1W1SA

Plant cytokinin dehydrogenase in complex with benzylaminopurine
Total Genus 170
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
170
sequence length
495
structure length
479
Chain Sequence
ALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERLTAPRSFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords CYTOKININ DEHYDROGENASE
publication title Structures of Michaelis and Product Complexes of Plant Cytokinin Dehydrogenase: Implications for Flavoenzyme Catalysis
pubmed doi rcsb
source organism Zea mays
total genus 170
structure length 479
sequence length 495
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2004-06-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 1w1sA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 1w1sA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 1w1sA03
3ETRB 3S1EA 3FW8A 4ML8A 2W3SA 3TX1A 2BVFA 2MBRA 4EC3A 1VAOA 1W1MA 3B9JB 5ADZA 3S1CA 2P4PA 4BBYA 4PVKA 1MBBA 2GQUA 2VFVA 1N5WC 3BW7A 3D2JA 1SB3B 2OAIA 3NRZB 3TSJA 2VFTA 3W8XA 3AN1A 5HMRA 2P3HA 1QLUA 1RM6B 1E8HA 3NVYB 4PVJA 3AMZA 1E8GA 4BCAA 5G5GB 4PWCA 3JS8A 1FIQB 2BVGA 1N62C 2W54A 2GQTA 1W1KA 4HG0A 3D2DA 3PM9A 4XLOA 3DQ0A 2RK5A 2VAOA 1N5XA 5AE3A 1AHZA 4BC7A 1WVFA 4PYTA 3HRDC 2QPMA 3DEDA 3S1DA 3S1FA 4JAYA 4ZOHB 5FXFA 4PVHA 2W3RA 1W1OA 1N63C 3C0PA 2W55A 2P13A 1W1JA 1ZXIC 3FWAA 1W1RA 3FW9A 1FFVC 3I99A 3W8WA 2NQWA 1HSKA 1N61C 2VFUA 5HQXA 1W1QA 2EXRA 4OALA 4PVEA 2QKNA 4PZFA 2E3TA 3GSYA 3W8ZA 1V97A 3VTEA 3EUB3 3NS1B 4UD8A 1T3QC 4JB1A 1DIIA 3KJMA 5FXEA 3NVZB 1DZNA 1ZR6A 2PLSA 2R8DA 1JRPA 1MBTA 1DIQA 1N60C 1F0XA 1AHUA 2Q4WA 3TSHA 3FW7A 3LLBA 2PLIA 1I19A 1JROA 5AE1A 2R2ZA 4BC9A 1WVEA 1E0YA 5D79A 5HHZA 1VDVA 3LAEA 2AXRA 1W1SA 2I0KA 1UXYA 3SR6B 2BVHA 1AHVA 3D2HA 4DNSA 1WYGA 1W1LA 2Q85A 2O3GA 3NVVB 4PWBA 1FFUC 3NVWB 3AM9A 4MLAA 2YVSA 5FXPA 5AE2A 1QLTA 5G5HB 2VFRA 1FO4A 5FXDA 1E8FA 4O95A 2VFSA
chains in the Genus database with same CATH superfamily
3ETRB 5AWVA 3S1EA 3FW8A 4ML8A 2WDWA 2W3SA 3EJBB 3TX1A 3RJ8A 2BVFA 3RJAA 2MBRA 4EC3A 5I1VA 1VAOA 1W1MA 3B9JB 5ADZA 3S1CA 2Y4GA 2P4PA 4BBYA 4PVKA 1MBBA 5K8EA 5I1WA 2GQUA 2VFVA 1N5WC 3BW7A 3D2JA 1SB3B 2OAIA 3NRZB 3TSJA 2VFTA 3W8XA 2Y08A 3AN1A 5L6GA 5HMRA 2P3HA 1QLUA 1RM6B 1E8HA 3NVYB 2IPIA 4PVJA 3AMZA 1E8GA 4BCAA 5G5GB 4PWCA 3JS8A 1FIQB 2BVGA 1N62C 2W54A 2GQTA 1W1KA 4HG0A 3D2DA 3PM9A 4XLOA 3DQ0A 2RK5A 2VAOA 1N5XA 5AE3A 1AHZA 4BC7A 1WVFA 4PYTA 3HRDC 3POPA 2QPMA 3DEDA 3S1DA 3S1FA 4JAYA 4ZOHB 5FXFA 4PVHA 3HSUA 2W3RA 1W1OA 1N63C 3C0PA 2W55A 2P13A 1W1JA 2Y3RA 1ZXIC 3FWAA 1W1RA 3FW9A 1FFVC 3I99A 3W8WA 2NQWA 3EJDB 1HSKA 1N61C 2VFUA 5HQXA 1W1QA 2EXRA 4OALA 4PVEA 2QKNA 4PZFA 2E3TA 3GSYA 3W8ZA 1V97A 3VTEA 3EUB3 3NS1B 4UD8A 1T3QC 4JB1A 1DIIA 3KJMA 5FXEA 3NVZB 2Y3SA 1DZNA 1ZR6A 2PLSA 2R8DA 2UUUA 1JRPA 2UUVA 1MBTA 1DIQA 1N60C 1F0XA 1AHUA 2Q4WA 3TSHA 3FW7A 3LLBA 3PQBA 3EJEB 2PLIA 1I19A 1JROA 5AE1A 2R2ZA 4BC9A 1WVEA 1E0YA 5D79A 5L6FA 5HHZA 1VDVA 3LAEA 2AXRA 1W1SA 2I0KA 1UXYA 3SR6B 2BVHA 1AHVA 3D2HA 3NVVB 1WYGA 1W1LA 2Q85A 4DNSA 2O3GA 4PWBA 1FFUC 3NVWB 3AM9A 4MLAA 2YVSA 5FXPA 5AE2A 1QLTA 5G5HB 2VFRA 1FO4A 5FXDA 1E8FA 4O95A 2VFSA
chains in the Genus database with same CATH topology
3ETRB 5AWVA 3S1EA 3FW8A 4ML8A 2WDWA 2W3SA 3TX1A 3RJ8A 2BVFA 3RJAA 2MBRA 4EC3A 5I1VA 1VAOA 1W1MA 3B9JB 5ADZA 3S1CA 2Y4GA 2P4PA 4BBYA 4PVKA 1MBBA 5K8EA 5I1WA 2GQUA 2VFVA 1N5WC 3BW7A 3D2JA 1SB3B 2OAIA 3NRZB 3TSJA 2VFTA 3W8XA 2Y08A 3AN1A 5L6GA 5HMRA 2P3HA 1QLUA 1RM6B 1E8HA 2IPIA 3NVYB 4PVJA 3AMZA 1E8GA 4BCAA 5G5GB 4PWCA 3JS8A 1FIQB 2BVGA 1N62C 2W54A 2GQTA 1W1KA 4HG0A 3D2DA 3PM9A 4XLOA 3DQ0A 2RK5A 2VAOA 1N5XA 5AE3A 1AHZA 4BC7A 1WVFA 4PYTA 3HRDC 3POPA 2QPMA 3DEDA 3S1DA 3S1FA 4JAYA 4ZOHB 5FXFA 4PVHA 3HSUA 2W3RA 1W1OA 1N63C 3C0PA 2W55A 2P13A 1W1JA 2Y3RA 1ZXIC 3FWAA 1W1RA 3FW9A 1FFVC 3I99A 3W8WA 2NQWA 1HSKA 1N61C 2VFUA 5HQXA 1W1QA 2EXRA 4OALA 4PVEA 2QKNA 4PZFA 2E3TA 3GSYA 3W8ZA 1V97A 3VTEA 3EUB3 3NS1B 4UD8A 1T3QC 4JB1A 1DIIA 3KJMA 5FXEA 3NVZB 2Y3SA 1DZNA 1ZR6A 2PLSA 2R8DA 2UUUA 1JRPA 2UUVA 1MBTA 1DIQA 1N60C 1F0XA 1AHUA 2Q4WA 3TSHA 3FW7A 3LLBA 3PQBA 2PLIA 1I19A 1JROA 5AE1A 2R2ZA 4BC9A 1WVEA 1E0YA 5D79A 5L6FA 5HHZA 1VDVA 3LAEA 2AXRA 1W1SA 2I0KA 1UXYA 3SR6B 2BVHA 1AHVA 3D2HA 4DNSA 1WYGA 1W1LA 2Q85A 2O3GA 3NVVB 4PWBA 1FFUC 3NVWB 3AM9A 4MLAA 2YVSA 5FXPA 5AE2A 1QLTA 5G5HB 2VFRA 1FO4A 5FXDA 1E8FA 4O95A 2VFSA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3ETR B;  3S1E A;  3FW8 A;  4ML8 A;  2W3S A;  3TX1 A;  2BVF A;  2MBR A;  4EC3 A;  1VAO A;  1W1M A;  3B9J B;  5ADZ A;  3S1C A;  2P4P A;  4BBY A;  4PVK A;  1MBB A;  2GQU A;  2VFV A;  1N5W C;  3BW7 A;  3D2J A;  1SB3 B;  2OAI A;  3NRZ B;  3TSJ A;  2VFT A;  3W8X A;  3AN1 A;  5HMR A;  2P3H A;  1QLU A;  1RM6 B;  1E8H A;  3NVY B;  4PVJ A;  3AMZ A;  1E8G A;  4BCA A;  5G5G B;  4PWC A;  3JS8 A;  1FIQ B;  2BVG A;  1N62 C;  2W54 A;  2GQT A;  1W1K A;  4HG0 A;  3D2D A;  3PM9 A;  4XLO A;  3DQ0 A;  2RK5 A;  2VAO A;  1N5X A;  5AE3 A;  1AHZ A;  4BC7 A;  1WVF A;  4PYT A;  3HRD C;  2QPM A;  3DED A;  3S1D A;  3S1F A;  4JAY A;  4ZOH B;  5FXF A;  4PVH A;  2W3R A;  1W1O A;  1N63 C;  3C0P A;  2W55 A;  2P13 A;  1W1J A;  1ZXI C;  3FWA A;  1W1R A;  3FW9 A;  1FFV C;  3I99 A;  3W8W A;  2NQW A;  1HSK A;  1N61 C;  2VFU A;  5HQX A;  1W1Q A;  2EXR A;  4OAL A;  4PVE A;  2QKN A;  4PZF A;  2E3T A;  3GSY A;  3W8Z A;  1V97 A;  3VTE A;  3EUB 3;  3NS1 B;  4UD8 A;  1T3Q C;  4JB1 A;  1DII A;  3KJM A;  5FXE A;  3NVZ B;  1DZN A;  1ZR6 A;  2PLS A;  2R8D A;  1JRP A;  1MBT A;  1DIQ A;  1N60 C;  1F0X A;  1AHU A;  2Q4W A;  3TSH A;  3FW7 A;  3LLB A;  2PLI A;  1I19 A;  1JRO A;  5AE1 A;  2R2Z A;  4BC9 A;  1WVE A;  1E0Y A;  5D79 A;  5HHZ A;  1VDV A;  3LAE A;  2AXR A;  1W1S A;  2I0K A;  1UXY A;  3SR6 B;  2BVH A;  1AHV A;  3D2H A;  4DNS A;  1WYG A;  1W1L A;  2Q85 A;  2O3G A;  3NVV B;  4PWB A;  1FFU C;  3NVW B;  3AM9 A;  4MLA A;  2YVS A;  5FXP A;  5AE2 A;  1QLT A;  5G5H B;  2VFR A;  1FO4 A;  5FXD A;  1E8F A;  4O95 A;  2VFS A; 
#chains in the Genus database with same CATH topology
 3ETR B;  5AWV A;  3S1E A;  3FW8 A;  4ML8 A;  2WDW A;  2W3S A;  3EJB B;  3TX1 A;  3RJ8 A;  2BVF A;  3RJA A;  2MBR A;  4EC3 A;  5I1V A;  1VAO A;  1W1M A;  3B9J B;  5ADZ A;  3S1C A;  2Y4G A;  2P4P A;  4BBY A;  4PVK A;  1MBB A;  5K8E A;  5I1W A;  2GQU A;  2VFV A;  1N5W C;  3BW7 A;  3D2J A;  1SB3 B;  2OAI A;  3NRZ B;  3TSJ A;  2VFT A;  3W8X A;  2Y08 A;  3AN1 A;  5L6G A;  5HMR A;  2P3H A;  1QLU A;  1RM6 B;  1E8H A;  3NVY B;  2IPI A;  4PVJ A;  3AMZ A;  1E8G A;  4BCA A;  5G5G B;  4PWC A;  3JS8 A;  1FIQ B;  2BVG A;  1N62 C;  2W54 A;  2GQT A;  1W1K A;  4HG0 A;  3D2D A;  3PM9 A;  4XLO A;  3DQ0 A;  2RK5 A;  2VAO A;  1N5X A;  5AE3 A;  1AHZ A;  4BC7 A;  1WVF A;  4PYT A;  3HRD C;  3POP A;  2QPM A;  3DED A;  3S1D A;  3S1F A;  4JAY A;  4ZOH B;  5FXF A;  4PVH A;  3HSU A;  2W3R A;  1W1O A;  1N63 C;  3C0P A;  2W55 A;  2P13 A;  1W1J A;  2Y3R A;  1ZXI C;  3FWA A;  1W1R A;  3FW9 A;  1FFV C;  3I99 A;  3W8W A;  2NQW A;  3EJD B;  1HSK A;  1N61 C;  2VFU A;  5HQX A;  1W1Q A;  2EXR A;  4OAL A;  4PVE A;  2QKN A;  4PZF A;  2E3T A;  3GSY A;  3W8Z A;  1V97 A;  3VTE A;  3EUB 3;  3NS1 B;  4UD8 A;  1T3Q C;  4JB1 A;  1DII A;  3KJM A;  5FXE A;  3NVZ B;  2Y3S A;  1DZN A;  1ZR6 A;  2PLS A;  2R8D A;  2UUU A;  1JRP A;  2UUV A;  1MBT A;  1DIQ A;  1N60 C;  1F0X A;  1AHU A;  2Q4W A;  3TSH A;  3FW7 A;  3LLB A;  3PQB A;  3EJE B;  2PLI A;  1I19 A;  1JRO A;  5AE1 A;  2R2Z A;  4BC9 A;  1WVE A;  1E0Y A;  5D79 A;  5L6F A;  5HHZ A;  1VDV A;  3LAE A;  2AXR A;  1W1S A;  2I0K A;  1UXY A;  3SR6 B;  2BVH A;  1AHV A;  3D2H A;  3NVV B;  1WYG A;  1W1L A;  2Q85 A;  4DNS A;  2O3G A;  4PWB A;  1FFU C;  3NVW B;  3AM9 A;  4MLA A;  2YVS A;  5FXP A;  5AE2 A;  1QLT A;  5G5H B;  2VFR A;  1FO4 A;  5FXD A;  1E8F A;  4O95 A;  2VFS A; 
#chains in the Genus database with same CATH homology
 3ETR B;  5AWV A;  3S1E A;  3FW8 A;  4ML8 A;  2WDW A;  2W3S A;  3TX1 A;  3RJ8 A;  2BVF A;  3RJA A;  2MBR A;  4EC3 A;  5I1V A;  1VAO A;  1W1M A;  3B9J B;  5ADZ A;  3S1C A;  2Y4G A;  2P4P A;  4BBY A;  4PVK A;  1MBB A;  5K8E A;  5I1W A;  2GQU A;  2VFV A;  1N5W C;  3BW7 A;  3D2J A;  1SB3 B;  2OAI A;  3NRZ B;  3TSJ A;  2VFT A;  3W8X A;  2Y08 A;  3AN1 A;  5L6G A;  5HMR A;  2P3H A;  1QLU A;  1RM6 B;  1E8H A;  2IPI A;  3NVY B;  4PVJ A;  3AMZ A;  1E8G A;  4BCA A;  5G5G B;  4PWC A;  3JS8 A;  1FIQ B;  2BVG A;  1N62 C;  2W54 A;  2GQT A;  1W1K A;  4HG0 A;  3D2D A;  3PM9 A;  4XLO A;  3DQ0 A;  2RK5 A;  2VAO A;  1N5X A;  5AE3 A;  1AHZ A;  4BC7 A;  1WVF A;  4PYT A;  3HRD C;  3POP A;  2QPM A;  3DED A;  3S1D A;  3S1F A;  4JAY A;  4ZOH B;  5FXF A;  4PVH A;  3HSU A;  2W3R A;  1W1O A;  1N63 C;  3C0P A;  2W55 A;  2P13 A;  1W1J A;  2Y3R A;  1ZXI C;  3FWA A;  1W1R A;  3FW9 A;  1FFV C;  3I99 A;  3W8W A;  2NQW A;  1HSK A;  1N61 C;  2VFU A;  5HQX A;  1W1Q A;  2EXR A;  4OAL A;  4PVE A;  2QKN A;  4PZF A;  2E3T A;  3GSY A;  3W8Z A;  1V97 A;  3VTE A;  3EUB 3;  3NS1 B;  4UD8 A;  1T3Q C;  4JB1 A;  1DII A;  3KJM A;  5FXE A;  3NVZ B;  2Y3S A;  1DZN A;  1ZR6 A;  2PLS A;  2R8D A;  2UUU A;  1JRP A;  2UUV A;  1MBT A;  1DIQ A;  1N60 C;  1F0X A;  1AHU A;  2Q4W A;  3TSH A;  3FW7 A;  3LLB A;  3PQB A;  2PLI A;  1I19 A;  1JRO A;  5AE1 A;  2R2Z A;  4BC9 A;  1WVE A;  1E0Y A;  5D79 A;  5L6F A;  5HHZ A;  1VDV A;  3LAE A;  2AXR A;  1W1S A;  2I0K A;  1UXY A;  3SR6 B;  2BVH A;  1AHV A;  3D2H A;  4DNS A;  1WYG A;  1W1L A;  2Q85 A;  2O3G A;  3NVV B;  4PWB A;  1FFU C;  3NVW B;  3AM9 A;  4MLA A;  2YVS A;  5FXP A;  5AE2 A;  1QLT A;  5G5H B;  2VFR A;  1FO4 A;  5FXD A;  1E8F A;  4O95 A;  2VFS A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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