3W8WA

The crystal structure of encm
Total Genus 138
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
138
sequence length
460
structure length
460
Chain Sequence
QFPQLDPATLAAFSAAFRGELIWPSDADYDEARRIWNGTIDRRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSIKVSRRLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGLVLGGGFGWLSRKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVRGGGGNFGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLPYRALQAYSFPGAVVPDRIYTKSGYLNELSDEATDTVLEHAADIASPFTQLELLYLGGAVARVPDDATAYPNRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALAGHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLFRLNQNIPP
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
pubmed doi rcsb
source organism Streptomyces maritimus
molecule tags Oxidoreductase
molecule keywords Putative FAD-dependent oxygenase EncM
total genus 138
structure length 460
sequence length 460
chains with identical sequence B
ec nomenclature ec 1.13.12.-:
pdb deposition date 2013-03-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3w8wA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3w8wA02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3w8wA03
3D2DA 3DQ0A 4UD8A 3B9JB 3FW7A 4BCAA 1W1MA 3FW8A 1T3QC 3TX1A 1N5XA 1W1RA 2EXRA 1MBTA 1W1OA 3NVVB 5FXDA 1UXYA 5FXPA 2OAIA 2AXRA 1ZR6A 2Q4WA 3I99A 4PVJA 2P13A 1AHUA 3JS8A 5AWVA 4ML8A 1N61C 1ZXIC 2GQTA 3PQBA 4DNSA 1FFUC 3PM9A 1FFVC 5AE1A 2Y3RA 3AMZA 4BC7A 4HG0A 2Y4GA 5I1WA 5HQXA 1W1JA 2P3HA 3HSUA 2VFTA 4BC9A 3S1FA 4O95A 5FXFA 5AE3A 1E8FA 1JRPA 2R2ZA 2YVSA 2IPIA 2VFRA 3RJAA 1MBBA 2W3RA 3FW9A 3S1CA 1HSKA 1I19A 2VFVA 3AN1A 3ETRB 5HMRA 5D79A 2R8DA 1AHZA 3VTEA 2VAOA 4XLOA 1VDVA 1N62C 4PWCA 2Y08A 2VFUA 4JAYA 3POPA 2RK5A 2NQWA 1DIQA 1N63C 1WVEA 2Y3SA 2O3GA 1E8GA 3EUB3 5AE2A 1AHVA 3FWAA 1E0YA 4PVKA 1RM6B 5L6GA 4JB1A 5G5GB 2PLIA 2I0KA 3TSHA 3LAEA 1N60C 3BW7A 2E3TA 3GSYA 4PVEA 4PWBA 4PZFA 5FXEA 4ZOHB 5HHZA 3NVZB 1W1QA 1WYGA 5I1VA 2GQUA 3NRZB 5K8EA 1DIIA 3S1DA 3W8XA 3NVYB 2Q85A 2VFSA 2BVFA 1SB3B 5G5HB 1JROA 1W1KA 1F0XA 3D2HA 1W1SA 3D2JA 1DZNA 3KJMA 1QLTA 1FIQB 1V97A 2QKNA 5L6FA 2P4PA 3LLBA 3SR6B 4PVHA 2PLSA 3NS1B 2W55A 4OALA 4EC3A 2W3SA 1W1LA 3S1EA 3W8WA 4MLAA 3DEDA 4BBYA 3HRDC 5ADZA 2BVHA 3TSJA 3AM9A 1E8HA 2QPMA 2W54A 3W8ZA 1N5WC 3NVWB 3RJ8A 2MBRA 1VAOA 1QLUA 2BVGA 2WDWA 1WVFA 4PYTA 1FO4A 3C0PA
chains in the Genus database with same CATH superfamily
3D2DA 3DQ0A 4UD8A 3B9JB 3FW7A 4BCAA 1W1MA 3FW8A 1T3QC 3TX1A 1N5XA 1W1RA 3EJDB 2EXRA 1MBTA 1W1OA 3NVVB 5FXDA 1UXYA 5FXPA 2OAIA 2AXRA 1ZR6A 2Q4WA 3I99A 4PVJA 2P13A 1AHUA 3JS8A 5AWVA 4ML8A 1N61C 1ZXIC 2GQTA 3PQBA 4DNSA 1FFUC 3PM9A 1FFVC 5AE1A 2Y3RA 3AMZA 4BC7A 4HG0A 2Y4GA 5I1WA 5HQXA 1W1JA 2P3HA 3HSUA 2VFTA 4BC9A 3S1FA 4O95A 5FXFA 5AE3A 1E8FA 1JRPA 2IPIA 2R2ZA 2YVSA 2VFRA 3RJAA 1MBBA 2W3RA 3FW9A 3S1CA 1HSKA 1I19A 2VFVA 3AN1A 3ETRB 5HMRA 5D79A 2R8DA 1AHZA 3VTEA 2VAOA 4XLOA 1VDVA 1N62C 4PWCA 2Y08A 2VFUA 4JAYA 3POPA 2RK5A 2UUVA 2NQWA 1DIQA 1N63C 1WVEA 2Y3SA 2O3GA 1E8GA 3EUB3 5AE2A 1AHVA 3FWAA 1E0YA 4PVKA 3EJEB 1RM6B 5L6GA 4JB1A 5G5GB 2PLIA 2I0KA 3TSHA 3LAEA 1N60C 3BW7A 2E3TA 3GSYA 4PVEA 4PWBA 4PZFA 5FXEA 4ZOHB 5HHZA 3NVZB 1W1QA 1WYGA 5I1VA 2GQUA 3NRZB 5K8EA 1DIIA 3NVYB 3S1DA 3W8XA 2Q85A 2VFSA 2BVFA 1SB3B 5G5HB 1JROA 1W1KA 1F0XA 3D2HA 1W1SA 3D2JA 1DZNA 3KJMA 3EJBB 1QLTA 1FIQB 1V97A 2QKNA 5L6FA 2P4PA 3LLBA 3SR6B 4PVHA 2PLSA 3NS1B 2W55A 4OALA 4EC3A 2W3SA 2UUUA 1W1LA 3S1EA 3W8WA 4MLAA 3DEDA 4BBYA 3HRDC 5ADZA 2BVHA 3TSJA 3AM9A 1E8HA 2QPMA 2W54A 3W8ZA 1N5WC 3NVWB 3RJ8A 2MBRA 1VAOA 1QLUA 2BVGA 2WDWA 1WVFA 4PYTA 1FO4A 3C0PA
chains in the Genus database with same CATH topology
3D2DA 3DQ0A 4UD8A 3B9JB 3FW7A 4BCAA 1W1MA 3FW8A 1T3QC 3TX1A 1N5XA 1W1RA 2EXRA 1MBTA 1W1OA 3NVVB 5FXDA 1UXYA 5FXPA 2OAIA 2AXRA 1ZR6A 2Q4WA 3I99A 4PVJA 2P13A 1AHUA 3JS8A 5AWVA 4ML8A 1N61C 1ZXIC 2GQTA 3PQBA 4DNSA 1FFUC 3PM9A 1FFVC 5AE1A 2Y3RA 3AMZA 4BC7A 4HG0A 2Y4GA 5I1WA 5HQXA 1W1JA 2P3HA 3HSUA 2VFTA 4BC9A 3S1FA 4O95A 5FXFA 5AE3A 1E8FA 1JRPA 2IPIA 2R2ZA 2YVSA 2VFRA 3RJAA 1MBBA 2W3RA 3FW9A 3S1CA 1HSKA 1I19A 2VFVA 3AN1A 3ETRB 5HMRA 5D79A 2R8DA 1AHZA 3VTEA 2VAOA 4XLOA 1VDVA 1N62C 4PWCA 2Y08A 2VFUA 4JAYA 3POPA 2RK5A 2UUVA 2NQWA 1DIQA 1N63C 1WVEA 2Y3SA 2O3GA 1E8GA 3EUB3 5AE2A 1AHVA 3FWAA 1E0YA 4PVKA 1RM6B 5L6GA 4JB1A 5G5GB 2PLIA 2I0KA 3TSHA 3LAEA 1N60C 3BW7A 2E3TA 3GSYA 4PVEA 4PWBA 4PZFA 5FXEA 4ZOHB 5HHZA 3NVZB 1W1QA 1WYGA 5I1VA 2GQUA 3NRZB 5K8EA 1DIIA 3S1DA 3W8XA 3NVYB 2Q85A 2VFSA 2BVFA 1SB3B 5G5HB 1JROA 1W1KA 1F0XA 3D2HA 1W1SA 3D2JA 1DZNA 3KJMA 1QLTA 1FIQB 1V97A 2QKNA 5L6FA 2P4PA 3LLBA 3SR6B 4PVHA 2PLSA 3NS1B 2W55A 4OALA 4EC3A 2W3SA 2UUUA 1W1LA 3S1EA 3W8WA 4MLAA 3DEDA 4BBYA 3HRDC 5ADZA 2BVHA 3TSJA 3AM9A 1E8HA 2QPMA 2W54A 3W8ZA 1N5WC 3NVWB 3RJ8A 2MBRA 1VAOA 1QLUA 2BVGA 2WDWA 1WVFA 4PYTA 1FO4A 3C0PA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3D2D A;  3DQ0 A;  4UD8 A;  3B9J B;  3FW7 A;  4BCA A;  1W1M A;  3FW8 A;  1T3Q C;  3TX1 A;  1N5X A;  1W1R A;  2EXR A;  1MBT A;  1W1O A;  3NVV B;  5FXD A;  1UXY A;  5FXP A;  2OAI A;  2AXR A;  1ZR6 A;  2Q4W A;  3I99 A;  4PVJ A;  2P13 A;  1AHU A;  3JS8 A;  5AWV A;  4ML8 A;  1N61 C;  1ZXI C;  2GQT A;  3PQB A;  4DNS A;  1FFU C;  3PM9 A;  1FFV C;  5AE1 A;  2Y3R A;  3AMZ A;  4BC7 A;  4HG0 A;  2Y4G A;  5I1W A;  5HQX A;  1W1J A;  2P3H A;  3HSU A;  2VFT A;  4BC9 A;  3S1F A;  4O95 A;  5FXF A;  5AE3 A;  1E8F A;  1JRP A;  2R2Z A;  2YVS A;  2IPI A;  2VFR A;  3RJA A;  1MBB A;  2W3R A;  3FW9 A;  3S1C A;  1HSK A;  1I19 A;  2VFV A;  3AN1 A;  3ETR B;  5HMR A;  5D79 A;  2R8D A;  1AHZ A;  3VTE A;  2VAO A;  4XLO A;  1VDV A;  1N62 C;  4PWC A;  2Y08 A;  2VFU A;  4JAY A;  3POP A;  2RK5 A;  2NQW A;  1DIQ A;  1N63 C;  1WVE A;  2Y3S A;  2O3G A;  1E8G A;  3EUB 3;  5AE2 A;  1AHV A;  3FWA A;  1E0Y A;  4PVK A;  1RM6 B;  5L6G A;  4JB1 A;  5G5G B;  2PLI A;  2I0K A;  3TSH A;  3LAE A;  1N60 C;  3BW7 A;  2E3T A;  3GSY A;  4PVE A;  4PWB A;  4PZF A;  5FXE A;  4ZOH B;  5HHZ A;  3NVZ B;  1W1Q A;  1WYG A;  5I1V A;  2GQU A;  3NRZ B;  5K8E A;  1DII A;  3S1D A;  3W8X A;  3NVY B;  2Q85 A;  2VFS A;  2BVF A;  1SB3 B;  5G5H B;  1JRO A;  1W1K A;  1F0X A;  3D2H A;  1W1S A;  3D2J A;  1DZN A;  3KJM A;  1QLT A;  1FIQ B;  1V97 A;  2QKN A;  5L6F A;  2P4P A;  3LLB A;  3SR6 B;  4PVH A;  2PLS A;  3NS1 B;  2W55 A;  4OAL A;  4EC3 A;  2W3S A;  1W1L A;  3S1E A;  3W8W A;  4MLA A;  3DED A;  4BBY A;  3HRD C;  5ADZ A;  2BVH A;  3TSJ A;  3AM9 A;  1E8H A;  2QPM A;  2W54 A;  3W8Z A;  1N5W C;  3NVW B;  3RJ8 A;  2MBR A;  1VAO A;  1QLU A;  2BVG A;  2WDW A;  1WVF A;  4PYT A;  1FO4 A;  3C0P A; 
#chains in the Genus database with same CATH topology
 3D2D A;  3DQ0 A;  4UD8 A;  3B9J B;  3FW7 A;  4BCA A;  1W1M A;  3FW8 A;  1T3Q C;  3TX1 A;  1N5X A;  1W1R A;  3EJD B;  2EXR A;  1MBT A;  1W1O A;  3NVV B;  5FXD A;  1UXY A;  5FXP A;  2OAI A;  2AXR A;  1ZR6 A;  2Q4W A;  3I99 A;  4PVJ A;  2P13 A;  1AHU A;  3JS8 A;  5AWV A;  4ML8 A;  1N61 C;  1ZXI C;  2GQT A;  3PQB A;  4DNS A;  1FFU C;  3PM9 A;  1FFV C;  5AE1 A;  2Y3R A;  3AMZ A;  4BC7 A;  4HG0 A;  2Y4G A;  5I1W A;  5HQX A;  1W1J A;  2P3H A;  3HSU A;  2VFT A;  4BC9 A;  3S1F A;  4O95 A;  5FXF A;  5AE3 A;  1E8F A;  1JRP A;  2IPI A;  2R2Z A;  2YVS A;  2VFR A;  3RJA A;  1MBB A;  2W3R A;  3FW9 A;  3S1C A;  1HSK A;  1I19 A;  2VFV A;  3AN1 A;  3ETR B;  5HMR A;  5D79 A;  2R8D A;  1AHZ A;  3VTE A;  2VAO A;  4XLO A;  1VDV A;  1N62 C;  4PWC A;  2Y08 A;  2VFU A;  4JAY A;  3POP A;  2RK5 A;  2UUV A;  2NQW A;  1DIQ A;  1N63 C;  1WVE A;  2Y3S A;  2O3G A;  1E8G A;  3EUB 3;  5AE2 A;  1AHV A;  3FWA A;  1E0Y A;  4PVK A;  3EJE B;  1RM6 B;  5L6G A;  4JB1 A;  5G5G B;  2PLI A;  2I0K A;  3TSH A;  3LAE A;  1N60 C;  3BW7 A;  2E3T A;  3GSY A;  4PVE A;  4PWB A;  4PZF A;  5FXE A;  4ZOH B;  5HHZ A;  3NVZ B;  1W1Q A;  1WYG A;  5I1V A;  2GQU A;  3NRZ B;  5K8E A;  1DII A;  3NVY B;  3S1D A;  3W8X A;  2Q85 A;  2VFS A;  2BVF A;  1SB3 B;  5G5H B;  1JRO A;  1W1K A;  1F0X A;  3D2H A;  1W1S A;  3D2J A;  1DZN A;  3KJM A;  3EJB B;  1QLT A;  1FIQ B;  1V97 A;  2QKN A;  5L6F A;  2P4P A;  3LLB A;  3SR6 B;  4PVH A;  2PLS A;  3NS1 B;  2W55 A;  4OAL A;  4EC3 A;  2W3S A;  2UUU A;  1W1L A;  3S1E A;  3W8W A;  4MLA A;  3DED A;  4BBY A;  3HRD C;  5ADZ A;  2BVH A;  3TSJ A;  3AM9 A;  1E8H A;  2QPM A;  2W54 A;  3W8Z A;  1N5W C;  3NVW B;  3RJ8 A;  2MBR A;  1VAO A;  1QLU A;  2BVG A;  2WDW A;  1WVF A;  4PYT A;  1FO4 A;  3C0P A; 
#chains in the Genus database with same CATH homology
 3D2D A;  3DQ0 A;  4UD8 A;  3B9J B;  3FW7 A;  4BCA A;  1W1M A;  3FW8 A;  1T3Q C;  3TX1 A;  1N5X A;  1W1R A;  2EXR A;  1MBT A;  1W1O A;  3NVV B;  5FXD A;  1UXY A;  5FXP A;  2OAI A;  2AXR A;  1ZR6 A;  2Q4W A;  3I99 A;  4PVJ A;  2P13 A;  1AHU A;  3JS8 A;  5AWV A;  4ML8 A;  1N61 C;  1ZXI C;  2GQT A;  3PQB A;  4DNS A;  1FFU C;  3PM9 A;  1FFV C;  5AE1 A;  2Y3R A;  3AMZ A;  4BC7 A;  4HG0 A;  2Y4G A;  5I1W A;  5HQX A;  1W1J A;  2P3H A;  3HSU A;  2VFT A;  4BC9 A;  3S1F A;  4O95 A;  5FXF A;  5AE3 A;  1E8F A;  1JRP A;  2IPI A;  2R2Z A;  2YVS A;  2VFR A;  3RJA A;  1MBB A;  2W3R A;  3FW9 A;  3S1C A;  1HSK A;  1I19 A;  2VFV A;  3AN1 A;  3ETR B;  5HMR A;  5D79 A;  2R8D A;  1AHZ A;  3VTE A;  2VAO A;  4XLO A;  1VDV A;  1N62 C;  4PWC A;  2Y08 A;  2VFU A;  4JAY A;  3POP A;  2RK5 A;  2UUV A;  2NQW A;  1DIQ A;  1N63 C;  1WVE A;  2Y3S A;  2O3G A;  1E8G A;  3EUB 3;  5AE2 A;  1AHV A;  3FWA A;  1E0Y A;  4PVK A;  1RM6 B;  5L6G A;  4JB1 A;  5G5G B;  2PLI A;  2I0K A;  3TSH A;  3LAE A;  1N60 C;  3BW7 A;  2E3T A;  3GSY A;  4PVE A;  4PWB A;  4PZF A;  5FXE A;  4ZOH B;  5HHZ A;  3NVZ B;  1W1Q A;  1WYG A;  5I1V A;  2GQU A;  3NRZ B;  5K8E A;  1DII A;  3S1D A;  3W8X A;  3NVY B;  2Q85 A;  2VFS A;  2BVF A;  1SB3 B;  5G5H B;  1JRO A;  1W1K A;  1F0X A;  3D2H A;  1W1S A;  3D2J A;  1DZN A;  3KJM A;  1QLT A;  1FIQ B;  1V97 A;  2QKN A;  5L6F A;  2P4P A;  3LLB A;  3SR6 B;  4PVH A;  2PLS A;  3NS1 B;  2W55 A;  4OAL A;  4EC3 A;  2W3S A;  2UUU A;  1W1L A;  3S1E A;  3W8W A;  4MLA A;  3DED A;  4BBY A;  3HRD C;  5ADZ A;  2BVH A;  3TSJ A;  3AM9 A;  1E8H A;  2QPM A;  2W54 A;  3W8Z A;  1N5W C;  3NVW B;  3RJ8 A;  2MBR A;  1VAO A;  1QLU A;  2BVG A;  2WDW A;  1WVF A;  4PYT A;  1FO4 A;  3C0P A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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