1W07A

Arabidopsis thaliana acyl-coa oxidase 1
Total Genus 269
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
269
sequence length
658
structure length
655
Chain Sequence
EGIDHLADERNKAEFDVEDMKIVWAGSRHAFEVSDRIARLVASDPVFEKSNRARLSRKELFKSTLRKCAHAFKRIIELRLNEEEAGRLRHFIDQPAYVDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMKTVAQLGSGKVPVGTTAYMGRAAHLLQCRSGVQKAEDWLNPDVVLEAFEARALRMAVTCAKNLSKFENQEQGFQELLADLVEAAIAHCQLIVVSKFIAKLEQDIGGKGVKKQLNNLCYIYALYLLHKHLGDFLSTNCITPKQASLANDQLRSLYTQVRPNAVALVDAFNYTDHYLNSVLGRYDGNVYPKLFEEALKDPLNDSVVPDGYQEYLRPVLQQQL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Acyl-Coa Oxidase 1 from Arabidopsis Thaliana. Structure of a Key Enzyme in Plant Lipid Metabolism
pubmed doi rcsb
molecule tags Oxidoreductase
source organism Arabidopsis thaliana
molecule keywords ACYL-COA OXIDASE
total genus 269
structure length 655
sequence length 658
chains with identical sequence B
ec nomenclature ec 1.3.3.6: Acyl-CoA oxidase.
pdb deposition date 2004-06-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01756 ACOX Acyl-CoA oxidase
A PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain
A PF14749 Acyl-CoA_ox_N Acyl-coenzyme A oxidase N-terminal
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 1w07A01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 1w07A03
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 1w07A04
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 1w07A02
4O5MA 4ZYJA 3MMOA 2REHA 3BNHA 1QDBA 2A1TA 3NF4A 4G5EA 2YYMA 2FONA 4XVXA 3R7KA 1UKWA 1BUCA 3FCJA 2YYLA 4X28C 1FS7A 3MXLA 3MPJA 4Q17A 3GM6A 4L3YA 2JBTA 4L38A 3OIBA 1JQIA 3LG1A 3MPIA 3BNJA 2UXWA 5K3GA 2VR0A 1IS2A 4L1FA 2YYKA 3BNFA 4Q5BA 2IX5A 1UDYA 5K3JA 5K3HA 3F29A 4Q0TA 2RFQA 4Q5CA 3MKHA 4U83A 5K3IA 3D9FA 3L1TA 3X0YA 4WJYA 4KTOA 2D29A 3AFFA 3LGQA 1SIRA 2JIFA 4P13A 4W9UA 1OAHA 3UBRA 3MDEA 3RKHA 2Z1QA 1EGCA 1SIQA 2OT4A 3D1IA 2DVLA 2ZAFA 1EGDA 2CX9A 4JEKA 1T9GA 3P4TA 4OO2A 1GU6A 3HWCA 1RX0A 1WS9A 2EBAA 3B96A 3OWAA 2C0UA 4KCFA 2PG0A 2IX6A 4ZXVA 2J7AA 3AFEA 2WBIA 3GQTA 4L3XA 2ZO5A 2OR0A 3SCEA 1EGEA 2JBSA 4N5FA 3X0XA 4Q1OA 3TTBA 4IV6A 2DDHA 1U8VA 3M9VA 1W07A 1R2JA 3S7WA 2R0NA 3D6BA 3II9A 4NXLA 2C12A 2R0MA 2RF7A 3SXQA 2E80A 3TORA 4DOYA 3PFDA 4M9AA 2E81A 3BNGA 4RM7A 4HR3A 3UU9A 3D9EA 3GNCA 4L3ZA 3D9GA 4IRNA 2JBRA 2RDZA 2YYIA 1FS9A 3EOMA 3D9DA 3MDDA 2YYGA 3FO3A 3EONA 1FS8A 2YYJA 3SF6A 4Q4UA 1IVHA 3OWMA 3SWOA 4X28A 2VIGA
chains in the Genus database with same CATH superfamily
4O5MA 4ZYJA 1X91A 2CJ7A 3MMOA 4AKHA 4V25A 2REHA 2BU8A 2CJ8A 3BNHA 4J1VA 3Q0AA 1QDBA 1X90A 2XQRB 5B5VA 2A1TA 3NF4A 2PO4A 4G5EA 2YYMA 1R3BA 1XFUA 2FONA 4XVXA 1S26A 2XS8A 3R7KA 2HJNA 1UKWA 1BUCA 2Q8IA 3FCJA 4FF4A 2CJ4A 3CRLA 1K90A 1SC5A 1GKXA 2YYLA 3U33A 4X28C 1FS7A 4E00A 5J71A 1Y8PA 3MXLA 1RJ1A 3MPJA 4KS9A 4Q17A 3GM6A 4LQQB 1Y8NA 4L3YA 1RJ4A 2JBTA 2Q8GA 4L38A 4H81A 3OIBA 1JQIA 3LG1A 2BU5A 3TZ0A 3Q22A 3MPIA 3BNJA 4MP7A 2UXWA 4V26A 3CE2A 3TZ2A 5K3GA 3C2PA 5J6AA 3VKHA 2AO2A 2VR0A 1IS2A 4L1FA 5EZ3A 2FP1A 2YYKA 2XS1A 2ZDYA 5BRMA 4AKGA 3BNFA 4Q5BA 2IX5A 1UDYA 4MPEA 5K3JA 5K3HA 3F29A 2CJ5A 2CJ6A 2FP2A 2R03A 4H7QA 3D2RA 4Q0TA 3TZ5A 2RFQA 5M4NA 4Q5CA 2QR4A 3MKHA 2BU6A 4U83A 5K3IA 2OEVA 3D9FA 3L1TA 5GJVE 1GKZA 3X0YA 4WJYA 3C3LA 4KTOA 2D29A 3AFFA 3LGQA 4QICA 3X29A 4FF1A 1SIRA 2JIFA 1PI1A 4P13A 4W9UA 1OAHA 2EC5A 3UBRA 3MDEA 3RKHA 3VADA 2Z1QA 1XFWA 5B5WA 5M4PA 3VKGA 1EGCA 1SIQA 2VF1A 2R05A 1SK6A 2OT4A 2YGWA 4LQSB 3D1IA 2DVLA 5BRKA 1GJVA 2ZAFA 2E0AA 4FZ4A 3Q24A 1EGDA 4JIOA 2BU2A 2ZKJA 2CX9A 1XFXA 4JEKA 1T9GA 3P4TA 4OO2A 1GU6A 2EBHX 3HWCA 2LFWA 4KSFA 1RX0A 5M4MA 4JIZA 1WS9A 2EBAA 3B96A 3OWAA 2C0UA 4KCFA 2R02A 2PG0A 2IX6A 2OEXA 3KMLA 4ZXVA 1XFVA 2J7AA 3AFEA 2WBIA 3GQTA 4HKRA 4HKSA 2ZO5A 4L3XA 2OR0A 3SCEA 3TZ4A 4E01A 1EGEA 2Q8HA 4KSAA 1PK0A 5GJWE 3CRKA 2JBSA 4N5FA 3X0XA 1RP3A 4Q1OA 5B6BA 5M4KA 2PNRA 2BU7A 3C46A 3TTBA 4IV6A 2DDHA 1U8VA 2F6LA 3M9VA 1W07A 1R2JA 4MPNA 2R0NA 3D6BA 3II9A 4NXLA 4P79A 3S7WA 2C12A 2ZDXA 1XFYA 2R0MA 4H85A 2RF7A 1Y8OA 3SXQA 2E80A 1XFZA 4DOYA 3PFDA 4MP2A 3TORA 4F0XA 4M9AA 1LVCA 2E81A 3BNGA 4RM7A 4HR3A 3UU9A 2GBBA 2EBFX 2Q8FA 4FF2A 4E02A 3D9EA 3GNCA 1Y0VA 4L3ZA 3D9GA 4IRNA 1K93A 2OJQA 4AI6A 2JBRA 2RDZA 2BTZA 2YYIA 1XG2B 1FS9A 4MPCA 1JM6A 1X8ZA 3EOMA 3D9DA 3MDDA 2YYGA 3FO3A 3Q23A 4FF3A 3EONA 4G97A 1FS8A 2AZEA 2YYJA 1K8TA 4AKIA 3SF6A 4Q4UA 3DJLA 4DZYA 1IVHA 3N0RA 3OWMA 3SWOA 4X28A 2VIGA
chains in the Genus database with same CATH topology
4O5MA 4ZYJA 3MMOA 2REHA 3BNHA 1QDBA 2A1TA 3NF4A 4G5EA 2YYMA 2FONA 4XVXA 3R7KA 1UKWA 1BUCA 3FCJA 2YYLA 4X28C 1FS7A 3MXLA 3MPJA 4Q17A 3GM6A 4L3YA 2JBTA 4L38A 3OIBA 1JQIA 3LG1A 3MPIA 3BNJA 2UXWA 5K3GA 2VR0A 1IS2A 4L1FA 2YYKA 3BNFA 4Q5BA 2IX5A 1UDYA 5K3JA 5K3HA 3F29A 4Q0TA 2RFQA 4Q5CA 3MKHA 4U83A 5K3IA 3D9FA 3L1TA 3X0YA 4WJYA 4KTOA 2D29A 3AFFA 3LGQA 1SIRA 2JIFA 4P13A 4W9UA 1OAHA 3UBRA 3MDEA 3RKHA 2Z1QA 1EGCA 1SIQA 2OT4A 3D1IA 2DVLA 2ZAFA 1EGDA 2CX9A 4JEKA 1T9GA 3P4TA 4OO2A 1GU6A 3HWCA 1RX0A 1WS9A 2EBAA 3B96A 3OWAA 2C0UA 4KCFA 2PG0A 2IX6A 4ZXVA 2J7AA 3AFEA 2WBIA 3GQTA 4L3XA 2ZO5A 2OR0A 3SCEA 1EGEA 2JBSA 4N5FA 3X0XA 4Q1OA 3TTBA 4IV6A 2DDHA 1U8VA 3M9VA 1W07A 1R2JA 3S7WA 2R0NA 3D6BA 3II9A 4NXLA 2C12A 2R0MA 2RF7A 3SXQA 2E80A 3TORA 4DOYA 3PFDA 4M9AA 2E81A 3BNGA 4RM7A 4HR3A 3UU9A 3D9EA 3GNCA 4L3ZA 3D9GA 4IRNA 2JBRA 2RDZA 2YYIA 1FS9A 3EOMA 3D9DA 3MDDA 2YYGA 3FO3A 3EONA 1FS8A 2YYJA 3SF6A 4Q4UA 1IVHA 3OWMA 3SWOA 4X28A 2VIGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4O5M A;  4ZYJ A;  3MMO A;  2REH A;  3BNH A;  1QDB A;  2A1T A;  3NF4 A;  4G5E A;  2YYM A;  2FON A;  4XVX A;  3R7K A;  1UKW A;  1BUC A;  3FCJ A;  2YYL A;  4X28 C;  1FS7 A;  3MXL A;  3MPJ A;  4Q17 A;  3GM6 A;  4L3Y A;  2JBT A;  4L38 A;  3OIB A;  1JQI A;  3LG1 A;  3MPI A;  3BNJ A;  2UXW A;  5K3G A;  2VR0 A;  1IS2 A;  4L1F A;  2YYK A;  3BNF A;  4Q5B A;  2IX5 A;  1UDY A;  5K3J A;  5K3H A;  3F29 A;  4Q0T A;  2RFQ A;  4Q5C A;  3MKH A;  4U83 A;  5K3I A;  3D9F A;  3L1T A;  3X0Y A;  4WJY A;  4KTO A;  2D29 A;  3AFF A;  3LGQ A;  1SIR A;  2JIF A;  4P13 A;  4W9U A;  1OAH A;  3UBR A;  3MDE A;  3RKH A;  2Z1Q A;  1EGC A;  1SIQ A;  2OT4 A;  3D1I A;  2DVL A;  2ZAF A;  1EGD A;  2CX9 A;  4JEK A;  1T9G A;  3P4T A;  4OO2 A;  1GU6 A;  3HWC A;  1RX0 A;  1WS9 A;  2EBA A;  3B96 A;  3OWA A;  2C0U A;  4KCF A;  2PG0 A;  2IX6 A;  4ZXV A;  2J7A A;  3AFE A;  2WBI A;  3GQT A;  4L3X A;  2ZO5 A;  2OR0 A;  3SCE A;  1EGE A;  2JBS A;  4N5F A;  3X0X A;  4Q1O A;  3TTB A;  4IV6 A;  2DDH A;  1U8V A;  3M9V A;  1W07 A;  1R2J A;  3S7W A;  2R0N A;  3D6B A;  3II9 A;  4NXL A;  2C12 A;  2R0M A;  2RF7 A;  3SXQ A;  2E80 A;  3TOR A;  4DOY A;  3PFD A;  4M9A A;  2E81 A;  3BNG A;  4RM7 A;  4HR3 A;  3UU9 A;  3D9E A;  3GNC A;  4L3Z A;  3D9G A;  4IRN A;  2JBR A;  2RDZ A;  2YYI A;  1FS9 A;  3EOM A;  3D9D A;  3MDD A;  2YYG A;  3FO3 A;  3EON A;  1FS8 A;  2YYJ A;  3SF6 A;  4Q4U A;  1IVH A;  3OWM A;  3SWO A;  4X28 A;  2VIG A; 
#chains in the Genus database with same CATH topology
 4O5M A;  4ZYJ A;  1X91 A;  2CJ7 A;  3MMO A;  4AKH A;  4V25 A;  2REH A;  2BU8 A;  2CJ8 A;  3BNH A;  4J1V A;  3Q0A A;  1QDB A;  1X90 A;  2XQR B;  5B5V A;  2A1T A;  3NF4 A;  2PO4 A;  4G5E A;  2YYM A;  1R3B A;  1XFU A;  2FON A;  4XVX A;  1S26 A;  2XS8 A;  3R7K A;  2HJN A;  1UKW A;  1BUC A;  2Q8I A;  3FCJ A;  4FF4 A;  2CJ4 A;  3CRL A;  1K90 A;  1SC5 A;  1GKX A;  2YYL A;  3U33 A;  4X28 C;  1FS7 A;  4E00 A;  5J71 A;  1Y8P A;  3MXL A;  1RJ1 A;  3MPJ A;  4KS9 A;  4Q17 A;  3GM6 A;  4LQQ B;  1Y8N A;  4L3Y A;  1RJ4 A;  2JBT A;  2Q8G A;  4L38 A;  4H81 A;  3OIB A;  1JQI A;  3LG1 A;  2BU5 A;  3TZ0 A;  3Q22 A;  3MPI A;  3BNJ A;  4MP7 A;  2UXW A;  4V26 A;  3CE2 A;  3TZ2 A;  5K3G A;  3C2P A;  5J6A A;  3VKH A;  2AO2 A;  2VR0 A;  1IS2 A;  4L1F A;  5EZ3 A;  2FP1 A;  2YYK A;  2XS1 A;  2ZDY A;  5BRM A;  4AKG A;  3BNF A;  4Q5B A;  2IX5 A;  1UDY A;  4MPE A;  5K3J A;  5K3H A;  3F29 A;  2CJ5 A;  2CJ6 A;  2FP2 A;  2R03 A;  4H7Q A;  3D2R A;  4Q0T A;  3TZ5 A;  2RFQ A;  5M4N A;  4Q5C A;  2QR4 A;  3MKH A;  2BU6 A;  4U83 A;  5K3I A;  2OEV A;  3D9F A;  3L1T A;  5GJV E;  1GKZ A;  3X0Y A;  4WJY A;  3C3L A;  4KTO A;  2D29 A;  3AFF A;  3LGQ A;  4QIC A;  3X29 A;  4FF1 A;  1SIR A;  2JIF A;  1PI1 A;  4P13 A;  4W9U A;  1OAH A;  2EC5 A;  3UBR A;  3MDE A;  3RKH A;  3VAD A;  2Z1Q A;  1XFW A;  5B5W A;  5M4P A;  3VKG A;  1EGC A;  1SIQ A;  2VF1 A;  2R05 A;  1SK6 A;  2OT4 A;  2YGW A;  4LQS B;  3D1I A;  2DVL A;  5BRK A;  1GJV A;  2ZAF A;  2E0A A;  4FZ4 A;  3Q24 A;  1EGD A;  4JIO A;  2BU2 A;  2ZKJ A;  2CX9 A;  1XFX A;  4JEK A;  1T9G A;  3P4T A;  4OO2 A;  1GU6 A;  2EBH X;  3HWC A;  2LFW A;  4KSF A;  1RX0 A;  5M4M A;  4JIZ A;  1WS9 A;  2EBA A;  3B96 A;  3OWA A;  2C0U A;  4KCF A;  2R02 A;  2PG0 A;  2IX6 A;  2OEX A;  3KML A;  4ZXV A;  1XFV A;  2J7A A;  3AFE A;  2WBI A;  3GQT A;  4HKR A;  4HKS A;  2ZO5 A;  4L3X A;  2OR0 A;  3SCE A;  3TZ4 A;  4E01 A;  1EGE A;  2Q8H A;  4KSA A;  1PK0 A;  5GJW E;  3CRK A;  2JBS A;  4N5F A;  3X0X A;  1RP3 A;  4Q1O A;  5B6B A;  5M4K A;  2PNR A;  2BU7 A;  3C46 A;  3TTB A;  4IV6 A;  2DDH A;  1U8V A;  2F6L A;  3M9V A;  1W07 A;  1R2J A;  4MPN A;  2R0N A;  3D6B A;  3II9 A;  4NXL A;  4P79 A;  3S7W A;  2C12 A;  2ZDX A;  1XFY A;  2R0M A;  4H85 A;  2RF7 A;  1Y8O A;  3SXQ A;  2E80 A;  1XFZ A;  4DOY A;  3PFD A;  4MP2 A;  3TOR A;  4F0X A;  4M9A A;  1LVC A;  2E81 A;  3BNG A;  4RM7 A;  4HR3 A;  3UU9 A;  2GBB A;  2EBF X;  2Q8F A;  4FF2 A;  4E02 A;  3D9E A;  3GNC A;  1Y0V A;  4L3Z A;  3D9G A;  4IRN A;  1K93 A;  2OJQ A;  4AI6 A;  2JBR A;  2RDZ A;  2BTZ A;  2YYI A;  1XG2 B;  1FS9 A;  4MPC A;  1JM6 A;  1X8Z A;  3EOM A;  3D9D A;  3MDD A;  2YYG A;  3FO3 A;  3Q23 A;  4FF3 A;  3EON A;  4G97 A;  1FS8 A;  2AZE A;  2YYJ A;  1K8T A;  4AKI A;  3SF6 A;  4Q4U A;  3DJL A;  4DZY A;  1IVH A;  3N0R A;  3OWM A;  3SWO A;  4X28 A;  2VIG A; 
#chains in the Genus database with same CATH homology
 4O5M A;  4ZYJ A;  3MMO A;  2REH A;  3BNH A;  1QDB A;  2A1T A;  3NF4 A;  4G5E A;  2YYM A;  2FON A;  4XVX A;  3R7K A;  1UKW A;  1BUC A;  3FCJ A;  2YYL A;  4X28 C;  1FS7 A;  3MXL A;  3MPJ A;  4Q17 A;  3GM6 A;  4L3Y A;  2JBT A;  4L38 A;  3OIB A;  1JQI A;  3LG1 A;  3MPI A;  3BNJ A;  2UXW A;  5K3G A;  2VR0 A;  1IS2 A;  4L1F A;  2YYK A;  3BNF A;  4Q5B A;  2IX5 A;  1UDY A;  5K3J A;  5K3H A;  3F29 A;  4Q0T A;  2RFQ A;  4Q5C A;  3MKH A;  4U83 A;  5K3I A;  3D9F A;  3L1T A;  3X0Y A;  4WJY A;  4KTO A;  2D29 A;  3AFF A;  3LGQ A;  1SIR A;  2JIF A;  4P13 A;  4W9U A;  1OAH A;  3UBR A;  3MDE A;  3RKH A;  2Z1Q A;  1EGC A;  1SIQ A;  2OT4 A;  3D1I A;  2DVL A;  2ZAF A;  1EGD A;  2CX9 A;  4JEK A;  1T9G A;  3P4T A;  4OO2 A;  1GU6 A;  3HWC A;  1RX0 A;  1WS9 A;  2EBA A;  3B96 A;  3OWA A;  2C0U A;  4KCF A;  2PG0 A;  2IX6 A;  4ZXV A;  2J7A A;  3AFE A;  2WBI A;  3GQT A;  4L3X A;  2ZO5 A;  2OR0 A;  3SCE A;  1EGE A;  2JBS A;  4N5F A;  3X0X A;  4Q1O A;  3TTB A;  4IV6 A;  2DDH A;  1U8V A;  3M9V A;  1W07 A;  1R2J A;  3S7W A;  2R0N A;  3D6B A;  3II9 A;  4NXL A;  2C12 A;  2R0M A;  2RF7 A;  3SXQ A;  2E80 A;  3TOR A;  4DOY A;  3PFD A;  4M9A A;  2E81 A;  3BNG A;  4RM7 A;  4HR3 A;  3UU9 A;  3D9E A;  3GNC A;  4L3Z A;  3D9G A;  4IRN A;  2JBR A;  2RDZ A;  2YYI A;  1FS9 A;  3EOM A;  3D9D A;  3MDD A;  2YYG A;  3FO3 A;  3EON A;  1FS8 A;  2YYJ A;  3SF6 A;  4Q4U A;  1IVH A;  3OWM A;  3SWO A;  4X28 A;  2VIG A; 
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similar chains in the Genus database (?% sequence similarity)
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