3VTEA

Crystal structure of tetrahydrocannabinolic acid synthase from cannabis sativa
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
518
structure length
502
Chain Sequence
ANPRENFLKCFSKHIPNPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQNIAYKYDKDLVLMTHFITKNITTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWIDTTIFYSGVVNFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISESAIPFPHRAGIMYELWYTASWEKQEDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPPHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
source organism Cannabis sativa
publication title Structure and function of 1-tetrahydrocannabinolic acid (THCA) synthase, the enzyme controlling the psychoactivity of Cannabis sativa
pubmed doi rcsb
molecule keywords Tetrahydrocannabinolic acid synthase
total genus 159
structure length 502
sequence length 518
ec nomenclature ec 1.21.3.7: Tetrahydrocannabinolic acid synthase.
pdb deposition date 2012-05-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3vteA01
3.30.465.50 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3vteA02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3vteA03
3D2HA 5AE1A 3AMZA 3POPA 3FWAA 2VFVA 5AWVA 4DNSA 4PWBA 3C0PA 3FW8A 4MLAA 1FFUC 3W8ZA 2GQTA 5I1WA 5L6FA 1E0YA 2W3SA 3BW7A 2I0KA 4PWCA 4BC9A 3HSUA 1DZNA 1AHZA 1N61C 1HSKA 2MBRA 4ML8A 4OALA 1AHVA 3RJ8A 4BBYA 1VAOA 3TX1A 5HMRA 3S1FA 5HQXA 4O95A 2Y4GA 2W54A 5FXDA 1N5WC 5D79A 1VDVA 4PVJA 1E8GA 3JS8A 4EC3A 4PZFA 3I99A 3NRZB 2W3RA 2Y08A 3DQ0A 3ETRB 1W1QA 4PVHA 3AM9A 1WVFA 2VAOA 3AN1A 1W1KA 3TSHA 5AE3A 3W8WA 1N62C 3D2DA 1JROA 2VFTA 2QKNA 2BVHA 5HHZA 5I1VA 2VFRA 1N63C 1T3QC 2QPMA 3GSYA 2Q4WA 3NVZB 3FW9A 2Y3SA 1QLUA 1W1JA 3D2JA 1E8FA 2GQUA 1UXYA 3TSJA 4XLOA 4BC7A 3RJAA 1AHUA 1MBBA 4JAYA 5FXPA 1WVEA 1E8HA 2Y3RA 1DIIA 1W1OA 3FW7A 5ADZA 2BVFA 5FXEA 1I19A 3S1CA 5K8EA 1N5XA 3B9JB 4ZOHB 2EXRA 1V97A 3SR6B 1F0XA 4BCAA 1W1SA 1ZXIC 3VTEA 2IPIA 4JB1A 3W8XA 3S1DA 1W1MA 3NS1B 1WYGA 2VFSA 3KJMA 1DIQA 5FXFA 2WDWA 2Q85A 5AE2A 3PM9A 5L6GA 1MBTA 3EUB3 3S1EA 4UD8A 2W55A 4PYTA 4PVKA 2E3TA 2AXRA 1FIQB 1N60C 1FO4A 4PVEA 2VFUA 1FFVC 1ZR6A 1QLTA 1W1LA 3PQBA 1W1RA 2BVGA
chains in the Genus database with same CATH superfamily
3D2HA 5AE1A 3AMZA 3POPA 3FWAA 2VFVA 5AWVA 2P4PA 4DNSA 4PWBA 3C0PA 2PLIA 3FW8A 4MLAA 1FFUC 3W8ZA 2RK5A 2GQTA 2PLSA 2O3GA 5I1WA 5L6FA 1E0YA 2W3SA 1RM6B 3BW7A 2I0KA 4PWCA 4BC9A 3HSUA 1DZNA 1AHZA 1N61C 1HSKA 2MBRA 4ML8A 4OALA 1AHVA 3RJ8A 4BBYA 1VAOA 3TX1A 5HMRA 3S1FA 5HQXA 4O95A 2Y4GA 2W54A 2R2ZA 5FXDA 2YVSA 1N5WC 3NVVB 5D79A 1VDVA 4PVJA 1E8GA 3JS8A 4EC3A 4PZFA 3I99A 3NRZB 2W3RA 3NVYB 2Y08A 3DQ0A 1SB3B 3ETRB 2UUVA 1W1QA 4PVHA 5G5GB 3AM9A 1WVFA 2VAOA 3AN1A 1W1KA 3TSHA 5AE3A 3W8WA 1N62C 3D2DA 1JROA 2P13A 2VFTA 2QKNA 2BVHA 5HHZA 5I1VA 2VFRA 1N63C 1T3QC 2QPMA 3GSYA 2Q4WA 3NVZB 3FW9A 2Y3SA 1QLUA 1W1JA 3D2JA 2OAIA 1E8FA 2GQUA 1UXYA 3TSJA 4XLOA 4BC7A 3RJAA 1AHUA 1MBBA 4JAYA 5FXPA 1WVEA 1E8HA 2Y3RA 1DIIA 1W1OA 3FW7A 5ADZA 2BVFA 5FXEA 1I19A 3LLBA 3S1CA 5K8EA 2UUUA 1N5XA 3B9JB 4ZOHB 2EXRA 1V97A 3DEDA 2P3HA 3SR6B 3EJEB 1F0XA 4BCAA 1W1SA 1ZXIC 3VTEA 2IPIA 4JB1A 1JRPA 3W8XA 3S1DA 1W1MA 3NS1B 1WYGA 5G5HB 2VFSA 3HRDC 3KJMA 1DIQA 5FXFA 2WDWA 2Q85A 3EJDB 5AE2A 3PM9A 5L6GA 1MBTA 3EUB3 3S1EA 4UD8A 3LAEA 2W55A 4PYTA 2R8DA 4PVKA 2E3TA 2NQWA 2AXRA 1FIQB 1N60C 1FO4A 3NVWB 4PVEA 2VFUA 1FFVC 1ZR6A 1QLTA 1W1LA 3PQBA 1W1RA 4HG0A 2BVGA 3EJBB
chains in the Genus database with same CATH topology
3D2HA 5AE1A 3AMZA 3POPA 3FWAA 2VFVA 5AWVA 2P4PA 4DNSA 4PWBA 3C0PA 2PLIA 3FW8A 4MLAA 1FFUC 3W8ZA 2RK5A 2GQTA 2PLSA 2O3GA 5I1WA 5L6FA 1E0YA 2W3SA 1RM6B 3BW7A 2I0KA 4PWCA 4BC9A 3HSUA 1DZNA 1AHZA 1N61C 1HSKA 2MBRA 4ML8A 4OALA 1AHVA 3RJ8A 4BBYA 1VAOA 3TX1A 5HMRA 3S1FA 5HQXA 4O95A 2Y4GA 2W54A 2R2ZA 5FXDA 2YVSA 1N5WC 3NVVB 5D79A 1VDVA 4PVJA 1E8GA 3JS8A 4EC3A 4PZFA 3I99A 3NRZB 2W3RA 2Y08A 3NVYB 3DQ0A 1SB3B 3ETRB 2UUVA 1W1QA 4PVHA 5G5GB 3AM9A 1WVFA 2VAOA 3AN1A 1W1KA 3TSHA 5AE3A 3W8WA 1N62C 3D2DA 1JROA 2P13A 2VFTA 2QKNA 2BVHA 5HHZA 5I1VA 2VFRA 1N63C 1T3QC 2QPMA 3GSYA 2Q4WA 3NVZB 3FW9A 2Y3SA 1QLUA 1W1JA 3D2JA 2OAIA 1E8FA 2GQUA 1UXYA 3TSJA 4XLOA 4BC7A 3RJAA 1AHUA 1MBBA 4JAYA 5FXPA 1WVEA 1E8HA 2Y3RA 1DIIA 1W1OA 3FW7A 5ADZA 2BVFA 5FXEA 1I19A 3LLBA 3S1CA 5K8EA 2UUUA 1N5XA 3B9JB 4ZOHB 2EXRA 1V97A 3DEDA 2P3HA 3SR6B 1F0XA 4BCAA 1W1SA 1ZXIC 3VTEA 2IPIA 4JB1A 1JRPA 3W8XA 3S1DA 1W1MA 3NS1B 1WYGA 5G5HB 2VFSA 3HRDC 3KJMA 1DIQA 5FXFA 2WDWA 2Q85A 5AE2A 3PM9A 5L6GA 1MBTA 3EUB3 3S1EA 4UD8A 3LAEA 2W55A 4PYTA 2R8DA 4PVKA 2E3TA 2NQWA 2AXRA 1FIQB 1N60C 1FO4A 4PVEA 3NVWB 2VFUA 1FFVC 1ZR6A 1QLTA 1W1LA 3PQBA 1W1RA 4HG0A 2BVGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3D2H A;  5AE1 A;  3AMZ A;  3POP A;  3FWA A;  2VFV A;  5AWV A;  4DNS A;  4PWB A;  3C0P A;  3FW8 A;  4MLA A;  1FFU C;  3W8Z A;  2GQT A;  5I1W A;  5L6F A;  1E0Y A;  2W3S A;  3BW7 A;  2I0K A;  4PWC A;  4BC9 A;  3HSU A;  1DZN A;  1AHZ A;  1N61 C;  1HSK A;  2MBR A;  4ML8 A;  4OAL A;  1AHV A;  3RJ8 A;  4BBY A;  1VAO A;  3TX1 A;  5HMR A;  3S1F A;  5HQX A;  4O95 A;  2Y4G A;  2W54 A;  5FXD A;  1N5W C;  5D79 A;  1VDV A;  4PVJ A;  1E8G A;  3JS8 A;  4EC3 A;  4PZF A;  3I99 A;  3NRZ B;  2W3R A;  2Y08 A;  3DQ0 A;  3ETR B;  1W1Q A;  4PVH A;  3AM9 A;  1WVF A;  2VAO A;  3AN1 A;  1W1K A;  3TSH A;  5AE3 A;  3W8W A;  1N62 C;  3D2D A;  1JRO A;  2VFT A;  2QKN A;  2BVH A;  5HHZ A;  5I1V A;  2VFR A;  1N63 C;  1T3Q C;  2QPM A;  3GSY A;  2Q4W A;  3NVZ B;  3FW9 A;  2Y3S A;  1QLU A;  1W1J A;  3D2J A;  1E8F A;  2GQU A;  1UXY A;  3TSJ A;  4XLO A;  4BC7 A;  3RJA A;  1AHU A;  1MBB A;  4JAY A;  5FXP A;  1WVE A;  1E8H A;  2Y3R A;  1DII A;  1W1O A;  3FW7 A;  5ADZ A;  2BVF A;  5FXE A;  1I19 A;  3S1C A;  5K8E A;  1N5X A;  3B9J B;  4ZOH B;  2EXR A;  1V97 A;  3SR6 B;  1F0X A;  4BCA A;  1W1S A;  1ZXI C;  3VTE A;  2IPI A;  4JB1 A;  3W8X A;  3S1D A;  1W1M A;  3NS1 B;  1WYG A;  2VFS A;  3KJM A;  1DIQ A;  5FXF A;  2WDW A;  2Q85 A;  5AE2 A;  3PM9 A;  5L6G A;  1MBT A;  3EUB 3;  3S1E A;  4UD8 A;  2W55 A;  4PYT A;  4PVK A;  2E3T A;  2AXR A;  1FIQ B;  1N60 C;  1FO4 A;  4PVE A;  2VFU A;  1FFV C;  1ZR6 A;  1QLT A;  1W1L A;  3PQB A;  1W1R A;  2BVG A; 
#chains in the Genus database with same CATH topology
 3D2H A;  5AE1 A;  3AMZ A;  3POP A;  3FWA A;  2VFV A;  5AWV A;  2P4P A;  4DNS A;  4PWB A;  3C0P A;  2PLI A;  3FW8 A;  4MLA A;  1FFU C;  3W8Z A;  2RK5 A;  2GQT A;  2PLS A;  2O3G A;  5I1W A;  5L6F A;  1E0Y A;  2W3S A;  1RM6 B;  3BW7 A;  2I0K A;  4PWC A;  4BC9 A;  3HSU A;  1DZN A;  1AHZ A;  1N61 C;  1HSK A;  2MBR A;  4ML8 A;  4OAL A;  1AHV A;  3RJ8 A;  4BBY A;  1VAO A;  3TX1 A;  5HMR A;  3S1F A;  5HQX A;  4O95 A;  2Y4G A;  2W54 A;  2R2Z A;  5FXD A;  2YVS A;  1N5W C;  3NVV B;  5D79 A;  1VDV A;  4PVJ A;  1E8G A;  3JS8 A;  4EC3 A;  4PZF A;  3I99 A;  3NRZ B;  2W3R A;  3NVY B;  2Y08 A;  3DQ0 A;  1SB3 B;  3ETR B;  2UUV A;  1W1Q A;  4PVH A;  5G5G B;  3AM9 A;  1WVF A;  2VAO A;  3AN1 A;  1W1K A;  3TSH A;  5AE3 A;  3W8W A;  1N62 C;  3D2D A;  1JRO A;  2P13 A;  2VFT A;  2QKN A;  2BVH A;  5HHZ A;  5I1V A;  2VFR A;  1N63 C;  1T3Q C;  2QPM A;  3GSY A;  2Q4W A;  3NVZ B;  3FW9 A;  2Y3S A;  1QLU A;  1W1J A;  3D2J A;  2OAI A;  1E8F A;  2GQU A;  1UXY A;  3TSJ A;  4XLO A;  4BC7 A;  3RJA A;  1AHU A;  1MBB A;  4JAY A;  5FXP A;  1WVE A;  1E8H A;  2Y3R A;  1DII A;  1W1O A;  3FW7 A;  5ADZ A;  2BVF A;  5FXE A;  1I19 A;  3LLB A;  3S1C A;  5K8E A;  2UUU A;  1N5X A;  3B9J B;  4ZOH B;  2EXR A;  1V97 A;  3DED A;  2P3H A;  3SR6 B;  3EJE B;  1F0X A;  4BCA A;  1W1S A;  1ZXI C;  3VTE A;  2IPI A;  4JB1 A;  1JRP A;  3W8X A;  3S1D A;  1W1M A;  3NS1 B;  1WYG A;  5G5H B;  2VFS A;  3HRD C;  3KJM A;  1DIQ A;  5FXF A;  2WDW A;  2Q85 A;  3EJD B;  5AE2 A;  3PM9 A;  5L6G A;  1MBT A;  3EUB 3;  3S1E A;  4UD8 A;  3LAE A;  2W55 A;  4PYT A;  2R8D A;  4PVK A;  2E3T A;  2NQW A;  2AXR A;  1FIQ B;  1N60 C;  1FO4 A;  3NVW B;  4PVE A;  2VFU A;  1FFV C;  1ZR6 A;  1QLT A;  1W1L A;  3PQB A;  1W1R A;  4HG0 A;  2BVG A;  3EJB B; 
#chains in the Genus database with same CATH homology
 3D2H A;  5AE1 A;  3AMZ A;  3POP A;  3FWA A;  2VFV A;  5AWV A;  2P4P A;  4DNS A;  4PWB A;  3C0P A;  2PLI A;  3FW8 A;  4MLA A;  1FFU C;  3W8Z A;  2RK5 A;  2GQT A;  2PLS A;  2O3G A;  5I1W A;  5L6F A;  1E0Y A;  2W3S A;  1RM6 B;  3BW7 A;  2I0K A;  4PWC A;  4BC9 A;  3HSU A;  1DZN A;  1AHZ A;  1N61 C;  1HSK A;  2MBR A;  4ML8 A;  4OAL A;  1AHV A;  3RJ8 A;  4BBY A;  1VAO A;  3TX1 A;  5HMR A;  3S1F A;  5HQX A;  4O95 A;  2Y4G A;  2W54 A;  2R2Z A;  5FXD A;  2YVS A;  1N5W C;  3NVV B;  5D79 A;  1VDV A;  4PVJ A;  1E8G A;  3JS8 A;  4EC3 A;  4PZF A;  3I99 A;  3NRZ B;  2W3R A;  2Y08 A;  3NVY B;  3DQ0 A;  1SB3 B;  3ETR B;  2UUV A;  1W1Q A;  4PVH A;  5G5G B;  3AM9 A;  1WVF A;  2VAO A;  3AN1 A;  1W1K A;  3TSH A;  5AE3 A;  3W8W A;  1N62 C;  3D2D A;  1JRO A;  2P13 A;  2VFT A;  2QKN A;  2BVH A;  5HHZ A;  5I1V A;  2VFR A;  1N63 C;  1T3Q C;  2QPM A;  3GSY A;  2Q4W A;  3NVZ B;  3FW9 A;  2Y3S A;  1QLU A;  1W1J A;  3D2J A;  2OAI A;  1E8F A;  2GQU A;  1UXY A;  3TSJ A;  4XLO A;  4BC7 A;  3RJA A;  1AHU A;  1MBB A;  4JAY A;  5FXP A;  1WVE A;  1E8H A;  2Y3R A;  1DII A;  1W1O A;  3FW7 A;  5ADZ A;  2BVF A;  5FXE A;  1I19 A;  3LLB A;  3S1C A;  5K8E A;  2UUU A;  1N5X A;  3B9J B;  4ZOH B;  2EXR A;  1V97 A;  3DED A;  2P3H A;  3SR6 B;  1F0X A;  4BCA A;  1W1S A;  1ZXI C;  3VTE A;  2IPI A;  4JB1 A;  1JRP A;  3W8X A;  3S1D A;  1W1M A;  3NS1 B;  1WYG A;  5G5H B;  2VFS A;  3HRD C;  3KJM A;  1DIQ A;  5FXF A;  2WDW A;  2Q85 A;  5AE2 A;  3PM9 A;  5L6G A;  1MBT A;  3EUB 3;  3S1E A;  4UD8 A;  3LAE A;  2W55 A;  4PYT A;  2R8D A;  4PVK A;  2E3T A;  2NQW A;  2AXR A;  1FIQ B;  1N60 C;  1FO4 A;  4PVE A;  3NVW B;  2VFU A;  1FFV C;  1ZR6 A;  1QLT A;  1W1L A;  3PQB A;  1W1R A;  4HG0 A;  2BVG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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