1W1SA

Plant cytokinin dehydrogenase in complex with benzylaminopurine
Total Genus 170
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
170
sequence length
495
structure length
479
Chain Sequence
ALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERLTAPRSFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structures of Michaelis and Product Complexes of Plant Cytokinin Dehydrogenase: Implications for Flavoenzyme Catalysis
pubmed doi rcsb
source organism Zea mays
molecule tags Oxidoreductase
molecule keywords CYTOKININ DEHYDROGENASE
total genus 170
structure length 479
sequence length 495
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2004-06-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 1w1sA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 1w1sA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 1w1sA03
2VFTA 2W3SA 3AMZA 1RM6B 1MBTA 2BVFA 4PVHA 1W1SA 2Q85A 1VDVA 2MBRA 3D2DA 2VFVA 4DNSA 2BVGA 3W8ZA 2R8DA 1AHVA 2QKNA 4JAYA 2O3GA 5ADZA 5AE1A 1QLTA 2YVSA 3NVVB 2VAOA 1DZNA 3BW7A 2E3TA 2P13A 1HSKA 2BVHA 2I0KA 3KJMA 2GQTA 3DQ0A 5HQXA 1FO4A 1UXYA 3TSHA 1E0YA 3SR6B 5G5GB 3S1DA 1FIQB 1W1JA 2PLIA 1AHZA 4PVJA 3NVYB 3FW9A 3C0PA 3S1EA 4EC3A 3LLBA 3FW7A 2W54A 1AHUA 5FXPA 1WVEA 3S1CA 4PWCA 3DEDA 2P4PA 4JB1A 1QLUA 3FW8A 2R2ZA 3D2HA 3AN1A 5G5HB 1N5XA 1T3QC 1JRPA 4ZOHB 3HRDC 4ML8A 1DIIA 5FXEA 2VFSA 3I99A 1WVFA 3AM9A 2W3RA 4BC7A 1FFUC 1N61C 1E8HA 1ZR6A 1VAOA 1E8FA 3LAEA 3NVZB 5HHZA 4UD8A 3W8WA 2Q4WA 1JROA 2W55A 2GQUA 3VTEA 5HMRA 1N62C 4BCAA 1W1MA 1W1QA 3W8XA 1W1OA 2VFRA 3NS1B 1MBBA 3EUB3 4XLOA 2RK5A 3S1FA 5FXDA 3NRZB 5D79A 5AE3A 1I19A 1ZXIC 5AE2A 1W1LA 2OAIA 3D2JA 1W1KA 1F0XA 1DIQA 3B9JB 3GSYA 5FXFA 2VFUA 1FFVC 2AXRA 4HG0A 3ETRB 4PWBA 2EXRA 4BC9A 1E8GA 4O95A 4BBYA 2QPMA 4OALA 3FWAA 1N60C 2PLSA 2P3HA 2NQWA 1W1RA 4PVKA 1SB3B 1N63C 3NVWB 4MLAA 1N5WC 4PYTA 3TSJA 3PM9A 1WYGA 3TX1A 4PVEA 1V97A 3JS8A 4PZFA
chains in the Genus database with same CATH superfamily
2VFTA 2W3SA 3AMZA 1RM6B 1MBTA 2BVFA 4PVHA 1W1SA 2Q85A 1VDVA 2MBRA 3D2DA 2VFVA 4DNSA 3RJ8A 2BVGA 3W8ZA 2R8DA 1AHVA 2QKNA 4JAYA 2Y08A 2O3GA 5ADZA 3EJDB 5AE1A 3EJEB 1QLTA 2YVSA 3NVVB 2VAOA 1DZNA 3BW7A 2E3TA 2P13A 1HSKA 2BVHA 5K8EA 2I0KA 3KJMA 2IPIA 2GQTA 3EJBB 3DQ0A 5HQXA 1FO4A 1UXYA 3TSHA 1E0YA 3SR6B 5G5GB 3S1DA 2Y3SA 1FIQB 1W1JA 2PLIA 1AHZA 5L6GA 4PVJA 3NVYB 3FW9A 3C0PA 3S1EA 4EC3A 3LLBA 3FW7A 2W54A 1AHUA 5FXPA 1WVEA 3S1CA 4PWCA 3DEDA 2UUVA 2P4PA 4JB1A 3HSUA 1QLUA 3FW8A 2R2ZA 3D2HA 3AN1A 5G5HB 1N5XA 1T3QC 1JRPA 4ZOHB 3HRDC 4ML8A 1DIIA 5FXEA 2VFSA 5L6FA 3I99A 1WVFA 3AM9A 2W3RA 4BC7A 1FFUC 1N61C 1E8HA 1ZR6A 5AWVA 1VAOA 1E8FA 3LAEA 3NVZB 5HHZA 4UD8A 3W8WA 2Q4WA 1JROA 2W55A 2GQUA 3VTEA 5HMRA 1N62C 2Y3RA 4BCAA 1W1MA 1W1QA 3W8XA 1W1OA 2VFRA 3NS1B 1MBBA 3EUB3 4XLOA 3POPA 2UUUA 2RK5A 3S1FA 5FXDA 3NRZB 3PQBA 5D79A 5AE3A 1I19A 1ZXIC 5AE2A 2Y4GA 1W1LA 2OAIA 3D2JA 1W1KA 1F0XA 1DIQA 3B9JB 3RJAA 3GSYA 5FXFA 2VFUA 1FFVC 2AXRA 4HG0A 3ETRB 4PWBA 2EXRA 4BC9A 2WDWA 1E8GA 4O95A 4BBYA 2QPMA 4OALA 3FWAA 1N60C 2PLSA 2P3HA 5I1VA 2NQWA 1W1RA 4PVKA 1SB3B 1N63C 3NVWB 4MLAA 1N5WC 4PYTA 3TSJA 3PM9A 1WYGA 3TX1A 5I1WA 4PVEA 1V97A 3JS8A 4PZFA
chains in the Genus database with same CATH topology
2VFTA 2W3SA 3AMZA 1RM6B 1MBTA 2BVFA 4PVHA 1W1SA 2Q85A 1VDVA 2MBRA 3D2DA 2VFVA 4DNSA 3RJ8A 2BVGA 3W8ZA 2R8DA 1AHVA 2QKNA 4JAYA 2Y08A 2O3GA 5ADZA 5AE1A 1QLTA 2YVSA 3NVVB 2VAOA 1DZNA 3BW7A 2E3TA 2P13A 1HSKA 2BVHA 5K8EA 2I0KA 3KJMA 2IPIA 2GQTA 3DQ0A 5HQXA 1FO4A 1UXYA 3TSHA 1E0YA 3SR6B 5G5GB 3S1DA 2Y3SA 1FIQB 1W1JA 2PLIA 1AHZA 5L6GA 4PVJA 3NVYB 3FW9A 3C0PA 3S1EA 4EC3A 3LLBA 3FW7A 2W54A 1AHUA 5FXPA 1WVEA 3S1CA 4PWCA 3DEDA 2UUVA 2P4PA 4JB1A 3HSUA 1QLUA 3FW8A 2R2ZA 3D2HA 3AN1A 5G5HB 1N5XA 1T3QC 1JRPA 4ZOHB 3HRDC 4ML8A 1DIIA 5FXEA 2VFSA 5L6FA 3I99A 1WVFA 3AM9A 2W3RA 4BC7A 1FFUC 1N61C 1E8HA 1ZR6A 5AWVA 1VAOA 1E8FA 3LAEA 3NVZB 5HHZA 4UD8A 3W8WA 2Q4WA 1JROA 2W55A 2GQUA 3VTEA 5HMRA 1N62C 2Y3RA 4BCAA 1W1MA 1W1QA 3W8XA 1W1OA 2VFRA 3NS1B 1MBBA 3EUB3 4XLOA 3POPA 2UUUA 2RK5A 3S1FA 5FXDA 3NRZB 3PQBA 5D79A 5AE3A 1I19A 1ZXIC 5AE2A 2Y4GA 1W1LA 2OAIA 3D2JA 1W1KA 1F0XA 1DIQA 3B9JB 3RJAA 3GSYA 5FXFA 2VFUA 1FFVC 2AXRA 4HG0A 3ETRB 4PWBA 2EXRA 4BC9A 2WDWA 1E8GA 4O95A 4BBYA 2QPMA 4OALA 3FWAA 1N60C 2PLSA 2P3HA 5I1VA 2NQWA 1W1RA 4PVKA 1SB3B 1N63C 3NVWB 4MLAA 1N5WC 4PYTA 3TSJA 3PM9A 1WYGA 3TX1A 5I1WA 4PVEA 1V97A 3JS8A 4PZFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2VFT A;  2W3S A;  3AMZ A;  1RM6 B;  1MBT A;  2BVF A;  4PVH A;  1W1S A;  2Q85 A;  1VDV A;  2MBR A;  3D2D A;  2VFV A;  4DNS A;  2BVG A;  3W8Z A;  2R8D A;  1AHV A;  2QKN A;  4JAY A;  2O3G A;  5ADZ A;  5AE1 A;  1QLT A;  2YVS A;  3NVV B;  2VAO A;  1DZN A;  3BW7 A;  2E3T A;  2P13 A;  1HSK A;  2BVH A;  2I0K A;  3KJM A;  2GQT A;  3DQ0 A;  5HQX A;  1FO4 A;  1UXY A;  3TSH A;  1E0Y A;  3SR6 B;  5G5G B;  3S1D A;  1FIQ B;  1W1J A;  2PLI A;  1AHZ A;  4PVJ A;  3NVY B;  3FW9 A;  3C0P A;  3S1E A;  4EC3 A;  3LLB A;  3FW7 A;  2W54 A;  1AHU A;  5FXP A;  1WVE A;  3S1C A;  4PWC A;  3DED A;  2P4P A;  4JB1 A;  1QLU A;  3FW8 A;  2R2Z A;  3D2H A;  3AN1 A;  5G5H B;  1N5X A;  1T3Q C;  1JRP A;  4ZOH B;  3HRD C;  4ML8 A;  1DII A;  5FXE A;  2VFS A;  3I99 A;  1WVF A;  3AM9 A;  2W3R A;  4BC7 A;  1FFU C;  1N61 C;  1E8H A;  1ZR6 A;  1VAO A;  1E8F A;  3LAE A;  3NVZ B;  5HHZ A;  4UD8 A;  3W8W A;  2Q4W A;  1JRO A;  2W55 A;  2GQU A;  3VTE A;  5HMR A;  1N62 C;  4BCA A;  1W1M A;  1W1Q A;  3W8X A;  1W1O A;  2VFR A;  3NS1 B;  1MBB A;  3EUB 3;  4XLO A;  2RK5 A;  3S1F A;  5FXD A;  3NRZ B;  5D79 A;  5AE3 A;  1I19 A;  1ZXI C;  5AE2 A;  1W1L A;  2OAI A;  3D2J A;  1W1K A;  1F0X A;  1DIQ A;  3B9J B;  3GSY A;  5FXF A;  2VFU A;  1FFV C;  2AXR A;  4HG0 A;  3ETR B;  4PWB A;  2EXR A;  4BC9 A;  1E8G A;  4O95 A;  4BBY A;  2QPM A;  4OAL A;  3FWA A;  1N60 C;  2PLS A;  2P3H A;  2NQW A;  1W1R A;  4PVK A;  1SB3 B;  1N63 C;  3NVW B;  4MLA A;  1N5W C;  4PYT A;  3TSJ A;  3PM9 A;  1WYG A;  3TX1 A;  4PVE A;  1V97 A;  3JS8 A;  4PZF A; 
#chains in the Genus database with same CATH topology
 2VFT A;  2W3S A;  3AMZ A;  1RM6 B;  1MBT A;  2BVF A;  4PVH A;  1W1S A;  2Q85 A;  1VDV A;  2MBR A;  3D2D A;  2VFV A;  4DNS A;  3RJ8 A;  2BVG A;  3W8Z A;  2R8D A;  1AHV A;  2QKN A;  4JAY A;  2Y08 A;  2O3G A;  5ADZ A;  3EJD B;  5AE1 A;  3EJE B;  1QLT A;  2YVS A;  3NVV B;  2VAO A;  1DZN A;  3BW7 A;  2E3T A;  2P13 A;  1HSK A;  2BVH A;  5K8E A;  2I0K A;  3KJM A;  2IPI A;  2GQT A;  3EJB B;  3DQ0 A;  5HQX A;  1FO4 A;  1UXY A;  3TSH A;  1E0Y A;  3SR6 B;  5G5G B;  3S1D A;  2Y3S A;  1FIQ B;  1W1J A;  2PLI A;  1AHZ A;  5L6G A;  4PVJ A;  3NVY B;  3FW9 A;  3C0P A;  3S1E A;  4EC3 A;  3LLB A;  3FW7 A;  2W54 A;  1AHU A;  5FXP A;  1WVE A;  3S1C A;  4PWC A;  3DED A;  2UUV A;  2P4P A;  4JB1 A;  3HSU A;  1QLU A;  3FW8 A;  2R2Z A;  3D2H A;  3AN1 A;  5G5H B;  1N5X A;  1T3Q C;  1JRP A;  4ZOH B;  3HRD C;  4ML8 A;  1DII A;  5FXE A;  2VFS A;  5L6F A;  3I99 A;  1WVF A;  3AM9 A;  2W3R A;  4BC7 A;  1FFU C;  1N61 C;  1E8H A;  1ZR6 A;  5AWV A;  1VAO A;  1E8F A;  3LAE A;  3NVZ B;  5HHZ A;  4UD8 A;  3W8W A;  2Q4W A;  1JRO A;  2W55 A;  2GQU A;  3VTE A;  5HMR A;  1N62 C;  2Y3R A;  4BCA A;  1W1M A;  1W1Q A;  3W8X A;  1W1O A;  2VFR A;  3NS1 B;  1MBB A;  3EUB 3;  4XLO A;  3POP A;  2UUU A;  2RK5 A;  3S1F A;  5FXD A;  3NRZ B;  3PQB A;  5D79 A;  5AE3 A;  1I19 A;  1ZXI C;  5AE2 A;  2Y4G A;  1W1L A;  2OAI A;  3D2J A;  1W1K A;  1F0X A;  1DIQ A;  3B9J B;  3RJA A;  3GSY A;  5FXF A;  2VFU A;  1FFV C;  2AXR A;  4HG0 A;  3ETR B;  4PWB A;  2EXR A;  4BC9 A;  2WDW A;  1E8G A;  4O95 A;  4BBY A;  2QPM A;  4OAL A;  3FWA A;  1N60 C;  2PLS A;  2P3H A;  5I1V A;  2NQW A;  1W1R A;  4PVK A;  1SB3 B;  1N63 C;  3NVW B;  4MLA A;  1N5W C;  4PYT A;  3TSJ A;  3PM9 A;  1WYG A;  3TX1 A;  5I1W A;  4PVE A;  1V97 A;  3JS8 A;  4PZF A; 
#chains in the Genus database with same CATH homology
 2VFT A;  2W3S A;  3AMZ A;  1RM6 B;  1MBT A;  2BVF A;  4PVH A;  1W1S A;  2Q85 A;  1VDV A;  2MBR A;  3D2D A;  2VFV A;  4DNS A;  3RJ8 A;  2BVG A;  3W8Z A;  2R8D A;  1AHV A;  2QKN A;  4JAY A;  2Y08 A;  2O3G A;  5ADZ A;  5AE1 A;  1QLT A;  2YVS A;  3NVV B;  2VAO A;  1DZN A;  3BW7 A;  2E3T A;  2P13 A;  1HSK A;  2BVH A;  5K8E A;  2I0K A;  3KJM A;  2IPI A;  2GQT A;  3DQ0 A;  5HQX A;  1FO4 A;  1UXY A;  3TSH A;  1E0Y A;  3SR6 B;  5G5G B;  3S1D A;  2Y3S A;  1FIQ B;  1W1J A;  2PLI A;  1AHZ A;  5L6G A;  4PVJ A;  3NVY B;  3FW9 A;  3C0P A;  3S1E A;  4EC3 A;  3LLB A;  3FW7 A;  2W54 A;  1AHU A;  5FXP A;  1WVE A;  3S1C A;  4PWC A;  3DED A;  2UUV A;  2P4P A;  4JB1 A;  3HSU A;  1QLU A;  3FW8 A;  2R2Z A;  3D2H A;  3AN1 A;  5G5H B;  1N5X A;  1T3Q C;  1JRP A;  4ZOH B;  3HRD C;  4ML8 A;  1DII A;  5FXE A;  2VFS A;  5L6F A;  3I99 A;  1WVF A;  3AM9 A;  2W3R A;  4BC7 A;  1FFU C;  1N61 C;  1E8H A;  1ZR6 A;  5AWV A;  1VAO A;  1E8F A;  3LAE A;  3NVZ B;  5HHZ A;  4UD8 A;  3W8W A;  2Q4W A;  1JRO A;  2W55 A;  2GQU A;  3VTE A;  5HMR A;  1N62 C;  2Y3R A;  4BCA A;  1W1M A;  1W1Q A;  3W8X A;  1W1O A;  2VFR A;  3NS1 B;  1MBB A;  3EUB 3;  4XLO A;  3POP A;  2UUU A;  2RK5 A;  3S1F A;  5FXD A;  3NRZ B;  3PQB A;  5D79 A;  5AE3 A;  1I19 A;  1ZXI C;  5AE2 A;  2Y4G A;  1W1L A;  2OAI A;  3D2J A;  1W1K A;  1F0X A;  1DIQ A;  3B9J B;  3RJA A;  3GSY A;  5FXF A;  2VFU A;  1FFV C;  2AXR A;  4HG0 A;  3ETR B;  4PWB A;  2EXR A;  4BC9 A;  2WDW A;  1E8G A;  4O95 A;  4BBY A;  2QPM A;  4OAL A;  3FWA A;  1N60 C;  2PLS A;  2P3H A;  5I1V A;  2NQW A;  1W1R A;  4PVK A;  1SB3 B;  1N63 C;  3NVW B;  4MLA A;  1N5W C;  4PYT A;  3TSJ A;  3PM9 A;  1WYG A;  3TX1 A;  5I1W A;  4PVE A;  1V97 A;  3JS8 A;  4PZF A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...