3W8WA

The crystal structure of encm
Total Genus 138
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
138
sequence length
460
structure length
460
Chain Sequence
b'QFPQLDPATLAAFSAAFRGELIWPSDADYDEARRIWNGTIDRRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSIKVSRRLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGLVLGGGFGWLSRKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVRGGGGNFGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLPYRALQAYSFPGAVVPDRIYTKSGYLNELSDEATDTVLEHAADIASPFTQLELLYLGGAVARVPDDATAYPNRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALAGHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLFRLNQNIPP'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
pubmed doi rcsb
molecule keywords Putative FAD-dependent oxygenase EncM
source organism Streptomyces maritimus
molecule tags Oxidoreductase
total genus 138
structure length 460
sequence length 460
chains with identical sequence B
ec nomenclature ec 1.13.12.-:
pdb deposition date 2013-03-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3w8wA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3w8wA02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3w8wA03
2P3HA 2GQTA 2R2ZA 5G5HB 2Q4WA 2BVGA 3C0PA 3I99A 5HMRA 3AN1A 4BC7A 2IPIA 2Y4GA 1N60C 1WYGA 3ETRB 1FO4A 1ZR6A 3RJAA 2W54A 2P13A 5ADZA 1DZNA 4ZOHB 5L6FA 4MLAA 5AE1A 2EXRA 1E8HA 2P4PA 1FFVC 2GQUA 1WVFA 4PZFA 1W1RA 4PVEA 2I0KA 4ML8A 1QLUA 1W1QA 3NVWB 3LLBA 1AHUA 1AHVA 1W1MA 5FXFA 1QLTA 2Y3SA 3NVVB 5AE2A 1SB3B 1AHZA 1MBBA 3POPA 1WVEA 2W3SA 3D2JA 1VAOA 5FXDA 3LAEA 3AMZA 1N62C 1W1JA 2RK5A 4BBYA 1N63C 5D79A 3NVYB 5I1WA 5L6GA 4EC3A 2QPMA 1FIQB 2AXRA 4JAYA 4UD8A 5HQXA 3NS1B 3DEDA 1W1OA 3S1CA 3FW8A 3W8WA 2Q85A 5I1VA 3BW7A 3S1DA 3PQBA 4BCAA 5AE3A 3PM9A 4PVKA 5AWVA 3NRZB 2W55A 3B9JB 4JB1A 2BVHA 4PWCA 3TSJA 3RJ8A 2VFRA 2PLIA 5FXEA 3TX1A 3W8ZA 2O3GA 3EUB3 2PLSA 3FWAA 1F0XA 4PWBA 3TSHA 1E8GA 3D2DA 2BVFA 4OALA 2VFSA 3VTEA 2NQWA 3KJMA 4PYTA 1HSKA 5HHZA 2VFTA 3JS8A 5FXPA 1I19A 3W8XA 2WDWA 3S1EA 3S1FA 3FW7A 2VAOA 1VDVA 1ZXIC 3HRDC 1N61C 2Y08A 2YVSA 3HSUA 1MBTA 4O95A 1FFUC 4BC9A 1W1LA 2E3TA 1V97A 5K8EA 1RM6B 1UXYA 2R8DA 4HG0A 3DQ0A 4XLOA 1DIIA 2OAIA 3SR6B 2QKNA 5G5GB 1W1SA 3FW9A 3GSYA 4PVJA 1N5XA 4PVHA 1N5WC 2W3RA 4DNSA 1W1KA 3AM9A 2Y3RA 3NVZB 1E8FA 2VFVA 2VFUA 1JRPA 1T3QC 1E0YA 2MBRA 1JROA 1DIQA 3D2HA
chains in the Genus database with same CATH superfamily
2P3HA 2GQTA 2R2ZA 5G5HB 2Q4WA 2BVGA 3C0PA 3I99A 5HMRA 3AN1A 4BC7A 2IPIA 2Y4GA 1N60C 1WYGA 3ETRB 1FO4A 1ZR6A 3RJAA 2W54A 2P13A 5ADZA 1DZNA 4ZOHB 5L6FA 4MLAA 5AE1A 2EXRA 1E8HA 2P4PA 1FFVC 2GQUA 1WVFA 4PZFA 1W1RA 4PVEA 2I0KA 4ML8A 1QLUA 1W1QA 3NVWB 3LLBA 1AHUA 1AHVA 1W1MA 5FXFA 1QLTA 2Y3SA 3NVVB 5AE2A 1SB3B 2UUUA 1AHZA 1MBBA 3POPA 1WVEA 2W3SA 3D2JA 1VAOA 5FXDA 3LAEA 3AMZA 1N62C 1W1JA 2RK5A 4BBYA 1N63C 3NVYB 5D79A 5I1WA 5L6GA 4EC3A 2QPMA 3EJEB 1FIQB 2AXRA 4JAYA 4UD8A 5HQXA 3NS1B 3DEDA 1W1OA 3S1CA 3FW8A 3W8WA 2Q85A 5I1VA 3BW7A 3S1DA 3PQBA 4BCAA 5AE3A 3PM9A 4PVKA 5AWVA 3NRZB 2W55A 3B9JB 4JB1A 2BVHA 4PWCA 3TSJA 3RJ8A 2VFRA 2PLIA 5FXEA 3TX1A 3W8ZA 2O3GA 3EUB3 2PLSA 3FWAA 1F0XA 4PWBA 3TSHA 1E8GA 3D2DA 2BVFA 3EJBB 4OALA 2VFSA 3VTEA 2NQWA 3KJMA 4PYTA 1HSKA 5HHZA 2VFTA 3JS8A 5FXPA 1I19A 3W8XA 3EJDB 3S1EA 3S1FA 2WDWA 3FW7A 2VAOA 1VDVA 1ZXIC 3HRDC 1N61C 2UUVA 2Y08A 2YVSA 3HSUA 1MBTA 4O95A 1FFUC 4BC9A 1W1LA 2E3TA 1V97A 5K8EA 1RM6B 1UXYA 2R8DA 4HG0A 3DQ0A 4XLOA 1DIIA 2OAIA 3SR6B 2QKNA 5G5GB 1W1SA 3FW9A 3GSYA 4PVJA 1N5XA 4PVHA 1N5WC 2W3RA 4DNSA 1W1KA 3AM9A 2Y3RA 3NVZB 1E8FA 2VFVA 2VFUA 1JRPA 1T3QC 1E0YA 2MBRA 1JROA 1DIQA 3D2HA
chains in the Genus database with same CATH topology
2P3HA 2GQTA 2R2ZA 5G5HB 2Q4WA 2BVGA 3C0PA 3I99A 5HMRA 3AN1A 4BC7A 2IPIA 2Y4GA 1N60C 1WYGA 3ETRB 1FO4A 1ZR6A 3RJAA 2W54A 2P13A 5ADZA 1DZNA 4ZOHB 5L6FA 4MLAA 5AE1A 2EXRA 1E8HA 2P4PA 1FFVC 2GQUA 1WVFA 4PZFA 1W1RA 4PVEA 2I0KA 4ML8A 1QLUA 1W1QA 3NVWB 3LLBA 1AHUA 1AHVA 1W1MA 5FXFA 1QLTA 2Y3SA 3NVVB 5AE2A 1SB3B 2UUUA 1AHZA 1MBBA 3POPA 1WVEA 2W3SA 3D2JA 1VAOA 5FXDA 3LAEA 3AMZA 1N62C 1W1JA 2RK5A 4BBYA 1N63C 5D79A 3NVYB 5I1WA 5L6GA 4EC3A 2QPMA 1FIQB 2AXRA 4JAYA 4UD8A 5HQXA 3NS1B 3DEDA 1W1OA 3S1CA 3FW8A 3W8WA 2Q85A 5I1VA 3BW7A 3S1DA 3PQBA 4BCAA 5AE3A 3PM9A 4PVKA 5AWVA 3NRZB 2W55A 3B9JB 4JB1A 2BVHA 4PWCA 3TSJA 3RJ8A 2VFRA 2PLIA 5FXEA 3TX1A 3W8ZA 2O3GA 3EUB3 2PLSA 3FWAA 1F0XA 4PWBA 3TSHA 1E8GA 3D2DA 2BVFA 4OALA 2VFSA 3VTEA 2NQWA 3KJMA 4PYTA 1HSKA 5HHZA 2VFTA 3JS8A 5FXPA 1I19A 3W8XA 2WDWA 3S1EA 3S1FA 3FW7A 2VAOA 1VDVA 1ZXIC 3HRDC 1N61C 2UUVA 2Y08A 2YVSA 3HSUA 1MBTA 4O95A 1FFUC 4BC9A 1W1LA 2E3TA 1V97A 5K8EA 1RM6B 1UXYA 2R8DA 4HG0A 3DQ0A 4XLOA 1DIIA 2OAIA 3SR6B 2QKNA 5G5GB 1W1SA 3FW9A 3GSYA 4PVJA 1N5XA 4PVHA 1N5WC 2W3RA 4DNSA 1W1KA 3AM9A 2Y3RA 3NVZB 1E8FA 2VFVA 2VFUA 1JRPA 1T3QC 1E0YA 2MBRA 1JROA 1DIQA 3D2HA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2P3H A;  2GQT A;  2R2Z A;  5G5H B;  2Q4W A;  2BVG A;  3C0P A;  3I99 A;  5HMR A;  3AN1 A;  4BC7 A;  2IPI A;  2Y4G A;  1N60 C;  1WYG A;  3ETR B;  1FO4 A;  1ZR6 A;  3RJA A;  2W54 A;  2P13 A;  5ADZ A;  1DZN A;  4ZOH B;  5L6F A;  4MLA A;  5AE1 A;  2EXR A;  1E8H A;  2P4P A;  1FFV C;  2GQU A;  1WVF A;  4PZF A;  1W1R A;  4PVE A;  2I0K A;  4ML8 A;  1QLU A;  1W1Q A;  3NVW B;  3LLB A;  1AHU A;  1AHV A;  1W1M A;  5FXF A;  1QLT A;  2Y3S A;  3NVV B;  5AE2 A;  1SB3 B;  1AHZ A;  1MBB A;  3POP A;  1WVE A;  2W3S A;  3D2J A;  1VAO A;  5FXD A;  3LAE A;  3AMZ A;  1N62 C;  1W1J A;  2RK5 A;  4BBY A;  1N63 C;  5D79 A;  3NVY B;  5I1W A;  5L6G A;  4EC3 A;  2QPM A;  1FIQ B;  2AXR A;  4JAY A;  4UD8 A;  5HQX A;  3NS1 B;  3DED A;  1W1O A;  3S1C A;  3FW8 A;  3W8W A;  2Q85 A;  5I1V A;  3BW7 A;  3S1D A;  3PQB A;  4BCA A;  5AE3 A;  3PM9 A;  4PVK A;  5AWV A;  3NRZ B;  2W55 A;  3B9J B;  4JB1 A;  2BVH A;  4PWC A;  3TSJ A;  3RJ8 A;  2VFR A;  2PLI A;  5FXE A;  3TX1 A;  3W8Z A;  2O3G A;  3EUB 3;  2PLS A;  3FWA A;  1F0X A;  4PWB A;  3TSH A;  1E8G A;  3D2D A;  2BVF A;  4OAL A;  2VFS A;  3VTE A;  2NQW A;  3KJM A;  4PYT A;  1HSK A;  5HHZ A;  2VFT A;  3JS8 A;  5FXP A;  1I19 A;  3W8X A;  2WDW A;  3S1E A;  3S1F A;  3FW7 A;  2VAO A;  1VDV A;  1ZXI C;  3HRD C;  1N61 C;  2Y08 A;  2YVS A;  3HSU A;  1MBT A;  4O95 A;  1FFU C;  4BC9 A;  1W1L A;  2E3T A;  1V97 A;  5K8E A;  1RM6 B;  1UXY A;  2R8D A;  4HG0 A;  3DQ0 A;  4XLO A;  1DII A;  2OAI A;  3SR6 B;  2QKN A;  5G5G B;  1W1S A;  3FW9 A;  3GSY A;  4PVJ A;  1N5X A;  4PVH A;  1N5W C;  2W3R A;  4DNS A;  1W1K A;  3AM9 A;  2Y3R A;  3NVZ B;  1E8F A;  2VFV A;  2VFU A;  1JRP A;  1T3Q C;  1E0Y A;  2MBR A;  1JRO A;  1DIQ A;  3D2H A; 
#chains in the Genus database with same CATH topology
 2P3H A;  2GQT A;  2R2Z A;  5G5H B;  2Q4W A;  2BVG A;  3C0P A;  3I99 A;  5HMR A;  3AN1 A;  4BC7 A;  2IPI A;  2Y4G A;  1N60 C;  1WYG A;  3ETR B;  1FO4 A;  1ZR6 A;  3RJA A;  2W54 A;  2P13 A;  5ADZ A;  1DZN A;  4ZOH B;  5L6F A;  4MLA A;  5AE1 A;  2EXR A;  1E8H A;  2P4P A;  1FFV C;  2GQU A;  1WVF A;  4PZF A;  1W1R A;  4PVE A;  2I0K A;  4ML8 A;  1QLU A;  1W1Q A;  3NVW B;  3LLB A;  1AHU A;  1AHV A;  1W1M A;  5FXF A;  1QLT A;  2Y3S A;  3NVV B;  5AE2 A;  1SB3 B;  2UUU A;  1AHZ A;  1MBB A;  3POP A;  1WVE A;  2W3S A;  3D2J A;  1VAO A;  5FXD A;  3LAE A;  3AMZ A;  1N62 C;  1W1J A;  2RK5 A;  4BBY A;  1N63 C;  3NVY B;  5D79 A;  5I1W A;  5L6G A;  4EC3 A;  2QPM A;  3EJE B;  1FIQ B;  2AXR A;  4JAY A;  4UD8 A;  5HQX A;  3NS1 B;  3DED A;  1W1O A;  3S1C A;  3FW8 A;  3W8W A;  2Q85 A;  5I1V A;  3BW7 A;  3S1D A;  3PQB A;  4BCA A;  5AE3 A;  3PM9 A;  4PVK A;  5AWV A;  3NRZ B;  2W55 A;  3B9J B;  4JB1 A;  2BVH A;  4PWC A;  3TSJ A;  3RJ8 A;  2VFR A;  2PLI A;  5FXE A;  3TX1 A;  3W8Z A;  2O3G A;  3EUB 3;  2PLS A;  3FWA A;  1F0X A;  4PWB A;  3TSH A;  1E8G A;  3D2D A;  2BVF A;  3EJB B;  4OAL A;  2VFS A;  3VTE A;  2NQW A;  3KJM A;  4PYT A;  1HSK A;  5HHZ A;  2VFT A;  3JS8 A;  5FXP A;  1I19 A;  3W8X A;  3EJD B;  3S1E A;  3S1F A;  2WDW A;  3FW7 A;  2VAO A;  1VDV A;  1ZXI C;  3HRD C;  1N61 C;  2UUV A;  2Y08 A;  2YVS A;  3HSU A;  1MBT A;  4O95 A;  1FFU C;  4BC9 A;  1W1L A;  2E3T A;  1V97 A;  5K8E A;  1RM6 B;  1UXY A;  2R8D A;  4HG0 A;  3DQ0 A;  4XLO A;  1DII A;  2OAI A;  3SR6 B;  2QKN A;  5G5G B;  1W1S A;  3FW9 A;  3GSY A;  4PVJ A;  1N5X A;  4PVH A;  1N5W C;  2W3R A;  4DNS A;  1W1K A;  3AM9 A;  2Y3R A;  3NVZ B;  1E8F A;  2VFV A;  2VFU A;  1JRP A;  1T3Q C;  1E0Y A;  2MBR A;  1JRO A;  1DIQ A;  3D2H A; 
#chains in the Genus database with same CATH homology
 2P3H A;  2GQT A;  2R2Z A;  5G5H B;  2Q4W A;  2BVG A;  3C0P A;  3I99 A;  5HMR A;  3AN1 A;  4BC7 A;  2IPI A;  2Y4G A;  1N60 C;  1WYG A;  3ETR B;  1FO4 A;  1ZR6 A;  3RJA A;  2W54 A;  2P13 A;  5ADZ A;  1DZN A;  4ZOH B;  5L6F A;  4MLA A;  5AE1 A;  2EXR A;  1E8H A;  2P4P A;  1FFV C;  2GQU A;  1WVF A;  4PZF A;  1W1R A;  4PVE A;  2I0K A;  4ML8 A;  1QLU A;  1W1Q A;  3NVW B;  3LLB A;  1AHU A;  1AHV A;  1W1M A;  5FXF A;  1QLT A;  2Y3S A;  3NVV B;  5AE2 A;  1SB3 B;  2UUU A;  1AHZ A;  1MBB A;  3POP A;  1WVE A;  2W3S A;  3D2J A;  1VAO A;  5FXD A;  3LAE A;  3AMZ A;  1N62 C;  1W1J A;  2RK5 A;  4BBY A;  1N63 C;  5D79 A;  3NVY B;  5I1W A;  5L6G A;  4EC3 A;  2QPM A;  1FIQ B;  2AXR A;  4JAY A;  4UD8 A;  5HQX A;  3NS1 B;  3DED A;  1W1O A;  3S1C A;  3FW8 A;  3W8W A;  2Q85 A;  5I1V A;  3BW7 A;  3S1D A;  3PQB A;  4BCA A;  5AE3 A;  3PM9 A;  4PVK A;  5AWV A;  3NRZ B;  2W55 A;  3B9J B;  4JB1 A;  2BVH A;  4PWC A;  3TSJ A;  3RJ8 A;  2VFR A;  2PLI A;  5FXE A;  3TX1 A;  3W8Z A;  2O3G A;  3EUB 3;  2PLS A;  3FWA A;  1F0X A;  4PWB A;  3TSH A;  1E8G A;  3D2D A;  2BVF A;  4OAL A;  2VFS A;  3VTE A;  2NQW A;  3KJM A;  4PYT A;  1HSK A;  5HHZ A;  2VFT A;  3JS8 A;  5FXP A;  1I19 A;  3W8X A;  2WDW A;  3S1E A;  3S1F A;  3FW7 A;  2VAO A;  1VDV A;  1ZXI C;  3HRD C;  1N61 C;  2UUV A;  2Y08 A;  2YVS A;  3HSU A;  1MBT A;  4O95 A;  1FFU C;  4BC9 A;  1W1L A;  2E3T A;  1V97 A;  5K8E A;  1RM6 B;  1UXY A;  2R8D A;  4HG0 A;  3DQ0 A;  4XLO A;  1DII A;  2OAI A;  3SR6 B;  2QKN A;  5G5G B;  1W1S A;  3FW9 A;  3GSY A;  4PVJ A;  1N5X A;  4PVH A;  1N5W C;  2W3R A;  4DNS A;  1W1K A;  3AM9 A;  2Y3R A;  3NVZ B;  1E8F A;  2VFV A;  2VFU A;  1JRP A;  1T3Q C;  1E0Y A;  2MBR A;  1JRO A;  1DIQ A;  3D2H A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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