3W8WA

The crystal structure of encm
Total Genus 138
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
138
sequence length
460
structure length
460
Chain Sequence
QFPQLDPATLAAFSAAFRGELIWPSDADYDEARRIWNGTIDRRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSIKVSRRLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGLVLGGGFGWLSRKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVRGGGGNFGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLPYRALQAYSFPGAVVPDRIYTKSGYLNELSDEATDTVLEHAADIASPFTQLELLYLGGAVARVPDDATAYPNRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALAGHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLFRLNQNIPP
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
source organism Streptomyces maritimus
publication title Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
pubmed doi rcsb
molecule keywords Putative FAD-dependent oxygenase EncM
total genus 138
structure length 460
sequence length 460
chains with identical sequence B
ec nomenclature ec 1.13.12.-:
pdb deposition date 2013-03-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3w8wA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3w8wA02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3w8wA03
1AHUA 1AHZA 2Q85A 3BW7A 1W1SA 2GQTA 3AMZA 5G5GB 1FFVC 4O95A 5ADZA 5L6FA 5HHZA 3TSJA 2PLSA 2BVHA 1T3QC 4HG0A 3I99A 1F0XA 1ZXIC 4PYTA 4XLOA 3S1DA 3GSYA 1W1RA 1DIIA 2EXRA 3LAEA 2I0KA 1N62C 1V97A 4MLAA 2VFSA 3PQBA 3W8ZA 1WVFA 1AHVA 3S1FA 2AXRA 1E8GA 4JB1A 4PWCA 4UD8A 3LLBA 5D79A 1N61C 1E8HA 3S1CA 3HSUA 2BVFA 5HMRA 2RK5A 4PVJA 2VFRA 3JS8A 4PZFA 2VAOA 2O3GA 3NS1B 4ZOHB 1MBBA 1E0YA 1UXYA 3C0PA 2GQUA 3PM9A 1W1KA 3HRDC 1QLUA 2W55A 3FW7A 5AE3A 1FO4A 2Y4GA 3NVWB 1WVEA 3W8XA 1JROA 4PVEA 5K8EA 5I1VA 2W3SA 1W1OA 2W3RA 1MBTA 1N5XA 3TX1A 1JRPA 3AM9A 3S1EA 3TSHA 1DIQA 2QPMA 1W1MA 5G5HB 1DZNA 3B9JB 4ML8A 2IPIA 3NRZB 1I19A 1ZR6A 4PVKA 4PVHA 3AN1A 2VFTA 3ETRB 2W54A 5FXPA 2P13A 1RM6B 1E8FA 3D2DA 1WYGA 3NVVB 5I1WA 4EC3A 4PWBA 4BBYA 3POPA 3D2HA 1FFUC 3EUB3 1QLTA 3KJMA 1N60C 5AE1A 5FXEA 3DQ0A 1N63C 2P4PA 2PLIA 2MBRA 2R2ZA 3VTEA 2Q4WA 1FIQB 3FW8A 1W1JA 3RJAA 3RJ8A 2R8DA 2E3TA 3FWAA 4JAYA 5AE2A 3DEDA 2P3HA 4BCAA 4OALA 3W8WA 2VFUA 2Y3RA 4BC7A 2VFVA 2YVSA 3D2JA 5HQXA 2Y08A 1VAOA 1W1LA 1SB3B 3SR6B 2BVGA 2NQWA 1W1QA 2OAIA 5L6GA 3NVZB 5AWVA 2QKNA 2Y3SA 5FXDA 5FXFA 4BC9A 3FW9A 1N5WC 4DNSA 2WDWA 1HSKA 1VDVA 3NVYB
chains in the Genus database with same CATH superfamily
1AHUA 1AHZA 2Q85A 3BW7A 1W1SA 2GQTA 3AMZA 5G5GB 1FFVC 4O95A 5ADZA 5L6FA 5HHZA 3TSJA 2PLSA 2BVHA 1T3QC 2UUUA 4HG0A 3I99A 1F0XA 1ZXIC 4PYTA 4XLOA 3S1DA 3GSYA 1W1RA 1DIIA 2EXRA 3LAEA 2I0KA 1N62C 1V97A 4MLAA 2VFSA 3PQBA 3W8ZA 1WVFA 2UUVA 1AHVA 3S1FA 2AXRA 1E8GA 4JB1A 4PWCA 4UD8A 3LLBA 5D79A 1N61C 1E8HA 3S1CA 3HSUA 2BVFA 5HMRA 2RK5A 4PVJA 2VFRA 3JS8A 4PZFA 2VAOA 2O3GA 3NS1B 3EJDB 4ZOHB 1MBBA 1E0YA 1UXYA 3C0PA 2GQUA 3PM9A 1W1KA 3HRDC 1QLUA 2W55A 3FW7A 5AE3A 1FO4A 2Y4GA 3NVWB 1WVEA 3W8XA 1JROA 4PVEA 5K8EA 5I1VA 2W3SA 1W1OA 2W3RA 1MBTA 1N5XA 3TX1A 1JRPA 3AM9A 3S1EA 3TSHA 1DIQA 2QPMA 1W1MA 5G5HB 1DZNA 3B9JB 4ML8A 2IPIA 3NRZB 1I19A 1ZR6A 4PVKA 4PVHA 3AN1A 2VFTA 3ETRB 2W54A 5FXPA 2P13A 1RM6B 1E8FA 3D2DA 1WYGA 3NVVB 5I1WA 4EC3A 4PWBA 4BBYA 3POPA 3D2HA 1FFUC 3EUB3 1QLTA 3KJMA 1N60C 5AE1A 5FXEA 3DQ0A 1N63C 2P4PA 2PLIA 2MBRA 2R2ZA 3VTEA 2Q4WA 1FIQB 3FW8A 1W1JA 3RJAA 3RJ8A 2R8DA 2E3TA 3FWAA 4JAYA 5AE2A 3DEDA 2P3HA 4BCAA 4OALA 3W8WA 2VFUA 2Y3RA 4BC7A 2VFVA 3EJEB 2YVSA 3D2JA 5HQXA 2Y08A 1VAOA 1W1LA 1SB3B 3SR6B 2BVGA 2NQWA 1W1QA 2OAIA 5L6GA 3NVZB 5AWVA 2QKNA 2Y3SA 5FXDA 5FXFA 4BC9A 3FW9A 1N5WC 4DNSA 2WDWA 1HSKA 1VDVA 3NVYB 3EJBB
chains in the Genus database with same CATH topology
1AHUA 1AHZA 2Q85A 3BW7A 1W1SA 2GQTA 3AMZA 5G5GB 1FFVC 4O95A 5ADZA 5L6FA 5HHZA 3TSJA 2PLSA 2BVHA 1T3QC 2UUUA 4HG0A 3I99A 1F0XA 1ZXIC 4PYTA 4XLOA 3S1DA 3GSYA 1W1RA 1DIIA 2EXRA 3LAEA 2I0KA 1N62C 1V97A 4MLAA 2VFSA 3PQBA 3W8ZA 1WVFA 2UUVA 1AHVA 3S1FA 2AXRA 1E8GA 4JB1A 4PWCA 4UD8A 3LLBA 5D79A 1N61C 1E8HA 3S1CA 3HSUA 2BVFA 5HMRA 2RK5A 4PVJA 2VFRA 3JS8A 4PZFA 2VAOA 2O3GA 3NS1B 4ZOHB 1MBBA 1E0YA 1UXYA 3C0PA 2GQUA 3PM9A 1W1KA 3HRDC 1QLUA 2W55A 3FW7A 5AE3A 1FO4A 2Y4GA 3NVWB 1WVEA 3W8XA 1JROA 4PVEA 5K8EA 5I1VA 2W3SA 1W1OA 2W3RA 1MBTA 1N5XA 3TX1A 1JRPA 3AM9A 3S1EA 3TSHA 1DIQA 2QPMA 1W1MA 5G5HB 1DZNA 3B9JB 4ML8A 2IPIA 3NRZB 1I19A 1ZR6A 4PVKA 4PVHA 3AN1A 2VFTA 3ETRB 2W54A 5FXPA 2P13A 1RM6B 1E8FA 3D2DA 1WYGA 3NVVB 5I1WA 4EC3A 4PWBA 4BBYA 3POPA 3D2HA 1FFUC 3EUB3 1QLTA 3KJMA 1N60C 5AE1A 5FXEA 3DQ0A 1N63C 2P4PA 2PLIA 2MBRA 2R2ZA 3VTEA 2Q4WA 1FIQB 3FW8A 1W1JA 3RJAA 3RJ8A 2R8DA 2E3TA 3FWAA 4JAYA 5AE2A 3DEDA 2P3HA 4BCAA 4OALA 3W8WA 2VFUA 2Y3RA 4BC7A 2VFVA 2YVSA 3D2JA 5HQXA 2Y08A 1VAOA 1W1LA 1SB3B 3SR6B 2BVGA 2NQWA 1W1QA 2OAIA 5L6GA 3NVZB 5AWVA 2QKNA 2Y3SA 5FXDA 5FXFA 4BC9A 3FW9A 1N5WC 4DNSA 2WDWA 1HSKA 1VDVA 3NVYB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1AHU A;  1AHZ A;  2Q85 A;  3BW7 A;  1W1S A;  2GQT A;  3AMZ A;  5G5G B;  1FFV C;  4O95 A;  5ADZ A;  5L6F A;  5HHZ A;  3TSJ A;  2PLS A;  2BVH A;  1T3Q C;  4HG0 A;  3I99 A;  1F0X A;  1ZXI C;  4PYT A;  4XLO A;  3S1D A;  3GSY A;  1W1R A;  1DII A;  2EXR A;  3LAE A;  2I0K A;  1N62 C;  1V97 A;  4MLA A;  2VFS A;  3PQB A;  3W8Z A;  1WVF A;  1AHV A;  3S1F A;  2AXR A;  1E8G A;  4JB1 A;  4PWC A;  4UD8 A;  3LLB A;  5D79 A;  1N61 C;  1E8H A;  3S1C A;  3HSU A;  2BVF A;  5HMR A;  2RK5 A;  4PVJ A;  2VFR A;  3JS8 A;  4PZF A;  2VAO A;  2O3G A;  3NS1 B;  4ZOH B;  1MBB A;  1E0Y A;  1UXY A;  3C0P A;  2GQU A;  3PM9 A;  1W1K A;  3HRD C;  1QLU A;  2W55 A;  3FW7 A;  5AE3 A;  1FO4 A;  2Y4G A;  3NVW B;  1WVE A;  3W8X A;  1JRO A;  4PVE A;  5K8E A;  5I1V A;  2W3S A;  1W1O A;  2W3R A;  1MBT A;  1N5X A;  3TX1 A;  1JRP A;  3AM9 A;  3S1E A;  3TSH A;  1DIQ A;  2QPM A;  1W1M A;  5G5H B;  1DZN A;  3B9J B;  4ML8 A;  2IPI A;  3NRZ B;  1I19 A;  1ZR6 A;  4PVK A;  4PVH A;  3AN1 A;  2VFT A;  3ETR B;  2W54 A;  5FXP A;  2P13 A;  1RM6 B;  1E8F A;  3D2D A;  1WYG A;  3NVV B;  5I1W A;  4EC3 A;  4PWB A;  4BBY A;  3POP A;  3D2H A;  1FFU C;  3EUB 3;  1QLT A;  3KJM A;  1N60 C;  5AE1 A;  5FXE A;  3DQ0 A;  1N63 C;  2P4P A;  2PLI A;  2MBR A;  2R2Z A;  3VTE A;  2Q4W A;  1FIQ B;  3FW8 A;  1W1J A;  3RJA A;  3RJ8 A;  2R8D A;  2E3T A;  3FWA A;  4JAY A;  5AE2 A;  3DED A;  2P3H A;  4BCA A;  4OAL A;  3W8W A;  2VFU A;  2Y3R A;  4BC7 A;  2VFV A;  2YVS A;  3D2J A;  5HQX A;  2Y08 A;  1VAO A;  1W1L A;  1SB3 B;  3SR6 B;  2BVG A;  2NQW A;  1W1Q A;  2OAI A;  5L6G A;  3NVZ B;  5AWV A;  2QKN A;  2Y3S A;  5FXD A;  5FXF A;  4BC9 A;  3FW9 A;  1N5W C;  4DNS A;  2WDW A;  1HSK A;  1VDV A;  3NVY B; 
#chains in the Genus database with same CATH topology
 1AHU A;  1AHZ A;  2Q85 A;  3BW7 A;  1W1S A;  2GQT A;  3AMZ A;  5G5G B;  1FFV C;  4O95 A;  5ADZ A;  5L6F A;  5HHZ A;  3TSJ A;  2PLS A;  2BVH A;  1T3Q C;  2UUU A;  4HG0 A;  3I99 A;  1F0X A;  1ZXI C;  4PYT A;  4XLO A;  3S1D A;  3GSY A;  1W1R A;  1DII A;  2EXR A;  3LAE A;  2I0K A;  1N62 C;  1V97 A;  4MLA A;  2VFS A;  3PQB A;  3W8Z A;  1WVF A;  2UUV A;  1AHV A;  3S1F A;  2AXR A;  1E8G A;  4JB1 A;  4PWC A;  4UD8 A;  3LLB A;  5D79 A;  1N61 C;  1E8H A;  3S1C A;  3HSU A;  2BVF A;  5HMR A;  2RK5 A;  4PVJ A;  2VFR A;  3JS8 A;  4PZF A;  2VAO A;  2O3G A;  3NS1 B;  3EJD B;  4ZOH B;  1MBB A;  1E0Y A;  1UXY A;  3C0P A;  2GQU A;  3PM9 A;  1W1K A;  3HRD C;  1QLU A;  2W55 A;  3FW7 A;  5AE3 A;  1FO4 A;  2Y4G A;  3NVW B;  1WVE A;  3W8X A;  1JRO A;  4PVE A;  5K8E A;  5I1V A;  2W3S A;  1W1O A;  2W3R A;  1MBT A;  1N5X A;  3TX1 A;  1JRP A;  3AM9 A;  3S1E A;  3TSH A;  1DIQ A;  2QPM A;  1W1M A;  5G5H B;  1DZN A;  3B9J B;  4ML8 A;  2IPI A;  3NRZ B;  1I19 A;  1ZR6 A;  4PVK A;  4PVH A;  3AN1 A;  2VFT A;  3ETR B;  2W54 A;  5FXP A;  2P13 A;  1RM6 B;  1E8F A;  3D2D A;  1WYG A;  3NVV B;  5I1W A;  4EC3 A;  4PWB A;  4BBY A;  3POP A;  3D2H A;  1FFU C;  3EUB 3;  1QLT A;  3KJM A;  1N60 C;  5AE1 A;  5FXE A;  3DQ0 A;  1N63 C;  2P4P A;  2PLI A;  2MBR A;  2R2Z A;  3VTE A;  2Q4W A;  1FIQ B;  3FW8 A;  1W1J A;  3RJA A;  3RJ8 A;  2R8D A;  2E3T A;  3FWA A;  4JAY A;  5AE2 A;  3DED A;  2P3H A;  4BCA A;  4OAL A;  3W8W A;  2VFU A;  2Y3R A;  4BC7 A;  2VFV A;  3EJE B;  2YVS A;  3D2J A;  5HQX A;  2Y08 A;  1VAO A;  1W1L A;  1SB3 B;  3SR6 B;  2BVG A;  2NQW A;  1W1Q A;  2OAI A;  5L6G A;  3NVZ B;  5AWV A;  2QKN A;  2Y3S A;  5FXD A;  5FXF A;  4BC9 A;  3FW9 A;  1N5W C;  4DNS A;  2WDW A;  1HSK A;  1VDV A;  3NVY B;  3EJB B; 
#chains in the Genus database with same CATH homology
 1AHU A;  1AHZ A;  2Q85 A;  3BW7 A;  1W1S A;  2GQT A;  3AMZ A;  5G5G B;  1FFV C;  4O95 A;  5ADZ A;  5L6F A;  5HHZ A;  3TSJ A;  2PLS A;  2BVH A;  1T3Q C;  2UUU A;  4HG0 A;  3I99 A;  1F0X A;  1ZXI C;  4PYT A;  4XLO A;  3S1D A;  3GSY A;  1W1R A;  1DII A;  2EXR A;  3LAE A;  2I0K A;  1N62 C;  1V97 A;  4MLA A;  2VFS A;  3PQB A;  3W8Z A;  1WVF A;  2UUV A;  1AHV A;  3S1F A;  2AXR A;  1E8G A;  4JB1 A;  4PWC A;  4UD8 A;  3LLB A;  5D79 A;  1N61 C;  1E8H A;  3S1C A;  3HSU A;  2BVF A;  5HMR A;  2RK5 A;  4PVJ A;  2VFR A;  3JS8 A;  4PZF A;  2VAO A;  2O3G A;  3NS1 B;  4ZOH B;  1MBB A;  1E0Y A;  1UXY A;  3C0P A;  2GQU A;  3PM9 A;  1W1K A;  3HRD C;  1QLU A;  2W55 A;  3FW7 A;  5AE3 A;  1FO4 A;  2Y4G A;  3NVW B;  1WVE A;  3W8X A;  1JRO A;  4PVE A;  5K8E A;  5I1V A;  2W3S A;  1W1O A;  2W3R A;  1MBT A;  1N5X A;  3TX1 A;  1JRP A;  3AM9 A;  3S1E A;  3TSH A;  1DIQ A;  2QPM A;  1W1M A;  5G5H B;  1DZN A;  3B9J B;  4ML8 A;  2IPI A;  3NRZ B;  1I19 A;  1ZR6 A;  4PVK A;  4PVH A;  3AN1 A;  2VFT A;  3ETR B;  2W54 A;  5FXP A;  2P13 A;  1RM6 B;  1E8F A;  3D2D A;  1WYG A;  3NVV B;  5I1W A;  4EC3 A;  4PWB A;  4BBY A;  3POP A;  3D2H A;  1FFU C;  3EUB 3;  1QLT A;  3KJM A;  1N60 C;  5AE1 A;  5FXE A;  3DQ0 A;  1N63 C;  2P4P A;  2PLI A;  2MBR A;  2R2Z A;  3VTE A;  2Q4W A;  1FIQ B;  3FW8 A;  1W1J A;  3RJA A;  3RJ8 A;  2R8D A;  2E3T A;  3FWA A;  4JAY A;  5AE2 A;  3DED A;  2P3H A;  4BCA A;  4OAL A;  3W8W A;  2VFU A;  2Y3R A;  4BC7 A;  2VFV A;  2YVS A;  3D2J A;  5HQX A;  2Y08 A;  1VAO A;  1W1L A;  1SB3 B;  3SR6 B;  2BVG A;  2NQW A;  1W1Q A;  2OAI A;  5L6G A;  3NVZ B;  5AWV A;  2QKN A;  2Y3S A;  5FXD A;  5FXF A;  4BC9 A;  3FW9 A;  1N5W C;  4DNS A;  2WDW A;  1HSK A;  1VDV A;  3NVY B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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