2VPJA

Crystal structure of the kelch domain of human klhl12
Total Genus 62

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
289
structure length
289
Chain Sequence
ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLRE

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYS2 (289-290)S1 (281-286)Updating...
connected with : NaN
molecule tags Protein binding
source organism Homo sapiens
publication title Structural Basis for Cul3 Assembly with the Btb-Kelch Family of E3 Ubiquitin Ligases.
pubmed doi rcsb
molecule keywords KELCH-LIKE PROTEIN 12
total genus 62
structure length 289
sequence length 289
ec nomenclature
pdb deposition date 2008-02-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01344 Kelch_1 Kelch motif
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.120.10.80 Mainly Beta 6 Propeller Neuraminidase Kelch-type beta propeller 2vpjA00
4CHBA 3VNHA 2XN4A 4L7DA 4CH9A 5FNUA 1U6DX 5FNRA 2FLUX 4IQKA 2Z32A 4ASCA 1X2JA 1X2RA 4IFNX 4YY8A 2WOZA 4IN4A 5F72C 2ZWAA 2DYHA 4IFLX 2ZZKA 4ZY3A 3ZGDA 3ZGCA 5FZNA 3VNGA 5FNTA 2VPJA 1ZGKA 3WDZA 3II7A 4N1BA 4ZGCA 3WN7A 4L7CA 4XMBA 4L7BA 5FNQA 5FZJA 5FNSA 5CGJA 3ADEA 2ZW9A 4IFJA
chains in the Genus database with same CATH superfamily
3LI5A 4XOGA 1S0JA 4HW6A 1CVMA 4GJTA 2RKCA 5D9BA 5FWWA 2VVZA 1W0OA 2DG1A 4SLIA 4NN9A 4FPKA 1N6FA 1W1XA 4B7NA 1F8EA 3UC1A 2GVWA 2HT7A 5FZNA 5M1ZA 1INYA 3WDZA 1V3EA 4XMBA 4FOQA 4K1JA 4GZWA 4XJRA 2P4OA 3A9HA 5HUGA 1USXA 4FP2A 1Z50A 4AGIA 4YZ3A 3K3AA 2GHSA 1ZI0A 4X47A 2YDTA 1V04A 2IAWA 4FPGA 3K36A 3DASA 1INFA 3SALA 1WCSA 4H52A 1IVDA 4NC5A 2QE8A 1INWA 3DR2A 4MX0A 1CRZA 3H6JA 4YW5A 2W5OA 1B9TA 4K1IA 1V3CA 3P5BL 1RWIA 1WCQA 4FP3A 4K1KA 4C1YA 3U0SA 1MS3A 4L7BA 4MWUA 3O9JA 2FP8A 7NN9A 1SNTA 1K32A 2C4AA 1MS5A 4HZZA 3ALXA 4YZ5A 3PJQA 2OJHA 3A9GA 3T1EA 4WA4A 1BJIA 3H72A 4XJQA 4M4NA 3WWAA 3S94A 1MZ5A 4IQKA 4XJWA 2YA4A 1EUTA 4IMBA 2F24A 2VK7A 2BZDA 2HU0A 3G4HA 2W8BB 4ZGCA 1MS1A 3WN7A 4D52B 1W8OA 2HU4A 1NMBN 1V3DA 2HTYA 3CL0A 3TI3A 2G8SA 4GNAA 1CQ1A 4XHXA 1MS0A 1S1DA 1NCBN 5FNUA 1EUUA 2QWCA 2FLUX 2IAPA 3L6VA 3FW0A 2F28A 2Z32A 2H2UA 4CSDA 4FPOB 4FOWA 4XJ8A 4B7RA 3TI8A 4GB1A 2AEPA 2XCYA 4GZTA 3ALWA 2VW0A 4FPCA 4X6KA 1L7GA 4O5TA 1V3BA 1CRUA 2YA6A 4JF7A 4GZQA 1C5KA 2YA8A 2VK5A 4FOVA 5EO7A 3D11A 4MWVA 4MWQA 1Z4WA 4IYGA 3LI3A 1V0ZA 2A75A 4JMLA 5NN9A 1L7HA 4CPLA 1NN2A 1SLLA 5HX0A 2ZZKA 3TIAA 1V0FA 4XIOA 1ZGKA 1IVFA 4D52C 3S8ZA 3CL2A 2F25A 3G4EA 3SOBB 1S0IA 2W38A 4XYXA 4MWWA 4XMIA 3FVZA 5B2DA 3VNHA 5F9TA 5H47A 3NSSA 1MS8A 1IVEA 1RWLA 1W8NA 4MJUA 1E1AA 3HLHA 4GZSA 3ZGDA 2VW1A 4GN7A 4QN3A 2QWKA 2VSKA 4I00A 1Z4VA 3VNGA 5GTQA 2VK6A 1WP5A 1NCCN 4HZWA 1B9SA 4K1HA 4G3NA 4CHBA 4FZHA 4CPMA 1IVCA 2CMLA 1EUSA 1NCDN 4H53A 3TIBA 2XZJA 4HHOA 5D9CA 4A0PA 4GN9A 1N7DA 2ZB5A 3KGGA 3SRGA 1NPEA 4HHQA 2W8BA 4FVKA 1QBIA 4GEZA 4GNCA 4D52A 4CPOA 4PWZA 5FZJA 2IAXA 3OPZA 3K38A 5HUKA 3SLIA 2HTUA 4L7DA 4WA3A 1A4GA 4CPYA 1V0EA 4WEGA 3LI4A 3W09A 1U6DX 3TC9A 3TI4A 2GVUA 3AMRA 2QWFA 1X2JA 4IFNX 1F8CA 4XE9A 4YZ1A 3ZGCA 4FPYA 4GZPA 1VCJA 4XHBA 4CPZA 2C4LA 4O5SA 1IVGA 3ADEA 3S2KA 2DSOA 1XOEA 2IAVA 2POOA 3AMSA 3H73A 4B7QA 3GVLA 3D12A 1IUCA 4M3MA 1MWEA 4B7MA 2W20A 4DGRA 3SOVA 1PJXA 2DYHA 4ZY3A 2QWIA 1NMCA 1S18A 3K39A 4MWYA 4B7JA 3SREA 3II7A 1NSBA 4GNBA 4MJVA 2QWJA 2ZB6A 1F8DA 1E8TA 4AH4A 5FNSA 5CGJA 4FJ6A 4QNPA 1N6EA 1SLIA 2IASA 4L7CA 5GX4A 2AEQA 1C9UA 1Z4YA 4YW1A 4ZLRA 4FPEA 4HZXA 1VCUA 1POOA 1NNCA 4XJUA 3Q6PA 2F27A 4ASCA 3H71A 4QN4A 2VWDA 4FPHA 4HIZA 5FNTA 2HT5A 2F10A 3CKZA 1NSDA 1W20A 3HLIA 2QWGA 5D9DA 5JYYA 2ZW9A 4KS2A 3SILA 4X4AA 4GDJA 3CYEA 2HTQA 4YW3A 5EX7A 1DILA 1QLGA 4FPJA 3A71A 4J9TA 4M4VA 2WOZA 5F72C 5GX5A 2SIMA 1INVA 3HRPA 2IARA 3B7EA 4MWRA 2B8HA 1NCAN 2QWAA 4K3YA 3INBA 4MWJA 4YW2A 2IATA 4MZEA 5HUMA 4KS1A 1N1SA 1W21A 4WA5A 1DIMA 3K37A 4X49A 1N1VA 4CPNA 1INGA 2BATA 1SUUA 4XJAA 2AH2A 4YZ4A 4GN8A 4Q1UA 2HTVA 2IAUA 4FOYA 1SO7A 1MR5A 1V2IA 1INHA 4FQ4A 3KYAA 2QWDA 3TI6A 3NO0A 4YY8A 4BBWA 1NSCA 1E8VA 3TICA 4MWLA 1E8UA 3Q6TA 4DG6A 2SILA 1IVBA 4N1BA 5GX1A 2X9MA 1MS4A 5FNQA 2ISMA 2YA7A 2YDPA 4D4UA 1Z4ZA 4KS5A 3V1SA 3V64C 1A14N 3Q6KA 2AGSA 2XN4A 2VSMA 1MZ6A 3SANA 2F12A 1X2RA 1N6DA 3A72A 2VAQA 3WW9A 2IAOA 4D8SA 2JKBA 2SLIA 1H6LA 2FP9A 3SOQA 2V91A 1NMAN 2IVZA 3GVKA 3TI5A 1A4QA 3I1CA 1XOGA 2HTRA 3IAXA 2IAQA 4Q6KA 5B2CA 6NN9A 2HTWA 2XZKA 1OFZA 2QWHA 2HQSA 4XJ9A 4MZAA 2F13A 4QN5A 4UOUA 5EO8A 4C1YB 4YZ2A 2VPJA 2QWEA 4HZVA 4QN6A 4FPLA 4NCSA 2F11A 4MC7A 1Z4XA 1USRA 4XMAA 4M4UA 2FPBA 3BYCA 2XZIA 2FHRA 2H2NA 3E5ZA 4UF7A 1NNBA 3O9KA 4XILA 1MS9A 1N1YA 4AGTA 1NNAA 2FPCA 2F26A 3S8VA 4AHAA 4GZXA 4IN4A 1W0PA 3BEQA 3NN9A 4QN7A 4KS4A 4HZYA 3O4PA 4XJZA 2BERA 2F29A 4GDIA 2HT8A 3V65B 4R40A 1IUBA 1N1TA 5GX3A 4IFJA 3JU4A 1IJQA 5GX2A 1KITA 1F8BA 4WEFA 1EURA 4XIKA 4YW4A 2BF6A 4CH9A 2F0ZA 4GZOA 5FNRA 4KS3A 1L7FA 2ZWAA 2GVXA 2GVVA 2W5NA 4IFLX 3GVJA 1INXA 3B69A 5HUNA 2YA5A 4MWXA 2QWBA 2DG0A 2VW2A 1Q7FA 4FPFA 1B9VA
chains in the Genus database with same CATH topology
4CHBA 3VNHA 2XN4A 4L7DA 4CH9A 5FNUA 1U6DX 5FNRA 2FLUX 4IQKA 2Z32A 4ASCA 1X2JA 1X2RA 4IFNX 4YY8A 2WOZA 4IN4A 5F72C 2ZWAA 2DYHA 4IFLX 2ZZKA 4ZY3A 3ZGDA 3ZGCA 5FZNA 3VNGA 5FNTA 2VPJA 1ZGKA 3WDZA 3II7A 4N1BA 4ZGCA 3WN7A 4L7CA 4XMBA 4L7BA 5FNQA 5FZJA 5FNSA 5CGJA 3ADEA 2ZW9A 4IFJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4CHB A;  3VNH A;  2XN4 A;  4L7D A;  4CH9 A;  5FNU A;  1U6D X;  5FNR A;  2FLU X;  4IQK A;  2Z32 A;  4ASC A;  1X2J A;  1X2R A;  4IFN X;  4YY8 A;  2WOZ A;  4IN4 A;  5F72 C;  2ZWA A;  2DYH A;  4IFL X;  2ZZK A;  4ZY3 A;  3ZGD A;  3ZGC A;  5FZN A;  3VNG A;  5FNT A;  2VPJ A;  1ZGK A;  3WDZ A;  3II7 A;  4N1B A;  4ZGC A;  3WN7 A;  4L7C A;  4XMB A;  4L7B A;  5FNQ A;  5FZJ A;  5FNS A;  5CGJ A;  3ADE A;  2ZW9 A;  4IFJ A; 
#chains in the Genus database with same CATH topology
 3LI5 A;  4XOG A;  1S0J A;  4HW6 A;  1CVM A;  4GJT A;  2RKC A;  5D9B A;  5FWW A;  2VVZ A;  1W0O A;  2DG1 A;  4SLI A;  4NN9 A;  4FPK A;  1N6F A;  1W1X A;  4B7N A;  1F8E A;  3UC1 A;  2GVW A;  2HT7 A;  5FZN A;  5M1Z A;  1INY A;  3WDZ A;  1V3E A;  4XMB A;  4FOQ A;  4K1J A;  4GZW A;  4XJR A;  2P4O A;  3A9H A;  5HUG A;  1USX A;  4FP2 A;  1Z50 A;  4AGI A;  4YZ3 A;  3K3A A;  2GHS A;  1ZI0 A;  4X47 A;  2YDT A;  1V04 A;  2IAW A;  4FPG A;  3K36 A;  3DAS A;  1INF A;  3SAL A;  1WCS A;  4H52 A;  1IVD A;  4NC5 A;  2QE8 A;  1INW A;  3DR2 A;  4MX0 A;  1CRZ A;  3H6J A;  4YW5 A;  2W5O A;  1B9T A;  4K1I A;  1V3C A;  3P5B L;  1RWI A;  1WCQ A;  4FP3 A;  4K1K A;  4C1Y A;  3U0S A;  1MS3 A;  4L7B A;  4MWU A;  3O9J A;  2FP8 A;  7NN9 A;  1SNT A;  1K32 A;  2C4A A;  1MS5 A;  4HZZ A;  3ALX A;  4YZ5 A;  3PJQ A;  2OJH A;  3A9G A;  3T1E A;  4WA4 A;  1BJI A;  3H72 A;  4XJQ A;  4M4N A;  3WWA A;  3S94 A;  1MZ5 A;  4IQK A;  4XJW A;  2YA4 A;  1EUT A;  4IMB A;  2F24 A;  2VK7 A;  2BZD A;  2HU0 A;  3G4H A;  2W8B B;  4ZGC A;  1MS1 A;  3WN7 A;  4D52 B;  1W8O A;  2HU4 A;  1NMB N;  1V3D A;  2HTY A;  3CL0 A;  3TI3 A;  2G8S A;  4GNA A;  1CQ1 A;  4XHX A;  1MS0 A;  1S1D A;  1NCB N;  5FNU A;  1EUU A;  2QWC A;  2FLU X;  2IAP A;  3L6V A;  3FW0 A;  2F28 A;  2Z32 A;  2H2U A;  4CSD A;  4FPO B;  4FOW A;  4XJ8 A;  4B7R A;  3TI8 A;  4GB1 A;  2AEP A;  2XCY A;  4GZT A;  3ALW A;  2VW0 A;  4FPC A;  4X6K A;  1L7G A;  4O5T A;  1V3B A;  1CRU A;  2YA6 A;  4JF7 A;  4GZQ A;  1C5K A;  2YA8 A;  2VK5 A;  4FOV A;  5EO7 A;  3D11 A;  4MWV A;  4MWQ A;  1Z4W A;  4IYG A;  3LI3 A;  1V0Z A;  2A75 A;  4JML A;  5NN9 A;  1L7H A;  4CPL A;  1NN2 A;  1SLL A;  5HX0 A;  2ZZK A;  3TIA A;  1V0F A;  4XIO A;  1ZGK A;  1IVF A;  4D52 C;  3S8Z A;  3CL2 A;  2F25 A;  3G4E A;  3SOB B;  1S0I A;  2W38 A;  4XYX A;  4MWW A;  4XMI A;  3FVZ A;  5B2D A;  3VNH A;  5F9T A;  5H47 A;  3NSS A;  1MS8 A;  1IVE A;  1RWL A;  1W8N A;  4MJU A;  1E1A A;  3HLH A;  4GZS A;  3ZGD A;  2VW1 A;  4GN7 A;  4QN3 A;  2QWK A;  2VSK A;  4I00 A;  1Z4V A;  3VNG A;  5GTQ A;  2VK6 A;  1WP5 A;  1NCC N;  4HZW A;  1B9S A;  4K1H A;  4G3N A;  4CHB A;  4FZH A;  4CPM A;  1IVC A;  2CML A;  1EUS A;  1NCD N;  4H53 A;  3TIB A;  2XZJ A;  4HHO A;  5D9C A;  4A0P A;  4GN9 A;  1N7D A;  2ZB5 A;  3KGG A;  3SRG A;  1NPE A;  4HHQ A;  2W8B A;  4FVK A;  1QBI A;  4GEZ A;  4GNC A;  4D52 A;  4CPO A;  4PWZ A;  5FZJ A;  2IAX A;  3OPZ A;  3K38 A;  5HUK A;  3SLI A;  2HTU A;  4L7D A;  4WA3 A;  1A4G A;  4CPY A;  1V0E A;  4WEG A;  3LI4 A;  3W09 A;  1U6D X;  3TC9 A;  3TI4 A;  2GVU A;  3AMR A;  2QWF A;  1X2J A;  4IFN X;  1F8C A;  4XE9 A;  4YZ1 A;  3ZGC A;  4FPY A;  4GZP A;  1VCJ A;  4XHB A;  4CPZ A;  2C4L A;  4O5S A;  1IVG A;  3ADE A;  3S2K A;  2DSO A;  1XOE A;  2IAV A;  2POO A;  3AMS A;  3H73 A;  4B7Q A;  3GVL A;  3D12 A;  1IUC A;  4M3M A;  1MWE A;  4B7M A;  2W20 A;  4DGR A;  3SOV A;  1PJX A;  2DYH A;  4ZY3 A;  2QWI A;  1NMC A;  1S18 A;  3K39 A;  4MWY A;  4B7J A;  3SRE A;  3II7 A;  1NSB A;  4GNB A;  4MJV A;  2QWJ A;  2ZB6 A;  1F8D A;  1E8T A;  4AH4 A;  5FNS A;  5CGJ A;  4FJ6 A;  4QNP A;  1N6E A;  1SLI A;  2IAS A;  4L7C A;  5GX4 A;  2AEQ A;  1C9U A;  1Z4Y A;  4YW1 A;  4ZLR A;  4FPE A;  4HZX A;  1VCU A;  1POO A;  1NNC A;  4XJU A;  3Q6P A;  2F27 A;  4ASC A;  3H71 A;  4QN4 A;  2VWD A;  4FPH A;  4HIZ A;  5FNT A;  2HT5 A;  2F10 A;  3CKZ A;  1NSD A;  1W20 A;  3HLI A;  2QWG A;  5D9D A;  5JYY A;  2ZW9 A;  4KS2 A;  3SIL A;  4X4A A;  4GDJ A;  3CYE A;  2HTQ A;  4YW3 A;  5EX7 A;  1DIL A;  1QLG A;  4FPJ A;  3A71 A;  4J9T A;  4M4V A;  2WOZ A;  5F72 C;  5GX5 A;  2SIM A;  1INV A;  3HRP A;  2IAR A;  3B7E A;  4MWR A;  2B8H A;  1NCA N;  2QWA A;  4K3Y A;  3INB A;  4MWJ A;  4YW2 A;  2IAT A;  4MZE A;  5HUM A;  4KS1 A;  1N1S A;  1W21 A;  4WA5 A;  1DIM A;  3K37 A;  4X49 A;  1N1V A;  4CPN A;  1ING A;  2BAT A;  1SUU A;  4XJA A;  2AH2 A;  4YZ4 A;  4GN8 A;  4Q1U A;  2HTV A;  2IAU A;  4FOY A;  1SO7 A;  1MR5 A;  1V2I A;  1INH A;  4FQ4 A;  3KYA A;  2QWD A;  3TI6 A;  3NO0 A;  4YY8 A;  4BBW A;  1NSC A;  1E8V A;  3TIC A;  4MWL A;  1E8U A;  3Q6T A;  4DG6 A;  2SIL A;  1IVB A;  4N1B A;  5GX1 A;  2X9M A;  1MS4 A;  5FNQ A;  2ISM A;  2YA7 A;  2YDP A;  4D4U A;  1Z4Z A;  4KS5 A;  3V1S A;  3V64 C;  1A14 N;  3Q6K A;  2AGS A;  2XN4 A;  2VSM A;  1MZ6 A;  3SAN A;  2F12 A;  1X2R A;  1N6D A;  3A72 A;  2VAQ A;  3WW9 A;  2IAO A;  4D8S A;  2JKB A;  2SLI A;  1H6L A;  2FP9 A;  3SOQ A;  2V91 A;  1NMA N;  2IVZ A;  3GVK A;  3TI5 A;  1A4Q A;  3I1C A;  1XOG A;  2HTR A;  3IAX A;  2IAQ A;  4Q6K A;  5B2C A;  6NN9 A;  2HTW A;  2XZK A;  1OFZ A;  2QWH A;  2HQS A;  4XJ9 A;  4MZA A;  2F13 A;  4QN5 A;  4UOU A;  5EO8 A;  4C1Y B;  4YZ2 A;  2VPJ A;  2QWE A;  4HZV A;  4QN6 A;  4FPL A;  4NCS A;  2F11 A;  4MC7 A;  1Z4X A;  1USR A;  4XMA A;  4M4U A;  2FPB A;  3BYC A;  2XZI A;  2FHR A;  2H2N A;  3E5Z A;  4UF7 A;  1NNB A;  3O9K A;  4XIL A;  1MS9 A;  1N1Y A;  4AGT A;  1NNA A;  2FPC A;  2F26 A;  3S8V A;  4AHA A;  4GZX A;  4IN4 A;  1W0P A;  3BEQ A;  3NN9 A;  4QN7 A;  4KS4 A;  4HZY A;  3O4P A;  4XJZ A;  2BER A;  2F29 A;  4GDI A;  2HT8 A;  3V65 B;  4R40 A;  1IUB A;  1N1T A;  5GX3 A;  4IFJ A;  3JU4 A;  1IJQ A;  5GX2 A;  1KIT A;  1F8B A;  4WEF A;  1EUR A;  4XIK A;  4YW4 A;  2BF6 A;  4CH9 A;  2F0Z A;  4GZO A;  5FNR A;  4KS3 A;  1L7F A;  2ZWA A;  2GVX A;  2GVV A;  2W5N A;  4IFL X;  3GVJ A;  1INX A;  3B69 A;  5HUN A;  2YA5 A;  4MWX A;  2QWB A;  2DG0 A;  2VW2 A;  1Q7F A;  4FPF A;  1B9V A; 
#chains in the Genus database with same CATH homology
 4CHB A;  3VNH A;  2XN4 A;  4L7D A;  4CH9 A;  5FNU A;  1U6D X;  5FNR A;  2FLU X;  4IQK A;  2Z32 A;  4ASC A;  1X2J A;  1X2R A;  4IFN X;  4YY8 A;  2WOZ A;  4IN4 A;  5F72 C;  2ZWA A;  2DYH A;  4IFL X;  2ZZK A;  4ZY3 A;  3ZGD A;  3ZGC A;  5FZN A;  3VNG A;  5FNT A;  2VPJ A;  1ZGK A;  3WDZ A;  3II7 A;  4N1B A;  4ZGC A;  3WN7 A;  4L7C A;  4XMB A;  4L7B A;  5FNQ A;  5FZJ A;  5FNS A;  5CGJ A;  3ADE A;  2ZW9 A;  4IFJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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