4AHA | Genus

Total Genus 80

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	80
sequence length	314
structure length	314
Chain Sequence	STPGAQQVLFRTGIAAVNSTNHLRVYFQDVYGSIRESLYEGSWANGTEKNVIGNAKLGSPVAATSKELKHIRVYTLTEGNTLQEFAYDSGTGWYNGGLGGAKFQVAPYSCIAAVFLAGTDALQLRIYAQKPDNTIQEYMWNGDGWKEGTNLGGALPGTGIGATSFRYTDYNGPSIRIWFQTDDLKLVQRAYDPHKGWYPDLVTIFDRAPPRTAIAATSFGAGNSSIYMRIYFVNSDNTIWQVCWDHGKGYHDKGTITPVIQGSEVAIISWGSFANNGPDLRLYFQNGTYISAVSEWVWNRAHGSQLGRSALPPA

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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Sugar binding protein
source organism	Aspergillus fumigatus
publication title	Structural Insights Into Aspergillus Fumigatus Lectin Specificity: Afl Binding Sites are Functionally Non-Equivalent pubmed doi rcsb
molecule keywords	FUCOSE-SPECIFIC LECTIN FLEA
total genus	80
structure length	314
sequence length	314
chains with identical sequence	B
ec nomenclature
pdb deposition date	2012-02-06

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF07938	Fungal_lectin	Fungal fucose-specific lectin

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.120.10.70	Mainly Beta	6 Propeller	Neuraminidase	Fucose-specific lectin	4ahaA00

4C1YA 4AHAA 1IUBA 4UOUA 1IUCA 4AH4A 5EO7A 4D52A 4D52B 4AGIA 4D4UA 4CSDA 5EO8A 1OFZA 4AGTA 4C1YB 5H47A 4D52C
chains in the Genus database with same CATH superfamily

2VK7A 4AHAA 2VWDA 3CL0A 3A72A 4GEZA 4D4UA 2F13A 5FZNA 1V3BA 1C5KA 2IATA 2BERA 1IVFA 2F10A 3Q6PA 2IARA 2VAQA 4Q1UA 3G4EA 3ZGDA 4K1HA 5JYYA 4GNCA 3KYAA 1VCUA 4HHQA 4C1YB 4MX0A 1NCDN 4X4AA 1MS0A 4R40A 1OFZA 2XCYA 1CVMA 1SLIA 2ZW9A 1E8VA 4WEFA 1W8NA 4XJWA 1CQ1A 1MS8A 4MWUA 3FW0A 4XHBA 3VNGA 1IVCA 2YA4A 2HTRA 1RWLA 4K1JA 3JU4A 1EURA 4YY8A 4B7RA 1XOGA 4G3NA 2DG1A 4GN8A 4FPGA 5GX5A 3G4HA 2IAUA 2AH2A 5D9CA 3GVLA 3SILA 4MWJA 5GX1A 4XIOA 1SLLA 1N1YA 3O9KA 1Z4ZA 4GNBA 4MJVA 3B7EA 3LI5A 1NSCA 4IMBA 4HZZA 4KS2A 1B9SA 3HLIA 4K1KA 1NN2A 4XMAA 3NSSA 4IFJA 4DGRA 4YZ2A 2GVUA 2C4LA 2QWDA 2BF6A 3VNHA 3K37A 4X47A 4XJ8A 1V0FA 2ISMA 4CHBA 1IUBA 2VSMA 4GZQA 1F8BA 2VK6A 4FP3A 3NN9A 4B7MA 1E8TA 1BJIA 4AGIA 6NN9A 4JF7A 1USXA 4UOUA 2YDPA 1F8DA 3ZGCA 4MWLA 5HUKA 2DG0A 4YW2A 5GTQA 3WN7A 4DG6A 2HTUA 4YW4A 4IQKA 2QE8A 1EUSA 1N1SA 2XN4A 5F72C 3L6VA 1CRZA 1N1VA 3S8ZA 4NN9A 2XZJA 1INHA 3O9JA 5FNRA 3TI3A 4FOWA 1MZ6A 3K36A 4GZOA 4XJRA 4FZHA 3Q6KA 1MR5A 4K1IA 3H72A 4MWVA 4H53A 4QN4A 3LI3A 3TI5A 1N1TA 4FPOB 1SO7A 3UC1A 1ZI0A 1V3DA 1U6DX 3A9GA 1A14N 3GVJA 3INBA 2F29A 4N1BA 4D8SA 4FJ6A 4FP2A 4FPLA 4QNPA 3TI4A 3ALWA 1IUCA 4Q6KA 4WA4A 4QN3A 4KS4A 1PJXA 4QN6A 1NNCA 4D52C 2FLUX 2VPJA 1W1XA 1B9VA 1W20A 1W0PA 1USRA 2V91A 4M3MA 1MZ5A 4FOQA 4MWYA 2F11A 2SLIA 1S0IA 2QWFA 5F9TA 2SIMA 2POOA 3V1SA 5B2DA 2FP9A 5FNTA 4IN4A 5FNQA 3LI4A 2QWIA 4CSDA 1INGA 3DR2A 4A0PA 2F12A 4FPYA 4JMLA 3Q6TA 2QWGA 1MS5A 5FZJA 1WCSA 4FPKA 4FOVA 4GZTA 4CH9A 5EO7A 4KS5A 3TICA 4O5SA 2QWJA 1NSDA 3TIAA 4XHXA 3AMSA 2ZWAA 4C1YA 3KGGA 1E8UA 4I00A 3H73A 3CKZA 1IVEA 4GB1A 4SLIA 2JKBA 4HIZA 2AGSA 3ADEA 4B7QA 2OJHA 2HT7A 5GX3A 4IFLX 3SOBB 1C9UA 4D52B 3SALA 2CMLA 5HUGA 3B69A 2W8BB 3CYEA 1IVDA 4J9TA 4FPCA 5EO8A 1W8OA 2HQSA 5GX4A 4XIKA 3IAXA 2IASA 4YZ1A 3P5BL 1F8EA 2P4OA 4WA3A 4CPNA 1V04A 2FP8A 4HZWA 3ALXA 3SOVA 2C4AA 1NPEA 1NCCN 4GZWA 2YA5A 1N6FA 2HT8A 4MJUA 3W09A 2HTQA 1IVGA 2YA8A 4FPEA 1V3CA 2ZB5A 2GVVA 4CPYA 2YDTA 4M4NA 1IVBA 4HZXA 3O4PA 4FPJA 4HZVA 2XZIA 4ASCA 3SANA 2QWCA 2IAPA 3K38A 2QWHA 5H47A 4H52A 2F28A 1S1DA 3DASA 2SILA 4MWXA 2W5OA 4O5TA 3S8VA 2YA7A 4KS3A 1KITA 3PJQA 3GVKA 2DSOA 2AEQA 4PWZA 1SUUA 1INVA 2VK5A 1X2RA 5M1ZA 2GVXA 3NO0A 4NCSA 5CGJA 4AGTA 1L7FA 1E1AA 3WWAA 3AMRA 4FQ4A 7NN9A 2IAOA 1VCJA 5FNSA 1V0ZA 4YW3A 1MS1A 2HT5A 3I1CA 1Z50A 1ZGKA 4GNAA 1N6EA 4GDJA 4MWRA 1V0EA 2RKCA 1V3EA 1MS9A 4QN5A 5GX2A 1Z4VA 4L7CA 3D11A 3H71A 1Z4XA 4ZY3A 4HHOA 3SOQA 4X6KA 1QBIA 4GJTA 1INFA 1CRUA 1NCBN 5FWWA 1IJQA 2VW2A 3BEQA 1B9TA 4MC7A 2IAXA 2F24A 4HW6A 4HZYA 1WP5A 2F26A 2DYHA 1Z4YA 2IAVA 2XZKA 2H2NA 4IFNX 3S94A 1QLGA 1SNTA 3BYCA 2VW0A 4B7JA 4XJAA 5HX0A 3OPZA 4YW1A 1MWEA 4CPZA 4CPMA 1V2IA 1MS3A 5HUMA 1WCQA 4B7NA 4XYXA 1XOEA 2W38A 1NSBA 4WA5A 4YZ5A 4MZEA 4X49A 4FVKA 3SRGA 4M4UA 3CL2A 2GVWA 2IAQA 2F27A 1A4QA 4XJUA 4L7BA 1DILA 3TI6A 3TIBA 5B2CA 1DIMA 1INYA 3FVZA 1N6DA 4MZAA 4XMBA 1MS4A 1NNAA 3SREA 4D52A 4UF7A 2W8BA 2B8HA 2HTVA 1S0JA 3T1EA 2HTWA 3K39A 2F25A 2FPBA 4YZ3A 4YW5A 2WOZA 4MWWA 4XJQA 3S2KA 1H6LA 3HRPA 1Q7FA 1L7GA 5EX7A 2HU4A 3HLHA 3TC9A 1Z4WA 2QWBA 4K3YA 3E5ZA 3V65B 2VSKA 1F8CA 3WW9A 3TI8A 3K3AA 1S18A 4KS1A 2ZB6A 5FNUA 1W21A 1NNBA 1A4GA 4MWQA 5D9DA 4CPOA 4XJ9A 2QWEA 2BATA 2VVZA 2YA6A 2A75A 2F0ZA 3SLIA 2AEPA 3D12A 4FPFA 2ZZKA 1NMAN 1RWIA 2HTYA 1L7HA 3U0SA 4XE9A 4YZ4A 1POOA 2BZDA 3II7A 1K32A 4GZXA 4XOGA 3WDZA 2VW1A 2Z32A 4GZPA 5HUNA 4ZGCA 1EUUA 2IAWA 4GN9A 2GHSA 4NC5A 4CPLA 1INWA 1NMBN 4XMIA 2W20A 3A71A 2QWAA 3H6JA 2IVZA 1N7DA 5NN9A 5D9BA 4M4VA 4ZLRA 4GZSA 2FPCA 1NCAN 4FPHA 2QWKA 3V64C 1NMCA 4WEGA 4L7DA 4AH4A 4IYGA 2W5NA 2X9MA 2FHRA 2G8SA 4XILA 4QN7A 2HU0A 1EUTA 4FOYA 4GN7A 2H2UA 4XJZA 1INXA 1X2JA 3A9HA 4BBWA 1W0OA 4GDIA
chains in the Genus database with same CATH topology

4C1YA 4AHAA 1IUBA 4UOUA 1IUCA 4AH4A 5EO7A 4D52A 4D52B 4AGIA 4D4UA 4CSDA 5EO8A 1OFZA 4AGTA 4C1YB 5H47A 4D52C
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 4C1Y A;  4AHA A;  1IUB A;  4UOU A;  1IUC A;  4AH4 A;  5EO7 A;  4D52 A;  4D52 B;  4AGI A;  4D4U A;  4CSD A;  5EO8 A;  1OFZ A;  4AGT A;  4C1Y B;  5H47 A;  4D52 C; 
#chains in the Genus database with same CATH topology
 2VK7 A;  4AHA A;  2VWD A;  3CL0 A;  3A72 A;  4GEZ A;  4D4U A;  2F13 A;  5FZN A;  1V3B A;  1C5K A;  2IAT A;  2BER A;  1IVF A;  2F10 A;  3Q6P A;  2IAR A;  2VAQ A;  4Q1U A;  3G4E A;  3ZGD A;  4K1H A;  5JYY A;  4GNC A;  3KYA A;  1VCU A;  4HHQ A;  4C1Y B;  4MX0 A;  1NCD N;  4X4A A;  1MS0 A;  4R40 A;  1OFZ A;  2XCY A;  1CVM A;  1SLI A;  2ZW9 A;  1E8V A;  4WEF A;  1W8N A;  4XJW A;  1CQ1 A;  1MS8 A;  4MWU A;  3FW0 A;  4XHB A;  3VNG A;  1IVC A;  2YA4 A;  2HTR A;  1RWL A;  4K1J A;  3JU4 A;  1EUR A;  4YY8 A;  4B7R A;  1XOG A;  4G3N A;  2DG1 A;  4GN8 A;  4FPG A;  5GX5 A;  3G4H A;  2IAU A;  2AH2 A;  5D9C A;  3GVL A;  3SIL A;  4MWJ A;  5GX1 A;  4XIO A;  1SLL A;  1N1Y A;  3O9K A;  1Z4Z A;  4GNB A;  4MJV A;  3B7E A;  3LI5 A;  1NSC A;  4IMB A;  4HZZ A;  4KS2 A;  1B9S A;  3HLI A;  4K1K A;  1NN2 A;  4XMA A;  3NSS A;  4IFJ A;  4DGR A;  4YZ2 A;  2GVU A;  2C4L A;  2QWD A;  2BF6 A;  3VNH A;  3K37 A;  4X47 A;  4XJ8 A;  1V0F A;  2ISM A;  4CHB A;  1IUB A;  2VSM A;  4GZQ A;  1F8B A;  2VK6 A;  4FP3 A;  3NN9 A;  4B7M A;  1E8T A;  1BJI A;  4AGI A;  6NN9 A;  4JF7 A;  1USX A;  4UOU A;  2YDP A;  1F8D A;  3ZGC A;  4MWL A;  5HUK A;  2DG0 A;  4YW2 A;  5GTQ A;  3WN7 A;  4DG6 A;  2HTU A;  4YW4 A;  4IQK A;  2QE8 A;  1EUS A;  1N1S A;  2XN4 A;  5F72 C;  3L6V A;  1CRZ A;  1N1V A;  3S8Z A;  4NN9 A;  2XZJ A;  1INH A;  3O9J A;  5FNR A;  3TI3 A;  4FOW A;  1MZ6 A;  3K36 A;  4GZO A;  4XJR A;  4FZH A;  3Q6K A;  1MR5 A;  4K1I A;  3H72 A;  4MWV A;  4H53 A;  4QN4 A;  3LI3 A;  3TI5 A;  1N1T A;  4FPO B;  1SO7 A;  3UC1 A;  1ZI0 A;  1V3D A;  1U6D X;  3A9G A;  1A14 N;  3GVJ A;  3INB A;  2F29 A;  4N1B A;  4D8S A;  4FJ6 A;  4FP2 A;  4FPL A;  4QNP A;  3TI4 A;  3ALW A;  1IUC A;  4Q6K A;  4WA4 A;  4QN3 A;  4KS4 A;  1PJX A;  4QN6 A;  1NNC A;  4D52 C;  2FLU X;  2VPJ A;  1W1X A;  1B9V A;  1W20 A;  1W0P A;  1USR A;  2V91 A;  4M3M A;  1MZ5 A;  4FOQ A;  4MWY A;  2F11 A;  2SLI A;  1S0I A;  2QWF A;  5F9T A;  2SIM A;  2POO A;  3V1S A;  5B2D A;  2FP9 A;  5FNT A;  4IN4 A;  5FNQ A;  3LI4 A;  2QWI A;  4CSD A;  1ING A;  3DR2 A;  4A0P A;  2F12 A;  4FPY A;  4JML A;  3Q6T A;  2QWG A;  1MS5 A;  5FZJ A;  1WCS A;  4FPK A;  4FOV A;  4GZT A;  4CH9 A;  5EO7 A;  4KS5 A;  3TIC A;  4O5S A;  2QWJ A;  1NSD A;  3TIA A;  4XHX A;  3AMS A;  2ZWA A;  4C1Y A;  3KGG A;  1E8U A;  4I00 A;  3H73 A;  3CKZ A;  1IVE A;  4GB1 A;  4SLI A;  2JKB A;  4HIZ A;  2AGS A;  3ADE A;  4B7Q A;  2OJH A;  2HT7 A;  5GX3 A;  4IFL X;  3SOB B;  1C9U A;  4D52 B;  3SAL A;  2CML A;  5HUG A;  3B69 A;  2W8B B;  3CYE A;  1IVD A;  4J9T A;  4FPC A;  5EO8 A;  1W8O A;  2HQS A;  5GX4 A;  4XIK A;  3IAX A;  2IAS A;  4YZ1 A;  3P5B L;  1F8E A;  2P4O A;  4WA3 A;  4CPN A;  1V04 A;  2FP8 A;  4HZW A;  3ALX A;  3SOV A;  2C4A A;  1NPE A;  1NCC N;  4GZW A;  2YA5 A;  1N6F A;  2HT8 A;  4MJU A;  3W09 A;  2HTQ A;  1IVG A;  2YA8 A;  4FPE A;  1V3C A;  2ZB5 A;  2GVV A;  4CPY A;  2YDT A;  4M4N A;  1IVB A;  4HZX A;  3O4P A;  4FPJ A;  4HZV A;  2XZI A;  4ASC A;  3SAN A;  2QWC A;  2IAP A;  3K38 A;  2QWH A;  5H47 A;  4H52 A;  2F28 A;  1S1D A;  3DAS A;  2SIL A;  4MWX A;  2W5O A;  4O5T A;  3S8V A;  2YA7 A;  4KS3 A;  1KIT A;  3PJQ A;  3GVK A;  2DSO A;  2AEQ A;  4PWZ A;  1SUU A;  1INV A;  2VK5 A;  1X2R A;  5M1Z A;  2GVX A;  3NO0 A;  4NCS A;  5CGJ A;  4AGT A;  1L7F A;  1E1A A;  3WWA A;  3AMR A;  4FQ4 A;  7NN9 A;  2IAO A;  1VCJ A;  5FNS A;  1V0Z A;  4YW3 A;  1MS1 A;  2HT5 A;  3I1C A;  1Z50 A;  1ZGK A;  4GNA A;  1N6E A;  4GDJ A;  4MWR A;  1V0E A;  2RKC A;  1V3E A;  1MS9 A;  4QN5 A;  5GX2 A;  1Z4V A;  4L7C A;  3D11 A;  3H71 A;  1Z4X A;  4ZY3 A;  4HHO A;  3SOQ A;  4X6K A;  1QBI A;  4GJT A;  1INF A;  1CRU A;  1NCB N;  5FWW A;  1IJQ A;  2VW2 A;  3BEQ A;  1B9T A;  4MC7 A;  2IAX A;  2F24 A;  4HW6 A;  4HZY A;  1WP5 A;  2F26 A;  2DYH A;  1Z4Y A;  2IAV A;  2XZK A;  2H2N A;  4IFN X;  3S94 A;  1QLG A;  1SNT A;  3BYC A;  2VW0 A;  4B7J A;  4XJA A;  5HX0 A;  3OPZ A;  4YW1 A;  1MWE A;  4CPZ A;  4CPM A;  1V2I A;  1MS3 A;  5HUM A;  1WCQ A;  4B7N A;  4XYX A;  1XOE A;  2W38 A;  1NSB A;  4WA5 A;  4YZ5 A;  4MZE A;  4X49 A;  4FVK A;  3SRG A;  4M4U A;  3CL2 A;  2GVW A;  2IAQ A;  2F27 A;  1A4Q A;  4XJU A;  4L7B A;  1DIL A;  3TI6 A;  3TIB A;  5B2C A;  1DIM A;  1INY A;  3FVZ A;  1N6D A;  4MZA A;  4XMB A;  1MS4 A;  1NNA A;  3SRE A;  4D52 A;  4UF7 A;  2W8B A;  2B8H A;  2HTV A;  1S0J A;  3T1E A;  2HTW A;  3K39 A;  2F25 A;  2FPB A;  4YZ3 A;  4YW5 A;  2WOZ A;  4MWW A;  4XJQ A;  3S2K A;  1H6L A;  3HRP A;  1Q7F A;  1L7G A;  5EX7 A;  2HU4 A;  3HLH A;  3TC9 A;  1Z4W A;  2QWB A;  4K3Y A;  3E5Z A;  3V65 B;  2VSK A;  1F8C A;  3WW9 A;  3TI8 A;  3K3A A;  1S18 A;  4KS1 A;  2ZB6 A;  5FNU A;  1W21 A;  1NNB A;  1A4G A;  4MWQ A;  5D9D A;  4CPO A;  4XJ9 A;  2QWE A;  2BAT A;  2VVZ A;  2YA6 A;  2A75 A;  2F0Z A;  3SLI A;  2AEP A;  3D12 A;  4FPF A;  2ZZK A;  1NMA N;  1RWI A;  2HTY A;  1L7H A;  3U0S A;  4XE9 A;  4YZ4 A;  1POO A;  2BZD A;  3II7 A;  1K32 A;  4GZX A;  4XOG A;  3WDZ A;  2VW1 A;  2Z32 A;  4GZP A;  5HUN A;  4ZGC A;  1EUU A;  2IAW A;  4GN9 A;  2GHS A;  4NC5 A;  4CPL A;  1INW A;  1NMB N;  4XMI A;  2W20 A;  3A71 A;  2QWA A;  3H6J A;  2IVZ A;  1N7D A;  5NN9 A;  5D9B A;  4M4V A;  4ZLR A;  4GZS A;  2FPC A;  1NCA N;  4FPH A;  2QWK A;  3V64 C;  1NMC A;  4WEG A;  4L7D A;  4AH4 A;  4IYG A;  2W5N A;  2X9M A;  2FHR A;  2G8S A;  4XIL A;  4QN7 A;  2HU0 A;  1EUT A;  4FOY A;  4GN7 A;  2H2U A;  4XJZ A;  1INX A;  1X2J A;  3A9H A;  4BBW A;  1W0O A;  4GDI A; 
#chains in the Genus database with same CATH homology
 4C1Y A;  4AHA A;  1IUB A;  4UOU A;  1IUC A;  4AH4 A;  5EO7 A;  4D52 A;  4D52 B;  4AGI A;  4D4U A;  4CSD A;  5EO8 A;  1OFZ A;  4AGT A;  4C1Y B;  5H47 A;  4D52 C;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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4AHAA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations