3S1EA

Pro427gln mutant of maize cytokinin oxidase/dehydrogenase complexed with n6-isopentenyladenine
Total Genus 170
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
170
sequence length
503
structure length
499
Chain Sequence
RPWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTADLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRLVYTDFAAFSADQERLTAPRPASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGQLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Cytokinin dehydrogenase 1
publication title Kinetic and structural investigation of the cytokinin oxidase/dehydrogenase active site.
pubmed doi rcsb
source organism Zea mays
total genus 170
structure length 499
sequence length 503
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2011-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3s1eA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3s1eA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 3s1eA03
2BVHA 2GQTA 1VAOA 2GQUA 5AE1A 1I19A 2QPMA 4BBYA 1MBBA 3B9JB 3D2JA 5HQXA 1N61C 1N62C 3GSYA 5G5GB 1AHZA 1W1RA 4JB1A 3W8XA 1ZXIC 1DIIA 2W3SA 1JROA 3TSHA 1F0XA 2EXRA 4PWBA 1DZNA 4XLOA 5HMRA 1W1QA 5AE2A 1MBTA 1WVFA 1V97A 4PZFA 3I99A 3SR6B 2VFTA 2NQWA 2I0KA 1T3QC 2VFRA 4O95A 4PVJA 2W54A 3S1FA 3TX1A 3FW9A 1W1MA 2RK5A 1AHVA 4ZOHB 3NVYB 3W8ZA 1E0YA 1DIQA 1VDVA 2PLSA 4DNSA 1E8FA 3JS8A 2VAOA 5G5HB 1FIQB 4PWCA 2Q4WA 1N63C 1N5WC 2OAIA 5FXDA 3AN1A 2P13A 2W55A 4OALA 3NVZB 1WVEA 1W1OA 3AMZA 1QLTA 1E8HA 3FW7A 1UXYA 2BVFA 5AE3A 4ML8A 3S1EA 1RM6B 4JAYA 2P3HA 5D79A 2VFUA 3DQ0A 1N5XA 4BC7A 3C0PA 3NRZB 3LLBA 1W1JA 2YVSA 1N60C 4HG0A 5ADZA 2QKNA 1JRPA 1E8GA 1FO4A 4PVEA 3FWAA 1HSKA 1W1LA 4PYTA 3S1CA 3AM9A 1ZR6A 3KJMA 1W1KA 3EUB3 3D2DA 4EC3A 5FXEA 3DEDA 3ETRB 2P4PA 1AHUA 1SB3B 3NVWB 3NS1B 4BCAA 1WYGA 4UD8A 2AXRA 1FFUC 2R2ZA 3LAEA 3TSJA 2O3GA 4PVKA 5HHZA 2BVGA 1QLUA 4BC9A 2VFSA 5FXPA 1W1SA 3FW8A 2MBRA 1FFVC 4MLAA 2PLIA 2VFVA 3HRDC 3NVVB 3W8WA 4PVHA 5FXFA 3VTEA 2Q85A 2E3TA 3D2HA 3S1DA 2W3RA 3PM9A 2R8DA 3BW7A
chains in the Genus database with same CATH superfamily
2BVHA 2GQTA 1VAOA 2GQUA 5AE1A 1I19A 2QPMA 4BBYA 1MBBA 3B9JB 3D2JA 5HQXA 1N61C 1N62C 3GSYA 5G5GB 1AHZA 3HSUA 1W1RA 4JB1A 3W8XA 1ZXIC 1DIIA 2W3SA 1JROA 3TSHA 2IPIA 1F0XA 2EXRA 4PWBA 1DZNA 4XLOA 5HMRA 1W1QA 2Y08A 5AE2A 1MBTA 1WVFA 1V97A 3EJDB 3I99A 4PZFA 3SR6B 2VFTA 2NQWA 2I0KA 1T3QC 2VFRA 4O95A 4PVJA 3RJAA 2W54A 3S1FA 3TX1A 3PQBA 3FW9A 1W1MA 2RK5A 1AHVA 4ZOHB 5K8EA 3NVYB 3W8ZA 1E0YA 1DIQA 1VDVA 2PLSA 4DNSA 1E8FA 3JS8A 5L6GA 2VAOA 5G5HB 1FIQB 4PWCA 2Q4WA 1N63C 2Y4GA 1N5WC 2OAIA 5FXDA 3AN1A 2P13A 2W55A 4OALA 3NVZB 1WVEA 1W1OA 3AMZA 1QLTA 1E8HA 3FW7A 2UUUA 1UXYA 2BVFA 5AE3A 4ML8A 3S1EA 1RM6B 4JAYA 2P3HA 5D79A 2VFUA 3DQ0A 1N5XA 4BC7A 3C0PA 3NRZB 3LLBA 1W1JA 2YVSA 1N60C 4HG0A 5ADZA 2QKNA 1JRPA 1E8GA 1FO4A 4PVEA 3FWAA 1HSKA 1W1LA 4PYTA 3S1CA 3AM9A 3EJEB 2UUVA 1ZR6A 3EJBB 2WDWA 3KJMA 2Y3SA 1W1KA 5I1WA 3EUB3 3D2DA 4EC3A 5FXEA 3DEDA 3ETRB 2P4PA 1AHUA 3NVWB 1SB3B 3NS1B 4BCAA 1WYGA 4UD8A 2AXRA 1FFUC 2R2ZA 3LAEA 3TSJA 2O3GA 4PVKA 3RJ8A 5HHZA 2BVGA 1QLUA 4BC9A 2Y3RA 2VFSA 5L6FA 5FXPA 1W1SA 3FW8A 2MBRA 1FFVC 4MLAA 2PLIA 2VFVA 3HRDC 3POPA 3NVVB 3W8WA 4PVHA 5FXFA 3VTEA 2Q85A 2E3TA 3D2HA 3S1DA 2W3RA 5AWVA 3PM9A 2R8DA 5I1VA 3BW7A
chains in the Genus database with same CATH topology
2BVHA 2GQTA 1VAOA 2GQUA 5AE1A 1I19A 2QPMA 4BBYA 1MBBA 3B9JB 3D2JA 5HQXA 1N61C 1N62C 3GSYA 5G5GB 1AHZA 3HSUA 1W1RA 4JB1A 3W8XA 1ZXIC 1DIIA 2W3SA 1JROA 3TSHA 2IPIA 1F0XA 2EXRA 4PWBA 1DZNA 4XLOA 5HMRA 1W1QA 2Y08A 5AE2A 1MBTA 1WVFA 1V97A 4PZFA 3I99A 3SR6B 2VFTA 2NQWA 2I0KA 1T3QC 2VFRA 4O95A 4PVJA 3RJAA 2W54A 3S1FA 3TX1A 3PQBA 3FW9A 1W1MA 2RK5A 1AHVA 4ZOHB 5K8EA 3NVYB 3W8ZA 1E0YA 1DIQA 1VDVA 2PLSA 4DNSA 1E8FA 3JS8A 5L6GA 2VAOA 5G5HB 1FIQB 4PWCA 2Q4WA 1N63C 2Y4GA 1N5WC 2OAIA 5FXDA 3AN1A 2P13A 2W55A 4OALA 3NVZB 1WVEA 1W1OA 3AMZA 1QLTA 1E8HA 3FW7A 2UUUA 1UXYA 2BVFA 5AE3A 4ML8A 3S1EA 1RM6B 4JAYA 2P3HA 5D79A 2VFUA 3DQ0A 1N5XA 4BC7A 3C0PA 3NRZB 3LLBA 1W1JA 2YVSA 1N60C 4HG0A 5ADZA 2QKNA 1JRPA 1E8GA 1FO4A 4PVEA 3FWAA 1HSKA 1W1LA 4PYTA 3S1CA 3AM9A 2UUVA 1ZR6A 2WDWA 3KJMA 2Y3SA 1W1KA 5I1WA 3EUB3 3D2DA 4EC3A 5FXEA 3DEDA 3ETRB 2P4PA 1AHUA 1SB3B 3NVWB 3NS1B 4BCAA 1WYGA 4UD8A 2AXRA 1FFUC 2R2ZA 3LAEA 3TSJA 2O3GA 4PVKA 3RJ8A 5HHZA 2BVGA 1QLUA 4BC9A 2Y3RA 2VFSA 5L6FA 5FXPA 1W1SA 3FW8A 2MBRA 1FFVC 4MLAA 2PLIA 2VFVA 3HRDC 3POPA 3NVVB 3W8WA 4PVHA 5FXFA 3VTEA 2Q85A 2E3TA 3D2HA 3S1DA 2W3RA 5AWVA 3PM9A 2R8DA 5I1VA 3BW7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BVH A;  2GQT A;  1VAO A;  2GQU A;  5AE1 A;  1I19 A;  2QPM A;  4BBY A;  1MBB A;  3B9J B;  3D2J A;  5HQX A;  1N61 C;  1N62 C;  3GSY A;  5G5G B;  1AHZ A;  1W1R A;  4JB1 A;  3W8X A;  1ZXI C;  1DII A;  2W3S A;  1JRO A;  3TSH A;  1F0X A;  2EXR A;  4PWB A;  1DZN A;  4XLO A;  5HMR A;  1W1Q A;  5AE2 A;  1MBT A;  1WVF A;  1V97 A;  4PZF A;  3I99 A;  3SR6 B;  2VFT A;  2NQW A;  2I0K A;  1T3Q C;  2VFR A;  4O95 A;  4PVJ A;  2W54 A;  3S1F A;  3TX1 A;  3FW9 A;  1W1M A;  2RK5 A;  1AHV A;  4ZOH B;  3NVY B;  3W8Z A;  1E0Y A;  1DIQ A;  1VDV A;  2PLS A;  4DNS A;  1E8F A;  3JS8 A;  2VAO A;  5G5H B;  1FIQ B;  4PWC A;  2Q4W A;  1N63 C;  1N5W C;  2OAI A;  5FXD A;  3AN1 A;  2P13 A;  2W55 A;  4OAL A;  3NVZ B;  1WVE A;  1W1O A;  3AMZ A;  1QLT A;  1E8H A;  3FW7 A;  1UXY A;  2BVF A;  5AE3 A;  4ML8 A;  3S1E A;  1RM6 B;  4JAY A;  2P3H A;  5D79 A;  2VFU A;  3DQ0 A;  1N5X A;  4BC7 A;  3C0P A;  3NRZ B;  3LLB A;  1W1J A;  2YVS A;  1N60 C;  4HG0 A;  5ADZ A;  2QKN A;  1JRP A;  1E8G A;  1FO4 A;  4PVE A;  3FWA A;  1HSK A;  1W1L A;  4PYT A;  3S1C A;  3AM9 A;  1ZR6 A;  3KJM A;  1W1K A;  3EUB 3;  3D2D A;  4EC3 A;  5FXE A;  3DED A;  3ETR B;  2P4P A;  1AHU A;  1SB3 B;  3NVW B;  3NS1 B;  4BCA A;  1WYG A;  4UD8 A;  2AXR A;  1FFU C;  2R2Z A;  3LAE A;  3TSJ A;  2O3G A;  4PVK A;  5HHZ A;  2BVG A;  1QLU A;  4BC9 A;  2VFS A;  5FXP A;  1W1S A;  3FW8 A;  2MBR A;  1FFV C;  4MLA A;  2PLI A;  2VFV A;  3HRD C;  3NVV B;  3W8W A;  4PVH A;  5FXF A;  3VTE A;  2Q85 A;  2E3T A;  3D2H A;  3S1D A;  2W3R A;  3PM9 A;  2R8D A;  3BW7 A; 
#chains in the Genus database with same CATH topology
 2BVH A;  2GQT A;  1VAO A;  2GQU A;  5AE1 A;  1I19 A;  2QPM A;  4BBY A;  1MBB A;  3B9J B;  3D2J A;  5HQX A;  1N61 C;  1N62 C;  3GSY A;  5G5G B;  1AHZ A;  3HSU A;  1W1R A;  4JB1 A;  3W8X A;  1ZXI C;  1DII A;  2W3S A;  1JRO A;  3TSH A;  2IPI A;  1F0X A;  2EXR A;  4PWB A;  1DZN A;  4XLO A;  5HMR A;  1W1Q A;  2Y08 A;  5AE2 A;  1MBT A;  1WVF A;  1V97 A;  3EJD B;  3I99 A;  4PZF A;  3SR6 B;  2VFT A;  2NQW A;  2I0K A;  1T3Q C;  2VFR A;  4O95 A;  4PVJ A;  3RJA A;  2W54 A;  3S1F A;  3TX1 A;  3PQB A;  3FW9 A;  1W1M A;  2RK5 A;  1AHV A;  4ZOH B;  5K8E A;  3NVY B;  3W8Z A;  1E0Y A;  1DIQ A;  1VDV A;  2PLS A;  4DNS A;  1E8F A;  3JS8 A;  5L6G A;  2VAO A;  5G5H B;  1FIQ B;  4PWC A;  2Q4W A;  1N63 C;  2Y4G A;  1N5W C;  2OAI A;  5FXD A;  3AN1 A;  2P13 A;  2W55 A;  4OAL A;  3NVZ B;  1WVE A;  1W1O A;  3AMZ A;  1QLT A;  1E8H A;  3FW7 A;  2UUU A;  1UXY A;  2BVF A;  5AE3 A;  4ML8 A;  3S1E A;  1RM6 B;  4JAY A;  2P3H A;  5D79 A;  2VFU A;  3DQ0 A;  1N5X A;  4BC7 A;  3C0P A;  3NRZ B;  3LLB A;  1W1J A;  2YVS A;  1N60 C;  4HG0 A;  5ADZ A;  2QKN A;  1JRP A;  1E8G A;  1FO4 A;  4PVE A;  3FWA A;  1HSK A;  1W1L A;  4PYT A;  3S1C A;  3AM9 A;  3EJE B;  2UUV A;  1ZR6 A;  3EJB B;  2WDW A;  3KJM A;  2Y3S A;  1W1K A;  5I1W A;  3EUB 3;  3D2D A;  4EC3 A;  5FXE A;  3DED A;  3ETR B;  2P4P A;  1AHU A;  3NVW B;  1SB3 B;  3NS1 B;  4BCA A;  1WYG A;  4UD8 A;  2AXR A;  1FFU C;  2R2Z A;  3LAE A;  3TSJ A;  2O3G A;  4PVK A;  3RJ8 A;  5HHZ A;  2BVG A;  1QLU A;  4BC9 A;  2Y3R A;  2VFS A;  5L6F A;  5FXP A;  1W1S A;  3FW8 A;  2MBR A;  1FFV C;  4MLA A;  2PLI A;  2VFV A;  3HRD C;  3POP A;  3NVV B;  3W8W A;  4PVH A;  5FXF A;  3VTE A;  2Q85 A;  2E3T A;  3D2H A;  3S1D A;  2W3R A;  5AWV A;  3PM9 A;  2R8D A;  5I1V A;  3BW7 A; 
#chains in the Genus database with same CATH homology
 2BVH A;  2GQT A;  1VAO A;  2GQU A;  5AE1 A;  1I19 A;  2QPM A;  4BBY A;  1MBB A;  3B9J B;  3D2J A;  5HQX A;  1N61 C;  1N62 C;  3GSY A;  5G5G B;  1AHZ A;  3HSU A;  1W1R A;  4JB1 A;  3W8X A;  1ZXI C;  1DII A;  2W3S A;  1JRO A;  3TSH A;  2IPI A;  1F0X A;  2EXR A;  4PWB A;  1DZN A;  4XLO A;  5HMR A;  1W1Q A;  2Y08 A;  5AE2 A;  1MBT A;  1WVF A;  1V97 A;  4PZF A;  3I99 A;  3SR6 B;  2VFT A;  2NQW A;  2I0K A;  1T3Q C;  2VFR A;  4O95 A;  4PVJ A;  3RJA A;  2W54 A;  3S1F A;  3TX1 A;  3PQB A;  3FW9 A;  1W1M A;  2RK5 A;  1AHV A;  4ZOH B;  5K8E A;  3NVY B;  3W8Z A;  1E0Y A;  1DIQ A;  1VDV A;  2PLS A;  4DNS A;  1E8F A;  3JS8 A;  5L6G A;  2VAO A;  5G5H B;  1FIQ B;  4PWC A;  2Q4W A;  1N63 C;  2Y4G A;  1N5W C;  2OAI A;  5FXD A;  3AN1 A;  2P13 A;  2W55 A;  4OAL A;  3NVZ B;  1WVE A;  1W1O A;  3AMZ A;  1QLT A;  1E8H A;  3FW7 A;  2UUU A;  1UXY A;  2BVF A;  5AE3 A;  4ML8 A;  3S1E A;  1RM6 B;  4JAY A;  2P3H A;  5D79 A;  2VFU A;  3DQ0 A;  1N5X A;  4BC7 A;  3C0P A;  3NRZ B;  3LLB A;  1W1J A;  2YVS A;  1N60 C;  4HG0 A;  5ADZ A;  2QKN A;  1JRP A;  1E8G A;  1FO4 A;  4PVE A;  3FWA A;  1HSK A;  1W1L A;  4PYT A;  3S1C A;  3AM9 A;  2UUV A;  1ZR6 A;  2WDW A;  3KJM A;  2Y3S A;  1W1K A;  5I1W A;  3EUB 3;  3D2D A;  4EC3 A;  5FXE A;  3DED A;  3ETR B;  2P4P A;  1AHU A;  1SB3 B;  3NVW B;  3NS1 B;  4BCA A;  1WYG A;  4UD8 A;  2AXR A;  1FFU C;  2R2Z A;  3LAE A;  3TSJ A;  2O3G A;  4PVK A;  3RJ8 A;  5HHZ A;  2BVG A;  1QLU A;  4BC9 A;  2Y3R A;  2VFS A;  5L6F A;  5FXP A;  1W1S A;  3FW8 A;  2MBR A;  1FFV C;  4MLA A;  2PLI A;  2VFV A;  3HRD C;  3POP A;  3NVV B;  3W8W A;  4PVH A;  5FXF A;  3VTE A;  2Q85 A;  2E3T A;  3D2H A;  3S1D A;  2W3R A;  5AWV A;  3PM9 A;  2R8D A;  5I1V A;  3BW7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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