2M6Q | Genus

Total Genus 16

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	16
sequence length	91
structure length	91
Chain Sequence	MKIISISETPNHNTMKITLSESREGMTSDTYTKVDDSQPAFINDILKVEGVKSIFHVMDFISVDKENDANWETVLPKVEAVFELEHHHHHH

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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The Resolver thinks Pdb

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reading 91 atoms

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91 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Unknown function
source organism	Staphylococcus aureus subsp. aureus
publication title	PDBStat: a universal restraint converter and restraint analysis software package for protein NMR. pubmed doi rcsb
molecule keywords	SAV1430
total genus	16
structure length	91
sequence length	91
ec nomenclature
pdb deposition date	2013-04-08

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF08712	Nfu_N	Scaffold protein Nfu/NifU N terminal

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.1370.70	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8; Chain: A, domain 1	Scaffold protein Nfu/NifU, N-terminal domain	2m6qA00

2LTLA 1PQXA 2LTMA 2K1HA 2M8WA 2M6QA 2FFMA
chains in the Genus database with same CATH superfamily

4WANA 4PDBA 2CWHA 4LIJA 4NXMH 1DT4A 4JI3H 1EC6A 5IT9W 2JE6I 5DT9A 1HNWH 4NXNH 1ZTGA 2BA0A 1WE8A 4OD6A 1IBMH 4KHPH 2UUCH 3GR5A 3AEVB 5BR8H 2VKCA 2Z0SA 2MJHA 4OO1G 4LF4H 3VKEA 4YHHH 3GKUA 2D9IA 4LFBH 3SB1A 2Y3MA 2VQFH 4B8CD 1DTJA 4LF9H 3JAMW 4BA1I 2E5LH 1ZZIA 1WTJA 4GKKH 4OCHA 1WVNA 3I0PA 1VBIA 4E9JA 1SEIA 1ODHA 1XMQH 4OX9H 1HNXH 4IFDG 3QD7X 1X9ZA 4DV6H 2JZXA 4X64H 2PQUA 2CPMA 1PQXA 1J4WA 2CTKA 5LL6b 4K0KH 4B3MH 4AM3A 4X65H 2HH2A 1S03G 5IWAH 3OETA 5K36G 4EC5A 2FPHX 3U1KA 4JV5H 3T1YH 4JI5H 2LF0A 2UXBH 1AN7A 1J5KA 4LFAH 2VQEH 4B3RH 1S20A 2CTFA 4JI2H 4YY3H 4X66H 4LF7H 3FAUA 2YQRA 4LF6H 4DR6H 5LMUH 1X4NA 1VIHA 2M8WA 5FLXW 2P2RA 3KDKA 4JYAH 3OTOH 5JEAG 4DV3H 1FKAH 4DV0H 4H8AA 4DV2H 2ZQEA 1FJGH 1X0AA 3NCVA 2FMRA 4DR2H 1XMOH 4DV1H 3EZJA 3KDGA 4FJUA 1J5EH 3UOEA 4BA2I 4DUYH 2LTMA 1N36H 2ZM6H 1WHRA 4X62H 4JI1H 1I94H 2JEBI 3V69A 2PY9A 1XNRH 1Z2IA 2HH3A 4NZRM 4AIMA 2OPVA 2NN6G 2A1SA 1NXUA 1VIGA 2CTLA 2O4CA 4NZTM 4DR3H 4JI6H 4JVYA 2HHHH 2FFMA 4B8TA 4JI4H 1KHMA 2JVZA 4DV4H 2CTJA 2CWFA 3J80W 2LTLA 4DV5H 1ZZJA 4B3TH 4DR7H 4QMFB 2BL5A 2DGRA 1XRHA 4B3SH 4JI8H 5LMNH 1IBLH 2F4VH 1I6UA 4NBQA 4WALA 4LF5H 4AQYH 1V8CA 3T1HH 2PT7G 1UG8A 2M6QA 2E3UA 4LFCH 1N33H 2ANRA 4JVHA 4LF8H 2ANNA 2CTEA 3J7AK 2UUBH 2K1HA 2QNDA 1HNZH 2JEAI 3OSSD 1ZZKA 4FJSA 2UXDH 1N32H 2LRRA 1K1GA 1IBKH 2JA9A 4DR5H 4DR4H 2UU9H 4JI7H 2CPQA 4DV7H 1N34H 3RF2A 2UUAH 2G8YA 2CTMA 2AXYA 2UXCH 4DUZH 1TUAA 4JI0H 5A2QW 2OPUA 5C0XG 1XNQH 1X4MA 1MSZA 4DR1H 1V9NA 2X06A 4G08A 3GABA 1HR0H 3L7ZC 4GKJH 1F0XA 3J81W
chains in the Genus database with same CATH topology

2LTLA 1PQXA 2LTMA 2K1HA 2M8WA 2M6QA 2FFMA
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 2LTL A;  1PQX A;  2LTM A;  2K1H A;  2M8W A;  2M6Q A;  2FFM A; 
#chains in the Genus database with same CATH topology
 4WAN A;  4PDB A;  2CWH A;  4LIJ A;  4NXM H;  1DT4 A;  4JI3 H;  1EC6 A;  5IT9 W;  2JE6 I;  5DT9 A;  1HNW H;  4NXN H;  1ZTG A;  2BA0 A;  1WE8 A;  4OD6 A;  1IBM H;  4KHP H;  2UUC H;  3GR5 A;  3AEV B;  5BR8 H;  2VKC A;  2Z0S A;  2MJH A;  4OO1 G;  4LF4 H;  3VKE A;  4YHH H;  3GKU A;  2D9I A;  4LFB H;  3SB1 A;  2Y3M A;  2VQF H;  4B8C D;  1DTJ A;  4LF9 H;  3JAM W;  4BA1 I;  2E5L H;  1ZZI A;  1WTJ A;  4GKK H;  4OCH A;  1WVN A;  3I0P A;  1VBI A;  4E9J A;  1SEI A;  1ODH A;  1XMQ H;  4OX9 H;  1HNX H;  4IFD G;  3QD7 X;  1X9Z A;  4DV6 H;  2JZX A;  4X64 H;  2PQU A;  2CPM A;  1PQX A;  1J4W A;  2CTK A;  5LL6 b;  4K0K H;  4B3M H;  4AM3 A;  4X65 H;  2HH2 A;  1S03 G;  5IWA H;  3OET A;  5K36 G;  4EC5 A;  2FPH X;  3U1K A;  4JV5 H;  3T1Y H;  4JI5 H;  2LF0 A;  2UXB H;  1AN7 A;  1J5K A;  4LFA H;  2VQE H;  4B3R H;  1S20 A;  2CTF A;  4JI2 H;  4YY3 H;  4X66 H;  4LF7 H;  3FAU A;  2YQR A;  4LF6 H;  4DR6 H;  5LMU H;  1X4N A;  1VIH A;  2M8W A;  5FLX W;  2P2R A;  3KDK A;  4JYA H;  3OTO H;  5JEA G;  4DV3 H;  1FKA H;  4DV0 H;  4H8A A;  4DV2 H;  2ZQE A;  1FJG H;  1X0A A;  3NCV A;  2FMR A;  4DR2 H;  1XMO H;  4DV1 H;  3EZJ A;  3KDG A;  4FJU A;  1J5E H;  3UOE A;  4BA2 I;  4DUY H;  2LTM A;  1N36 H;  2ZM6 H;  1WHR A;  4X62 H;  4JI1 H;  1I94 H;  2JEB I;  3V69 A;  2PY9 A;  1XNR H;  1Z2I A;  2HH3 A;  4NZR M;  4AIM A;  2OPV A;  2NN6 G;  2A1S A;  1NXU A;  1VIG A;  2CTL A;  2O4C A;  4NZT M;  4DR3 H;  4JI6 H;  4JVY A;  2HHH H;  2FFM A;  4B8T A;  4JI4 H;  1KHM A;  2JVZ A;  4DV4 H;  2CTJ A;  2CWF A;  3J80 W;  2LTL A;  4DV5 H;  1ZZJ A;  4B3T H;  4DR7 H;  4QMF B;  2BL5 A;  2DGR A;  1XRH A;  4B3S H;  4JI8 H;  5LMN H;  1IBL H;  2F4V H;  1I6U A;  4NBQ A;  4WAL A;  4LF5 H;  4AQY H;  1V8C A;  3T1H H;  2PT7 G;  1UG8 A;  2M6Q A;  2E3U A;  4LFC H;  1N33 H;  2ANR A;  4JVH A;  4LF8 H;  2ANN A;  2CTE A;  3J7A K;  2UUB H;  2K1H A;  2QND A;  1HNZ H;  2JEA I;  3OSS D;  1ZZK A;  4FJS A;  2UXD H;  1N32 H;  2LRR A;  1K1G A;  1IBK H;  2JA9 A;  4DR5 H;  4DR4 H;  2UU9 H;  4JI7 H;  2CPQ A;  4DV7 H;  1N34 H;  3RF2 A;  2UUA H;  2G8Y A;  2CTM A;  2AXY A;  2UXC H;  4DUZ H;  1TUA A;  4JI0 H;  5A2Q W;  2OPU A;  5C0X G;  1XNQ H;  1X4M A;  1MSZ A;  4DR1 H;  1V9N A;  2X06 A;  4G08 A;  3GAB A;  1HR0 H;  3L7Z C;  4GKJ H;  1F0X A;  3J81 W; 
#chains in the Genus database with same CATH homology
 2LTL A;  1PQX A;  2LTM A;  2K1H A;  2M8W A;  2M6Q A;  2FFM A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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2M6QA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations