3HSUA

Functional roles of the 6-s-cysteinyl, 8 alpha-n1-histidyl fad in glucooligosaccharide oxidase from acremonium strictum
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
475
structure length
475
Chain Sequence
NSINACLAAADVEFHEEDSEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVDDNNVATIQGGARLGYTALELLDQGNRALSHGTAPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPRELSMRLEINANALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLYGADLNITYNYDVHEYFYANSLTAPRLSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRDQLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLTKEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Functional roles of the 6-S-cysteinyl, 8alpha-N1-histidyl FAD in glucooligosaccharide oxidase from Acremonium strictum
pubmed doi rcsb
source organism Acremonium strictum
molecule tags Oxidoreductase
molecule keywords Glucooligosaccharide oxidase
total genus 159
structure length 475
sequence length 475
ec nomenclature ec 1.1.3.-:
pdb deposition date 2009-06-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.465.40 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3hsuA01
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3hsuA02
2UUVA 2Y3RA 2IPIA 3D2HA 3W8WA 5I1VA 2Y08A 3FW7A 5AWVA 5D79A 4DNSA 2AXRA 3POPA 5L6FA 2BVFA 3D2JA 3W8XA 4PZFA 4PVKA 3VTEA 2Y3SA 2BVGA 4PVHA 3TSJA 3D2DA 4PWBA 4XLOA 2UUUA 2WDWA 3FW9A 3HSUA 2Y4GA 3RJ8A 3FWAA 3W8ZA 3PQBA 1ZR6A 2BVHA 3RJAA 3GSYA 5I1WA 4PVJA 4PWCA 4PVEA 3FW8A 4UD8A 3TSHA 4EC3A 5L6GA 5K8EA
chains in the Genus database with same CATH superfamily
2Y3RA 3NVVB 2YVSA 1N5WC 1SB3B 4BC7A 2IPIA 5I1VA 2EXRA 3S1DA 1AHZA 3B9JB 1N62C 2W3RA 1AHVA 1WVEA 3FW7A 3NVWB 2PLIA 2MBRA 2VFTA 2BVFA 3S1FA 5G5GB 2BVGA 2Y3SA 3AN1A 1VAOA 3DEDA 3HRDC 3AMZA 2W3SA 3RJ8A 1AHUA 1WVFA 3RJAA 4PVJA 5I1WA 1W1JA 2R2ZA 3DQ0A 3FW8A 5AE3A 4UD8A 3NS1B 1VDVA 2QKNA 5L6FA 5L6GA 2R8DA 3NVZB 4OALA 2Q85A 2OAIA 5D79A 4O95A 1T3QC 3D2JA 4BCAA 1FO4A 1JROA 5HHZA 3TSJA 3S1CA 3LLBA 4PWBA 2P4PA 4XLOA 1HSKA 4JAYA 2E3TA 1E8HA 1FIQB 3BW7A 2GQUA 3HSUA 2Y4GA 4BBYA 2Q4WA 1W1OA 4PVEA 1W1LA 3I99A 5FXFA 3LAEA 2P13A 3C0PA 5FXPA 4EC3A 2W55A 2UUVA 1MBTA 5G5HB 1DIQA 3W8WA 1JRPA 2Y08A 1I19A 1E0YA 4DNSA 2AXRA 2VFUA 3TX1A 4MLAA 3W8XA 1E8FA 3NRZB 4PVKA 3VTEA 3D2DA 5FXEA 4JB1A 5AE1A 1DIIA 1W1KA 2WDWA 5FXDA 1N63C 3PM9A 2BVHA 1ZR6A 3PQBA 2P3HA 2VFVA 2O3GA 4HG0A 1DZNA 3TSHA 3NVYB 1N60C 5K8EA 1E8GA 1QLUA 2VFSA 4ZOHB 3D2HA 5ADZA 1W1SA 1N5XA 3S1EA 1F0XA 1ZXIC 2VAOA 2GQTA 3AM9A 5AWVA 5AE2A 3ETRB 1MBBA 3POPA 1W1QA 1W1RA 3EUB3 4PYTA 4PZFA 4PVHA 1RM6B 1QLTA 3KJMA 4ML8A 2UUUA 4BC9A 1FFUC 3FW9A 1UXYA 1W1MA 2W54A 3FWAA 1V97A 2PLSA 1N61C 1FFVC 3SR6B 2VFRA 3GSYA 2RK5A 2I0KA 3JS8A 4PWCA 3W8ZA 5HQXA 1WYGA 2QPMA 5HMRA 2NQWA
chains in the Genus database with same CATH topology
2Y3RA 3NVVB 2YVSA 1N5WC 1SB3B 4BC7A 2IPIA 5I1VA 2EXRA 3S1DA 1AHZA 3B9JB 1N62C 2W3RA 1AHVA 1WVEA 3FW7A 3NVWB 2PLIA 2MBRA 2VFTA 2BVFA 3S1FA 5G5GB 2BVGA 2Y3SA 3AN1A 1VAOA 3DEDA 3HRDC 3AMZA 2W3SA 3RJ8A 1AHUA 1WVFA 3RJAA 4PVJA 5I1WA 1W1JA 2R2ZA 3DQ0A 3FW8A 5AE3A 4UD8A 3NS1B 1VDVA 2QKNA 5L6FA 5L6GA 2R8DA 3NVZB 4OALA 2Q85A 2OAIA 5D79A 4O95A 1T3QC 3D2JA 4BCAA 1FO4A 1JROA 5HHZA 3TSJA 3S1CA 3LLBA 4PWBA 2P4PA 4XLOA 1HSKA 4JAYA 2E3TA 1E8HA 1FIQB 3BW7A 2GQUA 3HSUA 2Y4GA 4BBYA 2Q4WA 1W1OA 4PVEA 1W1LA 3I99A 5FXFA 3LAEA 2P13A 3C0PA 5FXPA 4EC3A 2W55A 2UUVA 1MBTA 5G5HB 1DIQA 3W8WA 1JRPA 2Y08A 1I19A 1E0YA 4DNSA 2AXRA 2VFUA 3TX1A 4MLAA 3W8XA 1E8FA 3NRZB 4PVKA 3VTEA 3D2DA 5FXEA 4JB1A 5AE1A 1DIIA 1W1KA 2WDWA 5FXDA 1N63C 3PM9A 2BVHA 1ZR6A 3PQBA 2P3HA 2VFVA 2O3GA 4HG0A 1DZNA 3TSHA 3NVYB 1N60C 5K8EA 1E8GA 1QLUA 2VFSA 4ZOHB 3D2HA 5ADZA 1W1SA 1N5XA 3S1EA 1F0XA 1ZXIC 2VAOA 2GQTA 3AM9A 5AWVA 5AE2A 3ETRB 1MBBA 3POPA 1W1QA 1W1RA 3EUB3 4PYTA 4PZFA 4PVHA 1RM6B 1QLTA 3KJMA 4ML8A 2UUUA 4BC9A 1FFUC 3FW9A 1UXYA 1W1MA 2W54A 3FWAA 1V97A 2PLSA 1N61C 1FFVC 3SR6B 2VFRA 3GSYA 2RK5A 2I0KA 3JS8A 4PWCA 3W8ZA 5HQXA 1WYGA 2QPMA 5HMRA 2NQWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2UUV A;  2Y3R A;  2IPI A;  3D2H A;  3W8W A;  5I1V A;  2Y08 A;  3FW7 A;  5AWV A;  5D79 A;  4DNS A;  2AXR A;  3POP A;  5L6F A;  2BVF A;  3D2J A;  3W8X A;  4PZF A;  4PVK A;  3VTE A;  2Y3S A;  2BVG A;  4PVH A;  3TSJ A;  3D2D A;  4PWB A;  4XLO A;  2UUU A;  2WDW A;  3FW9 A;  3HSU A;  2Y4G A;  3RJ8 A;  3FWA A;  3W8Z A;  3PQB A;  1ZR6 A;  2BVH A;  3RJA A;  3GSY A;  5I1W A;  4PVJ A;  4PWC A;  4PVE A;  3FW8 A;  4UD8 A;  3TSH A;  4EC3 A;  5L6G A;  5K8E A; 
#chains in the Genus database with same CATH topology
 2Y3R A;  3NVV B;  2YVS A;  1N5W C;  1SB3 B;  4BC7 A;  2IPI A;  5I1V A;  2EXR A;  3S1D A;  1AHZ A;  3B9J B;  1N62 C;  2W3R A;  1AHV A;  1WVE A;  3FW7 A;  3NVW B;  2PLI A;  2MBR A;  2VFT A;  2BVF A;  3S1F A;  5G5G B;  2BVG A;  2Y3S A;  3AN1 A;  1VAO A;  3DED A;  3HRD C;  3AMZ A;  2W3S A;  3RJ8 A;  1AHU A;  1WVF A;  3RJA A;  4PVJ A;  5I1W A;  1W1J A;  2R2Z A;  3DQ0 A;  3FW8 A;  5AE3 A;  4UD8 A;  3NS1 B;  1VDV A;  2QKN A;  5L6F A;  5L6G A;  2R8D A;  3NVZ B;  4OAL A;  2Q85 A;  2OAI A;  5D79 A;  4O95 A;  1T3Q C;  3D2J A;  4BCA A;  1FO4 A;  1JRO A;  5HHZ A;  3TSJ A;  3S1C A;  3LLB A;  4PWB A;  2P4P A;  4XLO A;  1HSK A;  4JAY A;  2E3T A;  1E8H A;  1FIQ B;  3BW7 A;  2GQU A;  3HSU A;  2Y4G A;  4BBY A;  2Q4W A;  1W1O A;  4PVE A;  1W1L A;  3I99 A;  5FXF A;  3LAE A;  2P13 A;  3C0P A;  5FXP A;  4EC3 A;  2W55 A;  2UUV A;  1MBT A;  5G5H B;  1DIQ A;  3W8W A;  1JRP A;  2Y08 A;  1I19 A;  1E0Y A;  4DNS A;  2AXR A;  2VFU A;  3TX1 A;  4MLA A;  3W8X A;  1E8F A;  3NRZ B;  4PVK A;  3VTE A;  3D2D A;  5FXE A;  4JB1 A;  5AE1 A;  1DII A;  1W1K A;  2WDW A;  5FXD A;  1N63 C;  3PM9 A;  2BVH A;  1ZR6 A;  3PQB A;  2P3H A;  2VFV A;  2O3G A;  4HG0 A;  1DZN A;  3TSH A;  3NVY B;  1N60 C;  5K8E A;  1E8G A;  1QLU A;  2VFS A;  4ZOH B;  3D2H A;  5ADZ A;  1W1S A;  1N5X A;  3S1E A;  1F0X A;  1ZXI C;  2VAO A;  2GQT A;  3AM9 A;  5AWV A;  5AE2 A;  3ETR B;  1MBB A;  3POP A;  1W1Q A;  1W1R A;  3EUB 3;  4PYT A;  4PZF A;  4PVH A;  1RM6 B;  1QLT A;  3KJM A;  4ML8 A;  2UUU A;  4BC9 A;  1FFU C;  3FW9 A;  1UXY A;  1W1M A;  2W54 A;  3FWA A;  1V97 A;  2PLS A;  1N61 C;  1FFV C;  3SR6 B;  2VFR A;  3GSY A;  2RK5 A;  2I0K A;  3JS8 A;  4PWC A;  3W8Z A;  5HQX A;  1WYG A;  2QPM A;  5HMR A;  2NQW A; 
#chains in the Genus database with same CATH homology
 2Y3R A;  3NVV B;  2YVS A;  1N5W C;  1SB3 B;  4BC7 A;  2IPI A;  5I1V A;  2EXR A;  3S1D A;  1AHZ A;  3B9J B;  1N62 C;  2W3R A;  1AHV A;  1WVE A;  3FW7 A;  3NVW B;  2PLI A;  2MBR A;  2VFT A;  2BVF A;  3S1F A;  5G5G B;  2BVG A;  2Y3S A;  3AN1 A;  1VAO A;  3DED A;  3HRD C;  3AMZ A;  2W3S A;  3RJ8 A;  1AHU A;  1WVF A;  3RJA A;  4PVJ A;  5I1W A;  1W1J A;  2R2Z A;  3DQ0 A;  3FW8 A;  5AE3 A;  4UD8 A;  3NS1 B;  1VDV A;  2QKN A;  5L6F A;  5L6G A;  2R8D A;  3NVZ B;  4OAL A;  2Q85 A;  2OAI A;  5D79 A;  4O95 A;  1T3Q C;  3D2J A;  4BCA A;  1FO4 A;  1JRO A;  5HHZ A;  3TSJ A;  3S1C A;  3LLB A;  4PWB A;  2P4P A;  4XLO A;  1HSK A;  4JAY A;  2E3T A;  1E8H A;  1FIQ B;  3BW7 A;  2GQU A;  3HSU A;  2Y4G A;  4BBY A;  2Q4W A;  1W1O A;  4PVE A;  1W1L A;  3I99 A;  5FXF A;  3LAE A;  2P13 A;  3C0P A;  5FXP A;  4EC3 A;  2W55 A;  2UUV A;  1MBT A;  5G5H B;  1DIQ A;  3W8W A;  1JRP A;  2Y08 A;  1I19 A;  1E0Y A;  4DNS A;  2AXR A;  2VFU A;  3TX1 A;  4MLA A;  3W8X A;  1E8F A;  3NRZ B;  4PVK A;  3VTE A;  3D2D A;  5FXE A;  4JB1 A;  5AE1 A;  1DII A;  1W1K A;  2WDW A;  5FXD A;  1N63 C;  3PM9 A;  2BVH A;  1ZR6 A;  3PQB A;  2P3H A;  2VFV A;  2O3G A;  4HG0 A;  1DZN A;  3TSH A;  3NVY B;  1N60 C;  5K8E A;  1E8G A;  1QLU A;  2VFS A;  4ZOH B;  3D2H A;  5ADZ A;  1W1S A;  1N5X A;  3S1E A;  1F0X A;  1ZXI C;  2VAO A;  2GQT A;  3AM9 A;  5AWV A;  5AE2 A;  3ETR B;  1MBB A;  3POP A;  1W1Q A;  1W1R A;  3EUB 3;  4PYT A;  4PZF A;  4PVH A;  1RM6 B;  1QLT A;  3KJM A;  4ML8 A;  2UUU A;  4BC9 A;  1FFU C;  3FW9 A;  1UXY A;  1W1M A;  2W54 A;  3FWA A;  1V97 A;  2PLS A;  1N61 C;  1FFV C;  3SR6 B;  2VFR A;  3GSY A;  2RK5 A;  2I0K A;  3JS8 A;  4PWC A;  3W8Z A;  5HQX A;  1WYG A;  2QPM A;  5HMR A;  2NQW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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