3S1FA

Asp169glu mutant of maize cytokinin oxidase/dehydrogenase complexed with n6-isopentenyladenine
Total Genus 166
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
166
sequence length
502
structure length
498
Chain Sequence
PWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTADLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTEYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRLVYTDFAAFSADQERLTAPRPASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Cytokinin dehydrogenase 1
publication title Kinetic and structural investigation of the cytokinin oxidase/dehydrogenase active site.
pubmed doi rcsb
source organism Zea mays
total genus 166
structure length 498
sequence length 502
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3s1fA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3s1fA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 3s1fA03
1HSKA 1FIQB 5HHZA 2P3HA 2VAOA 4BCAA 2NQWA 3S1EA 2O3GA 2PLIA 2Q85A 2VFVA 4HG0A 1VAOA 1W1MA 2BVGA 3PM9A 2QPMA 2W3SA 4PWBA 1F0XA 2W3RA 5HQXA 3EUB3 3S1DA 3LAEA 3W8XA 4OALA 1N5XA 3NS1B 3NVZB 1N5WC 3W8WA 3D2DA 1W1KA 1W1JA 3S1CA 2VFSA 1ZXIC 2RK5A 5HMRA 3FW7A 2VFUA 1FO4A 3AMZA 3C0PA 3FW9A 4PZFA 2R8DA 1RM6B 2QKNA 1UXYA 2W55A 1DIIA 1W1OA 3B9JB 3TX1A 3GSYA 3SR6B 3DQ0A 4PVEA 1AHVA 4PYTA 2BVHA 4BC7A 5FXPA 3LLBA 2GQUA 3TSJA 5AE3A 2P4PA 2W54A 5ADZA 4JAYA 5D79A 3NRZB 5AE1A 1WYGA 3TSHA 3FW8A 3I99A 2OAIA 2BVFA 3D2HA 1V97A 1SB3B 3FWAA 2VFRA 4JB1A 4PVKA 2PLSA 3KJMA 4PWCA 3AM9A 1DIQA 4ML8A 3HRDC 1FFVC 4EC3A 4PVJA 2MBRA 3D2JA 2I0KA 1ZR6A 5FXEA 2GQTA 2E3TA 2Q4WA 4UD8A 1JRPA 1FFUC 4PVHA 1E8HA 1JROA 5G5GB 4XLOA 1I19A 1AHZA 1N60C 3JS8A 3DEDA 5G5HB 1T3QC 3BW7A 3VTEA 3ETRB 1VDVA 5FXDA 3W8ZA 1W1SA 3S1FA 1AHUA 1E8GA 5AE2A 1WVFA 1MBTA 1QLUA 2VFTA 1MBBA 4BC9A 3NVVB 1E0YA 2EXRA 3NVYB 2P13A 2R2ZA 4MLAA 1N61C 5FXFA 1E8FA 4BBYA 1W1LA 4ZOHB 1W1QA 4O95A 2AXRA 1WVEA 1N62C 1W1RA 3AN1A 1DZNA 2YVSA 3NVWB 4DNSA 1QLTA 1N63C
chains in the Genus database with same CATH superfamily
1HSKA 1FIQB 5HHZA 2Y3RA 2P3HA 2VAOA 4BCAA 2NQWA 3S1EA 2O3GA 3RJAA 2PLIA 2Q85A 2VFVA 4HG0A 1VAOA 1W1MA 2BVGA 3PM9A 2QPMA 2W3SA 4PWBA 1F0XA 2W3RA 5HQXA 3EUB3 3S1DA 3LAEA 3W8XA 4OALA 5L6GA 1N5XA 3NS1B 3NVZB 1N5WC 3W8WA 3D2DA 1W1KA 2Y4GA 5L6FA 1W1JA 3S1CA 2VFSA 1ZXIC 2RK5A 2UUVA 5HMRA 3FW7A 2VFUA 1FO4A 3AMZA 3C0PA 3FW9A 5I1WA 4PZFA 2R8DA 1RM6B 2QKNA 1UXYA 2W55A 1DIIA 1W1OA 3B9JB 3TX1A 5AWVA 2UUUA 3GSYA 3SR6B 3DQ0A 4PVEA 2Y08A 1AHVA 4PYTA 2BVHA 4BC7A 5FXPA 3LLBA 2GQUA 3TSJA 5AE3A 2P4PA 2W54A 5ADZA 4JAYA 5D79A 3NRZB 5AE1A 1WYGA 3TSHA 3FW8A 3I99A 2OAIA 2BVFA 3HSUA 3D2HA 1V97A 1SB3B 3EJDB 3FWAA 2VFRA 4JB1A 4PVKA 2PLSA 3KJMA 4PWCA 3AM9A 1DIQA 4ML8A 3HRDC 1FFVC 4EC3A 4PVJA 2MBRA 3D2JA 2I0KA 1ZR6A 3EJEB 3POPA 5FXEA 2GQTA 2E3TA 2Q4WA 4UD8A 1JRPA 1FFUC 4PVHA 1E8HA 2IPIA 1JROA 5I1VA 5G5GB 4XLOA 2Y3SA 1I19A 1AHZA 1N60C 3JS8A 3DEDA 5G5HB 1T3QC 3BW7A 3VTEA 3ETRB 1VDVA 5FXDA 3W8ZA 3PQBA 1W1SA 3S1FA 1AHUA 1E8GA 5AE2A 1WVFA 2WDWA 5K8EA 1MBTA 1QLUA 2VFTA 1MBBA 4BC9A 3NVVB 1E0YA 2EXRA 3NVYB 2P13A 2R2ZA 4MLAA 1N61C 5FXFA 1E8FA 4BBYA 1W1LA 4ZOHB 1W1QA 4O95A 2AXRA 3RJ8A 1WVEA 1N62C 1W1RA 3AN1A 1DZNA 2YVSA 3NVWB 4DNSA 1QLTA 3EJBB 1N63C
chains in the Genus database with same CATH topology
1HSKA 1FIQB 5HHZA 2Y3RA 2P3HA 2VAOA 4BCAA 2NQWA 3S1EA 2O3GA 3RJAA 2PLIA 2Q85A 2VFVA 4HG0A 1VAOA 1W1MA 2BVGA 3PM9A 2QPMA 2W3SA 4PWBA 1F0XA 2W3RA 5HQXA 3EUB3 3S1DA 3LAEA 3W8XA 4OALA 5L6GA 1N5XA 3NS1B 3NVZB 1N5WC 3W8WA 3D2DA 1W1KA 2Y4GA 5L6FA 1W1JA 3S1CA 2VFSA 1ZXIC 2RK5A 2UUVA 5HMRA 3FW7A 2VFUA 1FO4A 3AMZA 3C0PA 3FW9A 5I1WA 4PZFA 2R8DA 1RM6B 2QKNA 1UXYA 2W55A 1DIIA 1W1OA 3B9JB 3TX1A 5AWVA 2UUUA 3GSYA 3SR6B 3DQ0A 4PVEA 2Y08A 1AHVA 4PYTA 2BVHA 4BC7A 5FXPA 3LLBA 2GQUA 3TSJA 5AE3A 2P4PA 2W54A 5ADZA 4JAYA 5D79A 3NRZB 5AE1A 1WYGA 3TSHA 3FW8A 3I99A 2OAIA 2BVFA 3HSUA 3D2HA 1V97A 1SB3B 3FWAA 2VFRA 4JB1A 4PVKA 2PLSA 3KJMA 4PWCA 3AM9A 1DIQA 4ML8A 3HRDC 1FFVC 4EC3A 4PVJA 2MBRA 3D2JA 2I0KA 1ZR6A 3POPA 5FXEA 2GQTA 2E3TA 2Q4WA 4UD8A 1JRPA 1FFUC 4PVHA 1E8HA 2IPIA 1JROA 5I1VA 5G5GB 4XLOA 2Y3SA 1I19A 1AHZA 1N60C 3JS8A 3DEDA 5G5HB 1T3QC 3BW7A 3VTEA 3ETRB 1VDVA 5FXDA 3W8ZA 3PQBA 1W1SA 3S1FA 1AHUA 1E8GA 5AE2A 1WVFA 2WDWA 5K8EA 1MBTA 1QLUA 2VFTA 1MBBA 4BC9A 3NVVB 1E0YA 2EXRA 3NVYB 2P13A 2R2ZA 4MLAA 1N61C 5FXFA 1E8FA 4BBYA 1W1LA 4ZOHB 1W1QA 4O95A 2AXRA 3RJ8A 1WVEA 1N62C 1W1RA 3AN1A 1DZNA 2YVSA 3NVWB 4DNSA 1QLTA 1N63C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HSK A;  1FIQ B;  5HHZ A;  2P3H A;  2VAO A;  4BCA A;  2NQW A;  3S1E A;  2O3G A;  2PLI A;  2Q85 A;  2VFV A;  4HG0 A;  1VAO A;  1W1M A;  2BVG A;  3PM9 A;  2QPM A;  2W3S A;  4PWB A;  1F0X A;  2W3R A;  5HQX A;  3EUB 3;  3S1D A;  3LAE A;  3W8X A;  4OAL A;  1N5X A;  3NS1 B;  3NVZ B;  1N5W C;  3W8W A;  3D2D A;  1W1K A;  1W1J A;  3S1C A;  2VFS A;  1ZXI C;  2RK5 A;  5HMR A;  3FW7 A;  2VFU A;  1FO4 A;  3AMZ A;  3C0P A;  3FW9 A;  4PZF A;  2R8D A;  1RM6 B;  2QKN A;  1UXY A;  2W55 A;  1DII A;  1W1O A;  3B9J B;  3TX1 A;  3GSY A;  3SR6 B;  3DQ0 A;  4PVE A;  1AHV A;  4PYT A;  2BVH A;  4BC7 A;  5FXP A;  3LLB A;  2GQU A;  3TSJ A;  5AE3 A;  2P4P A;  2W54 A;  5ADZ A;  4JAY A;  5D79 A;  3NRZ B;  5AE1 A;  1WYG A;  3TSH A;  3FW8 A;  3I99 A;  2OAI A;  2BVF A;  3D2H A;  1V97 A;  1SB3 B;  3FWA A;  2VFR A;  4JB1 A;  4PVK A;  2PLS A;  3KJM A;  4PWC A;  3AM9 A;  1DIQ A;  4ML8 A;  3HRD C;  1FFV C;  4EC3 A;  4PVJ A;  2MBR A;  3D2J A;  2I0K A;  1ZR6 A;  5FXE A;  2GQT A;  2E3T A;  2Q4W A;  4UD8 A;  1JRP A;  1FFU C;  4PVH A;  1E8H A;  1JRO A;  5G5G B;  4XLO A;  1I19 A;  1AHZ A;  1N60 C;  3JS8 A;  3DED A;  5G5H B;  1T3Q C;  3BW7 A;  3VTE A;  3ETR B;  1VDV A;  5FXD A;  3W8Z A;  1W1S A;  3S1F A;  1AHU A;  1E8G A;  5AE2 A;  1WVF A;  1MBT A;  1QLU A;  2VFT A;  1MBB A;  4BC9 A;  3NVV B;  1E0Y A;  2EXR A;  3NVY B;  2P13 A;  2R2Z A;  4MLA A;  1N61 C;  5FXF A;  1E8F A;  4BBY A;  1W1L A;  4ZOH B;  1W1Q A;  4O95 A;  2AXR A;  1WVE A;  1N62 C;  1W1R A;  3AN1 A;  1DZN A;  2YVS A;  3NVW B;  4DNS A;  1QLT A;  1N63 C; 
#chains in the Genus database with same CATH topology
 1HSK A;  1FIQ B;  5HHZ A;  2Y3R A;  2P3H A;  2VAO A;  4BCA A;  2NQW A;  3S1E A;  2O3G A;  3RJA A;  2PLI A;  2Q85 A;  2VFV A;  4HG0 A;  1VAO A;  1W1M A;  2BVG A;  3PM9 A;  2QPM A;  2W3S A;  4PWB A;  1F0X A;  2W3R A;  5HQX A;  3EUB 3;  3S1D A;  3LAE A;  3W8X A;  4OAL A;  5L6G A;  1N5X A;  3NS1 B;  3NVZ B;  1N5W C;  3W8W A;  3D2D A;  1W1K A;  2Y4G A;  5L6F A;  1W1J A;  3S1C A;  2VFS A;  1ZXI C;  2RK5 A;  2UUV A;  5HMR A;  3FW7 A;  2VFU A;  1FO4 A;  3AMZ A;  3C0P A;  3FW9 A;  5I1W A;  4PZF A;  2R8D A;  1RM6 B;  2QKN A;  1UXY A;  2W55 A;  1DII A;  1W1O A;  3B9J B;  3TX1 A;  5AWV A;  2UUU A;  3GSY A;  3SR6 B;  3DQ0 A;  4PVE A;  2Y08 A;  1AHV A;  4PYT A;  2BVH A;  4BC7 A;  5FXP A;  3LLB A;  2GQU A;  3TSJ A;  5AE3 A;  2P4P A;  2W54 A;  5ADZ A;  4JAY A;  5D79 A;  3NRZ B;  5AE1 A;  1WYG A;  3TSH A;  3FW8 A;  3I99 A;  2OAI A;  2BVF A;  3HSU A;  3D2H A;  1V97 A;  1SB3 B;  3EJD B;  3FWA A;  2VFR A;  4JB1 A;  4PVK A;  2PLS A;  3KJM A;  4PWC A;  3AM9 A;  1DIQ A;  4ML8 A;  3HRD C;  1FFV C;  4EC3 A;  4PVJ A;  2MBR A;  3D2J A;  2I0K A;  1ZR6 A;  3EJE B;  3POP A;  5FXE A;  2GQT A;  2E3T A;  2Q4W A;  4UD8 A;  1JRP A;  1FFU C;  4PVH A;  1E8H A;  2IPI A;  1JRO A;  5I1V A;  5G5G B;  4XLO A;  2Y3S A;  1I19 A;  1AHZ A;  1N60 C;  3JS8 A;  3DED A;  5G5H B;  1T3Q C;  3BW7 A;  3VTE A;  3ETR B;  1VDV A;  5FXD A;  3W8Z A;  3PQB A;  1W1S A;  3S1F A;  1AHU A;  1E8G A;  5AE2 A;  1WVF A;  2WDW A;  5K8E A;  1MBT A;  1QLU A;  2VFT A;  1MBB A;  4BC9 A;  3NVV B;  1E0Y A;  2EXR A;  3NVY B;  2P13 A;  2R2Z A;  4MLA A;  1N61 C;  5FXF A;  1E8F A;  4BBY A;  1W1L A;  4ZOH B;  1W1Q A;  4O95 A;  2AXR A;  3RJ8 A;  1WVE A;  1N62 C;  1W1R A;  3AN1 A;  1DZN A;  2YVS A;  3NVW B;  4DNS A;  1QLT A;  3EJB B;  1N63 C; 
#chains in the Genus database with same CATH homology
 1HSK A;  1FIQ B;  5HHZ A;  2Y3R A;  2P3H A;  2VAO A;  4BCA A;  2NQW A;  3S1E A;  2O3G A;  3RJA A;  2PLI A;  2Q85 A;  2VFV A;  4HG0 A;  1VAO A;  1W1M A;  2BVG A;  3PM9 A;  2QPM A;  2W3S A;  4PWB A;  1F0X A;  2W3R A;  5HQX A;  3EUB 3;  3S1D A;  3LAE A;  3W8X A;  4OAL A;  5L6G A;  1N5X A;  3NS1 B;  3NVZ B;  1N5W C;  3W8W A;  3D2D A;  1W1K A;  2Y4G A;  5L6F A;  1W1J A;  3S1C A;  2VFS A;  1ZXI C;  2RK5 A;  2UUV A;  5HMR A;  3FW7 A;  2VFU A;  1FO4 A;  3AMZ A;  3C0P A;  3FW9 A;  5I1W A;  4PZF A;  2R8D A;  1RM6 B;  2QKN A;  1UXY A;  2W55 A;  1DII A;  1W1O A;  3B9J B;  3TX1 A;  5AWV A;  2UUU A;  3GSY A;  3SR6 B;  3DQ0 A;  4PVE A;  2Y08 A;  1AHV A;  4PYT A;  2BVH A;  4BC7 A;  5FXP A;  3LLB A;  2GQU A;  3TSJ A;  5AE3 A;  2P4P A;  2W54 A;  5ADZ A;  4JAY A;  5D79 A;  3NRZ B;  5AE1 A;  1WYG A;  3TSH A;  3FW8 A;  3I99 A;  2OAI A;  2BVF A;  3HSU A;  3D2H A;  1V97 A;  1SB3 B;  3FWA A;  2VFR A;  4JB1 A;  4PVK A;  2PLS A;  3KJM A;  4PWC A;  3AM9 A;  1DIQ A;  4ML8 A;  3HRD C;  1FFV C;  4EC3 A;  4PVJ A;  2MBR A;  3D2J A;  2I0K A;  1ZR6 A;  3POP A;  5FXE A;  2GQT A;  2E3T A;  2Q4W A;  4UD8 A;  1JRP A;  1FFU C;  4PVH A;  1E8H A;  2IPI A;  1JRO A;  5I1V A;  5G5G B;  4XLO A;  2Y3S A;  1I19 A;  1AHZ A;  1N60 C;  3JS8 A;  3DED A;  5G5H B;  1T3Q C;  3BW7 A;  3VTE A;  3ETR B;  1VDV A;  5FXD A;  3W8Z A;  3PQB A;  1W1S A;  3S1F A;  1AHU A;  1E8G A;  5AE2 A;  1WVF A;  2WDW A;  5K8E A;  1MBT A;  1QLU A;  2VFT A;  1MBB A;  4BC9 A;  3NVV B;  1E0Y A;  2EXR A;  3NVY B;  2P13 A;  2R2Z A;  4MLA A;  1N61 C;  5FXF A;  1E8F A;  4BBY A;  1W1L A;  4ZOH B;  1W1Q A;  4O95 A;  2AXR A;  3RJ8 A;  1WVE A;  1N62 C;  1W1R A;  3AN1 A;  1DZN A;  2YVS A;  3NVW B;  4DNS A;  1QLT A;  1N63 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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