5EO8A

Crystal structure of aol(868)
Total Genus 73
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
73
sequence length
311
structure length
311
Chain Sequence
MSTPGAQEVLFRTGIAAVNSTNHLRVYFQDSHGSIRESLYESGWANGTAKNVIAKAKLGTPLAATSKELKNIRVYSLTEDNVLQEAAYDSGSGWYNGALAGAKFTVAPYSRIGSVFLAGTNALQLRIYAQKTDNTIQEYMWNGDGWKEGTNLGVALPGTGIGVTCWRYTDYDGPSIRVWFQTDNLKLVQRAYDPHTGWYKELTTIFDKAPPRCAIAATNFNPGKSSIYMRIYFVNSDNTIWQVCWDHGQGYHDKRTITPVIQGSEIAIISWEGPELRLYFQNGTYVSAISEWTWGKAHGSQLGRRALPPAE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Sugar binding protein
molecule keywords Predicted protein
publication title Six independent fucose-binding sites in the crystal structure of Aspergillus oryzae lectin
pubmed doi rcsb
source organism Aspergillus oryzae rib40
total genus 73
structure length 311
sequence length 311
ec nomenclature
pdb deposition date 2015-11-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07938 Fungal_lectin Fungal fucose-specific lectin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.120.10.70 Mainly Beta 6 Propeller Neuraminidase Fucose-specific lectin 5eo8A00
4D52B 4D4UA 1IUCA 1IUBA 4AH4A 4C1YA 4D52A 5EO7A 4CSDA 5H47A 4D52C 4AHAA 4AGTA 5EO8A 1OFZA 4UOUA 4C1YB 4AGIA
chains in the Genus database with same CATH superfamily
2YDTA 4MWLA 4QN5A 4C1YA 1ZI0A 2IASA 1V04A 3SALA 4IFNX 4FPYA 3K38A 2QWJA 1MS5A 3TIBA 2F25A 1WP5A 5GX5A 1SO7A 4MWXA 1B9TA 2HTWA 4D4UA 3TICA 4XJ9A 4FPLA 3W09A 4I00A 4CHBA 1N1SA 2VK6A 4FPFA 1CRZA 1WCSA 3Q6PA 1MS8A 2QWDA 4X47A 1INHA 2QE8A 2HTQA 2HU4A 2VWDA 5HUNA 2POOA 4WA5A 4L7CA 4QN3A 1INGA 1IVGA 2FP9A 4Q1UA 5EO8A 1X2JA 2YA4A 4YW2A 4QNPA 2BF6A 1IJQA 2ZB5A 2FPBA 4XMAA 3OPZA 2AH2A 3NO0A 2ZZKA 1XOGA 3SANA 3A9HA 1E8VA 2XZKA 1MZ5A 4X6KA 4YY8A 1W8NA 3ZGCA 3Q6KA 2FLUX 1QLGA 1E1AA 3S94A 1NMAN 3E5ZA 3S2KA 2QWIA 4XJAA 1U6DX 3TIAA 4GJTA 2F29A 3LI3A 4HIZA 4GDJA 4K1KA 2HT7A 3TI8A 2C4AA 3V64C 5FNUA 3T1EA 5H47A 4FP3A 1V0EA 2B8HA 4KS1A 3I1CA 1IVCA 1V3EA 4QN4A 2W8BA 4GZXA 1MS9A 1Z50A 2GVVA 3H73A 1NN2A 2IAUA 1E8TA 2GHSA 1N1VA 2XN4A 2AEQA 1L7FA 2QWCA 2VW1A 1X2RA 4PWZA 5GX1A 3S8VA 5FNTA 4YW3A 3ADEA 3A9GA 3O4PA 4GNCA 2DG1A 2HU0A 2W5NA 4H53A 3WW9A 2IAWA 4XHXA 5GX2A 3CL2A 1F8EA 1RWIA 4K3YA 4XIKA 4GZQA 4X4AA 3O9KA 1RWLA 4MX0A 4B7RA 4D8SA 1NCBN 2DYHA 2A75A 2QWAA 4M3MA 4X49A 4GB1A 4GNAA 4MC7A 1B9VA 4GZWA 2HT8A 4AGTA 4IQKA 1NNBA 4XMIA 2VSMA 4FOYA 2FHRA 4KS4A 2IAPA 1WCQA 5CGJA 1Q7FA 4B7JA 1NNAA 3ALWA 1INYA 1MWEA 4JF7A 1IVBA 3SOBB 4GNBA 2V91A 3V65B 4NN9A 3SLIA 1N6DA 2YA7A 1INVA 2DSOA 4XIOA 1F8BA 1NSCA 3TI3A 5GTQA 1MR5A 4MWYA 3TI6A 4JMLA 1NSBA 4MWJA 4GN7A 2RKCA 1EUSA 4XE9A 1MS4A 1KITA 3AMRA 4L7DA 2HTRA 1INFA 1Z4ZA 1B9SA 5NN9A 2YA8A 4M4VA 4FOWA 3BYCA 4GN8A 3G4HA 1N1TA 1IUBA 4CPYA 4MJUA 4QN6A 2OJHA 3DASA 1N1YA 1VCJA 1E8UA 4SLIA 4B7NA 3GVJA 5F72C 2W5OA 4XHBA 3SOQA 4BBWA 2FP8A 3TC9A 4DG6A 4XJQA 3SRGA 4FVKA 4WEFA 2VK5A 2QWBA 4IN4A 4K1HA 4FQ4A 1IVDA 4IYGA 4MWQA 2GVXA 4FPHA 5FZNA 4D52A 4MWRA 4ZGCA 2IVZA 4C1YB 5HUGA 2CMLA 1NSDA 4FPGA 4CH9A 5EO7A 4GEZA 1USRA 3HRPA 1C9UA 3VNHA 4WA4A 1CQ1A 3O9JA 4XILA 5D9BA 1NCAN 2BERA 2QWGA 5GX3A 2QWKA 2ZW9A 3G4EA 3JU4A 4HW6A 7NN9A 3IAXA 3WWAA 4XYXA 5B2DA 4M4NA 3ALXA 3INBA 1INXA 1CVMA 4MJVA 2F24A 4O5TA 3H71A 4YW4A 4B7MA 2G8SA 2QWFA 2F12A 3D12A 1VCUA 2IAOA 3FW0A 4WEGA 1Z4VA 4MWVA 2YA5A 2YA6A 1L7GA 1NCCN 2BATA 3HLHA 3FVZA 5FNQA 2XCYA 4GDIA 1DILA 2IAQA 1NPEA 4YZ4A 3U0SA 1W20A 2IAVA 4QN7A 1N6EA 1V3BA 2F26A 4XJUA 4DGRA 4D52C 4XOGA 2IATA 3A72A 4HZZA 6NN9A 4XJRA 2H2NA 1F8DA 2W8BB 2P4OA 1S0JA 4O5SA 5HX0A 2F13A 1V2IA 1N6FA 1EUUA 1S1DA 2VK7A 4YW1A 3P5BL 3ZGDA 1XOEA 1S18A 5B2CA 5EX7A 2XZJA 4A0PA 1W8OA 4AH4A 1NNCA 2WOZA 3A71A 3KYAA 2F11A 4Q6KA 4IMBA 3V1SA 3SILA 1V0FA 4FOQA 4FP2A 4XMBA 2HTUA 3HLIA 3KGGA 4UOUA 1MZ6A 3AMSA 1Z4YA 1K32A 4GZTA 5M1ZA 4YZ5A 2XZIA 1SUUA 2BZDA 4AHAA 3BEQA 1N7DA 5FNRA 4HHOA 1A4QA 2VW2A 2VPJA 1IVFA 4K1JA 4MWWA 1EURA 4NC5A 3K39A 3VNGA 3K36A 4UF7A 3WDZA 2SIMA 1W21A 1PJXA 1IVEA 4K1IA 3D11A 3SREA 4IFLX 4FOVA 3GVLA 4G3NA 4ZLRA 2GVWA 2FPCA 3H72A 1MS0A 4FPJA 1OFZA 4GZOA 2F28A 1Z4WA 2Z32A 1EUTA 1NMBN 3II7A 2W20A 1MS3A 4WA3A 3NSSA 4IFJA 2YDPA 3K37A 1W0OA 2X9MA 4CPOA 1L7HA 2HTYA 4N1BA 2HQSA 2GVUA 2HTVA 1H6LA 3LI4A 2F10A 2F0ZA 4HZXA 2DG0A 1V3CA 4KS3A 4MZEA 2F27A 1POOA 4XJZA 4CPZA 4MZAA 4R40A 4GZPA 2QWEA 5FNSA 3TI4A 4HZYA 1DIMA 1A4GA 1USXA 1W0PA 1V3DA 2VSKA 3NN9A 3B7EA 4CPMA 4XJ8A 4FJ6A 3LI5A 4M4UA 1V0ZA 1NMCA 1A14N 2H2UA 2IARA 4HZWA 5HUKA 4XJWA 4YW5A 2IAXA 5FZJA 4ZY3A 4HHQA 3CYEA 4MWUA 4D52B 1BJIA 3S8ZA 4CPLA 2C4LA 1MS1A 2W38A 4KS2A 3TI5A 4L7BA 4HZVA 4H52A 1ZGKA 4YZ1A 2VW0A 1NCDN 3B69A 3CL0A 4J9TA 4CPNA 5JYYA 3Q6TA 4AGIA 2JKBA 1S0IA 3L6VA 2VAQA 4FPCA 4CSDA 4YZ2A 1Z4XA 2AEPA 4YZ3A 2QWHA 1SLLA 1CRUA 2SLIA 3SOVA 5HUMA 5D9DA 4GN9A 1INWA 4B7QA 3H6JA 2ZWAA 4NCSA 3UC1A 3PJQA 4KS5A 3WN7A 1F8CA 3CKZA 2HT5A 2VVZA 1W1XA 5F9TA 1IUCA 2ZB6A 2ISMA 3K3AA 4GZSA 3DR2A 2SILA 5FWWA 4FPKA 4ASCA 1SLIA 5GX4A 5D9CA 4FPEA 2AGSA 4FZHA 4FPOB 3GVKA 1QBIA 1SNTA 1C5KA
chains in the Genus database with same CATH topology
4D52B 4D4UA 1IUCA 1IUBA 4AH4A 4C1YA 4D52A 5EO7A 4CSDA 5H47A 4D52C 4AHAA 4AGTA 5EO8A 1OFZA 4UOUA 4C1YB 4AGIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4D52 B;  4D4U A;  1IUC A;  1IUB A;  4AH4 A;  4C1Y A;  4D52 A;  5EO7 A;  4CSD A;  5H47 A;  4D52 C;  4AHA A;  4AGT A;  5EO8 A;  1OFZ A;  4UOU A;  4C1Y B;  4AGI A; 
#chains in the Genus database with same CATH topology
 2YDT A;  4MWL A;  4QN5 A;  4C1Y A;  1ZI0 A;  2IAS A;  1V04 A;  3SAL A;  4IFN X;  4FPY A;  3K38 A;  2QWJ A;  1MS5 A;  3TIB A;  2F25 A;  1WP5 A;  5GX5 A;  1SO7 A;  4MWX A;  1B9T A;  2HTW A;  4D4U A;  3TIC A;  4XJ9 A;  4FPL A;  3W09 A;  4I00 A;  4CHB A;  1N1S A;  2VK6 A;  4FPF A;  1CRZ A;  1WCS A;  3Q6P A;  1MS8 A;  2QWD A;  4X47 A;  1INH A;  2QE8 A;  2HTQ A;  2HU4 A;  2VWD A;  5HUN A;  2POO A;  4WA5 A;  4L7C A;  4QN3 A;  1ING A;  1IVG A;  2FP9 A;  4Q1U A;  5EO8 A;  1X2J A;  2YA4 A;  4YW2 A;  4QNP A;  2BF6 A;  1IJQ A;  2ZB5 A;  2FPB A;  4XMA A;  3OPZ A;  2AH2 A;  3NO0 A;  2ZZK A;  1XOG A;  3SAN A;  3A9H A;  1E8V A;  2XZK A;  1MZ5 A;  4X6K A;  4YY8 A;  1W8N A;  3ZGC A;  3Q6K A;  2FLU X;  1QLG A;  1E1A A;  3S94 A;  1NMA N;  3E5Z A;  3S2K A;  2QWI A;  4XJA A;  1U6D X;  3TIA A;  4GJT A;  2F29 A;  3LI3 A;  4HIZ A;  4GDJ A;  4K1K A;  2HT7 A;  3TI8 A;  2C4A A;  3V64 C;  5FNU A;  3T1E A;  5H47 A;  4FP3 A;  1V0E A;  2B8H A;  4KS1 A;  3I1C A;  1IVC A;  1V3E A;  4QN4 A;  2W8B A;  4GZX A;  1MS9 A;  1Z50 A;  2GVV A;  3H73 A;  1NN2 A;  2IAU A;  1E8T A;  2GHS A;  1N1V A;  2XN4 A;  2AEQ A;  1L7F A;  2QWC A;  2VW1 A;  1X2R A;  4PWZ A;  5GX1 A;  3S8V A;  5FNT A;  4YW3 A;  3ADE A;  3A9G A;  3O4P A;  4GNC A;  2DG1 A;  2HU0 A;  2W5N A;  4H53 A;  3WW9 A;  2IAW A;  4XHX A;  5GX2 A;  3CL2 A;  1F8E A;  1RWI A;  4K3Y A;  4XIK A;  4GZQ A;  4X4A A;  3O9K A;  1RWL A;  4MX0 A;  4B7R A;  4D8S A;  1NCB N;  2DYH A;  2A75 A;  2QWA A;  4M3M A;  4X49 A;  4GB1 A;  4GNA A;  4MC7 A;  1B9V A;  4GZW A;  2HT8 A;  4AGT A;  4IQK A;  1NNB A;  4XMI A;  2VSM A;  4FOY A;  2FHR A;  4KS4 A;  2IAP A;  1WCQ A;  5CGJ A;  1Q7F A;  4B7J A;  1NNA A;  3ALW A;  1INY A;  1MWE A;  4JF7 A;  1IVB A;  3SOB B;  4GNB A;  2V91 A;  3V65 B;  4NN9 A;  3SLI A;  1N6D A;  2YA7 A;  1INV A;  2DSO A;  4XIO A;  1F8B A;  1NSC A;  3TI3 A;  5GTQ A;  1MR5 A;  4MWY A;  3TI6 A;  4JML A;  1NSB A;  4MWJ A;  4GN7 A;  2RKC A;  1EUS A;  4XE9 A;  1MS4 A;  1KIT A;  3AMR A;  4L7D A;  2HTR A;  1INF A;  1Z4Z A;  1B9S A;  5NN9 A;  2YA8 A;  4M4V A;  4FOW A;  3BYC A;  4GN8 A;  3G4H A;  1N1T A;  1IUB A;  4CPY A;  4MJU A;  4QN6 A;  2OJH A;  3DAS A;  1N1Y A;  1VCJ A;  1E8U A;  4SLI A;  4B7N A;  3GVJ A;  5F72 C;  2W5O A;  4XHB A;  3SOQ A;  4BBW A;  2FP8 A;  3TC9 A;  4DG6 A;  4XJQ A;  3SRG A;  4FVK A;  4WEF A;  2VK5 A;  2QWB A;  4IN4 A;  4K1H A;  4FQ4 A;  1IVD A;  4IYG A;  4MWQ A;  2GVX A;  4FPH A;  5FZN A;  4D52 A;  4MWR A;  4ZGC A;  2IVZ A;  4C1Y B;  5HUG A;  2CML A;  1NSD A;  4FPG A;  4CH9 A;  5EO7 A;  4GEZ A;  1USR A;  3HRP A;  1C9U A;  3VNH A;  4WA4 A;  1CQ1 A;  3O9J A;  4XIL A;  5D9B A;  1NCA N;  2BER A;  2QWG A;  5GX3 A;  2QWK A;  2ZW9 A;  3G4E A;  3JU4 A;  4HW6 A;  7NN9 A;  3IAX A;  3WWA A;  4XYX A;  5B2D A;  4M4N A;  3ALX A;  3INB A;  1INX A;  1CVM A;  4MJV A;  2F24 A;  4O5T A;  3H71 A;  4YW4 A;  4B7M A;  2G8S A;  2QWF A;  2F12 A;  3D12 A;  1VCU A;  2IAO A;  3FW0 A;  4WEG A;  1Z4V A;  4MWV A;  2YA5 A;  2YA6 A;  1L7G A;  1NCC N;  2BAT A;  3HLH A;  3FVZ A;  5FNQ A;  2XCY A;  4GDI A;  1DIL A;  2IAQ A;  1NPE A;  4YZ4 A;  3U0S A;  1W20 A;  2IAV A;  4QN7 A;  1N6E A;  1V3B A;  2F26 A;  4XJU A;  4DGR A;  4D52 C;  4XOG A;  2IAT A;  3A72 A;  4HZZ A;  6NN9 A;  4XJR A;  2H2N A;  1F8D A;  2W8B B;  2P4O A;  1S0J A;  4O5S A;  5HX0 A;  2F13 A;  1V2I A;  1N6F A;  1EUU A;  1S1D A;  2VK7 A;  4YW1 A;  3P5B L;  3ZGD A;  1XOE A;  1S18 A;  5B2C A;  5EX7 A;  2XZJ A;  4A0P A;  1W8O A;  4AH4 A;  1NNC A;  2WOZ A;  3A71 A;  3KYA A;  2F11 A;  4Q6K A;  4IMB A;  3V1S A;  3SIL A;  1V0F A;  4FOQ A;  4FP2 A;  4XMB A;  2HTU A;  3HLI A;  3KGG A;  4UOU A;  1MZ6 A;  3AMS A;  1Z4Y A;  1K32 A;  4GZT A;  5M1Z A;  4YZ5 A;  2XZI A;  1SUU A;  2BZD A;  4AHA A;  3BEQ A;  1N7D A;  5FNR A;  4HHO A;  1A4Q A;  2VW2 A;  2VPJ A;  1IVF A;  4K1J A;  4MWW A;  1EUR A;  4NC5 A;  3K39 A;  3VNG A;  3K36 A;  4UF7 A;  3WDZ A;  2SIM A;  1W21 A;  1PJX A;  1IVE A;  4K1I A;  3D11 A;  3SRE A;  4IFL X;  4FOV A;  3GVL A;  4G3N A;  4ZLR A;  2GVW A;  2FPC A;  3H72 A;  1MS0 A;  4FPJ A;  1OFZ A;  4GZO A;  2F28 A;  1Z4W A;  2Z32 A;  1EUT A;  1NMB N;  3II7 A;  2W20 A;  1MS3 A;  4WA3 A;  3NSS A;  4IFJ A;  2YDP A;  3K37 A;  1W0O A;  2X9M A;  4CPO A;  1L7H A;  2HTY A;  4N1B A;  2HQS A;  2GVU A;  2HTV A;  1H6L A;  3LI4 A;  2F10 A;  2F0Z A;  4HZX A;  2DG0 A;  1V3C A;  4KS3 A;  4MZE A;  2F27 A;  1POO A;  4XJZ A;  4CPZ A;  4MZA A;  4R40 A;  4GZP A;  2QWE A;  5FNS A;  3TI4 A;  4HZY A;  1DIM A;  1A4G A;  1USX A;  1W0P A;  1V3D A;  2VSK A;  3NN9 A;  3B7E A;  4CPM A;  4XJ8 A;  4FJ6 A;  3LI5 A;  4M4U A;  1V0Z A;  1NMC A;  1A14 N;  2H2U A;  2IAR A;  4HZW A;  5HUK A;  4XJW A;  4YW5 A;  2IAX A;  5FZJ A;  4ZY3 A;  4HHQ A;  3CYE A;  4MWU A;  4D52 B;  1BJI A;  3S8Z A;  4CPL A;  2C4L A;  1MS1 A;  2W38 A;  4KS2 A;  3TI5 A;  4L7B A;  4HZV A;  4H52 A;  1ZGK A;  4YZ1 A;  2VW0 A;  1NCD N;  3B69 A;  3CL0 A;  4J9T A;  4CPN A;  5JYY A;  3Q6T A;  4AGI A;  2JKB A;  1S0I A;  3L6V A;  2VAQ A;  4FPC A;  4CSD A;  4YZ2 A;  1Z4X A;  2AEP A;  4YZ3 A;  2QWH A;  1SLL A;  1CRU A;  2SLI A;  3SOV A;  5HUM A;  5D9D A;  4GN9 A;  1INW A;  4B7Q A;  3H6J A;  2ZWA A;  4NCS A;  3UC1 A;  3PJQ A;  4KS5 A;  3WN7 A;  1F8C A;  3CKZ A;  2HT5 A;  2VVZ A;  1W1X A;  5F9T A;  1IUC A;  2ZB6 A;  2ISM A;  3K3A A;  4GZS A;  3DR2 A;  2SIL A;  5FWW A;  4FPK A;  4ASC A;  1SLI A;  5GX4 A;  5D9C A;  4FPE A;  2AGS A;  4FZH A;  4FPO B;  3GVK A;  1QBI A;  1SNT A;  1C5K A; 
#chains in the Genus database with same CATH homology
 4D52 B;  4D4U A;  1IUC A;  1IUB A;  4AH4 A;  4C1Y A;  4D52 A;  5EO7 A;  4CSD A;  5H47 A;  4D52 C;  4AHA A;  4AGT A;  5EO8 A;  1OFZ A;  4UOU A;  4C1Y B;  4AGI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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