5EO8A

Crystal structure of aol(868)
Total Genus 73
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
73
sequence length
311
structure length
311
Chain Sequence
MSTPGAQEVLFRTGIAAVNSTNHLRVYFQDSHGSIRESLYESGWANGTAKNVIAKAKLGTPLAATSKELKNIRVYSLTEDNVLQEAAYDSGSGWYNGALAGAKFTVAPYSRIGSVFLAGTNALQLRIYAQKTDNTIQEYMWNGDGWKEGTNLGVALPGTGIGVTCWRYTDYDGPSIRVWFQTDNLKLVQRAYDPHTGWYKELTTIFDKAPPRCAIAATNFNPGKSSIYMRIYFVNSDNTIWQVCWDHGQGYHDKRTITPVIQGSEIAIISWEGPELRLYFQNGTYVSAISEWTWGKAHGSQLGRRALPPAE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Sugar binding protein
molecule keywords Predicted protein
publication title Six independent fucose-binding sites in the crystal structure of Aspergillus oryzae lectin
pubmed doi rcsb
source organism Aspergillus oryzae rib40
total genus 73
structure length 311
sequence length 311
ec nomenclature
pdb deposition date 2015-11-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07938 Fungal_lectin Fungal fucose-specific lectin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.120.10.70 Mainly Beta 6 Propeller Neuraminidase Fucose-specific lectin 5eo8A00
4AH4A 1IUBA 4AHAA 1OFZA 4C1YA 4D52A 4D52C 5EO8A 5H47A 4UOUA 4AGIA 4C1YB 4D52B 1IUCA 4CSDA 5EO7A 4AGTA 4D4UA
chains in the Genus database with same CATH superfamily
4H52A 3A9GA 4QN7A 3V65B 5FNTA 4HZYA 3AMRA 4XIOA 2XZJA 4KS2A 5F9TA 5GX4A 2W8BA 4IFNX 5EO7A 4CPYA 1F8EA 1X2JA 2H2NA 2QE8A 4HW6A 2IAWA 1EUSA 4FPYA 2IATA 4GZTA 2HU4A 4MWUA 2IAPA 2B8HA 4MWLA 1INFA 4KS1A 1C5KA 1B9VA 2QWBA 4CPLA 1NCBN 1E8UA 2IARA 2XZKA 1SLLA 4IQKA 4D52B 4FVKA 1CRUA 4XJQA 4XMIA 1N6FA 1F8DA 2VWDA 4XJ8A 3B69A 2DSOA 4FPLA 4IMBA 1V3CA 2SLIA 1N1SA 5NN9A 2GVVA 4M3MA 3Q6PA 3HLHA 1NSDA 1V3BA 3S8ZA 1ZI0A 4GDIA 4N1BA 3O9JA 3S8VA 3G4HA 3VNHA 3A9HA 4WA4A 5H47A 1H6LA 1NCAN 1WCSA 1W21A 1XOGA 4MJUA 4X6KA 3ZGCA 1NNAA 2AEPA 4M4NA 1MS8A 3TIBA 4NN9A 3SRGA 2VK7A 3DASA 4XMAA 1IVCA 3NO0A 2HT5A 1A4GA 1V04A 1W20A 1S0IA 1WCQA 3LI4A 4L7DA 1RWLA 2CMLA 4G3NA 2W8BB 4Q1UA 1XOEA 3K38A 4GEZA 2HTUA 2F13A 3TI4A 3BEQA 3A71A 4XE9A 3O4PA 1MS3A 3A72A 4FOQA 4CHBA 2IAQA 4FZHA 1IJQA 4ZY3A 1MWEA 2H2UA 4XJAA 2QWKA 2F10A 2HTQA 3H73A 3E5ZA 3H72A 4XJWA 5D9CA 1Z4ZA 2ZB5A 4H53A 2AH2A 1Z4XA 1INWA 2HTVA 4XIKA 1NSBA 3INBA 1NSCA 1C9UA 2W5NA 5GX1A 4HZVA 4C1YA 3T1EA 3CL2A 2GHSA 3Q6KA 4HZWA 3K3AA 4GZXA 3SOBB 1VCUA 5EO8A 4AGIA 3TC9A 4MZAA 2F12A 4IFJA 2ZWAA 4MWRA 4O5SA 4AH4A 4GNAA 4B7MA 4J9TA 1INHA 1S18A 1X2RA 2HU0A 1KITA 3FW0A 5FNUA 3SREA 2FHRA 1VCJA 2ZZKA 4K1JA 4L7BA 4KS4A 4IFLX 1SUUA 2C4LA 3CKZA 2VW1A 4GDJA 1USRA 4GZQA 1QLGA 3GVKA 4MJVA 4MWVA 1E8TA 5GX3A 3W09A 1EUUA 2QWDA 2ZW9A 3NN9A 2GVUA 2YA7A 4D8SA 2SIMA 1MZ6A 4IYGA 4QN6A 4HZXA 3P5BL 4ZLRA 3FVZA 4D4UA 4MWQA 3V1SA 2QWCA 1NPEA 4R40A 2VK6A 2VAQA 1CVMA 4QNPA 4MX0A 3TI6A 5HUMA 2QWHA 1CQ1A 2RKCA 2Z32A 4KS3A 1INYA 4YW5A 1IVFA 2VK5A 1EURA 1IVBA 4YZ3A 5GX5A 2YDTA 4FPCA 4GZOA 1MS1A 4C1YB 1N1TA 3DR2A 4FQ4A 2YDPA 2YA6A 4MC7A 1BJIA 3S2KA 4XMBA 3CL0A 5F72C 5EX7A 1NCDN 4XJRA 3H6JA 3SLIA 1N1YA 2GVXA 1MZ5A 1WP5A 4FPKA 2BF6A 3WN7A 2VSMA 1POOA 3LI3A 2F29A 4PWZA 3TI5A 1Z50A 1V2IA 2ZB6A 4X47A 1Z4VA 3O9KA 2DG0A 3HLIA 2IASA 3K37A 1RWIA 4HHQA 4YY8A 4YW4A 4MWWA 3ADEA 1W0PA 2AEQA 1IUBA 3KYAA 2OJHA 3NSSA 2JKBA 4YW3A 6NN9A 1V0ZA 2VW2A 2IAXA 1F8BA 3GVLA 4XJZA 2W5OA 2F27A 4X4AA 2F24A 4WA3A 1F8CA 2IAUA 4GNCA 1CRZA 3SALA 4CPMA 2HT8A 1IUCA 2YA4A 3HRPA 1NN2A 1V3EA 1OFZA 1N6EA 1V3DA 1SLIA 4FPFA 3ALWA 4JMLA 1W1XA 4M4UA 1MS9A 2VW0A 4HIZA 4HHOA 5FZJA 1EUTA 2BATA 3H71A 5D9BA 1IVDA 4AGTA 4DGRA 3SOQA 4YZ1A 3G4EA 4XJ9A 4XYXA 3WWAA 5HUKA 4B7QA 4GZSA 2HQSA 4GB1A 3V64C 1MR5A 3U0SA 2ISMA 4GN8A 1B9TA 4GJTA 2W20A 1S1DA 1K32A 2GVWA 2FP9A 4DG6A 4WA5A 1INGA 2C4AA 2WOZA 4YW2A 5JYYA 2HT7A 5HUGA 1IVEA 4FOVA 4D52C 2P4OA 1W8OA 2F25A 4BBWA 2A75A 5B2DA 1L7FA 2XCYA 2QWAA 3JU4A 2HTYA 5B2CA 4CSDA 5FNSA 4MWJA 3B7EA 2V91A 2FP8A 1A14N 2QWGA 3CYEA 2YA5A 1SNTA 3PJQA 1L7HA 1V0FA 4FOWA 1IVGA 4GZPA 4M4VA 2POOA 3II7A 2XZIA 4YZ5A 1INXA 3OPZA 1Z4WA 3SILA 3TIAA 4AHAA 1MS5A 4MWYA 4MZEA 4B7RA 4L7CA 4FP2A 1Z4YA 2YA8A 3GVJA 4XHXA 2QWIA 1PJXA 2AGSA 4CPNA 1A4QA 2X9MA 2IVZA 2F26A 4K1KA 3WDZA 1NNBA 3I1CA 5FNQA 4GZWA 4JF7A 4FPGA 4FPEA 4KS5A 4HZZA 4O5TA 4GN9A 4FOYA 3SOVA 2F28A 3SANA 4CH9A 2W38A 1SO7A 1U6DX 4ASCA 4GN7A 4K3YA 1N6DA 3KGGA 2F0ZA 3TI8A 1ZGKA 3UC1A 5M1ZA 2HTWA 4FPJA 5GTQA 3AMSA 4NC5A 1E1AA 2DYHA 4FJ6A 1INVA 4QN5A 4A0PA 1MS0A 4YZ4A 1QBIA 2XN4A 2FLUX 4FP3A 4K1IA 3BYCA 3K39A 4XILA 3TICA 4MWXA 4UF7A 2VSKA 3D12A 7NN9A 1W0OA 4CPOA 2QWEA 2FPCA 4B7NA 2IAVA 1DIMA 4FPOB 4GNBA 4XJUA 2F11A 2VPJA 3Q6TA 5FWWA 4QN3A 4CPZA 1NMCA 2FPBA 4K1HA 2HTRA 1DILA 5D9DA 3S94A 3K36A 2QWFA 3ALXA 4WEFA 1E8VA 2SILA 2VVZA 5HUNA 5HX0A 4D52A 1S0JA 4FPHA 1W8NA 3WW9A 2BZDA 4IN4A 4NCSA 1B9SA 2G8SA 2QWJA 4XHBA 1NCCN 1Q7FA 4YW1A 3VNGA 1L7GA 4YZ2A 3IAXA 5FNRA 1NMBN 1NNCA 4X49A 4ZGCA 3D11A 1MS4A 2BERA 1N1VA 5GX2A 5FZNA 4QN4A 3LI5A 3L6VA 3TI3A 2DG1A 4B7JA 4WEGA 1V0EA 1USXA 1N7DA 3ZGDA 4UOUA 4Q6KA 2IAOA 4XOGA 4I00A 5CGJA 1NMAN 4SLIA
chains in the Genus database with same CATH topology
4AH4A 1IUBA 4AHAA 1OFZA 4C1YA 4D52A 4D52C 5EO8A 5H47A 4UOUA 4AGIA 4C1YB 4D52B 1IUCA 4CSDA 5EO7A 4AGTA 4D4UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4AH4 A;  1IUB A;  4AHA A;  1OFZ A;  4C1Y A;  4D52 A;  4D52 C;  5EO8 A;  5H47 A;  4UOU A;  4AGI A;  4C1Y B;  4D52 B;  1IUC A;  4CSD A;  5EO7 A;  4AGT A;  4D4U A; 
#chains in the Genus database with same CATH topology
 4H52 A;  3A9G A;  4QN7 A;  3V65 B;  5FNT A;  4HZY A;  3AMR A;  4XIO A;  2XZJ A;  4KS2 A;  5F9T A;  5GX4 A;  2W8B A;  4IFN X;  5EO7 A;  4CPY A;  1F8E A;  1X2J A;  2H2N A;  2QE8 A;  4HW6 A;  2IAW A;  1EUS A;  4FPY A;  2IAT A;  4GZT A;  2HU4 A;  4MWU A;  2IAP A;  2B8H A;  4MWL A;  1INF A;  4KS1 A;  1C5K A;  1B9V A;  2QWB A;  4CPL A;  1NCB N;  1E8U A;  2IAR A;  2XZK A;  1SLL A;  4IQK A;  4D52 B;  4FVK A;  1CRU A;  4XJQ A;  4XMI A;  1N6F A;  1F8D A;  2VWD A;  4XJ8 A;  3B69 A;  2DSO A;  4FPL A;  4IMB A;  1V3C A;  2SLI A;  1N1S A;  5NN9 A;  2GVV A;  4M3M A;  3Q6P A;  3HLH A;  1NSD A;  1V3B A;  3S8Z A;  1ZI0 A;  4GDI A;  4N1B A;  3O9J A;  3S8V A;  3G4H A;  3VNH A;  3A9H A;  4WA4 A;  5H47 A;  1H6L A;  1NCA N;  1WCS A;  1W21 A;  1XOG A;  4MJU A;  4X6K A;  3ZGC A;  1NNA A;  2AEP A;  4M4N A;  1MS8 A;  3TIB A;  4NN9 A;  3SRG A;  2VK7 A;  3DAS A;  4XMA A;  1IVC A;  3NO0 A;  2HT5 A;  1A4G A;  1V04 A;  1W20 A;  1S0I A;  1WCQ A;  3LI4 A;  4L7D A;  1RWL A;  2CML A;  4G3N A;  2W8B B;  4Q1U A;  1XOE A;  3K38 A;  4GEZ A;  2HTU A;  2F13 A;  3TI4 A;  3BEQ A;  3A71 A;  4XE9 A;  3O4P A;  1MS3 A;  3A72 A;  4FOQ A;  4CHB A;  2IAQ A;  4FZH A;  1IJQ A;  4ZY3 A;  1MWE A;  2H2U A;  4XJA A;  2QWK A;  2F10 A;  2HTQ A;  3H73 A;  3E5Z A;  3H72 A;  4XJW A;  5D9C A;  1Z4Z A;  2ZB5 A;  4H53 A;  2AH2 A;  1Z4X A;  1INW A;  2HTV A;  4XIK A;  1NSB A;  3INB A;  1NSC A;  1C9U A;  2W5N A;  5GX1 A;  4HZV A;  4C1Y A;  3T1E A;  3CL2 A;  2GHS A;  3Q6K A;  4HZW A;  3K3A A;  4GZX A;  3SOB B;  1VCU A;  5EO8 A;  4AGI A;  3TC9 A;  4MZA A;  2F12 A;  4IFJ A;  2ZWA A;  4MWR A;  4O5S A;  4AH4 A;  4GNA A;  4B7M A;  4J9T A;  1INH A;  1S18 A;  1X2R A;  2HU0 A;  1KIT A;  3FW0 A;  5FNU A;  3SRE A;  2FHR A;  1VCJ A;  2ZZK A;  4K1J A;  4L7B A;  4KS4 A;  4IFL X;  1SUU A;  2C4L A;  3CKZ A;  2VW1 A;  4GDJ A;  1USR A;  4GZQ A;  1QLG A;  3GVK A;  4MJV A;  4MWV A;  1E8T A;  5GX3 A;  3W09 A;  1EUU A;  2QWD A;  2ZW9 A;  3NN9 A;  2GVU A;  2YA7 A;  4D8S A;  2SIM A;  1MZ6 A;  4IYG A;  4QN6 A;  4HZX A;  3P5B L;  4ZLR A;  3FVZ A;  4D4U A;  4MWQ A;  3V1S A;  2QWC A;  1NPE A;  4R40 A;  2VK6 A;  2VAQ A;  1CVM A;  4QNP A;  4MX0 A;  3TI6 A;  5HUM A;  2QWH A;  1CQ1 A;  2RKC A;  2Z32 A;  4KS3 A;  1INY A;  4YW5 A;  1IVF A;  2VK5 A;  1EUR A;  1IVB A;  4YZ3 A;  5GX5 A;  2YDT A;  4FPC A;  4GZO A;  1MS1 A;  4C1Y B;  1N1T A;  3DR2 A;  4FQ4 A;  2YDP A;  2YA6 A;  4MC7 A;  1BJI A;  3S2K A;  4XMB A;  3CL0 A;  5F72 C;  5EX7 A;  1NCD N;  4XJR A;  3H6J A;  3SLI A;  1N1Y A;  2GVX A;  1MZ5 A;  1WP5 A;  4FPK A;  2BF6 A;  3WN7 A;  2VSM A;  1POO A;  3LI3 A;  2F29 A;  4PWZ A;  3TI5 A;  1Z50 A;  1V2I A;  2ZB6 A;  4X47 A;  1Z4V A;  3O9K A;  2DG0 A;  3HLI A;  2IAS A;  3K37 A;  1RWI A;  4HHQ A;  4YY8 A;  4YW4 A;  4MWW A;  3ADE A;  1W0P A;  2AEQ A;  1IUB A;  3KYA A;  2OJH A;  3NSS A;  2JKB A;  4YW3 A;  6NN9 A;  1V0Z A;  2VW2 A;  2IAX A;  1F8B A;  3GVL A;  4XJZ A;  2W5O A;  2F27 A;  4X4A A;  2F24 A;  4WA3 A;  1F8C A;  2IAU A;  4GNC A;  1CRZ A;  3SAL A;  4CPM A;  2HT8 A;  1IUC A;  2YA4 A;  3HRP A;  1NN2 A;  1V3E A;  1OFZ A;  1N6E A;  1V3D A;  1SLI A;  4FPF A;  3ALW A;  4JML A;  1W1X A;  4M4U A;  1MS9 A;  2VW0 A;  4HIZ A;  4HHO A;  5FZJ A;  1EUT A;  2BAT A;  3H71 A;  5D9B A;  1IVD A;  4AGT A;  4DGR A;  3SOQ A;  4YZ1 A;  3G4E A;  4XJ9 A;  4XYX A;  3WWA A;  5HUK A;  4B7Q A;  4GZS A;  2HQS A;  4GB1 A;  3V64 C;  1MR5 A;  3U0S A;  2ISM A;  4GN8 A;  1B9T A;  4GJT A;  2W20 A;  1S1D A;  1K32 A;  2GVW A;  2FP9 A;  4DG6 A;  4WA5 A;  1ING A;  2C4A A;  2WOZ A;  4YW2 A;  5JYY A;  2HT7 A;  5HUG A;  1IVE A;  4FOV A;  4D52 C;  2P4O A;  1W8O A;  2F25 A;  4BBW A;  2A75 A;  5B2D A;  1L7F A;  2XCY A;  2QWA A;  3JU4 A;  2HTY A;  5B2C A;  4CSD A;  5FNS A;  4MWJ A;  3B7E A;  2V91 A;  2FP8 A;  1A14 N;  2QWG A;  3CYE A;  2YA5 A;  1SNT A;  3PJQ A;  1L7H A;  1V0F A;  4FOW A;  1IVG A;  4GZP A;  4M4V A;  2POO A;  3II7 A;  2XZI A;  4YZ5 A;  1INX A;  3OPZ A;  1Z4W A;  3SIL A;  3TIA A;  4AHA A;  1MS5 A;  4MWY A;  4MZE A;  4B7R A;  4L7C A;  4FP2 A;  1Z4Y A;  2YA8 A;  3GVJ A;  4XHX A;  2QWI A;  1PJX A;  2AGS A;  4CPN A;  1A4Q A;  2X9M A;  2IVZ A;  2F26 A;  4K1K A;  3WDZ A;  1NNB A;  3I1C A;  5FNQ A;  4GZW A;  4JF7 A;  4FPG A;  4FPE A;  4KS5 A;  4HZZ A;  4O5T A;  4GN9 A;  4FOY A;  3SOV A;  2F28 A;  3SAN A;  4CH9 A;  2W38 A;  1SO7 A;  1U6D X;  4ASC A;  4GN7 A;  4K3Y A;  1N6D A;  3KGG A;  2F0Z A;  3TI8 A;  1ZGK A;  3UC1 A;  5M1Z A;  2HTW A;  4FPJ A;  5GTQ A;  3AMS A;  4NC5 A;  1E1A A;  2DYH A;  4FJ6 A;  1INV A;  4QN5 A;  4A0P A;  1MS0 A;  4YZ4 A;  1QBI A;  2XN4 A;  2FLU X;  4FP3 A;  4K1I A;  3BYC A;  3K39 A;  4XIL A;  3TIC A;  4MWX A;  4UF7 A;  2VSK A;  3D12 A;  7NN9 A;  1W0O A;  4CPO A;  2QWE A;  2FPC A;  4B7N A;  2IAV A;  1DIM A;  4FPO B;  4GNB A;  4XJU A;  2F11 A;  2VPJ A;  3Q6T A;  5FWW A;  4QN3 A;  4CPZ A;  1NMC A;  2FPB A;  4K1H A;  2HTR A;  1DIL A;  5D9D A;  3S94 A;  3K36 A;  2QWF A;  3ALX A;  4WEF A;  1E8V A;  2SIL A;  2VVZ A;  5HUN A;  5HX0 A;  4D52 A;  1S0J A;  4FPH A;  1W8N A;  3WW9 A;  2BZD A;  4IN4 A;  4NCS A;  1B9S A;  2G8S A;  2QWJ A;  4XHB A;  1NCC N;  1Q7F A;  4YW1 A;  3VNG A;  1L7G A;  4YZ2 A;  3IAX A;  5FNR A;  1NMB N;  1NNC A;  4X49 A;  4ZGC A;  3D11 A;  1MS4 A;  2BER A;  1N1V A;  5GX2 A;  5FZN A;  4QN4 A;  3LI5 A;  3L6V A;  3TI3 A;  2DG1 A;  4B7J A;  4WEG A;  1V0E A;  1USX A;  1N7D A;  3ZGD A;  4UOU A;  4Q6K A;  2IAO A;  4XOG A;  4I00 A;  5CGJ A;  1NMA N;  4SLI A; 
#chains in the Genus database with same CATH homology
 4AH4 A;  1IUB A;  4AHA A;  1OFZ A;  4C1Y A;  4D52 A;  4D52 C;  5EO8 A;  5H47 A;  4UOU A;  4AGI A;  4C1Y B;  4D52 B;  1IUC A;  4CSD A;  5EO7 A;  4AGT A;  4D4U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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