3S1FA

Asp169glu mutant of maize cytokinin oxidase/dehydrogenase complexed with n6-isopentenyladenine
Total Genus 166
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
166
sequence length
502
structure length
498
Chain Sequence
PWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTADLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTEYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRLVYTDFAAFSADQERLTAPRPASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Cytokinin dehydrogenase 1
publication title Kinetic and structural investigation of the cytokinin oxidase/dehydrogenase active site.
pubmed doi rcsb
source organism Zea mays
total genus 166
structure length 498
sequence length 502
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3s1fA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3s1fA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 3s1fA03
2VFVA 4ZOHB 2YVSA 4DNSA 1DIQA 4O95A 5HHZA 3FW9A 5AE3A 1F0XA 4UD8A 2O3GA 1W1JA 1I19A 5AE1A 2OAIA 3NVVB 1N61C 3NS1B 2VFRA 5HMRA 2P13A 1HSKA 4OALA 5FXDA 1W1SA 1ZXIC 3S1EA 2VAOA 5G5GB 5D79A 1RM6B 4XLOA 1FIQB 3SR6B 1W1OA 1E8GA 1JROA 3BW7A 4PWBA 1WVEA 1MBBA 3DEDA 3B9JB 1E0YA 2MBRA 1N63C 1WVFA 5HQXA 1FO4A 2BVFA 2VFSA 5AE2A 1N5XA 1N5WC 1W1RA 1DIIA 3NVWB 3KJMA 3GSYA 5FXEA 4BC9A 3AM9A 1FFUC 1QLTA 3NVYB 3TX1A 4JAYA 4PZFA 3I99A 4MLAA 4BCAA 3ETRB 4PVEA 3C0PA 4PWCA 1VAOA 2W3RA 1W1LA 2BVHA 2RK5A 4ML8A 3FW8A 1ZR6A 4PYTA 3D2HA 1MBTA 3D2JA 2AXRA 4PVHA 1T3QC 2W55A 1AHUA 2W3SA 1UXYA 4EC3A 3W8ZA 2VFUA 3FWAA 1JRPA 2R2ZA 3HRDC 4BC7A 1DZNA 3AN1A 1V97A 5G5HB 2W54A 1AHZA 2NQWA 5FXPA 4HG0A 3EUB3 2E3TA 3FW7A 1WYGA 3NVZB 2QKNA 2PLIA 1W1MA 4JB1A 3AMZA 4PVKA 1W1KA 2EXRA 1AHVA 2GQTA 1FFVC 3VTEA 3W8XA 4BBYA 2VFTA 3NRZB 2Q85A 3W8WA 1W1QA 2QPMA 5ADZA 3TSJA 3TSHA 3S1CA 3PM9A 2Q4WA 1E8HA 1E8FA 1SB3B 5FXFA 1QLUA 3D2DA 2P3HA 2R8DA 4PVJA 3S1FA 1N62C 2I0KA 2BVGA 2PLSA 3LAEA 3DQ0A 1N60C 3LLBA 3S1DA 3JS8A 1VDVA 2P4PA 2GQUA
chains in the Genus database with same CATH superfamily
2VFVA 4ZOHB 2YVSA 4DNSA 1DIQA 3EJDB 5I1VA 4O95A 5HHZA 3FW9A 5AE3A 1F0XA 4UD8A 2O3GA 1W1JA 3RJAA 1I19A 5AE1A 2OAIA 3PQBA 3NVVB 1N61C 3NS1B 2VFRA 5HMRA 2P13A 1HSKA 4OALA 5FXDA 1W1SA 1ZXIC 3S1EA 2VAOA 5G5GB 5D79A 1RM6B 4XLOA 1FIQB 3SR6B 2IPIA 1W1OA 1E8GA 1JROA 3BW7A 4PWBA 1WVEA 1MBBA 3DEDA 3B9JB 1E0YA 2MBRA 2WDWA 1N63C 1WVFA 5HQXA 1FO4A 2BVFA 2VFSA 5AE2A 3RJ8A 1N5XA 1N5WC 1W1RA 1DIIA 3NVWB 3KJMA 3GSYA 5FXEA 4BC9A 2Y4GA 3AM9A 1FFUC 1QLTA 3NVYB 3TX1A 4JAYA 4PZFA 3I99A 4MLAA 4BCAA 3ETRB 4PVEA 3C0PA 4PWCA 1VAOA 2W3RA 1W1LA 2BVHA 2RK5A 4ML8A 5K8EA 3FW8A 1ZR6A 5L6GA 3EJBB 4PYTA 3D2HA 1MBTA 3D2JA 2AXRA 4PVHA 1T3QC 2W55A 1AHUA 2W3SA 1UXYA 4EC3A 3W8ZA 2VFUA 2Y3RA 3FWAA 1JRPA 2R2ZA 3HRDC 4BC7A 5AWVA 1DZNA 3AN1A 1V97A 5G5HB 2W54A 1AHZA 2NQWA 2Y08A 5FXPA 4HG0A 3EUB3 2E3TA 3FW7A 1WYGA 3NVZB 2QKNA 2PLIA 1W1MA 4JB1A 3AMZA 4PVKA 1W1KA 2EXRA 1AHVA 2GQTA 1FFVC 3VTEA 3W8XA 4BBYA 2VFTA 3NRZB 3EJEB 2Y3SA 2Q85A 3W8WA 1W1QA 3POPA 2QPMA 5ADZA 3TSJA 3TSHA 3S1CA 3PM9A 2Q4WA 1E8HA 1E8FA 2UUVA 1SB3B 5FXFA 5L6FA 3HSUA 1QLUA 3D2DA 2P3HA 2R8DA 4PVJA 2UUUA 5I1WA 3S1FA 1N62C 2I0KA 2BVGA 2PLSA 3LAEA 3DQ0A 1N60C 3LLBA 3S1DA 3JS8A 1VDVA 2P4PA 2GQUA
chains in the Genus database with same CATH topology
2VFVA 4ZOHB 2YVSA 4DNSA 1DIQA 5I1VA 4O95A 5HHZA 3FW9A 5AE3A 1F0XA 4UD8A 2O3GA 1W1JA 3RJAA 1I19A 5AE1A 2OAIA 3PQBA 3NVVB 1N61C 3NS1B 2VFRA 5HMRA 2P13A 1HSKA 4OALA 5FXDA 1W1SA 1ZXIC 3S1EA 2VAOA 5G5GB 5D79A 1RM6B 4XLOA 1FIQB 3SR6B 2IPIA 1W1OA 1E8GA 1JROA 3BW7A 4PWBA 1WVEA 1MBBA 3DEDA 3B9JB 1E0YA 2MBRA 2WDWA 1N63C 1WVFA 5HQXA 1FO4A 2BVFA 2VFSA 5AE2A 3RJ8A 1N5XA 1N5WC 1W1RA 1DIIA 3NVWB 3KJMA 3GSYA 5FXEA 4BC9A 2Y4GA 3AM9A 1FFUC 1QLTA 3NVYB 3TX1A 4JAYA 4PZFA 3I99A 4MLAA 4BCAA 3ETRB 4PVEA 3C0PA 4PWCA 1VAOA 2W3RA 1W1LA 2BVHA 2RK5A 4ML8A 5K8EA 3FW8A 1ZR6A 5L6GA 4PYTA 3D2HA 1MBTA 3D2JA 2AXRA 4PVHA 1T3QC 2W55A 1AHUA 2W3SA 1UXYA 4EC3A 3W8ZA 2VFUA 2Y3RA 3FWAA 1JRPA 2R2ZA 3HRDC 4BC7A 5AWVA 1DZNA 3AN1A 1V97A 5G5HB 2W54A 1AHZA 2NQWA 2Y08A 5FXPA 4HG0A 3EUB3 2E3TA 3FW7A 1WYGA 3NVZB 2QKNA 2PLIA 1W1MA 4JB1A 3AMZA 4PVKA 1W1KA 2EXRA 1AHVA 2GQTA 1FFVC 3VTEA 3W8XA 4BBYA 2VFTA 3NRZB 2Y3SA 2Q85A 3W8WA 1W1QA 3POPA 2QPMA 5ADZA 3TSJA 3TSHA 3S1CA 3PM9A 2Q4WA 1E8HA 1E8FA 2UUVA 1SB3B 5FXFA 5L6FA 3HSUA 1QLUA 3D2DA 2P3HA 2R8DA 4PVJA 2UUUA 5I1WA 3S1FA 1N62C 2I0KA 2BVGA 2PLSA 3LAEA 3DQ0A 1N60C 3LLBA 3S1DA 3JS8A 1VDVA 2P4PA 2GQUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2VFV A;  4ZOH B;  2YVS A;  4DNS A;  1DIQ A;  4O95 A;  5HHZ A;  3FW9 A;  5AE3 A;  1F0X A;  4UD8 A;  2O3G A;  1W1J A;  1I19 A;  5AE1 A;  2OAI A;  3NVV B;  1N61 C;  3NS1 B;  2VFR A;  5HMR A;  2P13 A;  1HSK A;  4OAL A;  5FXD A;  1W1S A;  1ZXI C;  3S1E A;  2VAO A;  5G5G B;  5D79 A;  1RM6 B;  4XLO A;  1FIQ B;  3SR6 B;  1W1O A;  1E8G A;  1JRO A;  3BW7 A;  4PWB A;  1WVE A;  1MBB A;  3DED A;  3B9J B;  1E0Y A;  2MBR A;  1N63 C;  1WVF A;  5HQX A;  1FO4 A;  2BVF A;  2VFS A;  5AE2 A;  1N5X A;  1N5W C;  1W1R A;  1DII A;  3NVW B;  3KJM A;  3GSY A;  5FXE A;  4BC9 A;  3AM9 A;  1FFU C;  1QLT A;  3NVY B;  3TX1 A;  4JAY A;  4PZF A;  3I99 A;  4MLA A;  4BCA A;  3ETR B;  4PVE A;  3C0P A;  4PWC A;  1VAO A;  2W3R A;  1W1L A;  2BVH A;  2RK5 A;  4ML8 A;  3FW8 A;  1ZR6 A;  4PYT A;  3D2H A;  1MBT A;  3D2J A;  2AXR A;  4PVH A;  1T3Q C;  2W55 A;  1AHU A;  2W3S A;  1UXY A;  4EC3 A;  3W8Z A;  2VFU A;  3FWA A;  1JRP A;  2R2Z A;  3HRD C;  4BC7 A;  1DZN A;  3AN1 A;  1V97 A;  5G5H B;  2W54 A;  1AHZ A;  2NQW A;  5FXP A;  4HG0 A;  3EUB 3;  2E3T A;  3FW7 A;  1WYG A;  3NVZ B;  2QKN A;  2PLI A;  1W1M A;  4JB1 A;  3AMZ A;  4PVK A;  1W1K A;  2EXR A;  1AHV A;  2GQT A;  1FFV C;  3VTE A;  3W8X A;  4BBY A;  2VFT A;  3NRZ B;  2Q85 A;  3W8W A;  1W1Q A;  2QPM A;  5ADZ A;  3TSJ A;  3TSH A;  3S1C A;  3PM9 A;  2Q4W A;  1E8H A;  1E8F A;  1SB3 B;  5FXF A;  1QLU A;  3D2D A;  2P3H A;  2R8D A;  4PVJ A;  3S1F A;  1N62 C;  2I0K A;  2BVG A;  2PLS A;  3LAE A;  3DQ0 A;  1N60 C;  3LLB A;  3S1D A;  3JS8 A;  1VDV A;  2P4P A;  2GQU A; 
#chains in the Genus database with same CATH topology
 2VFV A;  4ZOH B;  2YVS A;  4DNS A;  1DIQ A;  3EJD B;  5I1V A;  4O95 A;  5HHZ A;  3FW9 A;  5AE3 A;  1F0X A;  4UD8 A;  2O3G A;  1W1J A;  3RJA A;  1I19 A;  5AE1 A;  2OAI A;  3PQB A;  3NVV B;  1N61 C;  3NS1 B;  2VFR A;  5HMR A;  2P13 A;  1HSK A;  4OAL A;  5FXD A;  1W1S A;  1ZXI C;  3S1E A;  2VAO A;  5G5G B;  5D79 A;  1RM6 B;  4XLO A;  1FIQ B;  3SR6 B;  2IPI A;  1W1O A;  1E8G A;  1JRO A;  3BW7 A;  4PWB A;  1WVE A;  1MBB A;  3DED A;  3B9J B;  1E0Y A;  2MBR A;  2WDW A;  1N63 C;  1WVF A;  5HQX A;  1FO4 A;  2BVF A;  2VFS A;  5AE2 A;  3RJ8 A;  1N5X A;  1N5W C;  1W1R A;  1DII A;  3NVW B;  3KJM A;  3GSY A;  5FXE A;  4BC9 A;  2Y4G A;  3AM9 A;  1FFU C;  1QLT A;  3NVY B;  3TX1 A;  4JAY A;  4PZF A;  3I99 A;  4MLA A;  4BCA A;  3ETR B;  4PVE A;  3C0P A;  4PWC A;  1VAO A;  2W3R A;  1W1L A;  2BVH A;  2RK5 A;  4ML8 A;  5K8E A;  3FW8 A;  1ZR6 A;  5L6G A;  3EJB B;  4PYT A;  3D2H A;  1MBT A;  3D2J A;  2AXR A;  4PVH A;  1T3Q C;  2W55 A;  1AHU A;  2W3S A;  1UXY A;  4EC3 A;  3W8Z A;  2VFU A;  2Y3R A;  3FWA A;  1JRP A;  2R2Z A;  3HRD C;  4BC7 A;  5AWV A;  1DZN A;  3AN1 A;  1V97 A;  5G5H B;  2W54 A;  1AHZ A;  2NQW A;  2Y08 A;  5FXP A;  4HG0 A;  3EUB 3;  2E3T A;  3FW7 A;  1WYG A;  3NVZ B;  2QKN A;  2PLI A;  1W1M A;  4JB1 A;  3AMZ A;  4PVK A;  1W1K A;  2EXR A;  1AHV A;  2GQT A;  1FFV C;  3VTE A;  3W8X A;  4BBY A;  2VFT A;  3NRZ B;  3EJE B;  2Y3S A;  2Q85 A;  3W8W A;  1W1Q A;  3POP A;  2QPM A;  5ADZ A;  3TSJ A;  3TSH A;  3S1C A;  3PM9 A;  2Q4W A;  1E8H A;  1E8F A;  2UUV A;  1SB3 B;  5FXF A;  5L6F A;  3HSU A;  1QLU A;  3D2D A;  2P3H A;  2R8D A;  4PVJ A;  2UUU A;  5I1W A;  3S1F A;  1N62 C;  2I0K A;  2BVG A;  2PLS A;  3LAE A;  3DQ0 A;  1N60 C;  3LLB A;  3S1D A;  3JS8 A;  1VDV A;  2P4P A;  2GQU A; 
#chains in the Genus database with same CATH homology
 2VFV A;  4ZOH B;  2YVS A;  4DNS A;  1DIQ A;  5I1V A;  4O95 A;  5HHZ A;  3FW9 A;  5AE3 A;  1F0X A;  4UD8 A;  2O3G A;  1W1J A;  3RJA A;  1I19 A;  5AE1 A;  2OAI A;  3PQB A;  3NVV B;  1N61 C;  3NS1 B;  2VFR A;  5HMR A;  2P13 A;  1HSK A;  4OAL A;  5FXD A;  1W1S A;  1ZXI C;  3S1E A;  2VAO A;  5G5G B;  5D79 A;  1RM6 B;  4XLO A;  1FIQ B;  3SR6 B;  2IPI A;  1W1O A;  1E8G A;  1JRO A;  3BW7 A;  4PWB A;  1WVE A;  1MBB A;  3DED A;  3B9J B;  1E0Y A;  2MBR A;  2WDW A;  1N63 C;  1WVF A;  5HQX A;  1FO4 A;  2BVF A;  2VFS A;  5AE2 A;  3RJ8 A;  1N5X A;  1N5W C;  1W1R A;  1DII A;  3NVW B;  3KJM A;  3GSY A;  5FXE A;  4BC9 A;  2Y4G A;  3AM9 A;  1FFU C;  1QLT A;  3NVY B;  3TX1 A;  4JAY A;  4PZF A;  3I99 A;  4MLA A;  4BCA A;  3ETR B;  4PVE A;  3C0P A;  4PWC A;  1VAO A;  2W3R A;  1W1L A;  2BVH A;  2RK5 A;  4ML8 A;  5K8E A;  3FW8 A;  1ZR6 A;  5L6G A;  4PYT A;  3D2H A;  1MBT A;  3D2J A;  2AXR A;  4PVH A;  1T3Q C;  2W55 A;  1AHU A;  2W3S A;  1UXY A;  4EC3 A;  3W8Z A;  2VFU A;  2Y3R A;  3FWA A;  1JRP A;  2R2Z A;  3HRD C;  4BC7 A;  5AWV A;  1DZN A;  3AN1 A;  1V97 A;  5G5H B;  2W54 A;  1AHZ A;  2NQW A;  2Y08 A;  5FXP A;  4HG0 A;  3EUB 3;  2E3T A;  3FW7 A;  1WYG A;  3NVZ B;  2QKN A;  2PLI A;  1W1M A;  4JB1 A;  3AMZ A;  4PVK A;  1W1K A;  2EXR A;  1AHV A;  2GQT A;  1FFV C;  3VTE A;  3W8X A;  4BBY A;  2VFT A;  3NRZ B;  2Y3S A;  2Q85 A;  3W8W A;  1W1Q A;  3POP A;  2QPM A;  5ADZ A;  3TSJ A;  3TSH A;  3S1C A;  3PM9 A;  2Q4W A;  1E8H A;  1E8F A;  2UUV A;  1SB3 B;  5FXF A;  5L6F A;  3HSU A;  1QLU A;  3D2D A;  2P3H A;  2R8D A;  4PVJ A;  2UUU A;  5I1W A;  3S1F A;  1N62 C;  2I0K A;  2BVG A;  2PLS A;  3LAE A;  3DQ0 A;  1N60 C;  3LLB A;  3S1D A;  3JS8 A;  1VDV A;  2P4P A;  2GQU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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