3S1EA

Pro427gln mutant of maize cytokinin oxidase/dehydrogenase complexed with n6-isopentenyladenine
Total Genus 170
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
170
sequence length
503
structure length
499
Chain Sequence
RPWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTADLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRLVYTDFAAFSADQERLTAPRPASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGQLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Cytokinin dehydrogenase 1
publication title Kinetic and structural investigation of the cytokinin oxidase/dehydrogenase active site.
pubmed doi rcsb
source organism Zea mays
total genus 170
structure length 499
sequence length 503
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3s1eA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3s1eA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 3s1eA03
1DIIA 3D2JA 2GQTA 2BVGA 3W8XA 3LAEA 2R2ZA 3NVWB 4PVJA 1N62C 4PYTA 3S1CA 2P4PA 3KJMA 5G5HB 2YVSA 4ML8A 4OALA 2GQUA 2VFVA 2P13A 1DZNA 1F0XA 2E3TA 1W1SA 3FW7A 1FIQB 3W8ZA 2I0KA 5FXFA 2EXRA 2PLIA 1MBTA 3W8WA 2NQWA 1E0YA 1VAOA 3S1DA 1AHZA 3AN1A 1HSKA 1JRPA 1N63C 3C0PA 1QLTA 3DQ0A 2RK5A 2W3SA 2O3GA 2PLSA 2R8DA 3ETRB 2AXRA 1E8FA 1T3QC 1ZR6A 5FXEA 1W1RA 3S1EA 3JS8A 4PWBA 4BCAA 4BBYA 3TSHA 2W55A 2BVFA 2VFSA 3FW8A 3S1FA 3TSJA 4PWCA 3NS1B 4PVHA 1JROA 3DEDA 4UD8A 2W54A 4EC3A 5FXPA 2P3HA 5HMRA 4DNSA 1MBBA 2VFUA 3NVVB 1W1LA 3FWAA 4ZOHB 3TX1A 3I99A 4MLAA 4BC9A 5HQXA 1UXYA 1N60C 1W1JA 4O95A 1W1OA 1WVFA 3EUB3 5ADZA 3GSYA 1V97A 3NRZB 5AE2A 4JAYA 1WYGA 2OAIA 1VDVA 2Q85A 3AM9A 3B9JB 5D79A 1FFUC 1N5WC 1FO4A 5HHZA 3NVZB 1RM6B 1I19A 2Q4WA 2VFRA 1AHUA 3LLBA 2QKNA 2VFTA 3D2HA 4PVKA 5AE3A 1SB3B 1ZXIC 3D2DA 1N61C 1DIQA 2VAOA 5G5GB 3BW7A 1E8HA 2W3RA 4PVEA 1WVEA 5FXDA 3AMZA 3SR6B 2MBRA 1E8GA 1W1QA 3PM9A 4XLOA 3HRDC 3FW9A 3VTEA 1AHVA 1FFVC 1QLUA 2QPMA 1W1MA 4BC7A 1W1KA 4JB1A 4PZFA 3NVYB 4HG0A 1N5XA 5AE1A 2BVHA
chains in the Genus database with same CATH superfamily
1DIIA 3D2JA 2GQTA 2IPIA 5AWVA 2BVGA 5K8EA 2Y4GA 3W8XA 3LAEA 3NVWB 2R2ZA 4PVJA 1N62C 3PQBA 4PYTA 3S1CA 2P4PA 3EJEB 2Y3SA 3KJMA 5G5HB 2YVSA 4ML8A 4OALA 2GQUA 2VFVA 2P13A 1DZNA 1F0XA 2E3TA 1W1SA 3FW7A 1FIQB 3W8ZA 2I0KA 5FXFA 2EXRA 2PLIA 1MBTA 3W8WA 2NQWA 1E0YA 1VAOA 3S1DA 1AHZA 3AN1A 3RJ8A 1HSKA 1JRPA 1N63C 3C0PA 1QLTA 3DQ0A 2RK5A 2W3SA 2O3GA 2PLSA 2R8DA 3ETRB 2AXRA 1E8FA 1T3QC 1ZR6A 5FXEA 1W1RA 3S1EA 3JS8A 4PWBA 4BCAA 5I1WA 4BBYA 3TSHA 2W55A 2BVFA 2VFSA 3FW8A 3S1FA 3TSJA 4PWCA 3NS1B 4PVHA 1JROA 2Y08A 3DEDA 4UD8A 2W54A 3EJDB 4EC3A 5FXPA 2P3HA 5HMRA 4DNSA 1MBBA 2VFUA 3NVVB 1W1LA 3FWAA 4ZOHB 3TX1A 3I99A 4MLAA 4BC9A 5HQXA 1UXYA 1N60C 1W1JA 4O95A 5I1VA 1W1OA 1WVFA 3EUB3 5ADZA 3GSYA 1V97A 3NRZB 5AE2A 4JAYA 1WYGA 5L6GA 2OAIA 1VDVA 2Q85A 3AM9A 3B9JB 5D79A 2WDWA 1FFUC 1N5WC 1FO4A 5HHZA 3NVZB 1RM6B 5L6FA 1I19A 2Q4WA 2VFRA 3HSUA 1AHUA 3LLBA 2QKNA 2VFTA 3D2HA 4PVKA 5AE3A 1SB3B 3POPA 1ZXIC 3D2DA 1N61C 1DIQA 2VAOA 2UUUA 3BW7A 5G5GB 1E8HA 2W3RA 4PVEA 1WVEA 5FXDA 3AMZA 3SR6B 2MBRA 1E8GA 1W1QA 3PM9A 4XLOA 3HRDC 2Y3RA 3FW9A 3VTEA 1AHVA 1FFVC 1QLUA 2QPMA 1W1MA 4BC7A 1W1KA 4JB1A 4PZFA 3NVYB 3EJBB 2UUVA 4HG0A 3RJAA 1N5XA 5AE1A 2BVHA
chains in the Genus database with same CATH topology
1DIIA 3D2JA 2GQTA 2IPIA 5AWVA 2BVGA 5K8EA 2Y4GA 3W8XA 3LAEA 2R2ZA 3NVWB 4PVJA 1N62C 3PQBA 4PYTA 3S1CA 2P4PA 2Y3SA 3KJMA 5G5HB 2YVSA 4ML8A 4OALA 2GQUA 2VFVA 2P13A 1DZNA 1F0XA 2E3TA 1W1SA 3FW7A 1FIQB 3W8ZA 2I0KA 5FXFA 2EXRA 2PLIA 1MBTA 3W8WA 2NQWA 1E0YA 1VAOA 3S1DA 1AHZA 3AN1A 3RJ8A 1HSKA 1JRPA 1N63C 3C0PA 1QLTA 3DQ0A 2RK5A 2W3SA 2O3GA 2PLSA 2R8DA 3ETRB 2AXRA 1E8FA 1T3QC 1ZR6A 5FXEA 1W1RA 3S1EA 3JS8A 4PWBA 4BCAA 5I1WA 4BBYA 3TSHA 2W55A 2BVFA 2VFSA 3FW8A 3S1FA 3TSJA 4PWCA 3NS1B 4PVHA 1JROA 2Y08A 3DEDA 4UD8A 2W54A 4EC3A 5FXPA 2P3HA 5HMRA 4DNSA 1MBBA 2VFUA 3NVVB 1W1LA 3FWAA 4ZOHB 3TX1A 3I99A 4MLAA 4BC9A 5HQXA 1UXYA 1N60C 1W1JA 4O95A 5I1VA 1W1OA 1WVFA 3EUB3 5ADZA 3GSYA 1V97A 3NRZB 5AE2A 4JAYA 1WYGA 5L6GA 2OAIA 1VDVA 2Q85A 3AM9A 3B9JB 5D79A 2WDWA 1FFUC 1N5WC 1FO4A 5HHZA 3NVZB 1RM6B 5L6FA 1I19A 2Q4WA 2VFRA 3HSUA 1AHUA 3LLBA 2QKNA 2VFTA 3D2HA 4PVKA 5AE3A 1SB3B 3POPA 1ZXIC 3D2DA 1N61C 1DIQA 2VAOA 2UUUA 3BW7A 5G5GB 1E8HA 2W3RA 4PVEA 1WVEA 5FXDA 3AMZA 3SR6B 2MBRA 1E8GA 1W1QA 3PM9A 4XLOA 3HRDC 2Y3RA 3FW9A 3VTEA 1AHVA 1FFVC 1QLUA 2QPMA 1W1MA 4BC7A 1W1KA 4JB1A 4PZFA 3NVYB 2UUVA 4HG0A 3RJAA 1N5XA 5AE1A 2BVHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1DII A;  3D2J A;  2GQT A;  2BVG A;  3W8X A;  3LAE A;  2R2Z A;  3NVW B;  4PVJ A;  1N62 C;  4PYT A;  3S1C A;  2P4P A;  3KJM A;  5G5H B;  2YVS A;  4ML8 A;  4OAL A;  2GQU A;  2VFV A;  2P13 A;  1DZN A;  1F0X A;  2E3T A;  1W1S A;  3FW7 A;  1FIQ B;  3W8Z A;  2I0K A;  5FXF A;  2EXR A;  2PLI A;  1MBT A;  3W8W A;  2NQW A;  1E0Y A;  1VAO A;  3S1D A;  1AHZ A;  3AN1 A;  1HSK A;  1JRP A;  1N63 C;  3C0P A;  1QLT A;  3DQ0 A;  2RK5 A;  2W3S A;  2O3G A;  2PLS A;  2R8D A;  3ETR B;  2AXR A;  1E8F A;  1T3Q C;  1ZR6 A;  5FXE A;  1W1R A;  3S1E A;  3JS8 A;  4PWB A;  4BCA A;  4BBY A;  3TSH A;  2W55 A;  2BVF A;  2VFS A;  3FW8 A;  3S1F A;  3TSJ A;  4PWC A;  3NS1 B;  4PVH A;  1JRO A;  3DED A;  4UD8 A;  2W54 A;  4EC3 A;  5FXP A;  2P3H A;  5HMR A;  4DNS A;  1MBB A;  2VFU A;  3NVV B;  1W1L A;  3FWA A;  4ZOH B;  3TX1 A;  3I99 A;  4MLA A;  4BC9 A;  5HQX A;  1UXY A;  1N60 C;  1W1J A;  4O95 A;  1W1O A;  1WVF A;  3EUB 3;  5ADZ A;  3GSY A;  1V97 A;  3NRZ B;  5AE2 A;  4JAY A;  1WYG A;  2OAI A;  1VDV A;  2Q85 A;  3AM9 A;  3B9J B;  5D79 A;  1FFU C;  1N5W C;  1FO4 A;  5HHZ A;  3NVZ B;  1RM6 B;  1I19 A;  2Q4W A;  2VFR A;  1AHU A;  3LLB A;  2QKN A;  2VFT A;  3D2H A;  4PVK A;  5AE3 A;  1SB3 B;  1ZXI C;  3D2D A;  1N61 C;  1DIQ A;  2VAO A;  5G5G B;  3BW7 A;  1E8H A;  2W3R A;  4PVE A;  1WVE A;  5FXD A;  3AMZ A;  3SR6 B;  2MBR A;  1E8G A;  1W1Q A;  3PM9 A;  4XLO A;  3HRD C;  3FW9 A;  3VTE A;  1AHV A;  1FFV C;  1QLU A;  2QPM A;  1W1M A;  4BC7 A;  1W1K A;  4JB1 A;  4PZF A;  3NVY B;  4HG0 A;  1N5X A;  5AE1 A;  2BVH A; 
#chains in the Genus database with same CATH topology
 1DII A;  3D2J A;  2GQT A;  2IPI A;  5AWV A;  2BVG A;  5K8E A;  2Y4G A;  3W8X A;  3LAE A;  3NVW B;  2R2Z A;  4PVJ A;  1N62 C;  3PQB A;  4PYT A;  3S1C A;  2P4P A;  3EJE B;  2Y3S A;  3KJM A;  5G5H B;  2YVS A;  4ML8 A;  4OAL A;  2GQU A;  2VFV A;  2P13 A;  1DZN A;  1F0X A;  2E3T A;  1W1S A;  3FW7 A;  1FIQ B;  3W8Z A;  2I0K A;  5FXF A;  2EXR A;  2PLI A;  1MBT A;  3W8W A;  2NQW A;  1E0Y A;  1VAO A;  3S1D A;  1AHZ A;  3AN1 A;  3RJ8 A;  1HSK A;  1JRP A;  1N63 C;  3C0P A;  1QLT A;  3DQ0 A;  2RK5 A;  2W3S A;  2O3G A;  2PLS A;  2R8D A;  3ETR B;  2AXR A;  1E8F A;  1T3Q C;  1ZR6 A;  5FXE A;  1W1R A;  3S1E A;  3JS8 A;  4PWB A;  4BCA A;  5I1W A;  4BBY A;  3TSH A;  2W55 A;  2BVF A;  2VFS A;  3FW8 A;  3S1F A;  3TSJ A;  4PWC A;  3NS1 B;  4PVH A;  1JRO A;  2Y08 A;  3DED A;  4UD8 A;  2W54 A;  3EJD B;  4EC3 A;  5FXP A;  2P3H A;  5HMR A;  4DNS A;  1MBB A;  2VFU A;  3NVV B;  1W1L A;  3FWA A;  4ZOH B;  3TX1 A;  3I99 A;  4MLA A;  4BC9 A;  5HQX A;  1UXY A;  1N60 C;  1W1J A;  4O95 A;  5I1V A;  1W1O A;  1WVF A;  3EUB 3;  5ADZ A;  3GSY A;  1V97 A;  3NRZ B;  5AE2 A;  4JAY A;  1WYG A;  5L6G A;  2OAI A;  1VDV A;  2Q85 A;  3AM9 A;  3B9J B;  5D79 A;  2WDW A;  1FFU C;  1N5W C;  1FO4 A;  5HHZ A;  3NVZ B;  1RM6 B;  5L6F A;  1I19 A;  2Q4W A;  2VFR A;  3HSU A;  1AHU A;  3LLB A;  2QKN A;  2VFT A;  3D2H A;  4PVK A;  5AE3 A;  1SB3 B;  3POP A;  1ZXI C;  3D2D A;  1N61 C;  1DIQ A;  2VAO A;  2UUU A;  3BW7 A;  5G5G B;  1E8H A;  2W3R A;  4PVE A;  1WVE A;  5FXD A;  3AMZ A;  3SR6 B;  2MBR A;  1E8G A;  1W1Q A;  3PM9 A;  4XLO A;  3HRD C;  2Y3R A;  3FW9 A;  3VTE A;  1AHV A;  1FFV C;  1QLU A;  2QPM A;  1W1M A;  4BC7 A;  1W1K A;  4JB1 A;  4PZF A;  3NVY B;  3EJB B;  2UUV A;  4HG0 A;  3RJA A;  1N5X A;  5AE1 A;  2BVH A; 
#chains in the Genus database with same CATH homology
 1DII A;  3D2J A;  2GQT A;  2IPI A;  5AWV A;  2BVG A;  5K8E A;  2Y4G A;  3W8X A;  3LAE A;  2R2Z A;  3NVW B;  4PVJ A;  1N62 C;  3PQB A;  4PYT A;  3S1C A;  2P4P A;  2Y3S A;  3KJM A;  5G5H B;  2YVS A;  4ML8 A;  4OAL A;  2GQU A;  2VFV A;  2P13 A;  1DZN A;  1F0X A;  2E3T A;  1W1S A;  3FW7 A;  1FIQ B;  3W8Z A;  2I0K A;  5FXF A;  2EXR A;  2PLI A;  1MBT A;  3W8W A;  2NQW A;  1E0Y A;  1VAO A;  3S1D A;  1AHZ A;  3AN1 A;  3RJ8 A;  1HSK A;  1JRP A;  1N63 C;  3C0P A;  1QLT A;  3DQ0 A;  2RK5 A;  2W3S A;  2O3G A;  2PLS A;  2R8D A;  3ETR B;  2AXR A;  1E8F A;  1T3Q C;  1ZR6 A;  5FXE A;  1W1R A;  3S1E A;  3JS8 A;  4PWB A;  4BCA A;  5I1W A;  4BBY A;  3TSH A;  2W55 A;  2BVF A;  2VFS A;  3FW8 A;  3S1F A;  3TSJ A;  4PWC A;  3NS1 B;  4PVH A;  1JRO A;  2Y08 A;  3DED A;  4UD8 A;  2W54 A;  4EC3 A;  5FXP A;  2P3H A;  5HMR A;  4DNS A;  1MBB A;  2VFU A;  3NVV B;  1W1L A;  3FWA A;  4ZOH B;  3TX1 A;  3I99 A;  4MLA A;  4BC9 A;  5HQX A;  1UXY A;  1N60 C;  1W1J A;  4O95 A;  5I1V A;  1W1O A;  1WVF A;  3EUB 3;  5ADZ A;  3GSY A;  1V97 A;  3NRZ B;  5AE2 A;  4JAY A;  1WYG A;  5L6G A;  2OAI A;  1VDV A;  2Q85 A;  3AM9 A;  3B9J B;  5D79 A;  2WDW A;  1FFU C;  1N5W C;  1FO4 A;  5HHZ A;  3NVZ B;  1RM6 B;  5L6F A;  1I19 A;  2Q4W A;  2VFR A;  3HSU A;  1AHU A;  3LLB A;  2QKN A;  2VFT A;  3D2H A;  4PVK A;  5AE3 A;  1SB3 B;  3POP A;  1ZXI C;  3D2D A;  1N61 C;  1DIQ A;  2VAO A;  2UUU A;  3BW7 A;  5G5G B;  1E8H A;  2W3R A;  4PVE A;  1WVE A;  5FXD A;  3AMZ A;  3SR6 B;  2MBR A;  1E8G A;  1W1Q A;  3PM9 A;  4XLO A;  3HRD C;  2Y3R A;  3FW9 A;  3VTE A;  1AHV A;  1FFV C;  1QLU A;  2QPM A;  1W1M A;  4BC7 A;  1W1K A;  4JB1 A;  4PZF A;  3NVY B;  2UUV A;  4HG0 A;  3RJA A;  1N5X A;  5AE1 A;  2BVH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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