3HSUA

Functional roles of the 6-s-cysteinyl, 8 alpha-n1-histidyl fad in glucooligosaccharide oxidase from acremonium strictum
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
475
structure length
475
Chain Sequence
NSINACLAAADVEFHEEDSEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVDDNNVATIQGGARLGYTALELLDQGNRALSHGTAPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPRELSMRLEINANALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLYGADLNITYNYDVHEYFYANSLTAPRLSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRDQLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLTKEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Glucooligosaccharide oxidase
publication title Functional roles of the 6-S-cysteinyl, 8alpha-N1-histidyl FAD in glucooligosaccharide oxidase from Acremonium strictum
pubmed doi rcsb
source organism Acremonium strictum
total genus 159
structure length 475
sequence length 475
ec nomenclature ec 1.1.3.-:
pdb deposition date 2009-06-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.465.40 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3hsuA01
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3hsuA02
5D79A 3HSUA 3D2DA 3D2HA 4PZFA 3RJ8A 4PWCA 4DNSA 3W8XA 3FWAA 4PWBA 4EC3A 2WDWA 2Y3SA 5AWVA 5L6GA 4PVKA 4PVHA 4UD8A 3RJAA 4PVJA 2BVGA 5I1VA 3FW7A 3POPA 1ZR6A 2AXRA 3W8WA 3TSHA 2IPIA 4PVEA 2Y08A 3VTEA 5L6FA 3GSYA 3FW8A 2Y4GA 3D2JA 2UUUA 5I1WA 3W8ZA 2BVHA 2UUVA 3FW9A 5K8EA 3PQBA 4XLOA 3TSJA 2BVFA 2Y3RA
chains in the Genus database with same CATH superfamily
5D79A 3DQ0A 3D2HA 4PZFA 5FXEA 1DZNA 2PLIA 1E8GA 3S1DA 2YVSA 1W1LA 2VFSA 3TX1A 2Y3SA 3ETRB 4BC9A 4PVJA 5ADZA 2BVGA 2P3HA 3FW7A 1AHVA 1E0YA 2Q85A 2R2ZA 3B9JB 2AXRA 1QLTA 3NVYB 3POPA 3TSHA 2IPIA 2R8DA 2Y08A 5G5HB 3W8WA 3GSYA 2O3GA 3FW8A 3KJMA 2UUUA 4BCAA 2P13A 1FIQB 4ML8A 4PYTA 3LLBA 3PM9A 3TSJA 1N63C 3NS1B 2W3RA 1WYGA 3I99A 3AMZA 2QPMA 4BBYA 1VAOA 2QKNA 1QLUA 1E8HA 1I19A 3W8XA 4EC3A 5HMRA 2E3TA 2W55A 3EUB3 5AWVA 5AE2A 2VAOA 3S1CA 3RJAA 2OAIA 4JAYA 1V97A 3JS8A 1RM6B 1E8FA 5L6FA 1MBBA 5FXDA 5FXPA 3W8ZA 4BC7A 1JROA 2UUVA 2NQWA 5K8EA 5AE1A 1W1OA 1DIIA 2BVFA 2W3SA 2RK5A 4O95A 2GQUA 3RJ8A 1VDVA 4DNSA 2W54A 5HHZA 1UXYA 1AHZA 3NRZB 3NVVB 4PVKA 4PVHA 2MBRA 4UD8A 1W1JA 3AM9A 4OALA 1HSKA 4HG0A 1WVEA 1W1MA 4PVEA 1W1SA 1WVFA 3S1EA 1MBTA 4JB1A 2VFVA 3FW9A 4XLOA 1N60C 5FXFA 1FO4A 1JRPA 2Y3RA 4ZOHB 3S1FA 3HSUA 3D2DA 1AHUA 2I0KA 1T3QC 2P4PA 2Q4WA 1SB3B 1N5WC 1FFVC 4PWCA 3BW7A 3FWAA 4PWBA 5G5GB 2WDWA 1N5XA 3DEDA 5L6GA 1W1RA 2GQTA 2VFTA 3AN1A 1DIQA 1F0XA 2EXRA 5I1VA 2PLSA 3LAEA 1N61C 1ZR6A 3C0PA 1W1QA 1FFUC 5AE3A 3VTEA 1W1KA 2Y4GA 1N62C 3D2JA 5I1WA 2VFRA 3NVZB 3SR6B 2BVHA 2VFUA 3PQBA 4MLAA 5HQXA 3HRDC 3NVWB 1ZXIC
chains in the Genus database with same CATH topology
5D79A 3DQ0A 3D2HA 4PZFA 5FXEA 1DZNA 2PLIA 1E8GA 3S1DA 2YVSA 1W1LA 2VFSA 3TX1A 2Y3SA 3ETRB 4BC9A 4PVJA 5ADZA 2BVGA 2P3HA 3FW7A 1AHVA 1E0YA 2Q85A 2R2ZA 3B9JB 2AXRA 1QLTA 3NVYB 3POPA 3TSHA 2IPIA 2R8DA 2Y08A 5G5HB 3W8WA 3GSYA 2O3GA 3FW8A 3KJMA 2UUUA 4BCAA 2P13A 1FIQB 4ML8A 4PYTA 3LLBA 3PM9A 3TSJA 1N63C 3NS1B 2W3RA 1WYGA 3I99A 3AMZA 2QPMA 4BBYA 1VAOA 2QKNA 1QLUA 1E8HA 1I19A 3W8XA 4EC3A 5HMRA 2E3TA 2W55A 3EUB3 5AWVA 5AE2A 2VAOA 3S1CA 3RJAA 2OAIA 4JAYA 1V97A 3JS8A 1RM6B 1E8FA 5L6FA 1MBBA 5FXDA 5FXPA 3W8ZA 4BC7A 1JROA 2UUVA 2NQWA 5K8EA 5AE1A 1W1OA 1DIIA 2BVFA 2W3SA 2RK5A 4O95A 2GQUA 3RJ8A 1VDVA 4DNSA 2W54A 5HHZA 1UXYA 1AHZA 3NRZB 3NVVB 4PVKA 4PVHA 2MBRA 4UD8A 1W1JA 3AM9A 4OALA 1HSKA 4HG0A 1WVEA 1W1MA 4PVEA 1W1SA 1WVFA 3S1EA 1MBTA 4JB1A 2VFVA 3FW9A 4XLOA 1N60C 5FXFA 1FO4A 1JRPA 2Y3RA 4ZOHB 3S1FA 3HSUA 3D2DA 1AHUA 2I0KA 1T3QC 2P4PA 2Q4WA 1SB3B 1N5WC 1FFVC 4PWCA 3BW7A 3FWAA 4PWBA 5G5GB 2WDWA 1N5XA 3DEDA 5L6GA 1W1RA 2GQTA 2VFTA 3AN1A 1DIQA 1F0XA 2EXRA 5I1VA 2PLSA 3LAEA 1N61C 1ZR6A 3C0PA 1W1QA 1FFUC 5AE3A 3VTEA 1W1KA 2Y4GA 1N62C 3D2JA 5I1WA 2VFRA 3NVZB 3SR6B 2BVHA 2VFUA 3PQBA 4MLAA 5HQXA 3HRDC 3NVWB 1ZXIC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5D79 A;  3HSU A;  3D2D A;  3D2H A;  4PZF A;  3RJ8 A;  4PWC A;  4DNS A;  3W8X A;  3FWA A;  4PWB A;  4EC3 A;  2WDW A;  2Y3S A;  5AWV A;  5L6G A;  4PVK A;  4PVH A;  4UD8 A;  3RJA A;  4PVJ A;  2BVG A;  5I1V A;  3FW7 A;  3POP A;  1ZR6 A;  2AXR A;  3W8W A;  3TSH A;  2IPI A;  4PVE A;  2Y08 A;  3VTE A;  5L6F A;  3GSY A;  3FW8 A;  2Y4G A;  3D2J A;  2UUU A;  5I1W A;  3W8Z A;  2BVH A;  2UUV A;  3FW9 A;  5K8E A;  3PQB A;  4XLO A;  3TSJ A;  2BVF A;  2Y3R A; 
#chains in the Genus database with same CATH topology
 5D79 A;  3DQ0 A;  3D2H A;  4PZF A;  5FXE A;  1DZN A;  2PLI A;  1E8G A;  3S1D A;  2YVS A;  1W1L A;  2VFS A;  3TX1 A;  2Y3S A;  3ETR B;  4BC9 A;  4PVJ A;  5ADZ A;  2BVG A;  2P3H A;  3FW7 A;  1AHV A;  1E0Y A;  2Q85 A;  2R2Z A;  3B9J B;  2AXR A;  1QLT A;  3NVY B;  3POP A;  3TSH A;  2IPI A;  2R8D A;  2Y08 A;  5G5H B;  3W8W A;  3GSY A;  2O3G A;  3FW8 A;  3KJM A;  2UUU A;  4BCA A;  2P13 A;  1FIQ B;  4ML8 A;  4PYT A;  3LLB A;  3PM9 A;  3TSJ A;  1N63 C;  3NS1 B;  2W3R A;  1WYG A;  3I99 A;  3AMZ A;  2QPM A;  4BBY A;  1VAO A;  2QKN A;  1QLU A;  1E8H A;  1I19 A;  3W8X A;  4EC3 A;  5HMR A;  2E3T A;  2W55 A;  3EUB 3;  5AWV A;  5AE2 A;  2VAO A;  3S1C A;  3RJA A;  2OAI A;  4JAY A;  1V97 A;  3JS8 A;  1RM6 B;  1E8F A;  5L6F A;  1MBB A;  5FXD A;  5FXP A;  3W8Z A;  4BC7 A;  1JRO A;  2UUV A;  2NQW A;  5K8E A;  5AE1 A;  1W1O A;  1DII A;  2BVF A;  2W3S A;  2RK5 A;  4O95 A;  2GQU A;  3RJ8 A;  1VDV A;  4DNS A;  2W54 A;  5HHZ A;  1UXY A;  1AHZ A;  3NRZ B;  3NVV B;  4PVK A;  4PVH A;  2MBR A;  4UD8 A;  1W1J A;  3AM9 A;  4OAL A;  1HSK A;  4HG0 A;  1WVE A;  1W1M A;  4PVE A;  1W1S A;  1WVF A;  3S1E A;  1MBT A;  4JB1 A;  2VFV A;  3FW9 A;  4XLO A;  1N60 C;  5FXF A;  1FO4 A;  1JRP A;  2Y3R A;  4ZOH B;  3S1F A;  3HSU A;  3D2D A;  1AHU A;  2I0K A;  1T3Q C;  2P4P A;  2Q4W A;  1SB3 B;  1N5W C;  1FFV C;  4PWC A;  3BW7 A;  3FWA A;  4PWB A;  5G5G B;  2WDW A;  1N5X A;  3DED A;  5L6G A;  1W1R A;  2GQT A;  2VFT A;  3AN1 A;  1DIQ A;  1F0X A;  2EXR A;  5I1V A;  2PLS A;  3LAE A;  1N61 C;  1ZR6 A;  3C0P A;  1W1Q A;  1FFU C;  5AE3 A;  3VTE A;  1W1K A;  2Y4G A;  1N62 C;  3D2J A;  5I1W A;  2VFR A;  3NVZ B;  3SR6 B;  2BVH A;  2VFU A;  3PQB A;  4MLA A;  5HQX A;  3HRD C;  3NVW B;  1ZXI C; 
#chains in the Genus database with same CATH homology
 5D79 A;  3DQ0 A;  3D2H A;  4PZF A;  5FXE A;  1DZN A;  2PLI A;  1E8G A;  3S1D A;  2YVS A;  1W1L A;  2VFS A;  3TX1 A;  2Y3S A;  3ETR B;  4BC9 A;  4PVJ A;  5ADZ A;  2BVG A;  2P3H A;  3FW7 A;  1AHV A;  1E0Y A;  2Q85 A;  2R2Z A;  3B9J B;  2AXR A;  1QLT A;  3NVY B;  3POP A;  3TSH A;  2IPI A;  2R8D A;  2Y08 A;  5G5H B;  3W8W A;  3GSY A;  2O3G A;  3FW8 A;  3KJM A;  2UUU A;  4BCA A;  2P13 A;  1FIQ B;  4ML8 A;  4PYT A;  3LLB A;  3PM9 A;  3TSJ A;  1N63 C;  3NS1 B;  2W3R A;  1WYG A;  3I99 A;  3AMZ A;  2QPM A;  4BBY A;  1VAO A;  2QKN A;  1QLU A;  1E8H A;  1I19 A;  3W8X A;  4EC3 A;  5HMR A;  2E3T A;  2W55 A;  3EUB 3;  5AWV A;  5AE2 A;  2VAO A;  3S1C A;  3RJA A;  2OAI A;  4JAY A;  1V97 A;  3JS8 A;  1RM6 B;  1E8F A;  5L6F A;  1MBB A;  5FXD A;  5FXP A;  3W8Z A;  4BC7 A;  1JRO A;  2UUV A;  2NQW A;  5K8E A;  5AE1 A;  1W1O A;  1DII A;  2BVF A;  2W3S A;  2RK5 A;  4O95 A;  2GQU A;  3RJ8 A;  1VDV A;  4DNS A;  2W54 A;  5HHZ A;  1UXY A;  1AHZ A;  3NRZ B;  3NVV B;  4PVK A;  4PVH A;  2MBR A;  4UD8 A;  1W1J A;  3AM9 A;  4OAL A;  1HSK A;  4HG0 A;  1WVE A;  1W1M A;  4PVE A;  1W1S A;  1WVF A;  3S1E A;  1MBT A;  4JB1 A;  2VFV A;  3FW9 A;  4XLO A;  1N60 C;  5FXF A;  1FO4 A;  1JRP A;  2Y3R A;  4ZOH B;  3S1F A;  3HSU A;  3D2D A;  1AHU A;  2I0K A;  1T3Q C;  2P4P A;  2Q4W A;  1SB3 B;  1N5W C;  1FFV C;  4PWC A;  3BW7 A;  3FWA A;  4PWB A;  5G5G B;  2WDW A;  1N5X A;  3DED A;  5L6G A;  1W1R A;  2GQT A;  2VFT A;  3AN1 A;  1DIQ A;  1F0X A;  2EXR A;  5I1V A;  2PLS A;  3LAE A;  1N61 C;  1ZR6 A;  3C0P A;  1W1Q A;  1FFU C;  5AE3 A;  3VTE A;  1W1K A;  2Y4G A;  1N62 C;  3D2J A;  5I1W A;  2VFR A;  3NVZ B;  3SR6 B;  2BVH A;  2VFU A;  3PQB A;  4MLA A;  5HQX A;  3HRD C;  3NVW B;  1ZXI C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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