1W1SA

Plant cytokinin dehydrogenase in complex with benzylaminopurine
Total Genus 170
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
170
sequence length
495
structure length
479
Chain Sequence
b'ALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERLTAPRSFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords CYTOKININ DEHYDROGENASE
publication title Structures of Michaelis and Product Complexes of Plant Cytokinin Dehydrogenase: Implications for Flavoenzyme Catalysis
pubmed doi rcsb
source organism Zea mays
molecule tags Oxidoreductase
total genus 170
structure length 479
sequence length 495
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2004-06-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 1w1sA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 1w1sA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 1w1sA03
1N5WC 3DEDA 2OAIA 3D2HA 1ZXIC 2I0KA 2E3TA 2R8DA 2MBRA 5FXFA 4DNSA 1T3QC 5G5HB 4HG0A 4ZOHB 1SB3B 5D79A 3W8WA 5HQXA 4PVKA 1VAOA 2PLIA 3TSHA 4PVHA 2GQTA 4JB1A 1W1JA 1DZNA 1WVFA 1W1LA 2P3HA 3NVYB 2VAOA 3I99A 4O95A 3NRZB 1RM6B 5FXEA 3JS8A 4OALA 1AHVA 5FXDA 2VFSA 1E8HA 2P13A 3LLBA 2VFVA 3BW7A 4JAYA 3VTEA 4PWBA 2AXRA 3S1FA 1W1RA 2RK5A 3B9JB 4BBYA 3NVVB 3C0PA 1FO4A 2W55A 2VFRA 3LAEA 1AHUA 1FFVC 1HSKA 1N5XA 4PYTA 4UD8A 4XLOA 1I19A 1MBTA 4PWCA 1DIQA 2VFTA 3W8XA 1W1OA 1WVEA 3S1CA 4BC7A 1W1KA 3NVZB 2Q85A 3TSJA 3ETRB 5HMRA 2BVFA 2W3SA 3KJMA 1V97A 4MLAA 3SR6B 3TX1A 5AE1A 1FIQB 3HRDC 3PM9A 1QLTA 4PVEA 1N63C 2O3GA 2BVGA 3GSYA 3FW8A 1W1MA 1UXYA 2PLSA 1DIIA 1W1SA 3AM9A 1FFUC 1N60C 3FWAA 3AMZA 4EC3A 3D2JA 1JRPA 1AHZA 3AN1A 4PVJA 3EUB3 1MBBA 2R2ZA 2BVHA 1E8FA 1E8GA 1QLUA 2QKNA 4BCAA 1N61C 2NQWA 1N62C 5G5GB 2QPMA 1ZR6A 3D2DA 1E0YA 2W3RA 3W8ZA 2EXRA 3FW9A 1VDVA 3S1DA 5AE3A 1F0XA 2Q4WA 5AE2A 3DQ0A 4ML8A 1WYGA 5FXPA 1W1QA 2VFUA 2W54A 3NVWB 2GQUA 5ADZA 3FW7A 4PZFA 2P4PA 2YVSA 3S1EA 4BC9A 1JROA 5HHZA 3NS1B
chains in the Genus database with same CATH superfamily
1N5WC 3DEDA 2OAIA 3D2HA 1ZXIC 2Y3RA 2I0KA 2E3TA 2R8DA 2MBRA 5FXFA 3HSUA 4DNSA 1T3QC 5G5HB 4HG0A 4ZOHB 1SB3B 5D79A 3W8WA 2WDWA 5L6FA 5HQXA 4PVKA 1VAOA 2PLIA 5AWVA 3TSHA 4PVHA 2GQTA 4JB1A 1W1JA 1DZNA 1WVFA 1W1LA 2P3HA 3NVYB 3EJBB 2VAOA 3I99A 4O95A 3POPA 3NRZB 3RJAA 3EJDB 1RM6B 5FXEA 3JS8A 4OALA 1AHVA 5FXDA 2VFSA 1E8HA 2P13A 3LLBA 2VFVA 3BW7A 4JAYA 3VTEA 4PWBA 2AXRA 3S1FA 1W1RA 2RK5A 3RJ8A 3B9JB 4BBYA 3NVVB 3C0PA 1FO4A 5K8EA 2W55A 2VFRA 3LAEA 1AHUA 1FFVC 1HSKA 1N5XA 4PYTA 4UD8A 4XLOA 1I19A 1MBTA 2IPIA 3EJEB 4PWCA 1DIQA 2VFTA 3W8XA 1W1OA 1WVEA 3S1CA 4BC7A 2Y3SA 1W1KA 3NVZB 2Q85A 3TSJA 3ETRB 5HMRA 2BVFA 2W3SA 3KJMA 1V97A 4MLAA 3SR6B 3TX1A 2UUUA 5AE1A 1FIQB 5L6GA 3HRDC 3PM9A 1QLTA 4PVEA 1N63C 2O3GA 2BVGA 3GSYA 3FW8A 1W1MA 1UXYA 2PLSA 1DIIA 1W1SA 3AM9A 1FFUC 1N60C 3FWAA 3PQBA 3AMZA 4EC3A 3D2JA 1JRPA 1AHZA 3AN1A 4PVJA 3EUB3 1MBBA 2R2ZA 2BVHA 1E8FA 1E8GA 1QLUA 2QKNA 4BCAA 1N61C 2NQWA 2UUVA 1N62C 5G5GB 5I1WA 2QPMA 1ZR6A 3D2DA 2Y08A 1E0YA 2W3RA 3W8ZA 5I1VA 2EXRA 3FW9A 1VDVA 3S1DA 5AE3A 1F0XA 2Q4WA 5AE2A 3DQ0A 4ML8A 1WYGA 5FXPA 1W1QA 2VFUA 2W54A 3NVWB 2GQUA 5ADZA 3FW7A 4PZFA 2P4PA 2YVSA 3S1EA 4BC9A 1JROA 5HHZA 3NS1B 2Y4GA
chains in the Genus database with same CATH topology
1N5WC 3DEDA 2OAIA 3D2HA 1ZXIC 2Y3RA 2I0KA 2E3TA 2R8DA 2MBRA 5FXFA 3HSUA 4DNSA 1T3QC 5G5HB 4HG0A 4ZOHB 1SB3B 5D79A 3W8WA 2WDWA 5L6FA 5HQXA 4PVKA 1VAOA 2PLIA 5AWVA 3TSHA 4PVHA 2GQTA 4JB1A 1W1JA 1DZNA 1WVFA 1W1LA 2P3HA 3NVYB 2VAOA 3I99A 4O95A 3POPA 3NRZB 3RJAA 1RM6B 5FXEA 3JS8A 4OALA 1AHVA 5FXDA 2VFSA 1E8HA 2P13A 3LLBA 2VFVA 3BW7A 4JAYA 3VTEA 4PWBA 2AXRA 3S1FA 1W1RA 2RK5A 3RJ8A 3B9JB 4BBYA 3NVVB 3C0PA 1FO4A 5K8EA 2W55A 2VFRA 3LAEA 1AHUA 1FFVC 1HSKA 1N5XA 4PYTA 4UD8A 4XLOA 1I19A 1MBTA 2IPIA 4PWCA 1DIQA 2VFTA 3W8XA 1W1OA 1WVEA 3S1CA 4BC7A 2Y3SA 1W1KA 3NVZB 2Q85A 3TSJA 3ETRB 5HMRA 2BVFA 2W3SA 3KJMA 1V97A 4MLAA 3SR6B 3TX1A 2UUUA 5AE1A 1FIQB 5L6GA 3HRDC 3PM9A 1QLTA 4PVEA 1N63C 2O3GA 2BVGA 3GSYA 3FW8A 1W1MA 1UXYA 2PLSA 1DIIA 1W1SA 3AM9A 1FFUC 1N60C 3FWAA 3PQBA 3AMZA 4EC3A 3D2JA 1JRPA 1AHZA 3AN1A 4PVJA 3EUB3 1MBBA 2R2ZA 2BVHA 1E8FA 1E8GA 1QLUA 2QKNA 4BCAA 1N61C 2NQWA 2UUVA 1N62C 5G5GB 5I1WA 2QPMA 1ZR6A 3D2DA 2Y08A 1E0YA 2W3RA 3W8ZA 5I1VA 2EXRA 3FW9A 1VDVA 3S1DA 5AE3A 1F0XA 2Q4WA 5AE2A 3DQ0A 4ML8A 1WYGA 5FXPA 1W1QA 2VFUA 2W54A 3NVWB 2GQUA 5ADZA 3FW7A 4PZFA 2P4PA 2YVSA 3S1EA 4BC9A 1JROA 5HHZA 3NS1B 2Y4GA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1N5W C;  3DED A;  2OAI A;  3D2H A;  1ZXI C;  2I0K A;  2E3T A;  2R8D A;  2MBR A;  5FXF A;  4DNS A;  1T3Q C;  5G5H B;  4HG0 A;  4ZOH B;  1SB3 B;  5D79 A;  3W8W A;  5HQX A;  4PVK A;  1VAO A;  2PLI A;  3TSH A;  4PVH A;  2GQT A;  4JB1 A;  1W1J A;  1DZN A;  1WVF A;  1W1L A;  2P3H A;  3NVY B;  2VAO A;  3I99 A;  4O95 A;  3NRZ B;  1RM6 B;  5FXE A;  3JS8 A;  4OAL A;  1AHV A;  5FXD A;  2VFS A;  1E8H A;  2P13 A;  3LLB A;  2VFV A;  3BW7 A;  4JAY A;  3VTE A;  4PWB A;  2AXR A;  3S1F A;  1W1R A;  2RK5 A;  3B9J B;  4BBY A;  3NVV B;  3C0P A;  1FO4 A;  2W55 A;  2VFR A;  3LAE A;  1AHU A;  1FFV C;  1HSK A;  1N5X A;  4PYT A;  4UD8 A;  4XLO A;  1I19 A;  1MBT A;  4PWC A;  1DIQ A;  2VFT A;  3W8X A;  1W1O A;  1WVE A;  3S1C A;  4BC7 A;  1W1K A;  3NVZ B;  2Q85 A;  3TSJ A;  3ETR B;  5HMR A;  2BVF A;  2W3S A;  3KJM A;  1V97 A;  4MLA A;  3SR6 B;  3TX1 A;  5AE1 A;  1FIQ B;  3HRD C;  3PM9 A;  1QLT A;  4PVE A;  1N63 C;  2O3G A;  2BVG A;  3GSY A;  3FW8 A;  1W1M A;  1UXY A;  2PLS A;  1DII A;  1W1S A;  3AM9 A;  1FFU C;  1N60 C;  3FWA A;  3AMZ A;  4EC3 A;  3D2J A;  1JRP A;  1AHZ A;  3AN1 A;  4PVJ A;  3EUB 3;  1MBB A;  2R2Z A;  2BVH A;  1E8F A;  1E8G A;  1QLU A;  2QKN A;  4BCA A;  1N61 C;  2NQW A;  1N62 C;  5G5G B;  2QPM A;  1ZR6 A;  3D2D A;  1E0Y A;  2W3R A;  3W8Z A;  2EXR A;  3FW9 A;  1VDV A;  3S1D A;  5AE3 A;  1F0X A;  2Q4W A;  5AE2 A;  3DQ0 A;  4ML8 A;  1WYG A;  5FXP A;  1W1Q A;  2VFU A;  2W54 A;  3NVW B;  2GQU A;  5ADZ A;  3FW7 A;  4PZF A;  2P4P A;  2YVS A;  3S1E A;  4BC9 A;  1JRO A;  5HHZ A;  3NS1 B; 
#chains in the Genus database with same CATH topology
 1N5W C;  3DED A;  2OAI A;  3D2H A;  1ZXI C;  2Y3R A;  2I0K A;  2E3T A;  2R8D A;  2MBR A;  5FXF A;  3HSU A;  4DNS A;  1T3Q C;  5G5H B;  4HG0 A;  4ZOH B;  1SB3 B;  5D79 A;  3W8W A;  2WDW A;  5L6F A;  5HQX A;  4PVK A;  1VAO A;  2PLI A;  5AWV A;  3TSH A;  4PVH A;  2GQT A;  4JB1 A;  1W1J A;  1DZN A;  1WVF A;  1W1L A;  2P3H A;  3NVY B;  3EJB B;  2VAO A;  3I99 A;  4O95 A;  3POP A;  3NRZ B;  3RJA A;  3EJD B;  1RM6 B;  5FXE A;  3JS8 A;  4OAL A;  1AHV A;  5FXD A;  2VFS A;  1E8H A;  2P13 A;  3LLB A;  2VFV A;  3BW7 A;  4JAY A;  3VTE A;  4PWB A;  2AXR A;  3S1F A;  1W1R A;  2RK5 A;  3RJ8 A;  3B9J B;  4BBY A;  3NVV B;  3C0P A;  1FO4 A;  5K8E A;  2W55 A;  2VFR A;  3LAE A;  1AHU A;  1FFV C;  1HSK A;  1N5X A;  4PYT A;  4UD8 A;  4XLO A;  1I19 A;  1MBT A;  2IPI A;  3EJE B;  4PWC A;  1DIQ A;  2VFT A;  3W8X A;  1W1O A;  1WVE A;  3S1C A;  4BC7 A;  2Y3S A;  1W1K A;  3NVZ B;  2Q85 A;  3TSJ A;  3ETR B;  5HMR A;  2BVF A;  2W3S A;  3KJM A;  1V97 A;  4MLA A;  3SR6 B;  3TX1 A;  2UUU A;  5AE1 A;  1FIQ B;  5L6G A;  3HRD C;  3PM9 A;  1QLT A;  4PVE A;  1N63 C;  2O3G A;  2BVG A;  3GSY A;  3FW8 A;  1W1M A;  1UXY A;  2PLS A;  1DII A;  1W1S A;  3AM9 A;  1FFU C;  1N60 C;  3FWA A;  3PQB A;  3AMZ A;  4EC3 A;  3D2J A;  1JRP A;  1AHZ A;  3AN1 A;  4PVJ A;  3EUB 3;  1MBB A;  2R2Z A;  2BVH A;  1E8F A;  1E8G A;  1QLU A;  2QKN A;  4BCA A;  1N61 C;  2NQW A;  2UUV A;  1N62 C;  5G5G B;  5I1W A;  2QPM A;  1ZR6 A;  3D2D A;  2Y08 A;  1E0Y A;  2W3R A;  3W8Z A;  5I1V A;  2EXR A;  3FW9 A;  1VDV A;  3S1D A;  5AE3 A;  1F0X A;  2Q4W A;  5AE2 A;  3DQ0 A;  4ML8 A;  1WYG A;  5FXP A;  1W1Q A;  2VFU A;  2W54 A;  3NVW B;  2GQU A;  5ADZ A;  3FW7 A;  4PZF A;  2P4P A;  2YVS A;  3S1E A;  4BC9 A;  1JRO A;  5HHZ A;  3NS1 B;  2Y4G A; 
#chains in the Genus database with same CATH homology
 1N5W C;  3DED A;  2OAI A;  3D2H A;  1ZXI C;  2Y3R A;  2I0K A;  2E3T A;  2R8D A;  2MBR A;  5FXF A;  3HSU A;  4DNS A;  1T3Q C;  5G5H B;  4HG0 A;  4ZOH B;  1SB3 B;  5D79 A;  3W8W A;  2WDW A;  5L6F A;  5HQX A;  4PVK A;  1VAO A;  2PLI A;  5AWV A;  3TSH A;  4PVH A;  2GQT A;  4JB1 A;  1W1J A;  1DZN A;  1WVF A;  1W1L A;  2P3H A;  3NVY B;  2VAO A;  3I99 A;  4O95 A;  3POP A;  3NRZ B;  3RJA A;  1RM6 B;  5FXE A;  3JS8 A;  4OAL A;  1AHV A;  5FXD A;  2VFS A;  1E8H A;  2P13 A;  3LLB A;  2VFV A;  3BW7 A;  4JAY A;  3VTE A;  4PWB A;  2AXR A;  3S1F A;  1W1R A;  2RK5 A;  3RJ8 A;  3B9J B;  4BBY A;  3NVV B;  3C0P A;  1FO4 A;  5K8E A;  2W55 A;  2VFR A;  3LAE A;  1AHU A;  1FFV C;  1HSK A;  1N5X A;  4PYT A;  4UD8 A;  4XLO A;  1I19 A;  1MBT A;  2IPI A;  4PWC A;  1DIQ A;  2VFT A;  3W8X A;  1W1O A;  1WVE A;  3S1C A;  4BC7 A;  2Y3S A;  1W1K A;  3NVZ B;  2Q85 A;  3TSJ A;  3ETR B;  5HMR A;  2BVF A;  2W3S A;  3KJM A;  1V97 A;  4MLA A;  3SR6 B;  3TX1 A;  2UUU A;  5AE1 A;  1FIQ B;  5L6G A;  3HRD C;  3PM9 A;  1QLT A;  4PVE A;  1N63 C;  2O3G A;  2BVG A;  3GSY A;  3FW8 A;  1W1M A;  1UXY A;  2PLS A;  1DII A;  1W1S A;  3AM9 A;  1FFU C;  1N60 C;  3FWA A;  3PQB A;  3AMZ A;  4EC3 A;  3D2J A;  1JRP A;  1AHZ A;  3AN1 A;  4PVJ A;  3EUB 3;  1MBB A;  2R2Z A;  2BVH A;  1E8F A;  1E8G A;  1QLU A;  2QKN A;  4BCA A;  1N61 C;  2NQW A;  2UUV A;  1N62 C;  5G5G B;  5I1W A;  2QPM A;  1ZR6 A;  3D2D A;  2Y08 A;  1E0Y A;  2W3R A;  3W8Z A;  5I1V A;  2EXR A;  3FW9 A;  1VDV A;  3S1D A;  5AE3 A;  1F0X A;  2Q4W A;  5AE2 A;  3DQ0 A;  4ML8 A;  1WYG A;  5FXP A;  1W1Q A;  2VFU A;  2W54 A;  3NVW B;  2GQU A;  5ADZ A;  3FW7 A;  4PZF A;  2P4P A;  2YVS A;  3S1E A;  4BC9 A;  1JRO A;  5HHZ A;  3NS1 B;  2Y4G A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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