4ZY3A

Crystal structure of keap1 in complex with a small chemical compound, k67
Total Genus 67

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
285
structure length
285
Chain Sequence
GRLIYTAGGYFRQSLSYLEAYNPSNGSWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCIHHSSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITPMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMRHHRSALGITVHQGKIYVLGGYDGHTFLDSVECYDPDSDTWSEVTRMTSGRSGVGVAVT

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transcription
source organism Mus musculus
publication title p62/Sqstm1 promotes malignancy of HCV-positive hepatocellular carcinoma through Nrf2-dependent metabolic reprogramming
pubmed doi rcsb
molecule keywords Kelch-like ECH-associated protein 1
total genus 67
structure length 285
sequence length 285
chains with identical sequence B
ec nomenclature
pdb deposition date 2015-05-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01344 Kelch_1 Kelch motif
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.120.10.80 Mainly Beta 6 Propeller Neuraminidase Kelch-type beta propeller 4zy3A00
3VNHA 4IFLX 4IFJA 4L7DA 5FZJA 4ASCA 2FLUX 2WOZA 2XN4A 5FZNA 2ZWAA 1X2JA 1U6DX 5FNSA 5F72C 4ZY3A 4ZGCA 3WDZA 5CGJA 1ZGKA 3WN7A 2VPJA 2DYHA 5FNRA 4CHBA 4YY8A 2Z32A 3ZGCA 2ZW9A 3ZGDA 5FNUA 4L7CA 4IQKA 4L7BA 2ZZKA 5FNQA 4IN4A 3VNGA 3ADEA 4XMBA 4IFNX 4N1BA 4CH9A 5FNTA 1X2RA 3II7A
chains in the Genus database with same CATH superfamily
3H73A 1C9UA 3NO0A 1RWIA 4XIOA 4QN4A 1V3DA 1INHA 4CPOA 3HRPA 4XJRA 3SLIA 2IATA 5CGJA 6NN9A 3E5ZA 3H72A 2IAOA 1WP5A 1ZI0A 3D12A 4XMIA 2Z32A 4K1IA 3K37A 4XIKA 3Q6KA 1CRUA 1N6EA 3SOVA 4IMBA 3V1SA 2HTYA 1Z4YA 4KS5A 4D8SA 3G4EA 1IVGA 4BBWA 2AGSA 2W38A 2W8BB 1KITA 1NPEA 3FW0A 2C4LA 4GZWA 3SOBB 1SLIA 1V0EA 2FP9A 4CPYA 1V0FA 4MWWA 1EUTA 2OJHA 4FQ4A 1W8NA 4YZ5A 2SLIA 2DYHA 3B69A 2QWGA 4GN9A 5D9CA 2XZIA 3H71A 1S18A 4D52A 4IN4A 4K1JA 4QN7A 2QE8A 4D52C 4B7RA 4IFNX 5F9TA 3TI4A 1MWEA 2IAPA 4IFJA 1W21A 2VW0A 3IAXA 1EURA 1NCDN 1N7DA 1NCCN 2QWDA 2VSKA 2F28A 1INFA 1N1TA 3TICA 2VPJA 1XOEA 1VCJA 5HUGA 2VSMA 2HU0A 4HW6A 2BERA 4YW5A 4L7CA 2ZZKA 4H53A 3A72A 4CPNA 4YZ1A 5B2CA 4N1BA 3HLIA 4X6KA 4L7DA 2IAXA 4MJVA 2QWAA 2ZWAA 1F8EA 2VAQA 4GN7A 2FP8A 4MWXA 1MZ5A 1F8CA 3SRGA 4MX0A 2FHRA 1INWA 1B9SA 3ALWA 4HZZA 1NNBA 3ALXA 5D9BA 4DG6A 1L7HA 1N1SA 2HTUA 4B7QA 4NN9A 1L7GA 3V65B 1W0OA 1F8BA 2XZJA 4JF7A 1INVA 2BZDA 1MS8A 2AH2A 2F24A 2YA7A 4D4UA 3BYCA 2VVZA 4X49A 4M4NA 2HT7A 1NCAN 2F26A 3Q6PA 3K38A 5FNSA 3AMSA 2GVXA 4ZY3A 5GX5A 1ZGKA 4YW2A 2F12A 4FJ6A 4YW4A 4GNCA 2VW1A 3TIBA 3WWAA 4XYXA 3NSSA 4KS3A 1CRZA 1BJIA 3GVKA 4YZ4A 1Z4WA 4MZAA 3SALA 3VNGA 3LI3A 4FZHA 4AHAA 4C1YB 2XN4A 4MWQA 2IAVA 4MWUA 1EUUA 2IAQA 4MC7A 4XJ8A 3B7EA 4GZPA 1F8DA 4FPJA 1WCSA 2F10A 1IJQA 5F72C 1V3EA 1Z50A 1CQ1A 1SNTA 3WDZA 3K39A 2HT8A 4XMAA 3CL2A 3G4HA 4J9TA 3OPZA 1QLGA 4FPLA 4M4UA 3SOQA 3ZGCA 4YY8A 3KGGA 3SANA 2F0ZA 3CL0A 4Q1UA 4GNBA 3ADEA 3K3AA 5FNTA 2FPBA 1X2RA 2GHSA 2QWKA 1IVEA 1INYA 4IFLX 4CPMA 4MWJA 4ASCA 1SUUA 2F25A 2W5OA 4O5SA 4HZVA 4YW1A 3TI8A 2QWBA 4G3NA 4GJTA 1N1VA 3S8VA 3CYEA 2DSOA 1L7FA 4CHBA 4FPOB 4I00A 4UOUA 1V3BA 3O9KA 1USXA 4FPGA 2H2UA 3W09A 2AEQA 4QNPA 1INXA 3SREA 2BF6A 4R40A 4X47A 5H47A 2QWJA 3UC1A 1EUSA 1WCQA 1K32A 2F27A 2IARA 2WOZA 1IVDA 4GZOA 5EX7A 1E8UA 1XOGA 2A75A 1U6DX 3S8ZA 4M4VA 2YA8A 2QWIA 5HUNA 3AMRA 5GTQA 3U0SA 5GX1A 4NCSA 1IUBA 1DIMA 3BEQA 3DR2A 1N6DA 4JMLA 1NSBA 3INBA 1B9TA 3II7A 1PJXA 5JYYA 5GX2A 2ZB6A 4GB1A 4AH4A 2C4AA 3NN9A 2QWHA 4FPEA 1MS5A 5B2DA 4YZ3A 2ZW9A 4A0PA 3ZGDA 7NN9A 4YW3A 4L7BA 2QWEA 4HZXA 5GX4A 1DILA 5M1ZA 1A4QA 4CPLA 1NNCA 2W8BA 4XHBA 5FWWA 5HUMA 4CSDA 1W20A 4QN3A 4B7JA 2VW2A 2VK6A 3SILA 2HTRA 4XJ9A 1IVBA 2XCYA 4NC5A 5D9DA 4XJQA 3TC9A 5FNUA 1RWLA 4MZEA 4AGTA 4KS1A 4H52A 4GZXA 4D52B 1W0PA 1A14N 4CH9A 1NMAN 1A4GA 4MJUA 5FZJA 1NCBN 3S2KA 2FLUX 4HHQA 4FPKA 4M3MA 2IVZA 1E8TA 4WA4A 2YDTA 5NN9A 4MWVA 1S0JA 1MS0A 4CPZA 3TI6A 3CKZA 3O9JA 4O5TA 1NNAA 2RKCA 2GVVA 4YZ2A 1V04A 4WEGA 3JU4A 4FPFA 4XE9A 4FOWA 4KS2A 4QN5A 4FPHA 4HHOA 1NMCA 3GVJA 2HTWA 4FVKA 3H6JA 2YA6A 3WW9A 1MS1A 4WA3A 2YA4A 3T1EA 5HUKA 2CMLA 2F29A 2G8SA 4AGIA 1V0ZA 5EO7A 4XOGA 2HU4A 1E8VA 4XHXA 2GVUA 2FPCA 1N1YA 1NMBN 4XJUA 5HX0A 4GNAA 1USRA 3TI3A 3V64C 1MR5A 2ZB5A 4FP2A 1IVFA 2F11A 1INGA 4HZWA 5FZNA 4K1KA 2IASA 4GN8A 1Q7FA 2HTQA 1Z4ZA 2VK7A 1W1XA 2P4OA 2IAUA 4GZQA 1Z4VA 4GZSA 4HIZA 3P5BL 5FNQA 4B7NA 1MS4A 2X9MA 3VNHA 1B9VA 2SILA 3DASA 4ZLRA 3D11A 1POOA 3FVZA 4C1YA 3K36A 4FOQA 5EO8A 1H6LA 4Q6KA 4SLIA 3O4PA 1IUCA 4XILA 2HQSA 4ZGCA 4GZTA 3L6VA 2W5NA 4GEZA 2VK5A 3TIAA 1NN2A 2BATA 4GDJA 4IYGA 4FP3A 3LI4A 4WA5A 4HZYA 4GDIA 2DG1A 4PWZA 1S0IA 3A71A 3A9HA 2JKBA 3HLHA 4FOVA 1S1DA 3I1CA 2F13A 4FOYA 3S94A 2GVWA 1X2JA 2HT5A 2V91A 4FPCA 1IVCA 2VWDA 3PJQA 3GVLA 2XZKA 4WEFA 1CVMA 1QBIA 1VCUA 3A9GA 4XJAA 4UF7A 1NSDA 4MWRA 2YDPA 3Q6TA 4MWYA 2QWFA 1E1AA 4XMBA 1MS9A 4XJWA 2W20A 5GX3A 4KS4A 1NSCA 2QWCA 2AEPA 4X4AA 2ISMA 4DGRA 1W8OA 2DG0A 4K1HA 2H2NA 3TI5A 2POOA 2YA5A 1Z4XA 2B8HA 4FPYA 3LI5A 3WN7A 4XJZA 1N6FA 5FNRA 4MWLA 1C5KA 4QN6A 4K3YA 1V3CA 4B7MA 1MS3A 4IQKA 1OFZA 1SLLA 2IAWA 1MZ6A 2HTVA 1SO7A 1V2IA 2SIMA 3KYAA
chains in the Genus database with same CATH topology
3VNHA 4IFLX 4IFJA 4L7DA 5FZJA 4ASCA 2FLUX 2WOZA 2XN4A 5FZNA 2ZWAA 1X2JA 1U6DX 5FNSA 5F72C 4ZY3A 4ZGCA 3WDZA 5CGJA 1ZGKA 3WN7A 2VPJA 2DYHA 5FNRA 4CHBA 4YY8A 2Z32A 3ZGCA 2ZW9A 3ZGDA 5FNUA 4L7CA 4IQKA 4L7BA 2ZZKA 5FNQA 4IN4A 3VNGA 3ADEA 4XMBA 4IFNX 4N1BA 4CH9A 5FNTA 1X2RA 3II7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3VNH A;  4IFL X;  4IFJ A;  4L7D A;  5FZJ A;  4ASC A;  2FLU X;  2WOZ A;  2XN4 A;  5FZN A;  2ZWA A;  1X2J A;  1U6D X;  5FNS A;  5F72 C;  4ZY3 A;  4ZGC A;  3WDZ A;  5CGJ A;  1ZGK A;  3WN7 A;  2VPJ A;  2DYH A;  5FNR A;  4CHB A;  4YY8 A;  2Z32 A;  3ZGC A;  2ZW9 A;  3ZGD A;  5FNU A;  4L7C A;  4IQK A;  4L7B A;  2ZZK A;  5FNQ A;  4IN4 A;  3VNG A;  3ADE A;  4XMB A;  4IFN X;  4N1B A;  4CH9 A;  5FNT A;  1X2R A;  3II7 A; 
#chains in the Genus database with same CATH topology
 3H73 A;  1C9U A;  3NO0 A;  1RWI A;  4XIO A;  4QN4 A;  1V3D A;  1INH A;  4CPO A;  3HRP A;  4XJR A;  3SLI A;  2IAT A;  5CGJ A;  6NN9 A;  3E5Z A;  3H72 A;  2IAO A;  1WP5 A;  1ZI0 A;  3D12 A;  4XMI A;  2Z32 A;  4K1I A;  3K37 A;  4XIK A;  3Q6K A;  1CRU A;  1N6E A;  3SOV A;  4IMB A;  3V1S A;  2HTY A;  1Z4Y A;  4KS5 A;  4D8S A;  3G4E A;  1IVG A;  4BBW A;  2AGS A;  2W38 A;  2W8B B;  1KIT A;  1NPE A;  3FW0 A;  2C4L A;  4GZW A;  3SOB B;  1SLI A;  1V0E A;  2FP9 A;  4CPY A;  1V0F A;  4MWW A;  1EUT A;  2OJH A;  4FQ4 A;  1W8N A;  4YZ5 A;  2SLI A;  2DYH A;  3B69 A;  2QWG A;  4GN9 A;  5D9C A;  2XZI A;  3H71 A;  1S18 A;  4D52 A;  4IN4 A;  4K1J A;  4QN7 A;  2QE8 A;  4D52 C;  4B7R A;  4IFN X;  5F9T A;  3TI4 A;  1MWE A;  2IAP A;  4IFJ A;  1W21 A;  2VW0 A;  3IAX A;  1EUR A;  1NCD N;  1N7D A;  1NCC N;  2QWD A;  2VSK A;  2F28 A;  1INF A;  1N1T A;  3TIC A;  2VPJ A;  1XOE A;  1VCJ A;  5HUG A;  2VSM A;  2HU0 A;  4HW6 A;  2BER A;  4YW5 A;  4L7C A;  2ZZK A;  4H53 A;  3A72 A;  4CPN A;  4YZ1 A;  5B2C A;  4N1B A;  3HLI A;  4X6K A;  4L7D A;  2IAX A;  4MJV A;  2QWA A;  2ZWA A;  1F8E A;  2VAQ A;  4GN7 A;  2FP8 A;  4MWX A;  1MZ5 A;  1F8C A;  3SRG A;  4MX0 A;  2FHR A;  1INW A;  1B9S A;  3ALW A;  4HZZ A;  1NNB A;  3ALX A;  5D9B A;  4DG6 A;  1L7H A;  1N1S A;  2HTU A;  4B7Q A;  4NN9 A;  1L7G A;  3V65 B;  1W0O A;  1F8B A;  2XZJ A;  4JF7 A;  1INV A;  2BZD A;  1MS8 A;  2AH2 A;  2F24 A;  2YA7 A;  4D4U A;  3BYC A;  2VVZ A;  4X49 A;  4M4N A;  2HT7 A;  1NCA N;  2F26 A;  3Q6P A;  3K38 A;  5FNS A;  3AMS A;  2GVX A;  4ZY3 A;  5GX5 A;  1ZGK A;  4YW2 A;  2F12 A;  4FJ6 A;  4YW4 A;  4GNC A;  2VW1 A;  3TIB A;  3WWA A;  4XYX A;  3NSS A;  4KS3 A;  1CRZ A;  1BJI A;  3GVK A;  4YZ4 A;  1Z4W A;  4MZA A;  3SAL A;  3VNG A;  3LI3 A;  4FZH A;  4AHA A;  4C1Y B;  2XN4 A;  4MWQ A;  2IAV A;  4MWU A;  1EUU A;  2IAQ A;  4MC7 A;  4XJ8 A;  3B7E A;  4GZP A;  1F8D A;  4FPJ A;  1WCS A;  2F10 A;  1IJQ A;  5F72 C;  1V3E A;  1Z50 A;  1CQ1 A;  1SNT A;  3WDZ A;  3K39 A;  2HT8 A;  4XMA A;  3CL2 A;  3G4H A;  4J9T A;  3OPZ A;  1QLG A;  4FPL A;  4M4U A;  3SOQ A;  3ZGC A;  4YY8 A;  3KGG A;  3SAN A;  2F0Z A;  3CL0 A;  4Q1U A;  4GNB A;  3ADE A;  3K3A A;  5FNT A;  2FPB A;  1X2R A;  2GHS A;  2QWK A;  1IVE A;  1INY A;  4IFL X;  4CPM A;  4MWJ A;  4ASC A;  1SUU A;  2F25 A;  2W5O A;  4O5S A;  4HZV A;  4YW1 A;  3TI8 A;  2QWB A;  4G3N A;  4GJT A;  1N1V A;  3S8V A;  3CYE A;  2DSO A;  1L7F A;  4CHB A;  4FPO B;  4I00 A;  4UOU A;  1V3B A;  3O9K A;  1USX A;  4FPG A;  2H2U A;  3W09 A;  2AEQ A;  4QNP A;  1INX A;  3SRE A;  2BF6 A;  4R40 A;  4X47 A;  5H47 A;  2QWJ A;  3UC1 A;  1EUS A;  1WCQ A;  1K32 A;  2F27 A;  2IAR A;  2WOZ A;  1IVD A;  4GZO A;  5EX7 A;  1E8U A;  1XOG A;  2A75 A;  1U6D X;  3S8Z A;  4M4V A;  2YA8 A;  2QWI A;  5HUN A;  3AMR A;  5GTQ A;  3U0S A;  5GX1 A;  4NCS A;  1IUB A;  1DIM A;  3BEQ A;  3DR2 A;  1N6D A;  4JML A;  1NSB A;  3INB A;  1B9T A;  3II7 A;  1PJX A;  5JYY A;  5GX2 A;  2ZB6 A;  4GB1 A;  4AH4 A;  2C4A A;  3NN9 A;  2QWH A;  4FPE A;  1MS5 A;  5B2D A;  4YZ3 A;  2ZW9 A;  4A0P A;  3ZGD A;  7NN9 A;  4YW3 A;  4L7B A;  2QWE A;  4HZX A;  5GX4 A;  1DIL A;  5M1Z A;  1A4Q A;  4CPL A;  1NNC A;  2W8B A;  4XHB A;  5FWW A;  5HUM A;  4CSD A;  1W20 A;  4QN3 A;  4B7J A;  2VW2 A;  2VK6 A;  3SIL A;  2HTR A;  4XJ9 A;  1IVB A;  2XCY A;  4NC5 A;  5D9D A;  4XJQ A;  3TC9 A;  5FNU A;  1RWL A;  4MZE A;  4AGT A;  4KS1 A;  4H52 A;  4GZX A;  4D52 B;  1W0P A;  1A14 N;  4CH9 A;  1NMA N;  1A4G A;  4MJU A;  5FZJ A;  1NCB N;  3S2K A;  2FLU X;  4HHQ A;  4FPK A;  4M3M A;  2IVZ A;  1E8T A;  4WA4 A;  2YDT A;  5NN9 A;  4MWV A;  1S0J A;  1MS0 A;  4CPZ A;  3TI6 A;  3CKZ A;  3O9J A;  4O5T A;  1NNA A;  2RKC A;  2GVV A;  4YZ2 A;  1V04 A;  4WEG A;  3JU4 A;  4FPF A;  4XE9 A;  4FOW A;  4KS2 A;  4QN5 A;  4FPH A;  4HHO A;  1NMC A;  3GVJ A;  2HTW A;  4FVK A;  3H6J A;  2YA6 A;  3WW9 A;  1MS1 A;  4WA3 A;  2YA4 A;  3T1E A;  5HUK A;  2CML A;  2F29 A;  2G8S A;  4AGI A;  1V0Z A;  5EO7 A;  4XOG A;  2HU4 A;  1E8V A;  4XHX A;  2GVU A;  2FPC A;  1N1Y A;  1NMB N;  4XJU A;  5HX0 A;  4GNA A;  1USR A;  3TI3 A;  3V64 C;  1MR5 A;  2ZB5 A;  4FP2 A;  1IVF A;  2F11 A;  1ING A;  4HZW A;  5FZN A;  4K1K A;  2IAS A;  4GN8 A;  1Q7F A;  2HTQ A;  1Z4Z A;  2VK7 A;  1W1X A;  2P4O A;  2IAU A;  4GZQ A;  1Z4V A;  4GZS A;  4HIZ A;  3P5B L;  5FNQ A;  4B7N A;  1MS4 A;  2X9M A;  3VNH A;  1B9V A;  2SIL A;  3DAS A;  4ZLR A;  3D11 A;  1POO A;  3FVZ A;  4C1Y A;  3K36 A;  4FOQ A;  5EO8 A;  1H6L A;  4Q6K A;  4SLI A;  3O4P A;  1IUC A;  4XIL A;  2HQS A;  4ZGC A;  4GZT A;  3L6V A;  2W5N A;  4GEZ A;  2VK5 A;  3TIA A;  1NN2 A;  2BAT A;  4GDJ A;  4IYG A;  4FP3 A;  3LI4 A;  4WA5 A;  4HZY A;  4GDI A;  2DG1 A;  4PWZ A;  1S0I A;  3A71 A;  3A9H A;  2JKB A;  3HLH A;  4FOV A;  1S1D A;  3I1C A;  2F13 A;  4FOY A;  3S94 A;  2GVW A;  1X2J A;  2HT5 A;  2V91 A;  4FPC A;  1IVC A;  2VWD A;  3PJQ A;  3GVL A;  2XZK A;  4WEF A;  1CVM A;  1QBI A;  1VCU A;  3A9G A;  4XJA A;  4UF7 A;  1NSD A;  4MWR A;  2YDP A;  3Q6T A;  4MWY A;  2QWF A;  1E1A A;  4XMB A;  1MS9 A;  4XJW A;  2W20 A;  5GX3 A;  4KS4 A;  1NSC A;  2QWC A;  2AEP A;  4X4A A;  2ISM A;  4DGR A;  1W8O A;  2DG0 A;  4K1H A;  2H2N A;  3TI5 A;  2POO A;  2YA5 A;  1Z4X A;  2B8H A;  4FPY A;  3LI5 A;  3WN7 A;  4XJZ A;  1N6F A;  5FNR A;  4MWL A;  1C5K A;  4QN6 A;  4K3Y A;  1V3C A;  4B7M A;  1MS3 A;  4IQK A;  1OFZ A;  1SLL A;  2IAW A;  1MZ6 A;  2HTV A;  1SO7 A;  1V2I A;  2SIM A;  3KYA A; 
#chains in the Genus database with same CATH homology
 3VNH A;  4IFL X;  4IFJ A;  4L7D A;  5FZJ A;  4ASC A;  2FLU X;  2WOZ A;  2XN4 A;  5FZN A;  2ZWA A;  1X2J A;  1U6D X;  5FNS A;  5F72 C;  4ZY3 A;  4ZGC A;  3WDZ A;  5CGJ A;  1ZGK A;  3WN7 A;  2VPJ A;  2DYH A;  5FNR A;  4CHB A;  4YY8 A;  2Z32 A;  3ZGC A;  2ZW9 A;  3ZGD A;  5FNU A;  4L7C A;  4IQK A;  4L7B A;  2ZZK A;  5FNQ A;  4IN4 A;  3VNG A;  3ADE A;  4XMB A;  4IFN X;  4N1B A;  4CH9 A;  5FNT A;  1X2R A;  3II7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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