1WVFA

P-cresol methylhydroxylase: alteration of the structure of the flavoprotein subunit upon its binding to the cytochrome subunit
Total Genus 193
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
193
sequence length
515
structure length
515
Chain Sequence
AVLPKGVTQGEFNKAVQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYTPYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLRMSNTIPNSVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLYAALYGTQEQVDVNWKIVTDVFKKLGKGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSEARGSECKKQAAMAKRVLHKYGLDYVAEFIVAPRDMHHVIDVLYDRTNPEETKRADACFNELLDEFEKEGYAVYRVNTRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSGIDLNNDF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords 4-cresol dehydrogenase [hydroxylating] flavoprotein subunit
publication title p-Cresol Methylhydroxylase: Alteration of the Structure of the Flavoprotein Subunit upon Its Binding to the Cytochrome Subunit
pubmed doi rcsb
source organism Pseudomonas putida
total genus 193
structure length 515
sequence length 515
ec nomenclature ec 1.17.9.1: 4-methylphenol dehydrogenase (hydroxylating).
pdb deposition date 2004-12-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF02913 FAD-oxidase_C FAD linked oxidases, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.45.10 Mainly Alpha Orthogonal Bundle Vanillyl-alcohol Oxidase; Chain A, domain 4 Vanillyl-alcohol Oxidase; Chain A, domain 4 1wvfA04
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 1wvfA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 1wvfA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 1wvfA03
1JRPA 1E8GA 1MBTA 1ZR6A 3LAEA 3AN1A 3VTEA 4PVHA 4XLOA 1HSKA 2AXRA 1F0XA 1RM6B 2EXRA 1W1QA 1FFVC 1W1RA 4BBYA 3DQ0A 4JAYA 4PVJA 3S1EA 2P3HA 1W1KA 2VFRA 1WYGA 4HG0A 1N5XA 5G5GB 4PVEA 1W1MA 4BCAA 1SB3B 3NVWB 1W1LA 3TSHA 4PWBA 5FXEA 2GQUA 2W54A 2RK5A 3D2DA 3GSYA 3NVZB 1UXYA 2BVFA 2Q85A 1E8FA 2E3TA 1E0YA 5HQXA 4BC9A 3EUB3 3FW7A 4O95A 3FWAA 2W55A 1N60C 1DIQA 1VDVA 4ML8A 3AM9A 3B9JB 2VAOA 1AHZA 1AHVA 1ZXIC 4PVKA 1N63C 3S1FA 1DIIA 3D2HA 2VFTA 1JROA 1T3QC 3AMZA 1FFUC 1W1OA 4PYTA 1WVFA 2R8DA 3KJMA 4EC3A 5G5HB 3D2JA 4UD8A 5FXDA 2MBRA 3W8ZA 3S1DA 3S1CA 5ADZA 2GQTA 5AE3A 3W8WA 5AE1A 1N61C 2YVSA 2W3RA 1E8HA 3PM9A 3NVVB 3SR6B 2NQWA 1QLTA 2OAIA 3NS1B 1FIQB 2Q4WA 3DEDA 1V97A 2BVHA 4ZOHB 4PZFA 2O3GA 3W8XA 3NVYB 5FXPA 3NRZB 5HMRA 3TX1A 5HHZA 3JS8A 4MLAA 2I0KA 4OALA 2VFSA 3ETRB 1WVEA 2PLSA 1N5WC 3C0PA 1N62C 1W1JA 2VFVA 4DNSA 1W1SA 2QPMA 4PWCA 1VAOA 3TSJA 1DZNA 1QLUA 1AHUA 2VFUA 3BW7A 3FW9A 2R2ZA 2P4PA 2QKNA 3HRDC 3I99A 1I19A 3FW8A 4JB1A 3LLBA 4BC7A 2PLIA 2W3SA 2BVGA 1FO4A 1MBBA 5D79A 5FXFA 2P13A 5AE2A
chains in the Genus database with same CATH superfamily
1JRPA 1E8GA 1MBTA 1ZR6A 3LAEA 5AWVA 3EJDB 3AN1A 3VTEA 4PVHA 4XLOA 1HSKA 2AXRA 1F0XA 1RM6B 2EXRA 1W1QA 1FFVC 1W1RA 4BBYA 3DQ0A 4JAYA 4PVJA 3S1EA 2P3HA 1W1KA 2VFRA 1WYGA 4HG0A 3RJAA 1N5XA 5G5GB 4PVEA 1W1MA 4BCAA 3NVWB 1SB3B 1W1LA 3TSHA 4PWBA 5FXEA 2GQUA 2W54A 2RK5A 3D2DA 2IPIA 2UUUA 3GSYA 3NVZB 2WDWA 1UXYA 2BVFA 2Q85A 1E8FA 2E3TA 3EJEB 1E0YA 5HQXA 4BC9A 3EUB3 3FW7A 4O95A 3FWAA 2W55A 1N60C 1DIQA 1VDVA 4ML8A 3AM9A 3B9JB 5I1VA 2VAOA 1AHZA 3HSUA 1AHVA 1ZXIC 4PVKA 1N63C 3S1FA 1DIIA 3D2HA 2VFTA 1JROA 1T3QC 3AMZA 1FFUC 1W1OA 4PYTA 2Y3SA 1WVFA 2R8DA 3KJMA 4EC3A 5G5HB 3D2JA 4UD8A 3EJBB 5FXDA 2MBRA 3W8ZA 3S1DA 3S1CA 5ADZA 2GQTA 5AE3A 3W8WA 3PQBA 5AE1A 1N61C 2YVSA 2W3RA 1E8HA 3PM9A 3NVVB 5L6GA 3SR6B 3POPA 2NQWA 5I1WA 1QLTA 2OAIA 3NS1B 2Y3RA 1FIQB 2Q4WA 3DEDA 1V97A 2BVHA 4ZOHB 5K8EA 4PZFA 2Y4GA 2O3GA 3W8XA 3NVYB 5FXPA 3NRZB 5HMRA 3TX1A 5HHZA 3JS8A 4MLAA 3RJ8A 2I0KA 4OALA 2VFSA 3ETRB 1WVEA 2PLSA 1N5WC 3C0PA 1N62C 1W1JA 2VFVA 4DNSA 2Y08A 5L6FA 1W1SA 2QPMA 4PWCA 1VAOA 3TSJA 1DZNA 1QLUA 1AHUA 2VFUA 3BW7A 3FW9A 2R2ZA 2P4PA 2QKNA 3HRDC 3I99A 1I19A 3FW8A 4JB1A 3LLBA 4BC7A 2PLIA 2W3SA 2BVGA 2UUVA 1FO4A 1MBBA 5D79A 5FXFA 2P13A 5AE2A
chains in the Genus database with same CATH topology
1JRPA 1E8GA 1MBTA 1ZR6A 3LAEA 5AWVA 3AN1A 3VTEA 4PVHA 4XLOA 1HSKA 2AXRA 1F0XA 1RM6B 2EXRA 1W1QA 1FFVC 1W1RA 4BBYA 3DQ0A 4JAYA 4PVJA 3S1EA 2P3HA 1W1KA 2VFRA 1WYGA 4HG0A 3RJAA 1N5XA 5G5GB 4PVEA 1W1MA 4BCAA 1SB3B 3NVWB 1W1LA 3TSHA 4PWBA 5FXEA 2GQUA 2W54A 2RK5A 3D2DA 2IPIA 2UUUA 3GSYA 3NVZB 2WDWA 1UXYA 2BVFA 2Q85A 1E8FA 2E3TA 1E0YA 5HQXA 4BC9A 3EUB3 3FW7A 4O95A 3FWAA 2W55A 1N60C 1DIQA 1VDVA 4ML8A 3AM9A 3B9JB 5I1VA 2VAOA 1AHZA 3HSUA 1AHVA 1ZXIC 4PVKA 1N63C 3S1FA 1DIIA 3D2HA 2VFTA 1JROA 1T3QC 3AMZA 1FFUC 1W1OA 4PYTA 2Y3SA 1WVFA 2R8DA 3KJMA 4EC3A 5G5HB 3D2JA 4UD8A 5FXDA 2MBRA 3W8ZA 3S1DA 3S1CA 5ADZA 2GQTA 5AE3A 3W8WA 3PQBA 5AE1A 1N61C 2YVSA 2W3RA 1E8HA 3PM9A 3NVVB 5L6GA 3SR6B 3POPA 2NQWA 5I1WA 1QLTA 2OAIA 3NS1B 2Y3RA 1FIQB 2Q4WA 3DEDA 1V97A 2BVHA 4ZOHB 5K8EA 4PZFA 2Y4GA 2O3GA 3W8XA 3NVYB 5FXPA 3NRZB 5HMRA 3TX1A 5HHZA 3JS8A 4MLAA 3RJ8A 2I0KA 4OALA 2VFSA 3ETRB 1WVEA 2PLSA 1N5WC 3C0PA 1N62C 1W1JA 2VFVA 4DNSA 2Y08A 5L6FA 1W1SA 2QPMA 4PWCA 1VAOA 3TSJA 1DZNA 1QLUA 1AHUA 2VFUA 3BW7A 3FW9A 2R2ZA 2P4PA 2QKNA 3HRDC 3I99A 1I19A 3FW8A 4JB1A 3LLBA 4BC7A 2PLIA 2W3SA 2BVGA 2UUVA 1FO4A 1MBBA 5D79A 5FXFA 2P13A 5AE2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1JRP A;  1E8G A;  1MBT A;  1ZR6 A;  3LAE A;  3AN1 A;  3VTE A;  4PVH A;  4XLO A;  1HSK A;  2AXR A;  1F0X A;  1RM6 B;  2EXR A;  1W1Q A;  1FFV C;  1W1R A;  4BBY A;  3DQ0 A;  4JAY A;  4PVJ A;  3S1E A;  2P3H A;  1W1K A;  2VFR A;  1WYG A;  4HG0 A;  1N5X A;  5G5G B;  4PVE A;  1W1M A;  4BCA A;  1SB3 B;  3NVW B;  1W1L A;  3TSH A;  4PWB A;  5FXE A;  2GQU A;  2W54 A;  2RK5 A;  3D2D A;  3GSY A;  3NVZ B;  1UXY A;  2BVF A;  2Q85 A;  1E8F A;  2E3T A;  1E0Y A;  5HQX A;  4BC9 A;  3EUB 3;  3FW7 A;  4O95 A;  3FWA A;  2W55 A;  1N60 C;  1DIQ A;  1VDV A;  4ML8 A;  3AM9 A;  3B9J B;  2VAO A;  1AHZ A;  1AHV A;  1ZXI C;  4PVK A;  1N63 C;  3S1F A;  1DII A;  3D2H A;  2VFT A;  1JRO A;  1T3Q C;  3AMZ A;  1FFU C;  1W1O A;  4PYT A;  1WVF A;  2R8D A;  3KJM A;  4EC3 A;  5G5H B;  3D2J A;  4UD8 A;  5FXD A;  2MBR A;  3W8Z A;  3S1D A;  3S1C A;  5ADZ A;  2GQT A;  5AE3 A;  3W8W A;  5AE1 A;  1N61 C;  2YVS A;  2W3R A;  1E8H A;  3PM9 A;  3NVV B;  3SR6 B;  2NQW A;  1QLT A;  2OAI A;  3NS1 B;  1FIQ B;  2Q4W A;  3DED A;  1V97 A;  2BVH A;  4ZOH B;  4PZF A;  2O3G A;  3W8X A;  3NVY B;  5FXP A;  3NRZ B;  5HMR A;  3TX1 A;  5HHZ A;  3JS8 A;  4MLA A;  2I0K A;  4OAL A;  2VFS A;  3ETR B;  1WVE A;  2PLS A;  1N5W C;  3C0P A;  1N62 C;  1W1J A;  2VFV A;  4DNS A;  1W1S A;  2QPM A;  4PWC A;  1VAO A;  3TSJ A;  1DZN A;  1QLU A;  1AHU A;  2VFU A;  3BW7 A;  3FW9 A;  2R2Z A;  2P4P A;  2QKN A;  3HRD C;  3I99 A;  1I19 A;  3FW8 A;  4JB1 A;  3LLB A;  4BC7 A;  2PLI A;  2W3S A;  2BVG A;  1FO4 A;  1MBB A;  5D79 A;  5FXF A;  2P13 A;  5AE2 A; 
#chains in the Genus database with same CATH topology
 1JRP A;  1E8G A;  1MBT A;  1ZR6 A;  3LAE A;  5AWV A;  3EJD B;  3AN1 A;  3VTE A;  4PVH A;  4XLO A;  1HSK A;  2AXR A;  1F0X A;  1RM6 B;  2EXR A;  1W1Q A;  1FFV C;  1W1R A;  4BBY A;  3DQ0 A;  4JAY A;  4PVJ A;  3S1E A;  2P3H A;  1W1K A;  2VFR A;  1WYG A;  4HG0 A;  3RJA A;  1N5X A;  5G5G B;  4PVE A;  1W1M A;  4BCA A;  3NVW B;  1SB3 B;  1W1L A;  3TSH A;  4PWB A;  5FXE A;  2GQU A;  2W54 A;  2RK5 A;  3D2D A;  2IPI A;  2UUU A;  3GSY A;  3NVZ B;  2WDW A;  1UXY A;  2BVF A;  2Q85 A;  1E8F A;  2E3T A;  3EJE B;  1E0Y A;  5HQX A;  4BC9 A;  3EUB 3;  3FW7 A;  4O95 A;  3FWA A;  2W55 A;  1N60 C;  1DIQ A;  1VDV A;  4ML8 A;  3AM9 A;  3B9J B;  5I1V A;  2VAO A;  1AHZ A;  3HSU A;  1AHV A;  1ZXI C;  4PVK A;  1N63 C;  3S1F A;  1DII A;  3D2H A;  2VFT A;  1JRO A;  1T3Q C;  3AMZ A;  1FFU C;  1W1O A;  4PYT A;  2Y3S A;  1WVF A;  2R8D A;  3KJM A;  4EC3 A;  5G5H B;  3D2J A;  4UD8 A;  3EJB B;  5FXD A;  2MBR A;  3W8Z A;  3S1D A;  3S1C A;  5ADZ A;  2GQT A;  5AE3 A;  3W8W A;  3PQB A;  5AE1 A;  1N61 C;  2YVS A;  2W3R A;  1E8H A;  3PM9 A;  3NVV B;  5L6G A;  3SR6 B;  3POP A;  2NQW A;  5I1W A;  1QLT A;  2OAI A;  3NS1 B;  2Y3R A;  1FIQ B;  2Q4W A;  3DED A;  1V97 A;  2BVH A;  4ZOH B;  5K8E A;  4PZF A;  2Y4G A;  2O3G A;  3W8X A;  3NVY B;  5FXP A;  3NRZ B;  5HMR A;  3TX1 A;  5HHZ A;  3JS8 A;  4MLA A;  3RJ8 A;  2I0K A;  4OAL A;  2VFS A;  3ETR B;  1WVE A;  2PLS A;  1N5W C;  3C0P A;  1N62 C;  1W1J A;  2VFV A;  4DNS A;  2Y08 A;  5L6F A;  1W1S A;  2QPM A;  4PWC A;  1VAO A;  3TSJ A;  1DZN A;  1QLU A;  1AHU A;  2VFU A;  3BW7 A;  3FW9 A;  2R2Z A;  2P4P A;  2QKN A;  3HRD C;  3I99 A;  1I19 A;  3FW8 A;  4JB1 A;  3LLB A;  4BC7 A;  2PLI A;  2W3S A;  2BVG A;  2UUV A;  1FO4 A;  1MBB A;  5D79 A;  5FXF A;  2P13 A;  5AE2 A; 
#chains in the Genus database with same CATH homology
 1JRP A;  1E8G A;  1MBT A;  1ZR6 A;  3LAE A;  5AWV A;  3AN1 A;  3VTE A;  4PVH A;  4XLO A;  1HSK A;  2AXR A;  1F0X A;  1RM6 B;  2EXR A;  1W1Q A;  1FFV C;  1W1R A;  4BBY A;  3DQ0 A;  4JAY A;  4PVJ A;  3S1E A;  2P3H A;  1W1K A;  2VFR A;  1WYG A;  4HG0 A;  3RJA A;  1N5X A;  5G5G B;  4PVE A;  1W1M A;  4BCA A;  1SB3 B;  3NVW B;  1W1L A;  3TSH A;  4PWB A;  5FXE A;  2GQU A;  2W54 A;  2RK5 A;  3D2D A;  2IPI A;  2UUU A;  3GSY A;  3NVZ B;  2WDW A;  1UXY A;  2BVF A;  2Q85 A;  1E8F A;  2E3T A;  1E0Y A;  5HQX A;  4BC9 A;  3EUB 3;  3FW7 A;  4O95 A;  3FWA A;  2W55 A;  1N60 C;  1DIQ A;  1VDV A;  4ML8 A;  3AM9 A;  3B9J B;  5I1V A;  2VAO A;  1AHZ A;  3HSU A;  1AHV A;  1ZXI C;  4PVK A;  1N63 C;  3S1F A;  1DII A;  3D2H A;  2VFT A;  1JRO A;  1T3Q C;  3AMZ A;  1FFU C;  1W1O A;  4PYT A;  2Y3S A;  1WVF A;  2R8D A;  3KJM A;  4EC3 A;  5G5H B;  3D2J A;  4UD8 A;  5FXD A;  2MBR A;  3W8Z A;  3S1D A;  3S1C A;  5ADZ A;  2GQT A;  5AE3 A;  3W8W A;  3PQB A;  5AE1 A;  1N61 C;  2YVS A;  2W3R A;  1E8H A;  3PM9 A;  3NVV B;  5L6G A;  3SR6 B;  3POP A;  2NQW A;  5I1W A;  1QLT A;  2OAI A;  3NS1 B;  2Y3R A;  1FIQ B;  2Q4W A;  3DED A;  1V97 A;  2BVH A;  4ZOH B;  5K8E A;  4PZF A;  2Y4G A;  2O3G A;  3W8X A;  3NVY B;  5FXP A;  3NRZ B;  5HMR A;  3TX1 A;  5HHZ A;  3JS8 A;  4MLA A;  3RJ8 A;  2I0K A;  4OAL A;  2VFS A;  3ETR B;  1WVE A;  2PLS A;  1N5W C;  3C0P A;  1N62 C;  1W1J A;  2VFV A;  4DNS A;  2Y08 A;  5L6F A;  1W1S A;  2QPM A;  4PWC A;  1VAO A;  3TSJ A;  1DZN A;  1QLU A;  1AHU A;  2VFU A;  3BW7 A;  3FW9 A;  2R2Z A;  2P4P A;  2QKN A;  3HRD C;  3I99 A;  1I19 A;  3FW8 A;  4JB1 A;  3LLB A;  4BC7 A;  2PLI A;  2W3S A;  2BVG A;  2UUV A;  1FO4 A;  1MBB A;  5D79 A;  5FXF A;  2P13 A;  5AE2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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