3W8WA

The crystal structure of encm
Total Genus 138
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
138
sequence length
460
structure length
460
Chain Sequence
QFPQLDPATLAAFSAAFRGELIWPSDADYDEARRIWNGTIDRRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSIKVSRRLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGLVLGGGFGWLSRKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVRGGGGNFGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLPYRALQAYSFPGAVVPDRIYTKSGYLNELSDEATDTVLEHAADIASPFTQLELLYLGGAVARVPDDATAYPNRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALAGHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLFRLNQNIPP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
pubmed doi rcsb
source organism Streptomyces maritimus
molecule tags Oxidoreductase
molecule keywords Putative FAD-dependent oxygenase EncM
total genus 138
structure length 460
sequence length 460
chains with identical sequence B
ec nomenclature ec 1.13.12.-:
pdb deposition date 2013-03-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3w8wA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3w8wA02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3w8wA03
3NVYB 4PWCA 3AN1A 3LLBA 4PVHA 4UD8A 1W1OA 3W8ZA 5D79A 2QKNA 4ML8A 2VFTA 3ETRB 2Y4GA 4ZOHB 2AXRA 3BW7A 1N63C 2W3SA 3RJ8A 1E0YA 1ZXIC 3JS8A 1E8GA 2VFSA 4DNSA 3POPA 2YVSA 2NQWA 3HRDC 1W1JA 2RK5A 2O3GA 3KJMA 2OAIA 3FWAA 2I0KA 3PQBA 1W1LA 1I19A 4PVKA 1FIQB 5I1VA 5K8EA 4HG0A 4XLOA 2PLSA 1N61C 3W8WA 2IPIA 5HQXA 5G5GB 1E8FA 3DQ0A 1AHZA 1AHVA 3B9JB 5AE3A 3GSYA 3HSUA 4JB1A 1W1SA 1WVEA 2Y3SA 4PZFA 1T3QC 1VDVA 1W1KA 3S1FA 2Q85A 5FXEA 5ADZA 3NVWB 1V97A 2BVGA 3NVZB 3I99A 5HMRA 1FFVC 3NS1B 3TX1A 1WVFA 1N60C 2W55A 3W8XA 5I1WA 5L6GA 1QLTA 1SB3B 2P4PA 1AHUA 4PYTA 3RJAA 5AWVA 2MBRA 1W1QA 3NRZB 4BC7A 3D2DA 4JAYA 3FW7A 4PVJA 4EC3A 1DZNA 1RM6B 2P3HA 4MLAA 1N62C 1W1RA 2P13A 2R2ZA 3D2HA 1MBTA 2BVHA 1WYGA 1QLUA 2VFRA 2Q4WA 5FXFA 1E8HA 1FO4A 2GQTA 3DEDA 5FXPA 2VFUA 1N5XA 2PLIA 2VFVA 1JROA 3PM9A 5L6FA 4PVEA 3SR6B 1HSKA 2BVFA 1DIQA 2WDWA 3VTEA 3AM9A 1W1MA 2QPMA 3EUB3 2VAOA 4OALA 3D2JA 2GQUA 5AE2A 5AE1A 2W3RA 5HHZA 3S1CA 1N5WC 1VAOA 3TSHA 4BBYA 1JRPA 3C0PA 3NVVB 3FW8A 4PWBA 1UXYA 5FXDA 1DIIA 3S1DA 2EXRA 4O95A 2W54A 2Y08A 2Y3RA 4BC9A 2E3TA 3S1EA 5G5HB 1F0XA 1MBBA 3TSJA 2R8DA 1FFUC 3FW9A 3LAEA 4BCAA 3AMZA 1ZR6A
chains in the Genus database with same CATH superfamily
3NVYB 4PWCA 3AN1A 3LLBA 4PVHA 4UD8A 1W1OA 2UUUA 3W8ZA 5D79A 2QKNA 4ML8A 2VFTA 3ETRB 2Y4GA 4ZOHB 2AXRA 3BW7A 1N63C 2W3SA 3RJ8A 1E0YA 1ZXIC 3JS8A 1E8GA 2VFSA 4DNSA 3POPA 2YVSA 2NQWA 3HRDC 1W1JA 2RK5A 2O3GA 3KJMA 3EJDB 3FWAA 2OAIA 2I0KA 3PQBA 1W1LA 1I19A 4PVKA 1FIQB 5I1VA 5K8EA 4HG0A 4XLOA 2IPIA 1N61C 3W8WA 2PLSA 5HQXA 5G5GB 1E8FA 3DQ0A 1AHZA 1AHVA 3B9JB 5AE3A 3GSYA 3HSUA 4JB1A 1W1SA 1WVEA 2Y3SA 4PZFA 1T3QC 1VDVA 1W1KA 3NVWB 2Q85A 5FXEA 3S1FA 5ADZA 1V97A 2BVGA 3NVZB 3I99A 5HMRA 1FFVC 3NS1B 3TX1A 1WVFA 1N60C 2W55A 3W8XA 5I1WA 5L6GA 1QLTA 1SB3B 2P4PA 1AHUA 4PYTA 3RJAA 5AWVA 2MBRA 3EJEB 1W1QA 3NRZB 4BC7A 3D2DA 4JAYA 3FW7A 4PVJA 4EC3A 1DZNA 1RM6B 2P3HA 4MLAA 1N62C 1W1RA 2P13A 2R2ZA 3D2HA 3EJBB 1MBTA 2BVHA 1WYGA 1QLUA 2VFRA 2Q4WA 5FXFA 1E8HA 1FO4A 2GQTA 3DEDA 5FXPA 2VFUA 1N5XA 2PLIA 2VFVA 1JROA 3PM9A 5L6FA 4PVEA 3SR6B 1HSKA 2BVFA 1DIQA 2WDWA 3VTEA 3AM9A 1W1MA 2QPMA 3EUB3 2VAOA 4OALA 3D2JA 2GQUA 5AE2A 5AE1A 2W3RA 5HHZA 3S1CA 1N5WC 1VAOA 3TSHA 4BBYA 1JRPA 3C0PA 3NVVB 3FW8A 4PWBA 1UXYA 5FXDA 1DIIA 3S1DA 2EXRA 4O95A 2W54A 2UUVA 2Y08A 2Y3RA 4BC9A 2E3TA 3S1EA 5G5HB 1F0XA 1MBBA 3TSJA 2R8DA 1FFUC 3FW9A 3LAEA 4BCAA 3AMZA 1ZR6A
chains in the Genus database with same CATH topology
3NVYB 4PWCA 3AN1A 3LLBA 4PVHA 4UD8A 1W1OA 2UUUA 3W8ZA 5D79A 2QKNA 4ML8A 2VFTA 3ETRB 2Y4GA 4ZOHB 2AXRA 3BW7A 1N63C 2W3SA 3RJ8A 1E0YA 1ZXIC 3JS8A 1E8GA 2VFSA 4DNSA 3POPA 2YVSA 2NQWA 3HRDC 1W1JA 2RK5A 2O3GA 3KJMA 2OAIA 3FWAA 2I0KA 3PQBA 1W1LA 1I19A 4PVKA 1FIQB 5I1VA 5K8EA 4HG0A 4XLOA 2IPIA 1N61C 3W8WA 2PLSA 5HQXA 5G5GB 1E8FA 3DQ0A 1AHZA 1AHVA 3B9JB 5AE3A 3GSYA 3HSUA 4JB1A 1W1SA 1WVEA 2Y3SA 4PZFA 1T3QC 1VDVA 1W1KA 3S1FA 2Q85A 5FXEA 5ADZA 3NVWB 1V97A 2BVGA 3NVZB 3I99A 5HMRA 1FFVC 3NS1B 3TX1A 1WVFA 1N60C 2W55A 3W8XA 5I1WA 5L6GA 1QLTA 1SB3B 2P4PA 1AHUA 4PYTA 3RJAA 5AWVA 2MBRA 1W1QA 3NRZB 4BC7A 3D2DA 4JAYA 3FW7A 4PVJA 4EC3A 1DZNA 1RM6B 2P3HA 4MLAA 1N62C 1W1RA 2P13A 2R2ZA 3D2HA 1MBTA 2BVHA 1WYGA 1QLUA 2VFRA 2Q4WA 5FXFA 1E8HA 1FO4A 2GQTA 3DEDA 5FXPA 2VFUA 1N5XA 2PLIA 2VFVA 1JROA 3PM9A 5L6FA 4PVEA 3SR6B 1HSKA 2BVFA 1DIQA 2WDWA 3VTEA 3AM9A 1W1MA 2QPMA 3EUB3 2VAOA 4OALA 3D2JA 2GQUA 5AE2A 5AE1A 2W3RA 5HHZA 3S1CA 1N5WC 1VAOA 3TSHA 4BBYA 1JRPA 3C0PA 3NVVB 3FW8A 4PWBA 1UXYA 5FXDA 1DIIA 3S1DA 2EXRA 4O95A 2W54A 2UUVA 2Y08A 2Y3RA 4BC9A 2E3TA 3S1EA 5G5HB 1F0XA 1MBBA 3TSJA 2R8DA 1FFUC 3FW9A 3LAEA 4BCAA 3AMZA 1ZR6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3NVY B;  4PWC A;  3AN1 A;  3LLB A;  4PVH A;  4UD8 A;  1W1O A;  3W8Z A;  5D79 A;  2QKN A;  4ML8 A;  2VFT A;  3ETR B;  2Y4G A;  4ZOH B;  2AXR A;  3BW7 A;  1N63 C;  2W3S A;  3RJ8 A;  1E0Y A;  1ZXI C;  3JS8 A;  1E8G A;  2VFS A;  4DNS A;  3POP A;  2YVS A;  2NQW A;  3HRD C;  1W1J A;  2RK5 A;  2O3G A;  3KJM A;  2OAI A;  3FWA A;  2I0K A;  3PQB A;  1W1L A;  1I19 A;  4PVK A;  1FIQ B;  5I1V A;  5K8E A;  4HG0 A;  4XLO A;  2PLS A;  1N61 C;  3W8W A;  2IPI A;  5HQX A;  5G5G B;  1E8F A;  3DQ0 A;  1AHZ A;  1AHV A;  3B9J B;  5AE3 A;  3GSY A;  3HSU A;  4JB1 A;  1W1S A;  1WVE A;  2Y3S A;  4PZF A;  1T3Q C;  1VDV A;  1W1K A;  3S1F A;  2Q85 A;  5FXE A;  5ADZ A;  3NVW B;  1V97 A;  2BVG A;  3NVZ B;  3I99 A;  5HMR A;  1FFV C;  3NS1 B;  3TX1 A;  1WVF A;  1N60 C;  2W55 A;  3W8X A;  5I1W A;  5L6G A;  1QLT A;  1SB3 B;  2P4P A;  1AHU A;  4PYT A;  3RJA A;  5AWV A;  2MBR A;  1W1Q A;  3NRZ B;  4BC7 A;  3D2D A;  4JAY A;  3FW7 A;  4PVJ A;  4EC3 A;  1DZN A;  1RM6 B;  2P3H A;  4MLA A;  1N62 C;  1W1R A;  2P13 A;  2R2Z A;  3D2H A;  1MBT A;  2BVH A;  1WYG A;  1QLU A;  2VFR A;  2Q4W A;  5FXF A;  1E8H A;  1FO4 A;  2GQT A;  3DED A;  5FXP A;  2VFU A;  1N5X A;  2PLI A;  2VFV A;  1JRO A;  3PM9 A;  5L6F A;  4PVE A;  3SR6 B;  1HSK A;  2BVF A;  1DIQ A;  2WDW A;  3VTE A;  3AM9 A;  1W1M A;  2QPM A;  3EUB 3;  2VAO A;  4OAL A;  3D2J A;  2GQU A;  5AE2 A;  5AE1 A;  2W3R A;  5HHZ A;  3S1C A;  1N5W C;  1VAO A;  3TSH A;  4BBY A;  1JRP A;  3C0P A;  3NVV B;  3FW8 A;  4PWB A;  1UXY A;  5FXD A;  1DII A;  3S1D A;  2EXR A;  4O95 A;  2W54 A;  2Y08 A;  2Y3R A;  4BC9 A;  2E3T A;  3S1E A;  5G5H B;  1F0X A;  1MBB A;  3TSJ A;  2R8D A;  1FFU C;  3FW9 A;  3LAE A;  4BCA A;  3AMZ A;  1ZR6 A; 
#chains in the Genus database with same CATH topology
 3NVY B;  4PWC A;  3AN1 A;  3LLB A;  4PVH A;  4UD8 A;  1W1O A;  2UUU A;  3W8Z A;  5D79 A;  2QKN A;  4ML8 A;  2VFT A;  3ETR B;  2Y4G A;  4ZOH B;  2AXR A;  3BW7 A;  1N63 C;  2W3S A;  3RJ8 A;  1E0Y A;  1ZXI C;  3JS8 A;  1E8G A;  2VFS A;  4DNS A;  3POP A;  2YVS A;  2NQW A;  3HRD C;  1W1J A;  2RK5 A;  2O3G A;  3KJM A;  3EJD B;  3FWA A;  2OAI A;  2I0K A;  3PQB A;  1W1L A;  1I19 A;  4PVK A;  1FIQ B;  5I1V A;  5K8E A;  4HG0 A;  4XLO A;  2IPI A;  1N61 C;  3W8W A;  2PLS A;  5HQX A;  5G5G B;  1E8F A;  3DQ0 A;  1AHZ A;  1AHV A;  3B9J B;  5AE3 A;  3GSY A;  3HSU A;  4JB1 A;  1W1S A;  1WVE A;  2Y3S A;  4PZF A;  1T3Q C;  1VDV A;  1W1K A;  3NVW B;  2Q85 A;  5FXE A;  3S1F A;  5ADZ A;  1V97 A;  2BVG A;  3NVZ B;  3I99 A;  5HMR A;  1FFV C;  3NS1 B;  3TX1 A;  1WVF A;  1N60 C;  2W55 A;  3W8X A;  5I1W A;  5L6G A;  1QLT A;  1SB3 B;  2P4P A;  1AHU A;  4PYT A;  3RJA A;  5AWV A;  2MBR A;  3EJE B;  1W1Q A;  3NRZ B;  4BC7 A;  3D2D A;  4JAY A;  3FW7 A;  4PVJ A;  4EC3 A;  1DZN A;  1RM6 B;  2P3H A;  4MLA A;  1N62 C;  1W1R A;  2P13 A;  2R2Z A;  3D2H A;  3EJB B;  1MBT A;  2BVH A;  1WYG A;  1QLU A;  2VFR A;  2Q4W A;  5FXF A;  1E8H A;  1FO4 A;  2GQT A;  3DED A;  5FXP A;  2VFU A;  1N5X A;  2PLI A;  2VFV A;  1JRO A;  3PM9 A;  5L6F A;  4PVE A;  3SR6 B;  1HSK A;  2BVF A;  1DIQ A;  2WDW A;  3VTE A;  3AM9 A;  1W1M A;  2QPM A;  3EUB 3;  2VAO A;  4OAL A;  3D2J A;  2GQU A;  5AE2 A;  5AE1 A;  2W3R A;  5HHZ A;  3S1C A;  1N5W C;  1VAO A;  3TSH A;  4BBY A;  1JRP A;  3C0P A;  3NVV B;  3FW8 A;  4PWB A;  1UXY A;  5FXD A;  1DII A;  3S1D A;  2EXR A;  4O95 A;  2W54 A;  2UUV A;  2Y08 A;  2Y3R A;  4BC9 A;  2E3T A;  3S1E A;  5G5H B;  1F0X A;  1MBB A;  3TSJ A;  2R8D A;  1FFU C;  3FW9 A;  3LAE A;  4BCA A;  3AMZ A;  1ZR6 A; 
#chains in the Genus database with same CATH homology
 3NVY B;  4PWC A;  3AN1 A;  3LLB A;  4PVH A;  4UD8 A;  1W1O A;  2UUU A;  3W8Z A;  5D79 A;  2QKN A;  4ML8 A;  2VFT A;  3ETR B;  2Y4G A;  4ZOH B;  2AXR A;  3BW7 A;  1N63 C;  2W3S A;  3RJ8 A;  1E0Y A;  1ZXI C;  3JS8 A;  1E8G A;  2VFS A;  4DNS A;  3POP A;  2YVS A;  2NQW A;  3HRD C;  1W1J A;  2RK5 A;  2O3G A;  3KJM A;  2OAI A;  3FWA A;  2I0K A;  3PQB A;  1W1L A;  1I19 A;  4PVK A;  1FIQ B;  5I1V A;  5K8E A;  4HG0 A;  4XLO A;  2IPI A;  1N61 C;  3W8W A;  2PLS A;  5HQX A;  5G5G B;  1E8F A;  3DQ0 A;  1AHZ A;  1AHV A;  3B9J B;  5AE3 A;  3GSY A;  3HSU A;  4JB1 A;  1W1S A;  1WVE A;  2Y3S A;  4PZF A;  1T3Q C;  1VDV A;  1W1K A;  3S1F A;  2Q85 A;  5FXE A;  5ADZ A;  3NVW B;  1V97 A;  2BVG A;  3NVZ B;  3I99 A;  5HMR A;  1FFV C;  3NS1 B;  3TX1 A;  1WVF A;  1N60 C;  2W55 A;  3W8X A;  5I1W A;  5L6G A;  1QLT A;  1SB3 B;  2P4P A;  1AHU A;  4PYT A;  3RJA A;  5AWV A;  2MBR A;  1W1Q A;  3NRZ B;  4BC7 A;  3D2D A;  4JAY A;  3FW7 A;  4PVJ A;  4EC3 A;  1DZN A;  1RM6 B;  2P3H A;  4MLA A;  1N62 C;  1W1R A;  2P13 A;  2R2Z A;  3D2H A;  1MBT A;  2BVH A;  1WYG A;  1QLU A;  2VFR A;  2Q4W A;  5FXF A;  1E8H A;  1FO4 A;  2GQT A;  3DED A;  5FXP A;  2VFU A;  1N5X A;  2PLI A;  2VFV A;  1JRO A;  3PM9 A;  5L6F A;  4PVE A;  3SR6 B;  1HSK A;  2BVF A;  1DIQ A;  2WDW A;  3VTE A;  3AM9 A;  1W1M A;  2QPM A;  3EUB 3;  2VAO A;  4OAL A;  3D2J A;  2GQU A;  5AE2 A;  5AE1 A;  2W3R A;  5HHZ A;  3S1C A;  1N5W C;  1VAO A;  3TSH A;  4BBY A;  1JRP A;  3C0P A;  3NVV B;  3FW8 A;  4PWB A;  1UXY A;  5FXD A;  1DII A;  3S1D A;  2EXR A;  4O95 A;  2W54 A;  2UUV A;  2Y08 A;  2Y3R A;  4BC9 A;  2E3T A;  3S1E A;  5G5H B;  1F0X A;  1MBB A;  3TSJ A;  2R8D A;  1FFU C;  3FW9 A;  3LAE A;  4BCA A;  3AMZ A;  1ZR6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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