1ZR6A

The crystal structure of an acremonium strictum glucooligosaccharide oxidase reveals a novel flavinylation
Total Genus 161
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
161
sequence length
479
structure length
479
Chain Sequence
EAEFNSINACLAAADVEFHEEDSEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVDDNNVATIQGGARLGYTALELLDQGNRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPRELSMRLEINANALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLYGADLNITYNYDVHEYFYANSLTAPRLSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRDQLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLTKEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAY
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords glucooligosaccharide oxidase
publication title Crystal structure of glucooligosaccharide oxidase from Acremonium strictum: a novel flavinylation of 6-S-cysteinyl, 8alpha-N1-histidyl FAD
pubmed doi rcsb
source organism Acremonium strictum
molecule tags Oxidoreductase
total genus 161
structure length 479
sequence length 479
ec nomenclature ec 1.1.3.-:
pdb deposition date 2005-05-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 1zr6A01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 1zr6A02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 1zr6A03
3D2HA 2Y08A 3BW7A 2Q85A 4PWBA 4XLOA 1DZNA 5AE2A 3C0PA 1JROA 2EXRA 4ZOHB 5I1VA 3S1CA 2OAIA 5K8EA 4ML8A 1T3QC 1E8FA 2I0KA 2BVGA 4PVJA 1AHVA 5HMRA 5G5GB 3HSUA 3LLBA 3NVVB 3NVZB 1N62C 4JAYA 1MBBA 2O3GA 1FFVC 2P13A 1N60C 4UD8A 1V97A 4MLAA 1F0XA 3FWAA 1W1RA 2VFSA 2Y4GA 4PZFA 4OALA 1AHUA 3SR6B 2YVSA 3NVWB 1I19A 3DQ0A 3S1FA 2PLSA 1DIIA 4BC7A 3AMZA 1MBTA 4PVEA 4BBYA 5FXDA 5FXEA 2VAOA 2BVHA 5FXFA 1W1QA 3S1EA 1N63C 1W1KA 1E0YA 3KJMA 4DNSA 1VDVA 2W3SA 3W8XA 1WYGA 3HRDC 1WVEA 5AE3A 1W1SA 2R2ZA 3S1DA 2VFTA 1E8GA 3W8ZA 1FIQB 5HHZA 4PVHA 3POPA 2W55A 1SB3B 2IPIA 3RJAA 1N5WC 1ZXIC 1W1MA 3RJ8A 2E3TA 3FW9A 2GQTA 1WVFA 1FFUC 2PLIA 5L6GA 1N61C 4EC3A 1AHZA 3NVYB 1QLTA 3D2JA 3FW8A 4HG0A 5G5HB 2Y3SA 3D2DA 3NS1B 3TSHA 1HSKA 2GQUA 3GSYA 5HQXA 3I99A 2W3RA 1ZR6A 2AXRA 2QKNA 2QPMA 2R8DA 3DEDA 1DIQA 2P4PA 3PQBA 5AWVA 3AN1A 3VTEA 2NQWA 4JB1A 2VFRA 3JS8A 5D79A 1W1JA 3B9JB 2WDWA 1W1LA 3ETRB 3PM9A 1E8HA 2VFUA 3TX1A 2Y3RA 1FO4A 3AM9A 1JRPA 1UXYA 3EUB3 2RK5A 1RM6B 5ADZA 1N5XA 1VAOA 3W8WA 4PYTA 4O95A 5I1WA 3LAEA 3TSJA 2Q4WA 2VFVA 4PVKA 5L6FA 2W54A 5AE1A 4BCAA 2MBRA 3FW7A 4BC9A 1QLUA 2P3HA 2BVFA 1W1OA 5FXPA 3NRZB 4PWCA
chains in the Genus database with same CATH superfamily
3D2HA 2Y08A 3BW7A 2Q85A 4PWBA 4XLOA 1DZNA 5AE2A 3C0PA 3EJDB 1JROA 2EXRA 4ZOHB 5I1VA 3S1CA 2OAIA 5K8EA 4ML8A 1T3QC 1E8FA 3EJBB 2I0KA 2BVGA 4PVJA 1AHVA 2UUUA 5HMRA 5G5GB 3HSUA 3NVVB 3LLBA 3NVZB 1N62C 4JAYA 1MBBA 2O3GA 1FFVC 2P13A 1N60C 4UD8A 1V97A 4MLAA 1F0XA 3FWAA 1W1RA 2VFSA 2Y4GA 4PZFA 4OALA 1AHUA 3SR6B 2YVSA 3NVWB 1I19A 3DQ0A 3S1FA 2PLSA 1DIIA 4BC7A 3AMZA 1MBTA 4PVEA 4BBYA 5FXDA 5FXEA 2VAOA 2BVHA 5FXFA 1W1QA 3S1EA 1N63C 1W1KA 1E0YA 3KJMA 4DNSA 1VDVA 2W3SA 3W8XA 1WYGA 3HRDC 1WVEA 5AE3A 1W1SA 2R2ZA 3S1DA 2VFTA 1E8GA 3W8ZA 1FIQB 5HHZA 4PVHA 3POPA 2W55A 1SB3B 2IPIA 3RJAA 1N5WC 1ZXIC 3EJEB 1W1MA 3RJ8A 2E3TA 3FW9A 2GQTA 1WVFA 2UUVA 1FFUC 2PLIA 5L6GA 1N61C 4EC3A 1AHZA 3NVYB 1QLTA 3D2JA 3FW8A 4HG0A 2Y3SA 5G5HB 3D2DA 3NS1B 3TSHA 1HSKA 2GQUA 3GSYA 5HQXA 3I99A 2W3RA 1ZR6A 2AXRA 2QKNA 2QPMA 2R8DA 3DEDA 1DIQA 2P4PA 3PQBA 5AWVA 3AN1A 3VTEA 2NQWA 4JB1A 2VFRA 3JS8A 5D79A 1W1JA 3B9JB 2WDWA 1W1LA 3ETRB 3PM9A 1E8HA 2VFUA 3TX1A 2Y3RA 1FO4A 3AM9A 1JRPA 1UXYA 3EUB3 2RK5A 1RM6B 5ADZA 1N5XA 1VAOA 3W8WA 4PYTA 4O95A 5I1WA 3LAEA 3TSJA 2Q4WA 2VFVA 4PVKA 5L6FA 2W54A 5AE1A 4BCAA 2MBRA 3FW7A 4BC9A 1QLUA 2P3HA 2BVFA 1W1OA 5FXPA 3NRZB 4PWCA
chains in the Genus database with same CATH topology
3D2HA 2Y08A 3BW7A 2Q85A 4PWBA 4XLOA 1DZNA 5AE2A 3C0PA 1JROA 2EXRA 4ZOHB 5I1VA 3S1CA 2OAIA 5K8EA 4ML8A 1T3QC 1E8FA 2I0KA 2BVGA 4PVJA 1AHVA 2UUUA 5HMRA 5G5GB 3HSUA 3LLBA 3NVVB 3NVZB 1N62C 4JAYA 1MBBA 2O3GA 1FFVC 2P13A 1N60C 4UD8A 1V97A 4MLAA 1F0XA 3FWAA 1W1RA 2VFSA 2Y4GA 4PZFA 4OALA 1AHUA 3SR6B 2YVSA 3NVWB 1I19A 3DQ0A 3S1FA 2PLSA 1DIIA 4BC7A 3AMZA 1MBTA 4PVEA 4BBYA 5FXDA 5FXEA 2VAOA 2BVHA 5FXFA 1W1QA 3S1EA 1N63C 1W1KA 1E0YA 3KJMA 4DNSA 1VDVA 2W3SA 3W8XA 1WYGA 3HRDC 1WVEA 5AE3A 1W1SA 2R2ZA 3S1DA 2VFTA 1E8GA 3W8ZA 1FIQB 5HHZA 4PVHA 3POPA 2W55A 1SB3B 2IPIA 3RJAA 1N5WC 1ZXIC 1W1MA 3RJ8A 2E3TA 3FW9A 2GQTA 1WVFA 2UUVA 1FFUC 2PLIA 5L6GA 1N61C 4EC3A 1AHZA 3NVYB 1QLTA 3D2JA 3FW8A 4HG0A 2Y3SA 5G5HB 3D2DA 3NS1B 3TSHA 1HSKA 2GQUA 3GSYA 5HQXA 3I99A 2W3RA 1ZR6A 2AXRA 2QKNA 2QPMA 2R8DA 3DEDA 1DIQA 2P4PA 3PQBA 5AWVA 3AN1A 3VTEA 2NQWA 4JB1A 2VFRA 3JS8A 5D79A 1W1JA 3B9JB 2WDWA 1W1LA 3ETRB 3PM9A 1E8HA 2VFUA 3TX1A 2Y3RA 1FO4A 3AM9A 1JRPA 1UXYA 3EUB3 2RK5A 1RM6B 5ADZA 1N5XA 1VAOA 3W8WA 4PYTA 4O95A 5I1WA 3LAEA 3TSJA 2Q4WA 2VFVA 4PVKA 5L6FA 2W54A 5AE1A 4BCAA 2MBRA 3FW7A 4BC9A 1QLUA 2P3HA 2BVFA 1W1OA 5FXPA 3NRZB 4PWCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3D2H A;  2Y08 A;  3BW7 A;  2Q85 A;  4PWB A;  4XLO A;  1DZN A;  5AE2 A;  3C0P A;  1JRO A;  2EXR A;  4ZOH B;  5I1V A;  3S1C A;  2OAI A;  5K8E A;  4ML8 A;  1T3Q C;  1E8F A;  2I0K A;  2BVG A;  4PVJ A;  1AHV A;  5HMR A;  5G5G B;  3HSU A;  3LLB A;  3NVV B;  3NVZ B;  1N62 C;  4JAY A;  1MBB A;  2O3G A;  1FFV C;  2P13 A;  1N60 C;  4UD8 A;  1V97 A;  4MLA A;  1F0X A;  3FWA A;  1W1R A;  2VFS A;  2Y4G A;  4PZF A;  4OAL A;  1AHU A;  3SR6 B;  2YVS A;  3NVW B;  1I19 A;  3DQ0 A;  3S1F A;  2PLS A;  1DII A;  4BC7 A;  3AMZ A;  1MBT A;  4PVE A;  4BBY A;  5FXD A;  5FXE A;  2VAO A;  2BVH A;  5FXF A;  1W1Q A;  3S1E A;  1N63 C;  1W1K A;  1E0Y A;  3KJM A;  4DNS A;  1VDV A;  2W3S A;  3W8X A;  1WYG A;  3HRD C;  1WVE A;  5AE3 A;  1W1S A;  2R2Z A;  3S1D A;  2VFT A;  1E8G A;  3W8Z A;  1FIQ B;  5HHZ A;  4PVH A;  3POP A;  2W55 A;  1SB3 B;  2IPI A;  3RJA A;  1N5W C;  1ZXI C;  1W1M A;  3RJ8 A;  2E3T A;  3FW9 A;  2GQT A;  1WVF A;  1FFU C;  2PLI A;  5L6G A;  1N61 C;  4EC3 A;  1AHZ A;  3NVY B;  1QLT A;  3D2J A;  3FW8 A;  4HG0 A;  5G5H B;  2Y3S A;  3D2D A;  3NS1 B;  3TSH A;  1HSK A;  2GQU A;  3GSY A;  5HQX A;  3I99 A;  2W3R A;  1ZR6 A;  2AXR A;  2QKN A;  2QPM A;  2R8D A;  3DED A;  1DIQ A;  2P4P A;  3PQB A;  5AWV A;  3AN1 A;  3VTE A;  2NQW A;  4JB1 A;  2VFR A;  3JS8 A;  5D79 A;  1W1J A;  3B9J B;  2WDW A;  1W1L A;  3ETR B;  3PM9 A;  1E8H A;  2VFU A;  3TX1 A;  2Y3R A;  1FO4 A;  3AM9 A;  1JRP A;  1UXY A;  3EUB 3;  2RK5 A;  1RM6 B;  5ADZ A;  1N5X A;  1VAO A;  3W8W A;  4PYT A;  4O95 A;  5I1W A;  3LAE A;  3TSJ A;  2Q4W A;  2VFV A;  4PVK A;  5L6F A;  2W54 A;  5AE1 A;  4BCA A;  2MBR A;  3FW7 A;  4BC9 A;  1QLU A;  2P3H A;  2BVF A;  1W1O A;  5FXP A;  3NRZ B;  4PWC A; 
#chains in the Genus database with same CATH topology
 3D2H A;  2Y08 A;  3BW7 A;  2Q85 A;  4PWB A;  4XLO A;  1DZN A;  5AE2 A;  3C0P A;  3EJD B;  1JRO A;  2EXR A;  4ZOH B;  5I1V A;  3S1C A;  2OAI A;  5K8E A;  4ML8 A;  1T3Q C;  1E8F A;  3EJB B;  2I0K A;  2BVG A;  4PVJ A;  1AHV A;  2UUU A;  5HMR A;  5G5G B;  3HSU A;  3NVV B;  3LLB A;  3NVZ B;  1N62 C;  4JAY A;  1MBB A;  2O3G A;  1FFV C;  2P13 A;  1N60 C;  4UD8 A;  1V97 A;  4MLA A;  1F0X A;  3FWA A;  1W1R A;  2VFS A;  2Y4G A;  4PZF A;  4OAL A;  1AHU A;  3SR6 B;  2YVS A;  3NVW B;  1I19 A;  3DQ0 A;  3S1F A;  2PLS A;  1DII A;  4BC7 A;  3AMZ A;  1MBT A;  4PVE A;  4BBY A;  5FXD A;  5FXE A;  2VAO A;  2BVH A;  5FXF A;  1W1Q A;  3S1E A;  1N63 C;  1W1K A;  1E0Y A;  3KJM A;  4DNS A;  1VDV A;  2W3S A;  3W8X A;  1WYG A;  3HRD C;  1WVE A;  5AE3 A;  1W1S A;  2R2Z A;  3S1D A;  2VFT A;  1E8G A;  3W8Z A;  1FIQ B;  5HHZ A;  4PVH A;  3POP A;  2W55 A;  1SB3 B;  2IPI A;  3RJA A;  1N5W C;  1ZXI C;  3EJE B;  1W1M A;  3RJ8 A;  2E3T A;  3FW9 A;  2GQT A;  1WVF A;  2UUV A;  1FFU C;  2PLI A;  5L6G A;  1N61 C;  4EC3 A;  1AHZ A;  3NVY B;  1QLT A;  3D2J A;  3FW8 A;  4HG0 A;  2Y3S A;  5G5H B;  3D2D A;  3NS1 B;  3TSH A;  1HSK A;  2GQU A;  3GSY A;  5HQX A;  3I99 A;  2W3R A;  1ZR6 A;  2AXR A;  2QKN A;  2QPM A;  2R8D A;  3DED A;  1DIQ A;  2P4P A;  3PQB A;  5AWV A;  3AN1 A;  3VTE A;  2NQW A;  4JB1 A;  2VFR A;  3JS8 A;  5D79 A;  1W1J A;  3B9J B;  2WDW A;  1W1L A;  3ETR B;  3PM9 A;  1E8H A;  2VFU A;  3TX1 A;  2Y3R A;  1FO4 A;  3AM9 A;  1JRP A;  1UXY A;  3EUB 3;  2RK5 A;  1RM6 B;  5ADZ A;  1N5X A;  1VAO A;  3W8W A;  4PYT A;  4O95 A;  5I1W A;  3LAE A;  3TSJ A;  2Q4W A;  2VFV A;  4PVK A;  5L6F A;  2W54 A;  5AE1 A;  4BCA A;  2MBR A;  3FW7 A;  4BC9 A;  1QLU A;  2P3H A;  2BVF A;  1W1O A;  5FXP A;  3NRZ B;  4PWC A; 
#chains in the Genus database with same CATH homology
 3D2H A;  2Y08 A;  3BW7 A;  2Q85 A;  4PWB A;  4XLO A;  1DZN A;  5AE2 A;  3C0P A;  1JRO A;  2EXR A;  4ZOH B;  5I1V A;  3S1C A;  2OAI A;  5K8E A;  4ML8 A;  1T3Q C;  1E8F A;  2I0K A;  2BVG A;  4PVJ A;  1AHV A;  2UUU A;  5HMR A;  5G5G B;  3HSU A;  3LLB A;  3NVV B;  3NVZ B;  1N62 C;  4JAY A;  1MBB A;  2O3G A;  1FFV C;  2P13 A;  1N60 C;  4UD8 A;  1V97 A;  4MLA A;  1F0X A;  3FWA A;  1W1R A;  2VFS A;  2Y4G A;  4PZF A;  4OAL A;  1AHU A;  3SR6 B;  2YVS A;  3NVW B;  1I19 A;  3DQ0 A;  3S1F A;  2PLS A;  1DII A;  4BC7 A;  3AMZ A;  1MBT A;  4PVE A;  4BBY A;  5FXD A;  5FXE A;  2VAO A;  2BVH A;  5FXF A;  1W1Q A;  3S1E A;  1N63 C;  1W1K A;  1E0Y A;  3KJM A;  4DNS A;  1VDV A;  2W3S A;  3W8X A;  1WYG A;  3HRD C;  1WVE A;  5AE3 A;  1W1S A;  2R2Z A;  3S1D A;  2VFT A;  1E8G A;  3W8Z A;  1FIQ B;  5HHZ A;  4PVH A;  3POP A;  2W55 A;  1SB3 B;  2IPI A;  3RJA A;  1N5W C;  1ZXI C;  1W1M A;  3RJ8 A;  2E3T A;  3FW9 A;  2GQT A;  1WVF A;  2UUV A;  1FFU C;  2PLI A;  5L6G A;  1N61 C;  4EC3 A;  1AHZ A;  3NVY B;  1QLT A;  3D2J A;  3FW8 A;  4HG0 A;  2Y3S A;  5G5H B;  3D2D A;  3NS1 B;  3TSH A;  1HSK A;  2GQU A;  3GSY A;  5HQX A;  3I99 A;  2W3R A;  1ZR6 A;  2AXR A;  2QKN A;  2QPM A;  2R8D A;  3DED A;  1DIQ A;  2P4P A;  3PQB A;  5AWV A;  3AN1 A;  3VTE A;  2NQW A;  4JB1 A;  2VFR A;  3JS8 A;  5D79 A;  1W1J A;  3B9J B;  2WDW A;  1W1L A;  3ETR B;  3PM9 A;  1E8H A;  2VFU A;  3TX1 A;  2Y3R A;  1FO4 A;  3AM9 A;  1JRP A;  1UXY A;  3EUB 3;  2RK5 A;  1RM6 B;  5ADZ A;  1N5X A;  1VAO A;  3W8W A;  4PYT A;  4O95 A;  5I1W A;  3LAE A;  3TSJ A;  2Q4W A;  2VFV A;  4PVK A;  5L6F A;  2W54 A;  5AE1 A;  4BCA A;  2MBR A;  3FW7 A;  4BC9 A;  1QLU A;  2P3H A;  2BVF A;  1W1O A;  5FXP A;  3NRZ B;  4PWC A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...