5JYA | Genus

Total Genus 106

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	106
sequence length	333
structure length	330
Chain Sequence	VKVGINGFGRIGRLAFRRIQNVEGVEVTRINDLTDPNMLAHLLKYDTTQGRFDGTVEVKEGGFEVNGQFVKVSAEREPANIDWATDGVEIVLEATGFFASKEKAEQHIHEGAKKVVITAPGGNDVKTVVFNTNHDILDGTETVISGASSTTNCLAPMAKALQDNFGVKQGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAIGLVIPELNGKLDGAAQRVPVPTGSVTELVATLEKDVTVEEVNAAMKAAANDSYGYTEDPIVSSDIVGISYGSLFDATQTKVQTVDGNQLVKVVSWYDNEMSYTSQLVRTLEYFAKIA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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Viewer cachePut cache://localLOAD_/file/5d0e31f3e830ce68657cabcf/pdb.gz

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The Resolver thinks Pdb

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Time for openFile(/file/5d0e31f3e830ce68657cabcf/pdb.gz): 1060 ms

reading 330 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

330 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 26 ms

Adding embedded #jmolscript: select ({0:329});backbone only;select *;

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Oxidoreductase
source organism	Streptococcus agalactiae
publication title	Crystal Structures of Group B Streptococcus Glyceraldehyde-3-Phosphate Dehydrogenase: Apo-Form, Binary and Ternary Complexes. pubmed doi rcsb
molecule keywords	Glyceraldehyde-3-phosphate dehydrogenase
total genus	106
structure length	330
sequence length	333
chains with identical sequence	B, C, D
ec nomenclature	ec 1.2.1.-:
pdb deposition date	2016-05-13

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00044	Gp_dh_N	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A	PF02800	Gp_dh_C	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.360.10	Alpha Beta	2-Layer Sandwich	Dihydrodipicolinate Reductase; domain 2	Dihydrodipicolinate Reductase; domain 2	5jyaA02

1YDWA 1Q7GA 1CRWG 2EP7A 1VKNA 1P9LA 4MVJA 4DPMA 2OZPA 3RBVA 3FHLA 5JY6A 3QVSA 2I5PO 4WOJA 4IQ8A 3WYBA 3C8MA 1T4DA 1JN0A 1VC2A 4PG4A 1DIHA 3E5RA 1RYDA 3ZDFA 4FB5A 4DPLA 3QV1A 2X5JO 5AVOA 1TVEA 3NTQA 2NQTA 2R00A 3DR3A 4R51A 3KUXA 1PR3A 2R00C 3Q2KA 2G82A 1P1FA 1GAEO 3DOCA 3E82A 4ZHSA 3DO5A 3MOIA 1DC6A 1E7MA 3IJPA 4R3NA 3Q0EA 3PFWO 2Q22A 1RM5A 4HADA 4GQAA 4DIBA 1RYEA 2D2IA 1I32A 1PQUA 3GNQA 2IXAA 4PG7A 5A03A 4MIEA 3LC1O 1EBFA 2YYYA 1LC0A 2XF8A 3WYCA 3KSDO 2CVOA 3INGA 1H6BA 3V2UA 1NBOA 2GZ3A 3STHA 3DTYA 4P8RA 1H9BA 2EJWA 3RVDA 3NTRA 3B20A 4MVJP 2Q4EA 3VAZA 3L6OO 2PKQO 4JN6B 1QKIA 4MKXA 3L4SO 3GFGA 1IHYA 4LRSB 4MIYA 2QZ9A 2G17A 1H9AA 1IHXA 4XB1A 3OA2A 2AXQA 3NT2A 3VOSA 1P1KA 4EW6A 3KSZO 3QY9A 2GLXA 3E6AA 1DRVA 1NX6A 3OQBA 1GL3A 1S7CA 1GCUA 2EP5A 1H93A 2P2SA 3HNPA 3CINA 2VYNA 1GPDG 1J0XO 1ML3A 3WGYA 3B1JA 3WB9A 4O59O 4NHEA 1DPGA 3QVTA 1PS8A 2B4RO 1E5QA 3EUWA 3E1KA 1NQAO 1RM4A 3ABIA 2Q49A 3HSKA 3MTJA 1PQPA 1BRMA 4R54A 2DPGA 3IP3A 1YL5A 1NWCA 4YDRA 5A04A 3QVWA 2DUUA 3CEAA 3B1KA 5EIOA 3DMTA 1YS4A 1K3TA 5JYEA 4K9DA 2HJSA 1H6DA 3DMTC 1H94A 3JSAA 4R3WA 1YL6A 2VYVD 3UW3A 5GZ6A 1TLTA 3NTOA 1DSSG 1JKIA 1TB4A 3WGQA 2GD1O 1ZH8A 1XEAA 1LA2A 3ZCXA 1ARZA 3LVFO 5AQ1A 1DC3A 5A06A 3E18A 2POQX 4MVJM 3DB2A 1GADO 3C1AA 1T4BA 1TA4A 3QVXA 3FD8A 3BTVA 1YWGO 4H3VA 3F4LA 1CERA 3OHSX 2VYND 1LC3A 4GMFA 1VSVA 3Q1LA 2I3GA 3PWSA 4R5HA 1H2HA 3CIFA 4N54A 4F3YA 4MVJI 1F06A 5CEFA 4MVJD 5JYAA 5A05A 3H9EO 5C7IO 3WGOA 4R5MA 3NT5A 3PWKA 3CMCO 4XB2A 3E9MA 2DC1A 2YV3A 1NPTO 2X5KO 3TZ6A 1VSUA 1OBFO 3K9QO 3PYLA 3BIOA 3MZ0A 4Z0HO 4DPKA 1DC5A 1E7YA 4WNIA 1OFGA 2BHLA 3RC1A 3RC7A 5EERA 1GD1O 3WGZA 4KOAA 1C3VA 2PKQP 3UUWA 3NT4A 3KV3O 1HDGO 5C7OO 4L9RA 1VM6A 3QW2A 2DBVO 4YWJA 1B7GO 4MVJG 3V1YA 4LGVA 5M6DA 4MVJE 1SZJG 3LC2O 2HO5A 1DRUA 2GYYA 5GZ1A 5EESA 5JW6A 4L8VA 1VKOA 2HKIA 5C7LO 3EC7A 1CF2O 3GDOA 1RM0A 3PZRA 1GR0A 5J9GA 1MC4A 3Q11A 2X0NA 4MIOA 1EVJA 4WNCA 3DAPA 1I33A 1NWHA 4GPD1 4INAA 1U8FO 4O63O 1Q2XA 3K73O 4R4JA 1DC4A 4PG8A 2NVWA 1MB4A 1EBUA 3IDSA 4PG6A 5EINA 2GZ2A 4MVJF 4R41A 1U1IA 1H6CA 1E77A 4IQ0A 3WBFA 1NQ5A 2PKRA 3DBVO 3EVNA 5KVQA 2DAPA 3RC2A 4HKTA 2I3AA 1OZAA 2O4UX 4MKZA 4PG5A 3PYXA 4ZICA 1DBVO 1JKFA 1GYPA 3LC7O 4DBVO 3V5NA 1P1IA 3WBBA 1FF9A 3RC9A 5DDIP 3GPDG 2VYVA 2CZCA 3Q2IA 5JYFA 1E5LA 3M2TA 1P1HA 4BOYA 3PZBA 3RCBA 5KVSA 4LSMA 1A7KA 1YL7A 1NQOA 1ZNQO 2GZ1A 3BTSA 1RM3A 4MJLA 1XYGA 2BH9A 1DAPA 1DRWA 2IXBA 1NVMB 4MINA 3HQ4O 5GZ3A 4RL6A 3O9ZA 1H6AA 3BTUA 3L0DA 3PYMA 3U3XA 2H63A 4MVJH 1P1JA 4GMGA 5BNTA 4LRTB 1J5PA 2B4TO 1GYQA 3K2BA 4QX6A 2O48X 3CPSA 5A02A 3EZYA 5T73A 3HJAA 1QXSA 1PU2A 3OA0A 3I23A
chains in the Genus database with same CATH superfamily

1YDWA 3HXLA 3ZJXA 1Q7GA 1CRWG 2EP7A 1VKNA 1P9LA 4MVJA 4DPMA 2OZPA 3RBVA 3FHLA 5JY6A 3QVSA 2I5PO 4WOJA 4IQ8A 3WYBA 3C8MA 1T4DA 1JN0A 1VC2A 4PG4A 1DIHA 3E5RA 1RYDA 3ZDFA 4FB5A 4DPLA 3QV1A 2X5JO 3DZ6B 5AVOA 1TVEA 5TVOB 3NTQA 2NQTA 2R00A 3DR3A 4R51A 1I7MB 3KUXA 1PR3A 2R00C 3Q2KA 2G82A 1P1FA 3IWDB 1GAEO 3DOCA 3E82A 3EP6B 4ZHSA 3DO5A 3MOIA 1DC6A 1E7MA 3IJPA 4R3NA 3Q0EA 3PFWO 2Q22A 1RM5A 4GQAA 4HADA 4DIBA 1RYEA 2D2IA 1I32A 1PQUA 3GNQA 2IXAA 4PG7A 5A03A 4MIEA 3LC1O 1EBFA 2YYYA 1LC0A 2XF8A 3WYCA 3DZ3B 3KSDO 2CVOA 3INGA 1H6BA 3V2UA 1NBOA 2GZ3A 3STHA 3DTYA 4P8RA 1H9BA 2EJWA 1I7BB 3RVDA 3NTRA 3B20A 4MVJP 2Q4EA 4XQEA 1I79B 3VAZA 3L6OO 2PKQO 4JN6B 1QKIA 4MKXA 3L4SO 3GFGA 1IHYA 4LRSB 3DZ7B 4MIYA 2QZ9A 2G17A 1H9AA 1IHXA 4XB1A 3OA2A 2AXQA 3NT2A 3VOSA 1P1KA 4EW6A 4XQGA 3KSZO 3QY9A 2GLXA 3E6AA 3TUXA 1DRVA 1NX6A 3OQBA 1GL3A 3EPAB 1QMHA 1I7CB 1S7CA 1GCUA 3DZ4B 2EP5A 1H93A 2P2SA 3HNPA 3CINA 3TUTA 2VYNA 1GPDG 1J0XO 1ML3A 3WGYA 3B1JA 3WB9A 3EP5B 4O59O 4NHEA 1DPGA 3QVTA 1PS8A 2B4RO 1E5QA 3EUWA 4XQCA 3E1KA 4PLPA 1NQAO 1RM4A 3ABIA 2Q49A 3HSKA 3MTJA 1PQPA 1BRMA 4R54A 2DPGA 4XR4A 3IP3A 1YL5A 1NWCA 4YDRA 5A04A 3QVWA 2DUUA 3CEAA 3B1KA 5EIOA 2PH5A 4AK1A 3DMTA 1YS4A 1K3TA 3KGDA 5JYEA 4K9DA 2HJSA 1H6DA 3DMTC 1H94A 3JSAA 4R3WA 1YL6A 2VYVD 3UW3A 5GZ6A 1TLTA 3NTOA 1UYJA 4TVBA 3H0WB 1DSSG 1JKIA 1TB4A 3WGQA 2GD1O 1ZH8A 1XEAA 3PQVA 3DZ5B 1LA2A 3ZCXA 1ARZA 3LVFO 5AQ1A 1DC3A 5A06A 1QMIA 3E18A 2POQX 4MVJM 3EP9B 3DB2A 1GADO 3C1AA 1T4BA 1TA4A 3QVXA 3FD8A 4CLQA 3BTVA 1YWGO 4H3VA 3F4LA 1CERA 3OHSX 2VYND 1LC3A 4GMFA 1VSVA 3Q1LA 2I3GA 3EP4B 3PWSA 3EPBB 4R5HA 1H2HA 3CIFA 4N54A 3IWCB 4F3YA 4MVJI 1F06A 5CEFA 4MVJD 5JYAA 5A05A 3H9EO 5C7IO 3WGOA 4R5MA 3NT5A 3PWKA 3CMCO 4XB2A 3E9MA 2DC1A 2YV3A 1NPTO 2X5KO 3TZ6A 1VSUA 1OBFO 3K9QO 3PYLA 3BIOA 3MZ0A 4Z0HO 4DPKA 1DC5A 1E7YA 4WNIA 4O89A 1OFGA 2BHLA 3RC1A 3RC7A 5EERA 1GD1O 3WGZA 4KOAA 1C3VA 2PKQP 3UUWA 3NT4A 3KV3O 1HDGO 5C7OO 4L9RA 1VM6A 3QW2A 2DBVO 4YWJA 1I72B 1B7GO 4MVJG 3V1YA 4LGVA 5M6DA 4MVJE 1SZJG 3LC2O 2HO5A 1DRUA 2GYYA 4XQ9A 1JENB 5GZ1A 5EESA 3TV1A 5JW6A 4II7A 4L8VA 1VKOA 2HKIA 5C7LO 3EC7A 1CF2O 3GDOA 1RM0A 3PZRA 3H0VB 1GR0A 5J9GA 1MC4A 3Q11A 2X0NA 4MIOA 1EVJA 4WNCA 3DAPA 1I33A 1NWHA 4GPD1 4INAA 1U8FO 4O63O 1Q2XA 3K73O 4R4JA 4XRGA 1DC4A 4PG8A 2NVWA 1MB4A 4O8JA 3DZ2B 1EBUA 3IDSA 4PG6A 5EINA 2GZ2A 4MVJF 4R41A 1U1IA 1H6CA 1E77A 4IQ0A 3WBFA 1NQ5A 2PKRA 3DBVO 3EVNA 5KVQA 2DAPA 3RC2A 4HKTA 2I3AA 1OZAA 2O4UX 4MKZA 4PG5A 3PYXA 4ZICA 1DBVO 1JKFA 1GYPA 3LC7O 4DBVO 3V5NA 1P1IA 3WBBA 1FF9A 3RC9A 5DDIP 3GPDG 2VYVA 2CZCA 3Q2IA 5JYFA 1E5LA 3M2TA 1P1HA 4BOYA 3TW3A 3PZBA 2FPNA 3RCBA 5KVSA 4LSMA 1A7KA 1MHMB 1YL7A 1NQOA 1ZNQO 2GZ1A 3BTSA 1RM3A 4MJLA 1XYGA 2BH9A 1DAPA 1DRWA 2IXBA 1NVMB 4MINA 3HQ4O 5GZ3A 4RL6A 3O9ZA 1H6AA 3BTUA 3L0DA 3PYMA 3U3XA 2H63A 4MVJH 1P1JA 4GMGA 5BNTA 3EP8B 4LRTB 1J5PA 2B4TO 1GYQA 3K2BA 4QX6A 2O48X 3CPSA 5A02A 3EP3B 3EZYA 3EP7B 5T73A 3HJAA 1QXSA 3IWBB 1PU2A 3OA0A 3I23A
chains in the Genus database with same CATH topology

1YDWA 3HXLA 3ZJXA 1Q7GA 1CRWG 2EP7A 1VKNA 1P9LA 4MVJA 4DPMA 2OZPA 3RBVA 3FHLA 5JY6A 3QVSA 2I5PO 4WOJA 4IQ8A 3WYBA 3C8MA 1T4DA 1JN0A 1VC2A 4PG4A 1DIHA 3E5RA 1RYDA 3ZDFA 4FB5A 4DPLA 3QV1A 2X5JO 5AVOA 1TVEA 3NTQA 2NQTA 2R00A 3DR3A 4R51A 3KUXA 1PR3A 2R00C 3Q2KA 2G82A 1P1FA 3IWDB 1GAEO 3DOCA 3E82A 4ZHSA 3DO5A 3MOIA 1DC6A 1E7MA 3IJPA 4R3NA 3Q0EA 3PFWO 2Q22A 1RM5A 4HADA 4GQAA 4DIBA 1RYEA 2D2IA 1I32A 1PQUA 3GNQA 2IXAA 4PG7A 5A03A 4MIEA 3LC1O 1EBFA 2YYYA 1LC0A 2XF8A 3WYCA 3KSDO 2CVOA 3INGA 1H6BA 3V2UA 1NBOA 2GZ3A 3STHA 3DTYA 4P8RA 1H9BA 2EJWA 3RVDA 3NTRA 3B20A 4MVJP 2Q4EA 3VAZA 3L6OO 2PKQO 4JN6B 1QKIA 4MKXA 3L4SO 3GFGA 1IHYA 4LRSB 4MIYA 2QZ9A 2G17A 1H9AA 1IHXA 4XB1A 3OA2A 2AXQA 3NT2A 3VOSA 1P1KA 4EW6A 3KSZO 3QY9A 2GLXA 3E6AA 3TUXA 1DRVA 1NX6A 3OQBA 1GL3A 1QMHA 1S7CA 1GCUA 2EP5A 1H93A 2P2SA 3HNPA 3CINA 3TUTA 2VYNA 1GPDG 1J0XO 1ML3A 3WGYA 3B1JA 3WB9A 4O59O 4NHEA 1DPGA 3QVTA 1PS8A 2B4RO 1E5QA 3EUWA 3E1KA 1NQAO 1RM4A 3ABIA 2Q49A 3HSKA 3MTJA 1PQPA 1BRMA 4R54A 2DPGA 3IP3A 1YL5A 1NWCA 4YDRA 5A04A 3QVWA 2DUUA 3CEAA 3B1KA 5EIOA 4AK1A 3DMTA 1YS4A 1K3TA 3KGDA 5JYEA 4K9DA 2HJSA 1H6DA 3DMTC 1H94A 3JSAA 4R3WA 1YL6A 2VYVD 3UW3A 5GZ6A 1TLTA 3NTOA 1UYJA 1DSSG 1JKIA 1TB4A 3WGQA 2GD1O 1ZH8A 1XEAA 3PQVA 1LA2A 3ZCXA 1ARZA 3LVFO 5AQ1A 1DC3A 5A06A 1QMIA 3E18A 2POQX 4MVJM 3DB2A 1GADO 3C1AA 1T4BA 1TA4A 3QVXA 3FD8A 4CLQA 3BTVA 1YWGO 4H3VA 3F4LA 1CERA 3OHSX 2VYND 1LC3A 4GMFA 1VSVA 3Q1LA 2I3GA 3PWSA 4R5HA 1H2HA 3CIFA 4N54A 3IWCB 4F3YA 4MVJI 1F06A 5CEFA 4MVJD 5JYAA 5A05A 3H9EO 5C7IO 3WGOA 4R5MA 3NT5A 3PWKA 3CMCO 4XB2A 3E9MA 2DC1A 2YV3A 1NPTO 2X5KO 3TZ6A 1VSUA 1OBFO 3K9QO 3PYLA 3BIOA 3MZ0A 4Z0HO 4DPKA 1DC5A 1E7YA 4WNIA 4O89A 1OFGA 2BHLA 3RC1A 3RC7A 5EERA 1GD1O 3WGZA 4KOAA 1C3VA 2PKQP 3UUWA 3NT4A 3KV3O 1HDGO 5C7OO 4L9RA 1VM6A 3QW2A 2DBVO 4YWJA 1B7GO 4MVJG 3V1YA 4LGVA 5M6DA 4MVJE 1SZJG 3LC2O 2HO5A 1DRUA 2GYYA 5GZ1A 5EESA 3TV1A 5JW6A 4II7A 4L8VA 1VKOA 2HKIA 5C7LO 3EC7A 1CF2O 3GDOA 1RM0A 3PZRA 1GR0A 5J9GA 1MC4A 3Q11A 2X0NA 4MIOA 1EVJA 4WNCA 3DAPA 1I33A 1NWHA 4GPD1 4INAA 1U8FO 4O63O 1Q2XA 3K73O 4R4JA 1DC4A 4PG8A 2NVWA 1MB4A 4O8JA 1EBUA 3IDSA 4PG6A 5EINA 2GZ2A 4MVJF 4R41A 1U1IA 1H6CA 1E77A 4IQ0A 3WBFA 1NQ5A 2PKRA 3DBVO 3EVNA 5KVQA 2DAPA 3RC2A 4HKTA 2I3AA 1OZAA 2O4UX 4MKZA 4PG5A 3PYXA 4ZICA 1DBVO 1JKFA 1GYPA 3LC7O 4DBVO 3V5NA 1P1IA 3WBBA 1FF9A 3RC9A 5DDIP 3GPDG 2VYVA 2CZCA 3Q2IA 5JYFA 1E5LA 3M2TA 1P1HA 4BOYA 3TW3A 3PZBA 3RCBA 5KVSA 4LSMA 1A7KA 1YL7A 1NQOA 1ZNQO 2GZ1A 3BTSA 1RM3A 4MJLA 1XYGA 2BH9A 1DAPA 1DRWA 2IXBA 1NVMB 4MINA 3HQ4O 5GZ3A 4RL6A 3O9ZA 1H6AA 3BTUA 3L0DA 3PYMA 3U3XA 2H63A 4MVJH 1P1JA 4GMGA 5BNTA 4LRTB 1J5PA 2B4TO 1GYQA 3K2BA 4QX6A 2O48X 3CPSA 5A02A 3EZYA 5T73A 3HJAA 1QXSA 3IWBB 1PU2A 3OA0A 3I23A
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 1YDW A;  1Q7G A;  1CRW G;  2EP7 A;  1VKN A;  1P9L A;  4MVJ A;  4DPM A;  2OZP A;  3RBV A;  3FHL A;  5JY6 A;  3QVS A;  2I5P O;  4WOJ A;  4IQ8 A;  3WYB A;  3C8M A;  1T4D A;  1JN0 A;  1VC2 A;  4PG4 A;  1DIH A;  3E5R A;  1RYD A;  3ZDF A;  4FB5 A;  4DPL A;  3QV1 A;  2X5J O;  5AVO A;  1TVE A;  3NTQ A;  2NQT A;  2R00 A;  3DR3 A;  4R51 A;  3KUX A;  1PR3 A;  2R00 C;  3Q2K A;  2G82 A;  1P1F A;  1GAE O;  3DOC A;  3E82 A;  4ZHS A;  3DO5 A;  3MOI A;  1DC6 A;  1E7M A;  3IJP A;  4R3N A;  3Q0E A;  3PFW O;  2Q22 A;  1RM5 A;  4HAD A;  4GQA A;  4DIB A;  1RYE A;  2D2I A;  1I32 A;  1PQU A;  3GNQ A;  2IXA A;  4PG7 A;  5A03 A;  4MIE A;  3LC1 O;  1EBF A;  2YYY A;  1LC0 A;  2XF8 A;  3WYC A;  3KSD O;  2CVO A;  3ING A;  1H6B A;  3V2U A;  1NBO A;  2GZ3 A;  3STH A;  3DTY A;  4P8R A;  1H9B A;  2EJW A;  3RVD A;  3NTR A;  3B20 A;  4MVJ P;  2Q4E A;  3VAZ A;  3L6O O;  2PKQ O;  4JN6 B;  1QKI A;  4MKX A;  3L4S O;  3GFG A;  1IHY A;  4LRS B;  4MIY A;  2QZ9 A;  2G17 A;  1H9A A;  1IHX A;  4XB1 A;  3OA2 A;  2AXQ A;  3NT2 A;  3VOS A;  1P1K A;  4EW6 A;  3KSZ O;  3QY9 A;  2GLX A;  3E6A A;  1DRV A;  1NX6 A;  3OQB A;  1GL3 A;  1S7C A;  1GCU A;  2EP5 A;  1H93 A;  2P2S A;  3HNP A;  3CIN A;  2VYN A;  1GPD G;  1J0X O;  1ML3 A;  3WGY A;  3B1J A;  3WB9 A;  4O59 O;  4NHE A;  1DPG A;  3QVT A;  1PS8 A;  2B4R O;  1E5Q A;  3EUW A;  3E1K A;  1NQA O;  1RM4 A;  3ABI A;  2Q49 A;  3HSK A;  3MTJ A;  1PQP A;  1BRM A;  4R54 A;  2DPG A;  3IP3 A;  1YL5 A;  1NWC A;  4YDR A;  5A04 A;  3QVW A;  2DUU A;  3CEA A;  3B1K A;  5EIO A;  3DMT A;  1YS4 A;  1K3T A;  5JYE A;  4K9D A;  2HJS A;  1H6D A;  3DMT C;  1H94 A;  3JSA A;  4R3W A;  1YL6 A;  2VYV D;  3UW3 A;  5GZ6 A;  1TLT A;  3NTO A;  1DSS G;  1JKI A;  1TB4 A;  3WGQ A;  2GD1 O;  1ZH8 A;  1XEA A;  1LA2 A;  3ZCX A;  1ARZ A;  3LVF O;  5AQ1 A;  1DC3 A;  5A06 A;  3E18 A;  2POQ X;  4MVJ M;  3DB2 A;  1GAD O;  3C1A A;  1T4B A;  1TA4 A;  3QVX A;  3FD8 A;  3BTV A;  1YWG O;  4H3V A;  3F4L A;  1CER A;  3OHS X;  2VYN D;  1LC3 A;  4GMF A;  1VSV A;  3Q1L A;  2I3G A;  3PWS A;  4R5H A;  1H2H A;  3CIF A;  4N54 A;  4F3Y A;  4MVJ I;  1F06 A;  5CEF A;  4MVJ D;  5JYA A;  5A05 A;  3H9E O;  5C7I O;  3WGO A;  4R5M A;  3NT5 A;  3PWK A;  3CMC O;  4XB2 A;  3E9M A;  2DC1 A;  2YV3 A;  1NPT O;  2X5K O;  3TZ6 A;  1VSU A;  1OBF O;  3K9Q O;  3PYL A;  3BIO A;  3MZ0 A;  4Z0H O;  4DPK A;  1DC5 A;  1E7Y A;  4WNI A;  1OFG A;  2BHL A;  3RC1 A;  3RC7 A;  5EER A;  1GD1 O;  3WGZ A;  4KOA A;  1C3V A;  2PKQ P;  3UUW A;  3NT4 A;  3KV3 O;  1HDG O;  5C7O O;  4L9R A;  1VM6 A;  3QW2 A;  2DBV O;  4YWJ A;  1B7G O;  4MVJ G;  3V1Y A;  4LGV A;  5M6D A;  4MVJ E;  1SZJ G;  3LC2 O;  2HO5 A;  1DRU A;  2GYY A;  5GZ1 A;  5EES A;  5JW6 A;  4L8V A;  1VKO A;  2HKI A;  5C7L O;  3EC7 A;  1CF2 O;  3GDO A;  1RM0 A;  3PZR A;  1GR0 A;  5J9G A;  1MC4 A;  3Q11 A;  2X0N A;  4MIO A;  1EVJ A;  4WNC A;  3DAP A;  1I33 A;  1NWH A;  4GPD 1;  4INA A;  1U8F O;  4O63 O;  1Q2X A;  3K73 O;  4R4J A;  1DC4 A;  4PG8 A;  2NVW A;  1MB4 A;  1EBU A;  3IDS A;  4PG6 A;  5EIN A;  2GZ2 A;  4MVJ F;  4R41 A;  1U1I A;  1H6C A;  1E77 A;  4IQ0 A;  3WBF A;  1NQ5 A;  2PKR A;  3DBV O;  3EVN A;  5KVQ A;  2DAP A;  3RC2 A;  4HKT A;  2I3A A;  1OZA A;  2O4U X;  4MKZ A;  4PG5 A;  3PYX A;  4ZIC A;  1DBV O;  1JKF A;  1GYP A;  3LC7 O;  4DBV O;  3V5N A;  1P1I A;  3WBB A;  1FF9 A;  3RC9 A;  5DDI P;  3GPD G;  2VYV A;  2CZC A;  3Q2I A;  5JYF A;  1E5L A;  3M2T A;  1P1H A;  4BOY A;  3PZB A;  3RCB A;  5KVS A;  4LSM A;  1A7K A;  1YL7 A;  1NQO A;  1ZNQ O;  2GZ1 A;  3BTS A;  1RM3 A;  4MJL A;  1XYG A;  2BH9 A;  1DAP A;  1DRW A;  2IXB A;  1NVM B;  4MIN A;  3HQ4 O;  5GZ3 A;  4RL6 A;  3O9Z A;  1H6A A;  3BTU A;  3L0D A;  3PYM A;  3U3X A;  2H63 A;  4MVJ H;  1P1J A;  4GMG A;  5BNT A;  4LRT B;  1J5P A;  2B4T O;  1GYQ A;  3K2B A;  4QX6 A;  2O48 X;  3CPS A;  5A02 A;  3EZY A;  5T73 A;  3HJA A;  1QXS A;  1PU2 A;  3OA0 A;  3I23 A; 
#chains in the Genus database with same CATH topology
 1YDW A;  3HXL A;  3ZJX A;  1Q7G A;  1CRW G;  2EP7 A;  1VKN A;  1P9L A;  4MVJ A;  4DPM A;  2OZP A;  3RBV A;  3FHL A;  5JY6 A;  3QVS A;  2I5P O;  4WOJ A;  4IQ8 A;  3WYB A;  3C8M A;  1T4D A;  1JN0 A;  1VC2 A;  4PG4 A;  1DIH A;  3E5R A;  1RYD A;  3ZDF A;  4FB5 A;  4DPL A;  3QV1 A;  2X5J O;  3DZ6 B;  5AVO A;  1TVE A;  5TVO B;  3NTQ A;  2NQT A;  2R00 A;  3DR3 A;  4R51 A;  1I7M B;  3KUX A;  1PR3 A;  2R00 C;  3Q2K A;  2G82 A;  1P1F A;  3IWD B;  1GAE O;  3DOC A;  3E82 A;  3EP6 B;  4ZHS A;  3DO5 A;  3MOI A;  1DC6 A;  1E7M A;  3IJP A;  4R3N A;  3Q0E A;  3PFW O;  2Q22 A;  1RM5 A;  4GQA A;  4HAD A;  4DIB A;  1RYE A;  2D2I A;  1I32 A;  1PQU A;  3GNQ A;  2IXA A;  4PG7 A;  5A03 A;  4MIE A;  3LC1 O;  1EBF A;  2YYY A;  1LC0 A;  2XF8 A;  3WYC A;  3DZ3 B;  3KSD O;  2CVO A;  3ING A;  1H6B A;  3V2U A;  1NBO A;  2GZ3 A;  3STH A;  3DTY A;  4P8R A;  1H9B A;  2EJW A;  1I7B B;  3RVD A;  3NTR A;  3B20 A;  4MVJ P;  2Q4E A;  4XQE A;  1I79 B;  3VAZ A;  3L6O O;  2PKQ O;  4JN6 B;  1QKI A;  4MKX A;  3L4S O;  3GFG A;  1IHY A;  4LRS B;  3DZ7 B;  4MIY A;  2QZ9 A;  2G17 A;  1H9A A;  1IHX A;  4XB1 A;  3OA2 A;  2AXQ A;  3NT2 A;  3VOS A;  1P1K A;  4EW6 A;  4XQG A;  3KSZ O;  3QY9 A;  2GLX A;  3E6A A;  3TUX A;  1DRV A;  1NX6 A;  3OQB A;  1GL3 A;  3EPA B;  1QMH A;  1I7C B;  1S7C A;  1GCU A;  3DZ4 B;  2EP5 A;  1H93 A;  2P2S A;  3HNP A;  3CIN A;  3TUT A;  2VYN A;  1GPD G;  1J0X O;  1ML3 A;  3WGY A;  3B1J A;  3WB9 A;  3EP5 B;  4O59 O;  4NHE A;  1DPG A;  3QVT A;  1PS8 A;  2B4R O;  1E5Q A;  3EUW A;  4XQC A;  3E1K A;  4PLP A;  1NQA O;  1RM4 A;  3ABI A;  2Q49 A;  3HSK A;  3MTJ A;  1PQP A;  1BRM A;  4R54 A;  2DPG A;  4XR4 A;  3IP3 A;  1YL5 A;  1NWC A;  4YDR A;  5A04 A;  3QVW A;  2DUU A;  3CEA A;  3B1K A;  5EIO A;  2PH5 A;  4AK1 A;  3DMT A;  1YS4 A;  1K3T A;  3KGD A;  5JYE A;  4K9D A;  2HJS A;  1H6D A;  3DMT C;  1H94 A;  3JSA A;  4R3W A;  1YL6 A;  2VYV D;  3UW3 A;  5GZ6 A;  1TLT A;  3NTO A;  1UYJ A;  4TVB A;  3H0W B;  1DSS G;  1JKI A;  1TB4 A;  3WGQ A;  2GD1 O;  1ZH8 A;  1XEA A;  3PQV A;  3DZ5 B;  1LA2 A;  3ZCX A;  1ARZ A;  3LVF O;  5AQ1 A;  1DC3 A;  5A06 A;  1QMI A;  3E18 A;  2POQ X;  4MVJ M;  3EP9 B;  3DB2 A;  1GAD O;  3C1A A;  1T4B A;  1TA4 A;  3QVX A;  3FD8 A;  4CLQ A;  3BTV A;  1YWG O;  4H3V A;  3F4L A;  1CER A;  3OHS X;  2VYN D;  1LC3 A;  4GMF A;  1VSV A;  3Q1L A;  2I3G A;  3EP4 B;  3PWS A;  3EPB B;  4R5H A;  1H2H A;  3CIF A;  4N54 A;  3IWC B;  4F3Y A;  4MVJ I;  1F06 A;  5CEF A;  4MVJ D;  5JYA A;  5A05 A;  3H9E O;  5C7I O;  3WGO A;  4R5M A;  3NT5 A;  3PWK A;  3CMC O;  4XB2 A;  3E9M A;  2DC1 A;  2YV3 A;  1NPT O;  2X5K O;  3TZ6 A;  1VSU A;  1OBF O;  3K9Q O;  3PYL A;  3BIO A;  3MZ0 A;  4Z0H O;  4DPK A;  1DC5 A;  1E7Y A;  4WNI A;  4O89 A;  1OFG A;  2BHL A;  3RC1 A;  3RC7 A;  5EER A;  1GD1 O;  3WGZ A;  4KOA A;  1C3V A;  2PKQ P;  3UUW A;  3NT4 A;  3KV3 O;  1HDG O;  5C7O O;  4L9R A;  1VM6 A;  3QW2 A;  2DBV O;  4YWJ A;  1I72 B;  1B7G O;  4MVJ G;  3V1Y A;  4LGV A;  5M6D A;  4MVJ E;  1SZJ G;  3LC2 O;  2HO5 A;  1DRU A;  2GYY A;  4XQ9 A;  1JEN B;  5GZ1 A;  5EES A;  3TV1 A;  5JW6 A;  4II7 A;  4L8V A;  1VKO A;  2HKI A;  5C7L O;  3EC7 A;  1CF2 O;  3GDO A;  1RM0 A;  3PZR A;  3H0V B;  1GR0 A;  5J9G A;  1MC4 A;  3Q11 A;  2X0N A;  4MIO A;  1EVJ A;  4WNC A;  3DAP A;  1I33 A;  1NWH A;  4GPD 1;  4INA A;  1U8F O;  4O63 O;  1Q2X A;  3K73 O;  4R4J A;  4XRG A;  1DC4 A;  4PG8 A;  2NVW A;  1MB4 A;  4O8J A;  3DZ2 B;  1EBU A;  3IDS A;  4PG6 A;  5EIN A;  2GZ2 A;  4MVJ F;  4R41 A;  1U1I A;  1H6C A;  1E77 A;  4IQ0 A;  3WBF A;  1NQ5 A;  2PKR A;  3DBV O;  3EVN A;  5KVQ A;  2DAP A;  3RC2 A;  4HKT A;  2I3A A;  1OZA A;  2O4U X;  4MKZ A;  4PG5 A;  3PYX A;  4ZIC A;  1DBV O;  1JKF A;  1GYP A;  3LC7 O;  4DBV O;  3V5N A;  1P1I A;  3WBB A;  1FF9 A;  3RC9 A;  5DDI P;  3GPD G;  2VYV A;  2CZC A;  3Q2I A;  5JYF A;  1E5L A;  3M2T A;  1P1H A;  4BOY A;  3TW3 A;  3PZB A;  2FPN A;  3RCB A;  5KVS A;  4LSM A;  1A7K A;  1MHM B;  1YL7 A;  1NQO A;  1ZNQ O;  2GZ1 A;  3BTS A;  1RM3 A;  4MJL A;  1XYG A;  2BH9 A;  1DAP A;  1DRW A;  2IXB A;  1NVM B;  4MIN A;  3HQ4 O;  5GZ3 A;  4RL6 A;  3O9Z A;  1H6A A;  3BTU A;  3L0D A;  3PYM A;  3U3X A;  2H63 A;  4MVJ H;  1P1J A;  4GMG A;  5BNT A;  3EP8 B;  4LRT B;  1J5P A;  2B4T O;  1GYQ A;  3K2B A;  4QX6 A;  2O48 X;  3CPS A;  5A02 A;  3EP3 B;  3EZY A;  3EP7 B;  5T73 A;  3HJA A;  1QXS A;  3IWB B;  1PU2 A;  3OA0 A;  3I23 A; 
#chains in the Genus database with same CATH homology
 1YDW A;  3HXL A;  3ZJX A;  1Q7G A;  1CRW G;  2EP7 A;  1VKN A;  1P9L A;  4MVJ A;  4DPM A;  2OZP A;  3RBV A;  3FHL A;  5JY6 A;  3QVS A;  2I5P O;  4WOJ A;  4IQ8 A;  3WYB A;  3C8M A;  1T4D A;  1JN0 A;  1VC2 A;  4PG4 A;  1DIH A;  3E5R A;  1RYD A;  3ZDF A;  4FB5 A;  4DPL A;  3QV1 A;  2X5J O;  5AVO A;  1TVE A;  3NTQ A;  2NQT A;  2R00 A;  3DR3 A;  4R51 A;  3KUX A;  1PR3 A;  2R00 C;  3Q2K A;  2G82 A;  1P1F A;  3IWD B;  1GAE O;  3DOC A;  3E82 A;  4ZHS A;  3DO5 A;  3MOI A;  1DC6 A;  1E7M A;  3IJP A;  4R3N A;  3Q0E A;  3PFW O;  2Q22 A;  1RM5 A;  4HAD A;  4GQA A;  4DIB A;  1RYE A;  2D2I A;  1I32 A;  1PQU A;  3GNQ A;  2IXA A;  4PG7 A;  5A03 A;  4MIE A;  3LC1 O;  1EBF A;  2YYY A;  1LC0 A;  2XF8 A;  3WYC A;  3KSD O;  2CVO A;  3ING A;  1H6B A;  3V2U A;  1NBO A;  2GZ3 A;  3STH A;  3DTY A;  4P8R A;  1H9B A;  2EJW A;  3RVD A;  3NTR A;  3B20 A;  4MVJ P;  2Q4E A;  3VAZ A;  3L6O O;  2PKQ O;  4JN6 B;  1QKI A;  4MKX A;  3L4S O;  3GFG A;  1IHY A;  4LRS B;  4MIY A;  2QZ9 A;  2G17 A;  1H9A A;  1IHX A;  4XB1 A;  3OA2 A;  2AXQ A;  3NT2 A;  3VOS A;  1P1K A;  4EW6 A;  3KSZ O;  3QY9 A;  2GLX A;  3E6A A;  3TUX A;  1DRV A;  1NX6 A;  3OQB A;  1GL3 A;  1QMH A;  1S7C A;  1GCU A;  2EP5 A;  1H93 A;  2P2S A;  3HNP A;  3CIN A;  3TUT A;  2VYN A;  1GPD G;  1J0X O;  1ML3 A;  3WGY A;  3B1J A;  3WB9 A;  4O59 O;  4NHE A;  1DPG A;  3QVT A;  1PS8 A;  2B4R O;  1E5Q A;  3EUW A;  3E1K A;  1NQA O;  1RM4 A;  3ABI A;  2Q49 A;  3HSK A;  3MTJ A;  1PQP A;  1BRM A;  4R54 A;  2DPG A;  3IP3 A;  1YL5 A;  1NWC A;  4YDR A;  5A04 A;  3QVW A;  2DUU A;  3CEA A;  3B1K A;  5EIO A;  4AK1 A;  3DMT A;  1YS4 A;  1K3T A;  3KGD A;  5JYE A;  4K9D A;  2HJS A;  1H6D A;  3DMT C;  1H94 A;  3JSA A;  4R3W A;  1YL6 A;  2VYV D;  3UW3 A;  5GZ6 A;  1TLT A;  3NTO A;  1UYJ A;  1DSS G;  1JKI A;  1TB4 A;  3WGQ A;  2GD1 O;  1ZH8 A;  1XEA A;  3PQV A;  1LA2 A;  3ZCX A;  1ARZ A;  3LVF O;  5AQ1 A;  1DC3 A;  5A06 A;  1QMI A;  3E18 A;  2POQ X;  4MVJ M;  3DB2 A;  1GAD O;  3C1A A;  1T4B A;  1TA4 A;  3QVX A;  3FD8 A;  4CLQ A;  3BTV A;  1YWG O;  4H3V A;  3F4L A;  1CER A;  3OHS X;  2VYN D;  1LC3 A;  4GMF A;  1VSV A;  3Q1L A;  2I3G A;  3PWS A;  4R5H A;  1H2H A;  3CIF A;  4N54 A;  3IWC B;  4F3Y A;  4MVJ I;  1F06 A;  5CEF A;  4MVJ D;  5JYA A;  5A05 A;  3H9E O;  5C7I O;  3WGO A;  4R5M A;  3NT5 A;  3PWK A;  3CMC O;  4XB2 A;  3E9M A;  2DC1 A;  2YV3 A;  1NPT O;  2X5K O;  3TZ6 A;  1VSU A;  1OBF O;  3K9Q O;  3PYL A;  3BIO A;  3MZ0 A;  4Z0H O;  4DPK A;  1DC5 A;  1E7Y A;  4WNI A;  4O89 A;  1OFG A;  2BHL A;  3RC1 A;  3RC7 A;  5EER A;  1GD1 O;  3WGZ A;  4KOA A;  1C3V A;  2PKQ P;  3UUW A;  3NT4 A;  3KV3 O;  1HDG O;  5C7O O;  4L9R A;  1VM6 A;  3QW2 A;  2DBV O;  4YWJ A;  1B7G O;  4MVJ G;  3V1Y A;  4LGV A;  5M6D A;  4MVJ E;  1SZJ G;  3LC2 O;  2HO5 A;  1DRU A;  2GYY A;  5GZ1 A;  5EES A;  3TV1 A;  5JW6 A;  4II7 A;  4L8V A;  1VKO A;  2HKI A;  5C7L O;  3EC7 A;  1CF2 O;  3GDO A;  1RM0 A;  3PZR A;  1GR0 A;  5J9G A;  1MC4 A;  3Q11 A;  2X0N A;  4MIO A;  1EVJ A;  4WNC A;  3DAP A;  1I33 A;  1NWH A;  4GPD 1;  4INA A;  1U8F O;  4O63 O;  1Q2X A;  3K73 O;  4R4J A;  1DC4 A;  4PG8 A;  2NVW A;  1MB4 A;  4O8J A;  1EBU A;  3IDS A;  4PG6 A;  5EIN A;  2GZ2 A;  4MVJ F;  4R41 A;  1U1I A;  1H6C A;  1E77 A;  4IQ0 A;  3WBF A;  1NQ5 A;  2PKR A;  3DBV O;  3EVN A;  5KVQ A;  2DAP A;  3RC2 A;  4HKT A;  2I3A A;  1OZA A;  2O4U X;  4MKZ A;  4PG5 A;  3PYX A;  4ZIC A;  1DBV O;  1JKF A;  1GYP A;  3LC7 O;  4DBV O;  3V5N A;  1P1I A;  3WBB A;  1FF9 A;  3RC9 A;  5DDI P;  3GPD G;  2VYV A;  2CZC A;  3Q2I A;  5JYF A;  1E5L A;  3M2T A;  1P1H A;  4BOY A;  3TW3 A;  3PZB A;  3RCB A;  5KVS A;  4LSM A;  1A7K A;  1YL7 A;  1NQO A;  1ZNQ O;  2GZ1 A;  3BTS A;  1RM3 A;  4MJL A;  1XYG A;  2BH9 A;  1DAP A;  1DRW A;  2IXB A;  1NVM B;  4MIN A;  3HQ4 O;  5GZ3 A;  4RL6 A;  3O9Z A;  1H6A A;  3BTU A;  3L0D A;  3PYM A;  3U3X A;  2H63 A;  4MVJ H;  1P1J A;  4GMG A;  5BNT A;  4LRT B;  1J5P A;  2B4T O;  1GYQ A;  3K2B A;  4QX6 A;  2O48 X;  3CPS A;  5A02 A;  3EZY A;  5T73 A;  3HJA A;  1QXS A;  3IWB B;  1PU2 A;  3OA0 A;  3I23 A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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5JYAA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations