4IRNA

Crystal structure of the prolyl acyl carrier protein oxidase anab
Total Genus 142
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
142
sequence length
378
structure length
378
Chain Sequence
AWNSQQIQFRKKVIQFAQQSLISDLIKNDKEEIFNRDAWQKCSEFGVHGWPIPARYGGQELDILTTAYALQGLGYGCKDNGLIFAMNAHIWACEMPLLTFGTEEQKEKYLPLLCRGGWIASHAATEPQAGSDIYSLKTTAQKDGDKYILNGYKHYVTNGTIADLFIIFATIDPSLGKEGLTTFMIEKDTPGLILSKPISKMGMRTAEVPELRLENCEVSAANRLGEEGTGLAIFNHSMEWERGFILAAAVGTMERLLEQSIRYARSHKQFGQAIGKFQLVANKLVEMKLRLENAKAYLYKVAWMKENKQMALLEASMANLYISEAWVQSCLEAIEIHGAYGYLTNTELERELRDAIASKFYSGTSEIQRVVIAKFLGL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
source organism Oscillatoria sp.
publication title Structure of the prolyl-acyl carrier protein oxidase involved in the biosynthesis of the cyanotoxin anatoxin-a.
pubmed doi rcsb
molecule keywords Prolyl-ACP dehydrogenase
total genus 142
structure length 378
sequence length 378
chains with identical sequence B, C, D, E, F, G, H
ec nomenclature ec 1.3.99.-:
pdb deposition date 2013-01-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain
A PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain
A PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.540.10 Mainly Alpha Orthogonal Bundle Butyryl-Coa Dehydrogenase, subunit A; domain 1 Acyl-CoA dehydrogenase/oxidase, N-terminal domain 4irnA01
1.20.140.10 Mainly Alpha Up-down Bundle Butyryl-CoA Dehydrogenase, subunit A; domain 3 Butyryl-CoA Dehydrogenase, subunit A, domain 3 4irnA03
2.40.110.10 Mainly Beta Beta Barrel Butyryl-CoA Dehydrogenase, subunit A; domain 2 Butyryl-CoA Dehydrogenase, subunit A, domain 2 4irnA02
4WJYA 1QDBA 4ZYJA 3TORA 3EOMA 1JQIA 1R2JA 2C0UA 3F29A 1W07A 4L3XA 3X0YA 1T9GA 4IRNA 4Q17A 3SXQA 2YYMA 2ZAFA 3GM6A 3RKHA 4L3YA 3MMOA 2E81A 1GU6A 2J7AA 4O5MA 3MDDA 2VIGA 1FS9A 4Q4UA 1EGEA 4X28C 1EGCA 1SIQA 2YYKA 1FS7A 4DOYA 1FS8A 4N5FA 3D9FA 3OIBA 3S7WA 2C12A 3SCEA 2RFQA 2JIFA 3M9VA 4KTOA 3SWOA 1U8VA 4M9AA 3BNFA 2YYGA 4Q0TA 3L1TA 1RX0A 3MDEA 3D1IA 2JBRA 2D29A 5K3JA 2OT4A 3PFDA 1WS9A 3R7KA 1SIRA 4ZXVA 2UXWA 2CX9A 3AFEA 2Z1QA 3UBRA 3OWAA 3BNJA 2R0MA 4X28A 4U83A 3D6BA 2FONA 2EBAA 3MKHA 3SF6A 4HR3A 3X0XA 1OAHA 2R0NA 2YYLA 3FO3A 3TTBA 2DVLA 3D9DA 2RDZA 2REHA 3EONA 1BUCA 3MXLA 2VR0A 2ZO5A 3D9GA 3BNGA 4Q5BA 4W9UA 2JBTA 2YYIA 2WBIA 3AFFA 2OR0A 4G5EA 3B96A 3UU9A 4L1FA 3FCJA 4Q1OA 4IV6A 3D9EA 4P13A 4JEKA 2YYJA 3MPJA 4OO2A 3GNCA 2RF7A 2PG0A 3GQTA 4RM7A 3II9A 1EGDA 3OWMA 2A1TA 3HWCA 3LG1A 1IVHA 1UKWA 1UDYA 4Q5CA 2E80A 2JBSA 5K3GA 3P4TA 4NXLA 4L3ZA 5K3HA 4KCFA 2IX5A 3LGQA 4XVXA 5K3IA 2DDHA 3MPIA 4L38A 2IX6A 3NF4A 1IS2A 3BNHA
chains in the Genus database with same CATH superfamily
4WJYA 1QDBA 4ZYJA 4G97A 3TORA 3EOMA 1JQIA 1R2JA 2C0UA 2BTZA 3F29A 1W07A 1Y8NA 4H7QA 4L3XA 3CRKA 4JIZA 3X0YA 1T9GA 1XFWA 4IRNA 2AZEA 2LFWA 2BU5A 3CRLA 2YYMA 4Q17A 2ZAFA 2FP2A 2PNRA 3GM6A 3RKHA 3SXQA 2F6LA 3MMOA 2E81A 4L3YA 4MP7A 1GU6A 1XFYA 1RJ1A 2J7AA 4O5MA 4J1VA 4MP2A 3MDDA 2VIGA 4AKIA 1FS9A 4Q4UA 1EGEA 4E01A 1K93A 4X28C 1EGCA 1SIQA 2ZDXA 2YYKA 4FF1A 1K90A 1FS7A 4DOYA 1FS8A 4FF2A 1XFZA 4AKHA 4N5FA 3D9FA 3OIBA 2CJ4A 1Y0VA 4MPEA 1S26A 3TZ4A 3S7WA 2C12A 3SCEA 4LQSB 4LQQB 2RFQA 2JIFA 3M9VA 4KTOA 3SWOA 2OEXA 3KMLA 1U8VA 4M9AA 5M4PA 3BNFA 3DJLA 5J71A 3U33A 2YYGA 4Q0TA 1XFVA 3L1TA 5M4NA 4P79A 3TZ0A 1RX0A 1R3BA 1Y8OA 2OJQA 2GBBA 4H85A 5M4KA 1GKXA 2CJ8A 3MDEA 3D1IA 2Q8GA 3Q0AA 2JBRA 2D29A 5K3JA 2OT4A 3PFDA 4V25A 1WS9A 2R03A 3R7KA 4E02A 1SIRA 2YGWA 1XFUA 4ZXVA 2UXWA 4KSFA 4MPCA 2CX9A 3AFEA 4F0XA 1PK0A 1K8TA 2Z1QA 3Q24A 3TZ2A 4KS9A 5GJWE 3UBRA 3OWAA 2BU7A 3BNJA 2R0MA 4X28A 4U83A 3D6BA 2FONA 1SC5A 1X8ZA 3D2RA 4QICA 2EBAA 3MKHA 2OEVA 5B5WA 3X29A 4HKSA 3SF6A 4HR3A 2BU6A 3X0XA 1OAHA 1XG2B 2Q8IA 5M4MA 2R0NA 5J6AA 2YYLA 3FO3A 2R02A 3C3LA 3TZ5A 3Q22A 1RJ4A 5B5VA 3TTBA 5B6BA 2DVLA 1X90A 4FF3A 2E0AA 3D9DA 1PI1A 3C2PA 2BU8A 2RDZA 4AI6A 2REHA 3EONA 2R05A 2ZDYA 4DZYA 1BUCA 3MXLA 2VR0A 1XFXA 3D9GA 2ZO5A 3BNGA 4MPNA 3N0RA 4Q5BA 2Q8FA 4W9UA 2JBTA 2CJ7A 2WBIA 3AFFA 1SK6A 2EBHX 2OR0A 2YYIA 4H81A 4G5EA 3B96A 4AKGA 3VKGA 2XS1A 1LVCA 2EBFX 3UU9A 4L1FA 2VF1A 2AO2A 3FCJA 5BRMA 4Q1OA 2HJNA 4IV6A 3D9EA 4P13A 4JEKA 2YYJA 3BNHA 3MPJA 4OO2A 3GNCA 2RF7A 5GJVE 2PG0A 3GQTA 4RM7A 3II9A 2EC5A 5BRKA 1GKZA 1X91A 1EGDA 2FP1A 2BU2A 3OWMA 2A1TA 3HWCA 1JM6A 3LG1A 4V26A 1IVHA 3VADA 3C46A 2XQRB 4E00A 1Y8PA 2XS8A 5EZ3A 4FF4A 2ZKJA 4FZ4A 1UKWA 2CJ6A 4HKRA 1UDYA 2CJ5A 4Q5CA 3CE2A 1RP3A 2E80A 2JBSA 5K3GA 3P4TA 4NXLA 4L3ZA 5K3HA 4KCFA 2IX5A 3Q23A 3LGQA 4XVXA 2PO4A 5K3IA 2DDHA 4JIOA 3MPIA 2QR4A 4L38A 3VKHA 2IX6A 4KSAA 2Q8HA 3NF4A 1IS2A 1GJVA
chains in the Genus database with same CATH topology
4WJYA 1QDBA 4ZYJA 3TORA 3EOMA 1JQIA 1R2JA 2C0UA 3F29A 1W07A 4L3XA 3X0YA 1T9GA 4IRNA 4Q17A 3SXQA 2YYMA 2ZAFA 3GM6A 3RKHA 4L3YA 3MMOA 2E81A 1GU6A 2J7AA 4O5MA 3MDDA 2VIGA 1FS9A 4Q4UA 1EGEA 4X28C 1EGCA 1SIQA 2YYKA 1FS7A 4DOYA 1FS8A 4N5FA 3D9FA 3OIBA 3S7WA 2C12A 3SCEA 2RFQA 2JIFA 3M9VA 4KTOA 3SWOA 1U8VA 4M9AA 3BNFA 2YYGA 4Q0TA 3L1TA 1RX0A 3MDEA 3D1IA 2JBRA 2D29A 5K3JA 2OT4A 3PFDA 1WS9A 3R7KA 1SIRA 4ZXVA 2UXWA 2CX9A 3AFEA 2Z1QA 3UBRA 3OWAA 3BNJA 2R0MA 4X28A 4U83A 3D6BA 2FONA 2EBAA 3MKHA 3SF6A 4HR3A 3X0XA 1OAHA 2R0NA 2YYLA 3FO3A 3TTBA 2DVLA 3D9DA 2RDZA 2REHA 3EONA 1BUCA 3MXLA 2VR0A 2ZO5A 3D9GA 3BNGA 4Q5BA 4W9UA 2JBTA 2YYIA 2WBIA 3AFFA 2OR0A 4G5EA 3B96A 3UU9A 4L1FA 3FCJA 4Q1OA 4IV6A 3D9EA 4P13A 4JEKA 2YYJA 3MPJA 4OO2A 3GNCA 2RF7A 2PG0A 3GQTA 4RM7A 3II9A 1EGDA 3OWMA 2A1TA 3HWCA 3LG1A 1IVHA 1UKWA 1UDYA 4Q5CA 2E80A 2JBSA 5K3GA 3P4TA 4NXLA 4L3ZA 5K3HA 4KCFA 2IX5A 3LGQA 4XVXA 5K3IA 2DDHA 3MPIA 4L38A 2IX6A 3NF4A 1IS2A 3BNHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4WJY A;  1QDB A;  4ZYJ A;  3TOR A;  3EOM A;  1JQI A;  1R2J A;  2C0U A;  3F29 A;  1W07 A;  4L3X A;  3X0Y A;  1T9G A;  4IRN A;  4Q17 A;  3SXQ A;  2YYM A;  2ZAF A;  3GM6 A;  3RKH A;  4L3Y A;  3MMO A;  2E81 A;  1GU6 A;  2J7A A;  4O5M A;  3MDD A;  2VIG A;  1FS9 A;  4Q4U A;  1EGE A;  4X28 C;  1EGC A;  1SIQ A;  2YYK A;  1FS7 A;  4DOY A;  1FS8 A;  4N5F A;  3D9F A;  3OIB A;  3S7W A;  2C12 A;  3SCE A;  2RFQ A;  2JIF A;  3M9V A;  4KTO A;  3SWO A;  1U8V A;  4M9A A;  3BNF A;  2YYG A;  4Q0T A;  3L1T A;  1RX0 A;  3MDE A;  3D1I A;  2JBR A;  2D29 A;  5K3J A;  2OT4 A;  3PFD A;  1WS9 A;  3R7K A;  1SIR A;  4ZXV A;  2UXW A;  2CX9 A;  3AFE A;  2Z1Q A;  3UBR A;  3OWA A;  3BNJ A;  2R0M A;  4X28 A;  4U83 A;  3D6B A;  2FON A;  2EBA A;  3MKH A;  3SF6 A;  4HR3 A;  3X0X A;  1OAH A;  2R0N A;  2YYL A;  3FO3 A;  3TTB A;  2DVL A;  3D9D A;  2RDZ A;  2REH A;  3EON A;  1BUC A;  3MXL A;  2VR0 A;  2ZO5 A;  3D9G A;  3BNG A;  4Q5B A;  4W9U A;  2JBT A;  2YYI A;  2WBI A;  3AFF A;  2OR0 A;  4G5E A;  3B96 A;  3UU9 A;  4L1F A;  3FCJ A;  4Q1O A;  4IV6 A;  3D9E A;  4P13 A;  4JEK A;  2YYJ A;  3MPJ A;  4OO2 A;  3GNC A;  2RF7 A;  2PG0 A;  3GQT A;  4RM7 A;  3II9 A;  1EGD A;  3OWM A;  2A1T A;  3HWC A;  3LG1 A;  1IVH A;  1UKW A;  1UDY A;  4Q5C A;  2E80 A;  2JBS A;  5K3G A;  3P4T A;  4NXL A;  4L3Z A;  5K3H A;  4KCF A;  2IX5 A;  3LGQ A;  4XVX A;  5K3I A;  2DDH A;  3MPI A;  4L38 A;  2IX6 A;  3NF4 A;  1IS2 A;  3BNH A; 
#chains in the Genus database with same CATH topology
 4WJY A;  1QDB A;  4ZYJ A;  4G97 A;  3TOR A;  3EOM A;  1JQI A;  1R2J A;  2C0U A;  2BTZ A;  3F29 A;  1W07 A;  1Y8N A;  4H7Q A;  4L3X A;  3CRK A;  4JIZ A;  3X0Y A;  1T9G A;  1XFW A;  4IRN A;  2AZE A;  2LFW A;  2BU5 A;  3CRL A;  2YYM A;  4Q17 A;  2ZAF A;  2FP2 A;  2PNR A;  3GM6 A;  3RKH A;  3SXQ A;  2F6L A;  3MMO A;  2E81 A;  4L3Y A;  4MP7 A;  1GU6 A;  1XFY A;  1RJ1 A;  2J7A A;  4O5M A;  4J1V A;  4MP2 A;  3MDD A;  2VIG A;  4AKI A;  1FS9 A;  4Q4U A;  1EGE A;  4E01 A;  1K93 A;  4X28 C;  1EGC A;  1SIQ A;  2ZDX A;  2YYK A;  4FF1 A;  1K90 A;  1FS7 A;  4DOY A;  1FS8 A;  4FF2 A;  1XFZ A;  4AKH A;  4N5F A;  3D9F A;  3OIB A;  2CJ4 A;  1Y0V A;  4MPE A;  1S26 A;  3TZ4 A;  3S7W A;  2C12 A;  3SCE A;  4LQS B;  4LQQ B;  2RFQ A;  2JIF A;  3M9V A;  4KTO A;  3SWO A;  2OEX A;  3KML A;  1U8V A;  4M9A A;  5M4P A;  3BNF A;  3DJL A;  5J71 A;  3U33 A;  2YYG A;  4Q0T A;  1XFV A;  3L1T A;  5M4N A;  4P79 A;  3TZ0 A;  1RX0 A;  1R3B A;  1Y8O A;  2OJQ A;  2GBB A;  4H85 A;  5M4K A;  1GKX A;  2CJ8 A;  3MDE A;  3D1I A;  2Q8G A;  3Q0A A;  2JBR A;  2D29 A;  5K3J A;  2OT4 A;  3PFD A;  4V25 A;  1WS9 A;  2R03 A;  3R7K A;  4E02 A;  1SIR A;  2YGW A;  1XFU A;  4ZXV A;  2UXW A;  4KSF A;  4MPC A;  2CX9 A;  3AFE A;  4F0X A;  1PK0 A;  1K8T A;  2Z1Q A;  3Q24 A;  3TZ2 A;  4KS9 A;  5GJW E;  3UBR A;  3OWA A;  2BU7 A;  3BNJ A;  2R0M A;  4X28 A;  4U83 A;  3D6B A;  2FON A;  1SC5 A;  1X8Z A;  3D2R A;  4QIC A;  2EBA A;  3MKH A;  2OEV A;  5B5W A;  3X29 A;  4HKS A;  3SF6 A;  4HR3 A;  2BU6 A;  3X0X A;  1OAH A;  1XG2 B;  2Q8I A;  5M4M A;  2R0N A;  5J6A A;  2YYL A;  3FO3 A;  2R02 A;  3C3L A;  3TZ5 A;  3Q22 A;  1RJ4 A;  5B5V A;  3TTB A;  5B6B A;  2DVL A;  1X90 A;  4FF3 A;  2E0A A;  3D9D A;  1PI1 A;  3C2P A;  2BU8 A;  2RDZ A;  4AI6 A;  2REH A;  3EON A;  2R05 A;  2ZDY A;  4DZY A;  1BUC A;  3MXL A;  2VR0 A;  1XFX A;  3D9G A;  2ZO5 A;  3BNG A;  4MPN A;  3N0R A;  4Q5B A;  2Q8F A;  4W9U A;  2JBT A;  2CJ7 A;  2WBI A;  3AFF A;  1SK6 A;  2EBH X;  2OR0 A;  2YYI A;  4H81 A;  4G5E A;  3B96 A;  4AKG A;  3VKG A;  2XS1 A;  1LVC A;  2EBF X;  3UU9 A;  4L1F A;  2VF1 A;  2AO2 A;  3FCJ A;  5BRM A;  4Q1O A;  2HJN A;  4IV6 A;  3D9E A;  4P13 A;  4JEK A;  2YYJ A;  3BNH A;  3MPJ A;  4OO2 A;  3GNC A;  2RF7 A;  5GJV E;  2PG0 A;  3GQT A;  4RM7 A;  3II9 A;  2EC5 A;  5BRK A;  1GKZ A;  1X91 A;  1EGD A;  2FP1 A;  2BU2 A;  3OWM A;  2A1T A;  3HWC A;  1JM6 A;  3LG1 A;  4V26 A;  1IVH A;  3VAD A;  3C46 A;  2XQR B;  4E00 A;  1Y8P A;  2XS8 A;  5EZ3 A;  4FF4 A;  2ZKJ A;  4FZ4 A;  1UKW A;  2CJ6 A;  4HKR A;  1UDY A;  2CJ5 A;  4Q5C A;  3CE2 A;  1RP3 A;  2E80 A;  2JBS A;  5K3G A;  3P4T A;  4NXL A;  4L3Z A;  5K3H A;  4KCF A;  2IX5 A;  3Q23 A;  3LGQ A;  4XVX A;  2PO4 A;  5K3I A;  2DDH A;  4JIO A;  3MPI A;  2QR4 A;  4L38 A;  3VKH A;  2IX6 A;  4KSA A;  2Q8H A;  3NF4 A;  1IS2 A;  1GJV A; 
#chains in the Genus database with same CATH homology
 4WJY A;  1QDB A;  4ZYJ A;  3TOR A;  3EOM A;  1JQI A;  1R2J A;  2C0U A;  3F29 A;  1W07 A;  4L3X A;  3X0Y A;  1T9G A;  4IRN A;  4Q17 A;  3SXQ A;  2YYM A;  2ZAF A;  3GM6 A;  3RKH A;  4L3Y A;  3MMO A;  2E81 A;  1GU6 A;  2J7A A;  4O5M A;  3MDD A;  2VIG A;  1FS9 A;  4Q4U A;  1EGE A;  4X28 C;  1EGC A;  1SIQ A;  2YYK A;  1FS7 A;  4DOY A;  1FS8 A;  4N5F A;  3D9F A;  3OIB A;  3S7W A;  2C12 A;  3SCE A;  2RFQ A;  2JIF A;  3M9V A;  4KTO A;  3SWO A;  1U8V A;  4M9A A;  3BNF A;  2YYG A;  4Q0T A;  3L1T A;  1RX0 A;  3MDE A;  3D1I A;  2JBR A;  2D29 A;  5K3J A;  2OT4 A;  3PFD A;  1WS9 A;  3R7K A;  1SIR A;  4ZXV A;  2UXW A;  2CX9 A;  3AFE A;  2Z1Q A;  3UBR A;  3OWA A;  3BNJ A;  2R0M A;  4X28 A;  4U83 A;  3D6B A;  2FON A;  2EBA A;  3MKH A;  3SF6 A;  4HR3 A;  3X0X A;  1OAH A;  2R0N A;  2YYL A;  3FO3 A;  3TTB A;  2DVL A;  3D9D A;  2RDZ A;  2REH A;  3EON A;  1BUC A;  3MXL A;  2VR0 A;  2ZO5 A;  3D9G A;  3BNG A;  4Q5B A;  4W9U A;  2JBT A;  2YYI A;  2WBI A;  3AFF A;  2OR0 A;  4G5E A;  3B96 A;  3UU9 A;  4L1F A;  3FCJ A;  4Q1O A;  4IV6 A;  3D9E A;  4P13 A;  4JEK A;  2YYJ A;  3MPJ A;  4OO2 A;  3GNC A;  2RF7 A;  2PG0 A;  3GQT A;  4RM7 A;  3II9 A;  1EGD A;  3OWM A;  2A1T A;  3HWC A;  3LG1 A;  1IVH A;  1UKW A;  1UDY A;  4Q5C A;  2E80 A;  2JBS A;  5K3G A;  3P4T A;  4NXL A;  4L3Z A;  5K3H A;  4KCF A;  2IX5 A;  3LGQ A;  4XVX A;  5K3I A;  2DDH A;  3MPI A;  4L38 A;  2IX6 A;  3NF4 A;  1IS2 A;  3BNH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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