N;  4X47 A;  4YW2 A;  1MS4 A;  2F10 A;  3DAS A;  2HU0 A;  2VWD A;  3TC9 A;  4GZP A;  4AHA A;  1Q7F A;  2QWD A;  3W09 A;  2FPB A;  1IVG A;  1SLL A;  5HUG A;  4HZY A;  3P5B L;  2ZZK A;  2HTY A;  4FVK A;  3H71 A;  5GX4 A;  2AGS A;  1MS0 A;  1IVF A;  2JKB A;  1USX A;  1NMC A;  2GVU A;  2F13 A;  4IFL X;  4FPE A;  2BZD A;  4FQ4 A;  1N1S A;  4D52 C;  2DYH A;  3HLI A;  1XOG A;  4IQK A;  2IAS A;  4J9T A;  1SUU A;  1B9S A;  5GX2 A;  3KYA A;  3TI3 A;  4K3Y A;  2XCY A;  1N1Y A;  4XJA A;  2DSO A;  4NC5 A;  5F72 C;  4IFJ A;  3SLI A;  2XZK A;  3D11 A;  1V3C A;  3D12 A;  4WA4 A;  3H73 A;  3A9G A;  4WEF A;  4GZX A;  5FNS A;  2C4A A;  4XJZ A;  4IFN X;  4GZS A;  3S2K A;  4GZO A;  3FW0 A;  2IAO A;  3ADE A;  1W1X A;  1NCB N;  3FVZ A;  4AGT A;  4MWJ A;  1Z4W A;  4IN4 A;  4XE9 A;  4YW3 A;  2QWG A;  2HTQ A;  4NCS A;  5GX3 A;  2F26 A;  2F0Z A;  4WEG A;  1W8O A;  2VAQ A;  1N6D A;  3Q6P A;  1CRZ A;  4AGI A;  1MZ5 A;  2VK6 A;  5B2D A;  1V0F A;  4K1K A;  2SIM A;  2DG1 A;  2AEQ A;  3A72 A;  4CH9 A;  1QLG A;  5B2C A;  4ZLR A;  1WCQ A;  4C1Y A;  2DG0 A;  1Z4Z A;  2ZW9 A;  3VNH A;  2F11 A;  3Q6K A;  4YZ3 A;  4FPG A;  2F25 A;  1USR A;  1WP5 A;  4L7B A;  1A4Q A;  2GVX A;  4MWX A;  4HZW A;  3CKZ A;  3BYC A;  2IAU A;  1INF A;  1N1T A;  1Z4X A;  1V0E A;  3I1C A;  4R40 A;  4GZQ A;  1CRU A;  4C1Y B;  4HZV A;  2HT8 A;  5CGJ A;  2AEP A;  1NSD A;  3TI4 A;  2IVZ A;  1INV A;  4DGR A;  1X2J A;  3SRE A;  4YZ1 A;  1RWL A;  2C4L A;  2SIL A;  2RKC A;  3OPZ A;  1L7G A;  4BBW A;  4CPO A;  2A75 A;  4GZW A;  4XIL A;  5GTQ A;  4XJQ A;  2W5N A;  3O4P A;  5D9B A;  5FZN A;  2V91 A;  4WA3 A;  4B7J A;  3G4E A;  1E8T A;  4GNA A;  5D9C A;  4YW4 A;  2W20 A;  1IVD A;  1IUB A;  3Q6T A;  2QWA A;  2VW1 A;  4XJ9 A;  4XYX A;  2IAW A;  4XOG A;  4XJR A;  2ISM A;  5H47 A;  4L7C A;  3ALX A;  4G3N A;  2FHR A;  2OJH A;  2H2N A;  1EUT A;  1E1A A;  4MJU A;  4AH4 A;  1EUU A;  4HW6 A;  2QWJ A;  4IYG A;  3IAX A;  4UF7 A;  4FP3 A;  3SOB B;  4PWZ A;  2YA6 A;  3NN9 A;  4FOV A;  4QN3 A;  4JF7 A;  1ZI0 A;  4YZ4 A;  1SLI A;  2FPC A;  5FNR A;  4MZE A;  1F8C A;  3K36 A;  4I00 A;  1F8B A;  2ZWA A;  1BJI A;  2YA5 A;  3B7E A;  4YZ2 A;  5D9D A;  5GX1 A;  4K1J A;  2Z32 A;  1U6D X;  4X4A A;  1DIL A;  4FPJ A;  1KIT A;  2AH2 A;  3WN7 A;  4XIO A;  3S8Z A;  3LI5 A;  4KS4 A;  4QN5 A;  4WA5 A;  4QN6 A;  3LI4 A;  1INH A;  4HHO A;  1DIM A;  4GDI A;  1EUS A;  4XMB A;  2WOZ A;  1WCS A;  3INB A;  1VCU A;  2F12 A;  2QE8 A;  1A14 N;  2P4O A;  3SIL A;  4ZGC A;  3AMS A;  4FPY A;  2VVZ A;  1IVE A;  3L6V A;  7NN9 A;  1PJX A;  4MJV A;  1ZGK A;  2VPJ A;  1B9V A;  1QBI A;  5HX0 A;  3U0S A;  4FOQ A;  4HIZ A;  2QWE A;  5FNT A;  2HTR A;  5GX5 A;  4FPL A;  4MWY A;  1XOE A;  1L7H A;  1V0Z A;  3V1S A;  2F29 A;  4M3M A;  1W0P A;  1W20 A;  4DG6 A;  4GEZ A;  4Q1U A;  2BF6 A;  4D8S A;  5EO7 A;  5M1Z A;  3II7 A;  4QNP A;  5JYY A;  5F9T A;  1INY A;  3A9H A;  5FZJ A;  2W5O A;  2F28 A;  2VW2 A;  4H52 A;  1NNB A;  3SAL A;  4FOW A;  1N6E A;  1N6F A;  3WDZ A;  1H6L A;  2QWB A;  3SAN A;  4KS5 A;  4GN9 A;  1S0I A;  4O5T A;  1MS1 A;  3AMR A;  4D4U A;  2SLI A;  1S18 A;  4CPN A;  3K37 A;  2G8S A;  2HTU A;  3TIC A;  4MWL A;  2IAX A;  4FJ6 A;  1W21 A;  1POO A;  1INX A;  1MS3 A;  3A71 A;  1ING A;  2IAQ A;  4KS1 A;  1Z4V A;  2VSK A;  2YA4 A;  3BEQ A;  5HUK A;  2F27 A;  3TI8 A;  2F24 A;  4O5S A;  1MS5 A;  3VNG A;  3TI5 A;  1W0O A;  4FPO B;  1C9U A;  1F8E A;  2YA8 A;  2XZJ A;  1NMB N;  1RWI A;  4XMA A;  4XHX A;  4KS2 A;  3K38 A;  4GN8 A;  2GVW A;  1NCA N;  1MR5 A;  1V04 A;  4GN7 A;  2HTW A;  2XZI A;  1SO7 A;  1E8U A;  2FP8 A;  4B7Q A;  2GVV A;  1MWE A;  2QWF A;  4CSD A;  1B9T A;  4HZX A;  4Q6K A;  5EX7 A;  4XJW A;  2W8B A;  1SNT A;  2HQS A;  2QWH A;  1A4G A;  3CYE A;  4XJU A;  4YZ5 A;  1IVB A;  4CPM A;  1C5K A;  1NMA N;  4MX0 A; 
#chains in the Genus database with same CATH homology
 4C1Y B;  4D4U A;  5H47 A;  4CSD A;  4UOU A;  4AGI A;  1OFZ A;  1IUC A;  5EO7 A;  4AHA A;  4D52 A;  5EO8 A;  4D52 C;  4AH4 A;  1IUB A;  4AGT A;  4D52 B;  4C1Y A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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