1WVEA

P-cresol methylhydroxylase: alteration of the structure of the flavoprotein subunit upon its binding to the cytochrome subunit
Total Genus 195
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
195
sequence length
515
structure length
515
Chain Sequence
AVLPKGVTQGEFNKAVQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYTPYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLRMSNTIPNSVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLYAALYGTQEQVDVNWKIVTDVFKKLGKGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSEARGSECKKQAAMAKRVLHKYGLDYVAEFIVAPRDMHHVIDVLYDRTNPEETKRADACFNELLDEFEKEGYAVYRVNTRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSGIDLNNDF
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords 4-cresol dehydrogenase [hydroxylating] flavoprotein subunit
publication title p-Cresol Methylhydroxylase: Alteration of the Structure of the Flavoprotein Subunit upon Its Binding to the Cytochrome Subunit
pubmed doi rcsb
source organism Pseudomonas putida
total genus 195
structure length 515
sequence length 515
chains with identical sequence B
ec nomenclature ec 1.17.9.1: 4-methylphenol dehydrogenase (hydroxylating).
pdb deposition date 2004-12-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF02913 FAD-oxidase_C FAD linked oxidases, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.45.10 Mainly Alpha Orthogonal Bundle Vanillyl-alcohol Oxidase; Chain A, domain 4 Vanillyl-alcohol Oxidase; Chain A, domain 4 1wveA04
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 1wveA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 1wveA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 1wveA03
1W1KA 2EXRA 4O95A 2PLIA 3ETRB 3FW8A 1E8GA 2BVGA 4PVKA 1V97A 3D2HA 3W8ZA 5AE2A 3C0PA 1DIQA 1FO4A 3SR6B 3VTEA 4PWBA 3S1EA 1JROA 2I0KA 3S1FA 1JRPA 3LAEA 1VDVA 2GQUA 2R2ZA 2QPMA 1WVEA 1E8HA 5HQXA 3BW7A 5FXFA 1W1MA 4JAYA 4EC3A 4JB1A 4ZOHB 3EUB3 4PYTA 4PZFA 5HHZA 1DIIA 1E0YA 3DQ0A 1RM6B 1AHVA 3FW9A 4PVJA 4BC9A 3W8XA 5AE1A 1N60C 1HSKA 5G5GB 3S1CA 2P4PA 3DEDA 3LLBA 1E8FA 3I99A 1AHUA 1N5WC 2VFTA 2GQTA 2Q85A 3S1DA 1FFUC 2W3SA 3JS8A 1FFVC 2VFSA 4OALA 3TSHA 5AE3A 2R8DA 3KJMA 3NVVB 2P13A 2W55A 3NS1B 3TSJA 1W1LA 1W1JA 5FXDA 1T3QC 1W1SA 4HG0A 4BBYA 5FXPA 2MBRA 2VFRA 1W1QA 2W3RA 4PVHA 2P3HA 2PLSA 2QKNA 3HRDC 3D2DA 3NRZB 1N61C 4PVEA 3PM9A 2NQWA 5D79A 4XLOA 1VAOA 4UD8A 3B9JB 4PWCA 2RK5A 1I19A 2VAOA 3AN1A 5FXEA 2W54A 1N62C 3AMZA 4BCAA 1F0XA 1QLUA 5HMRA 3D2JA 4BC7A 1MBTA 3NVZB 2BVFA 3NVWB 1DZNA 1QLTA 2OAIA 1W1RA 2AXRA 1WVFA 5ADZA 3FWAA 1N5XA 4DNSA 1AHZA 1WYGA 2YVSA 3NVYB 3FW7A 3TX1A 1N63C 1FIQB 4MLAA 1ZXIC 2BVHA 3GSYA 2E3TA 3AM9A 1UXYA 4ML8A 3W8WA 2O3GA 5G5HB 2VFUA 1MBBA 1SB3B 1ZR6A 2Q4WA 2VFVA 1W1OA
chains in the Genus database with same CATH superfamily
1W1KA 2EXRA 4O95A 2PLIA 3ETRB 3FW8A 1E8GA 2BVGA 4PVKA 1V97A 3D2HA 3W8ZA 5AE2A 2Y3SA 3C0PA 1DIQA 1FO4A 5I1WA 3SR6B 3VTEA 4PWBA 3S1EA 1JROA 2I0KA 3S1FA 1JRPA 3LAEA 1VDVA 2GQUA 2R2ZA 2QPMA 1WVEA 1E8HA 5HQXA 3BW7A 5FXFA 3HSUA 1W1MA 4JAYA 4EC3A 4JB1A 4ZOHB 3EUB3 4PYTA 4PZFA 5L6GA 5HHZA 1DIIA 1E0YA 3DQ0A 1RM6B 1AHVA 3FW9A 4PVJA 4BC9A 3W8XA 5AE1A 1N60C 1HSKA 5G5GB 3S1CA 2P4PA 3DEDA 2IPIA 3LLBA 1E8FA 3I99A 3PQBA 1AHUA 1N5WC 2VFTA 3POPA 2GQTA 2Q85A 3S1DA 1FFUC 2W3SA 2Y3RA 3JS8A 1FFVC 2VFSA 4OALA 3TSHA 5AE3A 2R8DA 3KJMA 3NVVB 2P13A 2W55A 3NS1B 3TSJA 1W1LA 1W1JA 5FXDA 1T3QC 1W1SA 4HG0A 4BBYA 5FXPA 2MBRA 2VFRA 1W1QA 2W3RA 4PVHA 3EJBB 2P3HA 2PLSA 5I1VA 2QKNA 2WDWA 3HRDC 3D2DA 3NRZB 1N61C 4PVEA 3PM9A 2NQWA 5D79A 4XLOA 1VAOA 4UD8A 3B9JB 4PWCA 2RK5A 1I19A 2VAOA 2UUUA 2UUVA 3AN1A 3RJAA 5FXEA 2W54A 1N62C 3EJEB 3AMZA 4BCAA 1F0XA 1QLUA 5HMRA 2Y08A 3D2JA 4BC7A 1MBTA 3NVZB 2BVFA 3NVWB 1DZNA 5L6FA 1QLTA 2OAIA 1W1RA 2AXRA 1WVFA 5ADZA 3FWAA 1N5XA 4DNSA 1AHZA 1WYGA 2YVSA 5K8EA 3NVYB 3FW7A 3TX1A 2Y4GA 1N63C 1FIQB 4MLAA 1ZXIC 2BVHA 3EJDB 3GSYA 2E3TA 3AM9A 1UXYA 4ML8A 3W8WA 2O3GA 5G5HB 2VFUA 1MBBA 1SB3B 3RJ8A 1ZR6A 2Q4WA 2VFVA 5AWVA 1W1OA
chains in the Genus database with same CATH topology
1W1KA 2EXRA 4O95A 2PLIA 3ETRB 3FW8A 1E8GA 2BVGA 4PVKA 1V97A 3D2HA 3W8ZA 5AE2A 2Y3SA 3C0PA 1DIQA 1FO4A 5I1WA 3SR6B 3VTEA 4PWBA 3S1EA 1JROA 2I0KA 3S1FA 1JRPA 3LAEA 1VDVA 2GQUA 2R2ZA 2QPMA 1WVEA 1E8HA 5HQXA 3BW7A 5FXFA 3HSUA 1W1MA 4JAYA 4EC3A 4JB1A 4ZOHB 3EUB3 4PYTA 4PZFA 5L6GA 5HHZA 1DIIA 1E0YA 3DQ0A 1RM6B 1AHVA 3FW9A 4PVJA 4BC9A 3W8XA 5AE1A 1N60C 1HSKA 5G5GB 3S1CA 2P4PA 3DEDA 2IPIA 3LLBA 1E8FA 3I99A 3PQBA 1AHUA 1N5WC 2VFTA 3POPA 2GQTA 2Q85A 3S1DA 1FFUC 2W3SA 2Y3RA 3JS8A 1FFVC 2VFSA 4OALA 3TSHA 5AE3A 2R8DA 3KJMA 3NVVB 2P13A 2W55A 3NS1B 3TSJA 1W1LA 1W1JA 5FXDA 1T3QC 1W1SA 4HG0A 4BBYA 5FXPA 2MBRA 2VFRA 1W1QA 2W3RA 4PVHA 2P3HA 2PLSA 5I1VA 2QKNA 2WDWA 3HRDC 3D2DA 3NRZB 1N61C 4PVEA 3PM9A 2NQWA 5D79A 4XLOA 1VAOA 4UD8A 3B9JB 4PWCA 2RK5A 1I19A 2VAOA 2UUUA 2UUVA 3AN1A 3RJAA 5FXEA 2W54A 1N62C 3AMZA 4BCAA 1F0XA 1QLUA 5HMRA 2Y08A 3D2JA 4BC7A 1MBTA 3NVZB 2BVFA 3NVWB 1DZNA 5L6FA 1QLTA 2OAIA 1W1RA 2AXRA 1WVFA 5ADZA 3FWAA 1N5XA 4DNSA 1AHZA 1WYGA 2YVSA 5K8EA 2Y4GA 3FW7A 3TX1A 3NVYB 1N63C 1FIQB 4MLAA 1ZXIC 2BVHA 3GSYA 2E3TA 3AM9A 1UXYA 4ML8A 3W8WA 2O3GA 5G5HB 2VFUA 1MBBA 1SB3B 3RJ8A 1ZR6A 2Q4WA 2VFVA 5AWVA 1W1OA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1W1K A;  2EXR A;  4O95 A;  2PLI A;  3ETR B;  3FW8 A;  1E8G A;  2BVG A;  4PVK A;  1V97 A;  3D2H A;  3W8Z A;  5AE2 A;  3C0P A;  1DIQ A;  1FO4 A;  3SR6 B;  3VTE A;  4PWB A;  3S1E A;  1JRO A;  2I0K A;  3S1F A;  1JRP A;  3LAE A;  1VDV A;  2GQU A;  2R2Z A;  2QPM A;  1WVE A;  1E8H A;  5HQX A;  3BW7 A;  5FXF A;  1W1M A;  4JAY A;  4EC3 A;  4JB1 A;  4ZOH B;  3EUB 3;  4PYT A;  4PZF A;  5HHZ A;  1DII A;  1E0Y A;  3DQ0 A;  1RM6 B;  1AHV A;  3FW9 A;  4PVJ A;  4BC9 A;  3W8X A;  5AE1 A;  1N60 C;  1HSK A;  5G5G B;  3S1C A;  2P4P A;  3DED A;  3LLB A;  1E8F A;  3I99 A;  1AHU A;  1N5W C;  2VFT A;  2GQT A;  2Q85 A;  3S1D A;  1FFU C;  2W3S A;  3JS8 A;  1FFV C;  2VFS A;  4OAL A;  3TSH A;  5AE3 A;  2R8D A;  3KJM A;  3NVV B;  2P13 A;  2W55 A;  3NS1 B;  3TSJ A;  1W1L A;  1W1J A;  5FXD A;  1T3Q C;  1W1S A;  4HG0 A;  4BBY A;  5FXP A;  2MBR A;  2VFR A;  1W1Q A;  2W3R A;  4PVH A;  2P3H A;  2PLS A;  2QKN A;  3HRD C;  3D2D A;  3NRZ B;  1N61 C;  4PVE A;  3PM9 A;  2NQW A;  5D79 A;  4XLO A;  1VAO A;  4UD8 A;  3B9J B;  4PWC A;  2RK5 A;  1I19 A;  2VAO A;  3AN1 A;  5FXE A;  2W54 A;  1N62 C;  3AMZ A;  4BCA A;  1F0X A;  1QLU A;  5HMR A;  3D2J A;  4BC7 A;  1MBT A;  3NVZ B;  2BVF A;  3NVW B;  1DZN A;  1QLT A;  2OAI A;  1W1R A;  2AXR A;  1WVF A;  5ADZ A;  3FWA A;  1N5X A;  4DNS A;  1AHZ A;  1WYG A;  2YVS A;  3NVY B;  3FW7 A;  3TX1 A;  1N63 C;  1FIQ B;  4MLA A;  1ZXI C;  2BVH A;  3GSY A;  2E3T A;  3AM9 A;  1UXY A;  4ML8 A;  3W8W A;  2O3G A;  5G5H B;  2VFU A;  1MBB A;  1SB3 B;  1ZR6 A;  2Q4W A;  2VFV A;  1W1O A; 
#chains in the Genus database with same CATH topology
 1W1K A;  2EXR A;  4O95 A;  2PLI A;  3ETR B;  3FW8 A;  1E8G A;  2BVG A;  4PVK A;  1V97 A;  3D2H A;  3W8Z A;  5AE2 A;  2Y3S A;  3C0P A;  1DIQ A;  1FO4 A;  5I1W A;  3SR6 B;  3VTE A;  4PWB A;  3S1E A;  1JRO A;  2I0K A;  3S1F A;  1JRP A;  3LAE A;  1VDV A;  2GQU A;  2R2Z A;  2QPM A;  1WVE A;  1E8H A;  5HQX A;  3BW7 A;  5FXF A;  3HSU A;  1W1M A;  4JAY A;  4EC3 A;  4JB1 A;  4ZOH B;  3EUB 3;  4PYT A;  4PZF A;  5L6G A;  5HHZ A;  1DII A;  1E0Y A;  3DQ0 A;  1RM6 B;  1AHV A;  3FW9 A;  4PVJ A;  4BC9 A;  3W8X A;  5AE1 A;  1N60 C;  1HSK A;  5G5G B;  3S1C A;  2P4P A;  3DED A;  2IPI A;  3LLB A;  1E8F A;  3I99 A;  3PQB A;  1AHU A;  1N5W C;  2VFT A;  3POP A;  2GQT A;  2Q85 A;  3S1D A;  1FFU C;  2W3S A;  2Y3R A;  3JS8 A;  1FFV C;  2VFS A;  4OAL A;  3TSH A;  5AE3 A;  2R8D A;  3KJM A;  3NVV B;  2P13 A;  2W55 A;  3NS1 B;  3TSJ A;  1W1L A;  1W1J A;  5FXD A;  1T3Q C;  1W1S A;  4HG0 A;  4BBY A;  5FXP A;  2MBR A;  2VFR A;  1W1Q A;  2W3R A;  4PVH A;  3EJB B;  2P3H A;  2PLS A;  5I1V A;  2QKN A;  2WDW A;  3HRD C;  3D2D A;  3NRZ B;  1N61 C;  4PVE A;  3PM9 A;  2NQW A;  5D79 A;  4XLO A;  1VAO A;  4UD8 A;  3B9J B;  4PWC A;  2RK5 A;  1I19 A;  2VAO A;  2UUU A;  2UUV A;  3AN1 A;  3RJA A;  5FXE A;  2W54 A;  1N62 C;  3EJE B;  3AMZ A;  4BCA A;  1F0X A;  1QLU A;  5HMR A;  2Y08 A;  3D2J A;  4BC7 A;  1MBT A;  3NVZ B;  2BVF A;  3NVW B;  1DZN A;  5L6F A;  1QLT A;  2OAI A;  1W1R A;  2AXR A;  1WVF A;  5ADZ A;  3FWA A;  1N5X A;  4DNS A;  1AHZ A;  1WYG A;  2YVS A;  5K8E A;  3NVY B;  3FW7 A;  3TX1 A;  2Y4G A;  1N63 C;  1FIQ B;  4MLA A;  1ZXI C;  2BVH A;  3EJD B;  3GSY A;  2E3T A;  3AM9 A;  1UXY A;  4ML8 A;  3W8W A;  2O3G A;  5G5H B;  2VFU A;  1MBB A;  1SB3 B;  3RJ8 A;  1ZR6 A;  2Q4W A;  2VFV A;  5AWV A;  1W1O A; 
#chains in the Genus database with same CATH homology
 1W1K A;  2EXR A;  4O95 A;  2PLI A;  3ETR B;  3FW8 A;  1E8G A;  2BVG A;  4PVK A;  1V97 A;  3D2H A;  3W8Z A;  5AE2 A;  2Y3S A;  3C0P A;  1DIQ A;  1FO4 A;  5I1W A;  3SR6 B;  3VTE A;  4PWB A;  3S1E A;  1JRO A;  2I0K A;  3S1F A;  1JRP A;  3LAE A;  1VDV A;  2GQU A;  2R2Z A;  2QPM A;  1WVE A;  1E8H A;  5HQX A;  3BW7 A;  5FXF A;  3HSU A;  1W1M A;  4JAY A;  4EC3 A;  4JB1 A;  4ZOH B;  3EUB 3;  4PYT A;  4PZF A;  5L6G A;  5HHZ A;  1DII A;  1E0Y A;  3DQ0 A;  1RM6 B;  1AHV A;  3FW9 A;  4PVJ A;  4BC9 A;  3W8X A;  5AE1 A;  1N60 C;  1HSK A;  5G5G B;  3S1C A;  2P4P A;  3DED A;  2IPI A;  3LLB A;  1E8F A;  3I99 A;  3PQB A;  1AHU A;  1N5W C;  2VFT A;  3POP A;  2GQT A;  2Q85 A;  3S1D A;  1FFU C;  2W3S A;  2Y3R A;  3JS8 A;  1FFV C;  2VFS A;  4OAL A;  3TSH A;  5AE3 A;  2R8D A;  3KJM A;  3NVV B;  2P13 A;  2W55 A;  3NS1 B;  3TSJ A;  1W1L A;  1W1J A;  5FXD A;  1T3Q C;  1W1S A;  4HG0 A;  4BBY A;  5FXP A;  2MBR A;  2VFR A;  1W1Q A;  2W3R A;  4PVH A;  2P3H A;  2PLS A;  5I1V A;  2QKN A;  2WDW A;  3HRD C;  3D2D A;  3NRZ B;  1N61 C;  4PVE A;  3PM9 A;  2NQW A;  5D79 A;  4XLO A;  1VAO A;  4UD8 A;  3B9J B;  4PWC A;  2RK5 A;  1I19 A;  2VAO A;  2UUU A;  2UUV A;  3AN1 A;  3RJA A;  5FXE A;  2W54 A;  1N62 C;  3AMZ A;  4BCA A;  1F0X A;  1QLU A;  5HMR A;  2Y08 A;  3D2J A;  4BC7 A;  1MBT A;  3NVZ B;  2BVF A;  3NVW B;  1DZN A;  5L6F A;  1QLT A;  2OAI A;  1W1R A;  2AXR A;  1WVF A;  5ADZ A;  3FWA A;  1N5X A;  4DNS A;  1AHZ A;  1WYG A;  2YVS A;  5K8E A;  2Y4G A;  3FW7 A;  3TX1 A;  3NVY B;  1N63 C;  1FIQ B;  4MLA A;  1ZXI C;  2BVH A;  3GSY A;  2E3T A;  3AM9 A;  1UXY A;  4ML8 A;  3W8W A;  2O3G A;  5G5H B;  2VFU A;  1MBB A;  1SB3 B;  3RJ8 A;  1ZR6 A;  2Q4W A;  2VFV A;  5AWV A;  1W1O A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...