1MBBA

Oxidoreductase
Total Genus 100
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
100
sequence length
340
structure length
340
Chain Sequence
HSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLEDYRGTVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKLPDPKVNGNAGSFFKNPVVSAETAKALLSQFPTAPNYPQADGSVKLAAGWLIDQCQLKGMQIGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGEVSAVETIS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title (E)-enolbutyryl-UDP-N-acetylglucosamine as a mechanistic probe of UDP-N-acetylenolpyruvylglucosamine reductase (MurB).
pubmed doi rcsb
molecule tags Oxidoreductase
molecule keywords URIDINE DIPHOSPHO-N-ACETYLENOLPYRUVYLGLUCOSAMINE REDUCTASE
total genus 100
structure length 340
sequence length 340
ec nomenclature ec 1.3.1.98: UDP-N-acetylmuramate dehydrogenase.
pdb deposition date 1995-11-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF02873 MurB_C UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 1mbbA02
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 1mbbA03
3.90.78.10 Alpha Beta Alpha-Beta Complex Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 1 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 1mbbA01
1AHZA 1W1OA 3S1CA 2P3HA 1WVEA 4DNSA 3HRDC 1WVFA 5D79A 4BCAA 1W1JA 2NQWA 1N63C 3S1DA 2RK5A 2O3GA 3D2JA 1AHUA 4BC7A 3EUB3 3NVVB 3BW7A 4PVHA 3FW7A 3AN1A 4PVJA 1DIQA 1W1LA 1QLUA 4BC9A 2QKNA 3TX1A 4EC3A 4OALA 1WYGA 3PM9A 4UD8A 2W54A 1SB3B 4HG0A 2BVHA 2AXRA 5FXDA 1JROA 2E3TA 5ADZA 1E8FA 1N62C 1W1QA 4PWBA 1N5XA 1W1KA 1UXYA 5HMRA 5HHZA 2YVSA 2P4PA 2P13A 2R8DA 1N61C 1MBBA 3ETRB 2I0KA 3D2DA 4JAYA 1FFVC 4O95A 1QLTA 2W55A 2R2ZA 1VDVA 5AE1A 3GSYA 2BVFA 3FW8A 3LLBA 1E0YA 5FXEA 3W8WA 3W8ZA 3FW9A 5FXPA 1FFUC 1F0XA 1I19A 4ZOHB 2VAOA 2GQTA 3DEDA 4ML8A 3AMZA 5AE2A 1VAOA 2Q4WA 4PVEA 2VFVA 3AM9A 3I99A 1N60C 3NVZB 1N5WC 4XLOA 1DIIA 2GQUA 3TSHA 1ZXIC 4JB1A 3SR6B 1ZR6A 2BVGA 2PLSA 4PVKA 2W3RA 3W8XA 2W3SA 3JS8A 2QPMA 1AHVA 5AE3A 5G5GB 2VFUA 1W1SA 3KJMA 3NVYB 3D2HA 3S1FA 5HQXA 3FWAA 2PLIA 2MBRA 1W1RA 1FO4A 4MLAA 1DZNA 1HSKA 4PYTA 3B9JB 3C0PA 2OAIA 1MBTA 1V97A 4PWCA 2VFTA 3NVWB 1E8GA 2VFRA 5G5HB 5FXFA 1FIQB 1RM6B 1JRPA 2Q85A 2EXRA 3S1EA 3NS1B 3NRZB 3DQ0A 2VFSA 1W1MA 4BBYA 4PZFA 3VTEA 3TSJA 1E8HA 1T3QC 3LAEA
chains in the Genus database with same CATH superfamily
1AHZA 1W1OA 3S1CA 2P3HA 1WVEA 4DNSA 3HRDC 1WVFA 5D79A 4BCAA 1W1JA 2NQWA 1N63C 5L6FA 3S1DA 2RK5A 2O3GA 3D2JA 3EJBB 1AHUA 3NVVB 3EUB3 4BC7A 2Y08A 3BW7A 3RJAA 4PVHA 3FW7A 2Y3SA 3AN1A 4PVJA 1DIQA 1W1LA 5I1WA 1QLUA 4BC9A 2Y3RA 2QKNA 3TX1A 4EC3A 4OALA 1WYGA 3PM9A 3EJEB 2UUVA 3EJDB 4UD8A 2W54A 1SB3B 4HG0A 2BVHA 2AXRA 3POPA 5FXDA 1JROA 2E3TA 5ADZA 1E8FA 1N62C 1W1QA 4PWBA 1N5XA 1W1KA 1UXYA 5HMRA 5HHZA 2Y4GA 2YVSA 2P4PA 2P13A 5K8EA 2R8DA 1N61C 1MBBA 3ETRB 2I0KA 3D2DA 4JAYA 1FFVC 4O95A 1QLTA 2W55A 2R2ZA 1VDVA 5AE1A 3GSYA 2BVFA 3FW8A 3LLBA 1E0YA 5FXEA 3W8WA 3W8ZA 3FW9A 5FXPA 1FFUC 2UUUA 1F0XA 1I19A 4ZOHB 2VAOA 2GQTA 2WDWA 3DEDA 3HSUA 4ML8A 3AMZA 5AE2A 2IPIA 1VAOA 2Q4WA 4PVEA 2VFVA 3AM9A 3I99A 1N60C 3NVZB 1N5WC 4XLOA 1DIIA 2GQUA 3TSHA 1ZXIC 4JB1A 3SR6B 1ZR6A 2BVGA 2PLSA 4PVKA 2W3RA 3W8XA 2W3SA 3JS8A 2QPMA 1AHVA 5AE3A 5G5GB 2VFUA 1W1SA 3KJMA 3NVYB 3D2HA 3PQBA 3S1FA 5I1VA 5HQXA 3FWAA 2PLIA 2MBRA 1W1RA 1FO4A 5L6GA 4MLAA 1DZNA 1HSKA 4PYTA 3B9JB 3C0PA 2OAIA 1MBTA 1V97A 3NVWB 2VFTA 4PWCA 1E8GA 2VFRA 5G5HB 5FXFA 1FIQB 1RM6B 1JRPA 2Q85A 2EXRA 3RJ8A 3S1EA 3NS1B 3NRZB 3DQ0A 2VFSA 1W1MA 4BBYA 4PZFA 3VTEA 5AWVA 3TSJA 1E8HA 1T3QC 3LAEA
chains in the Genus database with same CATH topology
1AHZA 1W1OA 3S1CA 2P3HA 1WVEA 4DNSA 3HRDC 1WVFA 5D79A 4BCAA 1W1JA 2NQWA 1N63C 5L6FA 3S1DA 2RK5A 2O3GA 3D2JA 1AHUA 4BC7A 3EUB3 2Y08A 3NVVB 3BW7A 3RJAA 4PVHA 3FW7A 2Y3SA 3AN1A 4PVJA 1DIQA 1W1LA 5I1WA 1QLUA 4BC9A 2Y3RA 2QKNA 3TX1A 4EC3A 4OALA 1WYGA 3PM9A 2UUVA 4UD8A 2W54A 1SB3B 4HG0A 2BVHA 2AXRA 3POPA 5FXDA 1JROA 2E3TA 5ADZA 1E8FA 1N62C 1W1QA 4PWBA 1N5XA 1W1KA 1UXYA 5HMRA 5HHZA 2Y4GA 2YVSA 2P4PA 2P13A 5K8EA 2R8DA 1N61C 1MBBA 3ETRB 2I0KA 3D2DA 4JAYA 1FFVC 4O95A 1QLTA 2W55A 2R2ZA 1VDVA 5AE1A 3GSYA 2BVFA 3FW8A 3LLBA 1E0YA 5FXEA 3W8WA 3W8ZA 3FW9A 5FXPA 1FFUC 2UUUA 1F0XA 1I19A 4ZOHB 2VAOA 2GQTA 2WDWA 3DEDA 3HSUA 4ML8A 3AMZA 5AE2A 2IPIA 1VAOA 2Q4WA 4PVEA 2VFVA 3AM9A 3I99A 1N60C 3NVZB 1N5WC 4XLOA 1DIIA 2GQUA 3TSHA 1ZXIC 4JB1A 3SR6B 1ZR6A 2BVGA 2PLSA 4PVKA 2W3RA 3W8XA 2W3SA 3JS8A 2QPMA 1AHVA 5AE3A 5G5GB 2VFUA 1W1SA 3KJMA 3NVYB 3D2HA 3PQBA 3S1FA 5I1VA 5HQXA 3FWAA 2PLIA 2MBRA 1W1RA 1FO4A 5L6GA 4MLAA 1DZNA 1HSKA 4PYTA 3B9JB 3C0PA 2OAIA 1MBTA 1V97A 4PWCA 2VFTA 3NVWB 1E8GA 2VFRA 5G5HB 5FXFA 1FIQB 1RM6B 1JRPA 2Q85A 2EXRA 3RJ8A 3S1EA 3NS1B 3NRZB 3DQ0A 2VFSA 1W1MA 4BBYA 4PZFA 3VTEA 5AWVA 3TSJA 1E8HA 1T3QC 3LAEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1AHZ A;  1W1O A;  3S1C A;  2P3H A;  1WVE A;  4DNS A;  3HRD C;  1WVF A;  5D79 A;  4BCA A;  1W1J A;  2NQW A;  1N63 C;  3S1D A;  2RK5 A;  2O3G A;  3D2J A;  1AHU A;  4BC7 A;  3EUB 3;  3NVV B;  3BW7 A;  4PVH A;  3FW7 A;  3AN1 A;  4PVJ A;  1DIQ A;  1W1L A;  1QLU A;  4BC9 A;  2QKN A;  3TX1 A;  4EC3 A;  4OAL A;  1WYG A;  3PM9 A;  4UD8 A;  2W54 A;  1SB3 B;  4HG0 A;  2BVH A;  2AXR A;  5FXD A;  1JRO A;  2E3T A;  5ADZ A;  1E8F A;  1N62 C;  1W1Q A;  4PWB A;  1N5X A;  1W1K A;  1UXY A;  5HMR A;  5HHZ A;  2YVS A;  2P4P A;  2P13 A;  2R8D A;  1N61 C;  1MBB A;  3ETR B;  2I0K A;  3D2D A;  4JAY A;  1FFV C;  4O95 A;  1QLT A;  2W55 A;  2R2Z A;  1VDV A;  5AE1 A;  3GSY A;  2BVF A;  3FW8 A;  3LLB A;  1E0Y A;  5FXE A;  3W8W A;  3W8Z A;  3FW9 A;  5FXP A;  1FFU C;  1F0X A;  1I19 A;  4ZOH B;  2VAO A;  2GQT A;  3DED A;  4ML8 A;  3AMZ A;  5AE2 A;  1VAO A;  2Q4W A;  4PVE A;  2VFV A;  3AM9 A;  3I99 A;  1N60 C;  3NVZ B;  1N5W C;  4XLO A;  1DII A;  2GQU A;  3TSH A;  1ZXI C;  4JB1 A;  3SR6 B;  1ZR6 A;  2BVG A;  2PLS A;  4PVK A;  2W3R A;  3W8X A;  2W3S A;  3JS8 A;  2QPM A;  1AHV A;  5AE3 A;  5G5G B;  2VFU A;  1W1S A;  3KJM A;  3NVY B;  3D2H A;  3S1F A;  5HQX A;  3FWA A;  2PLI A;  2MBR A;  1W1R A;  1FO4 A;  4MLA A;  1DZN A;  1HSK A;  4PYT A;  3B9J B;  3C0P A;  2OAI A;  1MBT A;  1V97 A;  4PWC A;  2VFT A;  3NVW B;  1E8G A;  2VFR A;  5G5H B;  5FXF A;  1FIQ B;  1RM6 B;  1JRP A;  2Q85 A;  2EXR A;  3S1E A;  3NS1 B;  3NRZ B;  3DQ0 A;  2VFS A;  1W1M A;  4BBY A;  4PZF A;  3VTE A;  3TSJ A;  1E8H A;  1T3Q C;  3LAE A; 
#chains in the Genus database with same CATH topology
 1AHZ A;  1W1O A;  3S1C A;  2P3H A;  1WVE A;  4DNS A;  3HRD C;  1WVF A;  5D79 A;  4BCA A;  1W1J A;  2NQW A;  1N63 C;  5L6F A;  3S1D A;  2RK5 A;  2O3G A;  3D2J A;  3EJB B;  1AHU A;  3NVV B;  3EUB 3;  4BC7 A;  2Y08 A;  3BW7 A;  3RJA A;  4PVH A;  3FW7 A;  2Y3S A;  3AN1 A;  4PVJ A;  1DIQ A;  1W1L A;  5I1W A;  1QLU A;  4BC9 A;  2Y3R A;  2QKN A;  3TX1 A;  4EC3 A;  4OAL A;  1WYG A;  3PM9 A;  3EJE B;  2UUV A;  3EJD B;  4UD8 A;  2W54 A;  1SB3 B;  4HG0 A;  2BVH A;  2AXR A;  3POP A;  5FXD A;  1JRO A;  2E3T A;  5ADZ A;  1E8F A;  1N62 C;  1W1Q A;  4PWB A;  1N5X A;  1W1K A;  1UXY A;  5HMR A;  5HHZ A;  2Y4G A;  2YVS A;  2P4P A;  2P13 A;  5K8E A;  2R8D A;  1N61 C;  1MBB A;  3ETR B;  2I0K A;  3D2D A;  4JAY A;  1FFV C;  4O95 A;  1QLT A;  2W55 A;  2R2Z A;  1VDV A;  5AE1 A;  3GSY A;  2BVF A;  3FW8 A;  3LLB A;  1E0Y A;  5FXE A;  3W8W A;  3W8Z A;  3FW9 A;  5FXP A;  1FFU C;  2UUU A;  1F0X A;  1I19 A;  4ZOH B;  2VAO A;  2GQT A;  2WDW A;  3DED A;  3HSU A;  4ML8 A;  3AMZ A;  5AE2 A;  2IPI A;  1VAO A;  2Q4W A;  4PVE A;  2VFV A;  3AM9 A;  3I99 A;  1N60 C;  3NVZ B;  1N5W C;  4XLO A;  1DII A;  2GQU A;  3TSH A;  1ZXI C;  4JB1 A;  3SR6 B;  1ZR6 A;  2BVG A;  2PLS A;  4PVK A;  2W3R A;  3W8X A;  2W3S A;  3JS8 A;  2QPM A;  1AHV A;  5AE3 A;  5G5G B;  2VFU A;  1W1S A;  3KJM A;  3NVY B;  3D2H A;  3PQB A;  3S1F A;  5I1V A;  5HQX A;  3FWA A;  2PLI A;  2MBR A;  1W1R A;  1FO4 A;  5L6G A;  4MLA A;  1DZN A;  1HSK A;  4PYT A;  3B9J B;  3C0P A;  2OAI A;  1MBT A;  1V97 A;  3NVW B;  2VFT A;  4PWC A;  1E8G A;  2VFR A;  5G5H B;  5FXF A;  1FIQ B;  1RM6 B;  1JRP A;  2Q85 A;  2EXR A;  3RJ8 A;  3S1E A;  3NS1 B;  3NRZ B;  3DQ0 A;  2VFS A;  1W1M A;  4BBY A;  4PZF A;  3VTE A;  5AWV A;  3TSJ A;  1E8H A;  1T3Q C;  3LAE A; 
#chains in the Genus database with same CATH homology
 1AHZ A;  1W1O A;  3S1C A;  2P3H A;  1WVE A;  4DNS A;  3HRD C;  1WVF A;  5D79 A;  4BCA A;  1W1J A;  2NQW A;  1N63 C;  5L6F A;  3S1D A;  2RK5 A;  2O3G A;  3D2J A;  1AHU A;  4BC7 A;  3EUB 3;  2Y08 A;  3NVV B;  3BW7 A;  3RJA A;  4PVH A;  3FW7 A;  2Y3S A;  3AN1 A;  4PVJ A;  1DIQ A;  1W1L A;  5I1W A;  1QLU A;  4BC9 A;  2Y3R A;  2QKN A;  3TX1 A;  4EC3 A;  4OAL A;  1WYG A;  3PM9 A;  2UUV A;  4UD8 A;  2W54 A;  1SB3 B;  4HG0 A;  2BVH A;  2AXR A;  3POP A;  5FXD A;  1JRO A;  2E3T A;  5ADZ A;  1E8F A;  1N62 C;  1W1Q A;  4PWB A;  1N5X A;  1W1K A;  1UXY A;  5HMR A;  5HHZ A;  2Y4G A;  2YVS A;  2P4P A;  2P13 A;  5K8E A;  2R8D A;  1N61 C;  1MBB A;  3ETR B;  2I0K A;  3D2D A;  4JAY A;  1FFV C;  4O95 A;  1QLT A;  2W55 A;  2R2Z A;  1VDV A;  5AE1 A;  3GSY A;  2BVF A;  3FW8 A;  3LLB A;  1E0Y A;  5FXE A;  3W8W A;  3W8Z A;  3FW9 A;  5FXP A;  1FFU C;  2UUU A;  1F0X A;  1I19 A;  4ZOH B;  2VAO A;  2GQT A;  2WDW A;  3DED A;  3HSU A;  4ML8 A;  3AMZ A;  5AE2 A;  2IPI A;  1VAO A;  2Q4W A;  4PVE A;  2VFV A;  3AM9 A;  3I99 A;  1N60 C;  3NVZ B;  1N5W C;  4XLO A;  1DII A;  2GQU A;  3TSH A;  1ZXI C;  4JB1 A;  3SR6 B;  1ZR6 A;  2BVG A;  2PLS A;  4PVK A;  2W3R A;  3W8X A;  2W3S A;  3JS8 A;  2QPM A;  1AHV A;  5AE3 A;  5G5G B;  2VFU A;  1W1S A;  3KJM A;  3NVY B;  3D2H A;  3PQB A;  3S1F A;  5I1V A;  5HQX A;  3FWA A;  2PLI A;  2MBR A;  1W1R A;  1FO4 A;  5L6G A;  4MLA A;  1DZN A;  1HSK A;  4PYT A;  3B9J B;  3C0P A;  2OAI A;  1MBT A;  1V97 A;  4PWC A;  2VFT A;  3NVW B;  1E8G A;  2VFR A;  5G5H B;  5FXF A;  1FIQ B;  1RM6 B;  1JRP A;  2Q85 A;  2EXR A;  3RJ8 A;  3S1E A;  3NS1 B;  3NRZ B;  3DQ0 A;  2VFS A;  1W1M A;  4BBY A;  4PZF A;  3VTE A;  5AWV A;  3TSJ A;  1E8H A;  1T3Q C;  3LAE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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