3HSUA

Functional roles of the 6-s-cysteinyl, 8 alpha-n1-histidyl fad in glucooligosaccharide oxidase from acremonium strictum
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
475
structure length
475
Chain Sequence
NSINACLAAADVEFHEEDSEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVDDNNVATIQGGARLGYTALELLDQGNRALSHGTAPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPRELSMRLEINANALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLYGADLNITYNYDVHEYFYANSLTAPRLSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRDQLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLTKEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIAY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Glucooligosaccharide oxidase
publication title Functional roles of the 6-S-cysteinyl, 8alpha-N1-histidyl FAD in glucooligosaccharide oxidase from Acremonium strictum
pubmed doi rcsb
source organism Acremonium strictum
molecule tags Oxidoreductase
total genus 159
structure length 475
sequence length 475
ec nomenclature ec 1.1.3.-:
pdb deposition date 2009-06-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.465.40 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3hsuA01
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3hsuA02
4PVJA 5D79A 3FW8A 2IPIA 3TSJA 5AWVA 3TSHA 3W8WA 2Y3SA 3RJAA 2Y08A 5I1VA 2BVGA 3VTEA 5L6GA 4UD8A 3FW7A 3D2DA 3D2HA 3RJ8A 2Y3RA 3GSYA 4PWBA 3POPA 4XLOA 3W8ZA 2UUUA 3PQBA 3FWAA 4PWCA 3FW9A 2UUVA 3HSUA 1ZR6A 4PVEA 2WDWA 3D2JA 4PZFA 2BVFA 4PVKA 4DNSA 2AXRA 4PVHA 3W8XA 2Y4GA 5L6FA 5I1WA 2BVHA 5K8EA 4EC3A
chains in the Genus database with same CATH superfamily
2E3TA 1VAOA 3FW8A 2IPIA 2R8DA 1E8GA 3TSHA 1MBBA 3RJAA 5I1VA 1DIIA 1E8HA 3S1DA 3SR6B 3VTEA 1T3QC 1W1OA 1AHUA 2W3SA 4UD8A 2VFTA 2VFSA 2YVSA 3S1EA 2VAOA 2W54A 4PWBA 2GQUA 2UUUA 3PQBA 1VDVA 3AN1A 3LAEA 2Q85A 3FW9A 2UUVA 1ZXIC 2W55A 3HSUA 2PLSA 3KJMA 2VFRA 3NVWB 3C0PA 2BVFA 5L6FA 2BVHA 1N61C 4PVJA 3B9JB 2EXRA 3AMZA 3W8WA 5HMRA 2Y08A 2OAIA 1WVFA 2QKNA 4ML8A 1FFVC 3D2DA 2VFVA 3NS1B 1HSKA 3RJ8A 3I99A 3DEDA 3S1CA 1W1LA 1N5XA 1W1QA 1JRPA 1W1MA 1W1JA 2MBRA 5AE2A 1RM6B 1JROA 2P13A 5FXDA 1DZNA 1N63C 2RK5A 3BW7A 1N62C 1ZR6A 4PVEA 5FXEA 5FXPA 4DNSA 2P4PA 2AXRA 1W1SA 1V97A 3W8XA 2I0KA 2P3HA 4BCAA 1FIQB 5I1WA 3EUB3 1QLUA 2Q4WA 2NQWA 5AE1A 3TSJA 1W1KA 2Y3SA 3ETRB 2PLIA 3NRZB 2O3GA 5G5GB 1W1RA 1DIQA 3NVVB 3FW7A 4O95A 2Y3RA 1N5WC 1AHZA 1SB3B 3JS8A 3FWAA 5HQXA 1E0YA 2R2ZA 1I19A 3LLBA 4BBYA 3DQ0A 2WDWA 3D2JA 1FFUC 1WYGA 4PZFA 1QLTA 5ADZA 4PVKA 2QPMA 5G5HB 4PVHA 4OALA 5HHZA 2GQTA 5K8EA 1FO4A 4JAYA 5D79A 5AWVA 4HG0A 2BVGA 1UXYA 4BC9A 1AHVA 1F0XA 5L6GA 3HRDC 3PM9A 3AM9A 4MLAA 5FXFA 1E8FA 2VFUA 2W3RA 3D2HA 3NVYB 3TX1A 3GSYA 1WVEA 3POPA 3S1FA 4XLOA 3W8ZA 4PWCA 5AE3A 3NVZB 4ZOHB 1N60C 4JB1A 4BC7A 4PYTA 2Y4GA 1MBTA 4EC3A
chains in the Genus database with same CATH topology
2E3TA 1VAOA 3FW8A 2IPIA 2R8DA 1E8GA 3TSHA 1MBBA 3RJAA 5I1VA 1DIIA 1E8HA 3S1DA 3SR6B 3VTEA 1T3QC 1W1OA 1AHUA 2W3SA 4UD8A 2VFTA 2VFSA 2YVSA 3S1EA 2VAOA 2W54A 4PWBA 2GQUA 2UUUA 3PQBA 1VDVA 3AN1A 3LAEA 2Q85A 3FW9A 2UUVA 1ZXIC 2W55A 3HSUA 2PLSA 3KJMA 2VFRA 3NVWB 3C0PA 2BVFA 5L6FA 2BVHA 1N61C 4PVJA 3B9JB 2EXRA 3AMZA 3W8WA 5HMRA 2Y08A 2OAIA 1WVFA 2QKNA 4ML8A 1FFVC 3D2DA 2VFVA 3NS1B 1HSKA 3RJ8A 3I99A 3DEDA 3S1CA 1W1LA 1N5XA 1W1QA 1JRPA 1W1MA 1W1JA 2MBRA 5AE2A 1RM6B 1JROA 2P13A 5FXDA 1DZNA 1N63C 2RK5A 3BW7A 1N62C 1ZR6A 4PVEA 5FXEA 5FXPA 4DNSA 2P4PA 2AXRA 1W1SA 1V97A 3W8XA 2I0KA 2P3HA 4BCAA 1FIQB 5I1WA 3EUB3 1QLUA 2Q4WA 2NQWA 5AE1A 3TSJA 1W1KA 2Y3SA 3ETRB 2PLIA 3NRZB 2O3GA 5G5GB 1W1RA 1DIQA 3NVVB 3FW7A 4O95A 2Y3RA 1N5WC 1AHZA 1SB3B 3JS8A 3FWAA 5HQXA 1E0YA 2R2ZA 1I19A 3LLBA 4BBYA 3DQ0A 2WDWA 3D2JA 1FFUC 1WYGA 4PZFA 1QLTA 5ADZA 4PVKA 2QPMA 5G5HB 4PVHA 4OALA 5HHZA 2GQTA 5K8EA 1FO4A 4JAYA 5D79A 5AWVA 4HG0A 2BVGA 1UXYA 4BC9A 1AHVA 1F0XA 5L6GA 3HRDC 3PM9A 3AM9A 4MLAA 5FXFA 1E8FA 2VFUA 2W3RA 3D2HA 3NVYB 3TX1A 3GSYA 1WVEA 3POPA 3S1FA 4XLOA 3W8ZA 4PWCA 5AE3A 3NVZB 4ZOHB 1N60C 4JB1A 4BC7A 4PYTA 2Y4GA 1MBTA 4EC3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4PVJ A;  5D79 A;  3FW8 A;  2IPI A;  3TSJ A;  5AWV A;  3TSH A;  3W8W A;  2Y3S A;  3RJA A;  2Y08 A;  5I1V A;  2BVG A;  3VTE A;  5L6G A;  4UD8 A;  3FW7 A;  3D2D A;  3D2H A;  3RJ8 A;  2Y3R A;  3GSY A;  4PWB A;  3POP A;  4XLO A;  3W8Z A;  2UUU A;  3PQB A;  3FWA A;  4PWC A;  3FW9 A;  2UUV A;  3HSU A;  1ZR6 A;  4PVE A;  2WDW A;  3D2J A;  4PZF A;  2BVF A;  4PVK A;  4DNS A;  2AXR A;  4PVH A;  3W8X A;  2Y4G A;  5L6F A;  5I1W A;  2BVH A;  5K8E A;  4EC3 A; 
#chains in the Genus database with same CATH topology
 2E3T A;  1VAO A;  3FW8 A;  2IPI A;  2R8D A;  1E8G A;  3TSH A;  1MBB A;  3RJA A;  5I1V A;  1DII A;  1E8H A;  3S1D A;  3SR6 B;  3VTE A;  1T3Q C;  1W1O A;  1AHU A;  2W3S A;  4UD8 A;  2VFT A;  2VFS A;  2YVS A;  3S1E A;  2VAO A;  2W54 A;  4PWB A;  2GQU A;  2UUU A;  3PQB A;  1VDV A;  3AN1 A;  3LAE A;  2Q85 A;  3FW9 A;  2UUV A;  1ZXI C;  2W55 A;  3HSU A;  2PLS A;  3KJM A;  2VFR A;  3NVW B;  3C0P A;  2BVF A;  5L6F A;  2BVH A;  1N61 C;  4PVJ A;  3B9J B;  2EXR A;  3AMZ A;  3W8W A;  5HMR A;  2Y08 A;  2OAI A;  1WVF A;  2QKN A;  4ML8 A;  1FFV C;  3D2D A;  2VFV A;  3NS1 B;  1HSK A;  3RJ8 A;  3I99 A;  3DED A;  3S1C A;  1W1L A;  1N5X A;  1W1Q A;  1JRP A;  1W1M A;  1W1J A;  2MBR A;  5AE2 A;  1RM6 B;  1JRO A;  2P13 A;  5FXD A;  1DZN A;  1N63 C;  2RK5 A;  3BW7 A;  1N62 C;  1ZR6 A;  4PVE A;  5FXE A;  5FXP A;  4DNS A;  2P4P A;  2AXR A;  1W1S A;  1V97 A;  3W8X A;  2I0K A;  2P3H A;  4BCA A;  1FIQ B;  5I1W A;  3EUB 3;  1QLU A;  2Q4W A;  2NQW A;  5AE1 A;  3TSJ A;  1W1K A;  2Y3S A;  3ETR B;  2PLI A;  3NRZ B;  2O3G A;  5G5G B;  1W1R A;  1DIQ A;  3NVV B;  3FW7 A;  4O95 A;  2Y3R A;  1N5W C;  1AHZ A;  1SB3 B;  3JS8 A;  3FWA A;  5HQX A;  1E0Y A;  2R2Z A;  1I19 A;  3LLB A;  4BBY A;  3DQ0 A;  2WDW A;  3D2J A;  1FFU C;  1WYG A;  4PZF A;  1QLT A;  5ADZ A;  4PVK A;  2QPM A;  5G5H B;  4PVH A;  4OAL A;  5HHZ A;  2GQT A;  5K8E A;  1FO4 A;  4JAY A;  5D79 A;  5AWV A;  4HG0 A;  2BVG A;  1UXY A;  4BC9 A;  1AHV A;  1F0X A;  5L6G A;  3HRD C;  3PM9 A;  3AM9 A;  4MLA A;  5FXF A;  1E8F A;  2VFU A;  2W3R A;  3D2H A;  3NVY B;  3TX1 A;  3GSY A;  1WVE A;  3POP A;  3S1F A;  4XLO A;  3W8Z A;  4PWC A;  5AE3 A;  3NVZ B;  4ZOH B;  1N60 C;  4JB1 A;  4BC7 A;  4PYT A;  2Y4G A;  1MBT A;  4EC3 A; 
#chains in the Genus database with same CATH homology
 2E3T A;  1VAO A;  3FW8 A;  2IPI A;  2R8D A;  1E8G A;  3TSH A;  1MBB A;  3RJA A;  5I1V A;  1DII A;  1E8H A;  3S1D A;  3SR6 B;  3VTE A;  1T3Q C;  1W1O A;  1AHU A;  2W3S A;  4UD8 A;  2VFT A;  2VFS A;  2YVS A;  3S1E A;  2VAO A;  2W54 A;  4PWB A;  2GQU A;  2UUU A;  3PQB A;  1VDV A;  3AN1 A;  3LAE A;  2Q85 A;  3FW9 A;  2UUV A;  1ZXI C;  2W55 A;  3HSU A;  2PLS A;  3KJM A;  2VFR A;  3NVW B;  3C0P A;  2BVF A;  5L6F A;  2BVH A;  1N61 C;  4PVJ A;  3B9J B;  2EXR A;  3AMZ A;  3W8W A;  5HMR A;  2Y08 A;  2OAI A;  1WVF A;  2QKN A;  4ML8 A;  1FFV C;  3D2D A;  2VFV A;  3NS1 B;  1HSK A;  3RJ8 A;  3I99 A;  3DED A;  3S1C A;  1W1L A;  1N5X A;  1W1Q A;  1JRP A;  1W1M A;  1W1J A;  2MBR A;  5AE2 A;  1RM6 B;  1JRO A;  2P13 A;  5FXD A;  1DZN A;  1N63 C;  2RK5 A;  3BW7 A;  1N62 C;  1ZR6 A;  4PVE A;  5FXE A;  5FXP A;  4DNS A;  2P4P A;  2AXR A;  1W1S A;  1V97 A;  3W8X A;  2I0K A;  2P3H A;  4BCA A;  1FIQ B;  5I1W A;  3EUB 3;  1QLU A;  2Q4W A;  2NQW A;  5AE1 A;  3TSJ A;  1W1K A;  2Y3S A;  3ETR B;  2PLI A;  3NRZ B;  2O3G A;  5G5G B;  1W1R A;  1DIQ A;  3NVV B;  3FW7 A;  4O95 A;  2Y3R A;  1N5W C;  1AHZ A;  1SB3 B;  3JS8 A;  3FWA A;  5HQX A;  1E0Y A;  2R2Z A;  1I19 A;  3LLB A;  4BBY A;  3DQ0 A;  2WDW A;  3D2J A;  1FFU C;  1WYG A;  4PZF A;  1QLT A;  5ADZ A;  4PVK A;  2QPM A;  5G5H B;  4PVH A;  4OAL A;  5HHZ A;  2GQT A;  5K8E A;  1FO4 A;  4JAY A;  5D79 A;  5AWV A;  4HG0 A;  2BVG A;  1UXY A;  4BC9 A;  1AHV A;  1F0X A;  5L6G A;  3HRD C;  3PM9 A;  3AM9 A;  4MLA A;  5FXF A;  1E8F A;  2VFU A;  2W3R A;  3D2H A;  3NVY B;  3TX1 A;  3GSY A;  1WVE A;  3POP A;  3S1F A;  4XLO A;  3W8Z A;  4PWC A;  5AE3 A;  3NVZ B;  4ZOH B;  1N60 C;  4JB1 A;  4BC7 A;  4PYT A;  2Y4G A;  1MBT A;  4EC3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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