3C0PA

Maize cytokinin oxidase/dehydrogenase complexed with the allenic cytokinin analog ha-8
Total Genus 167
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
167
sequence length
502
structure length
496
Chain Sequence
PWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTADLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRLVYTDFAAFSADQERLTAPRSFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Cytokinin dehydrogenase 1
publication title Mechanism-based inhibitors of cytokinin oxidase/dehydrogenase attack FAD cofactor
pubmed doi rcsb
source organism Zea mays
total genus 167
structure length 496
sequence length 502
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2008-01-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3c0pA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3c0pA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 3c0pA03
1V97A 4JB1A 3HRDC 1AHUA 3LLBA 2I0KA 1W1OA 4PYTA 2GQUA 3FW8A 3D2HA 3NVYB 3I99A 4PVEA 1W1MA 3AM9A 1AHZA 2MBRA 2VFSA 3FW9A 2P3HA 4HG0A 2BVFA 1QLTA 5HQXA 1E8GA 1E8HA 4PVJA 3FW7A 1T3QC 2R2ZA 2EXRA 4EC3A 5G5HB 3EUB3 3TSJA 5G5GB 4PZFA 5AE1A 4BCAA 4PVKA 1FIQB 5FXPA 1N62C 2GQTA 2QKNA 5AE3A 2AXRA 3TSHA 3VTEA 5ADZA 1W1JA 3S1DA 5D79A 1AHVA 1N5XA 3NVZB 2W54A 5FXDA 1SB3B 2BVHA 1N60C 3W8XA 4BBYA 5HMRA 1WVFA 1VAOA 4BC9A 3S1CA 4ZOHB 1I19A 5AE2A 3C0PA 3W8ZA 4PWCA 2VFVA 5FXEA 1WVEA 2BVGA 3AN1A 4MLAA 3AMZA 1JROA 1WYGA 1HSKA 3D2DA 2YVSA 1VDVA 1MBTA 1FFUC 1N61C 3BW7A 3PM9A 4O95A 2W55A 3W8WA 3FWAA 2P13A 2RK5A 3DEDA 4ML8A 2W3RA 1ZXIC 2VAOA 2W3SA 2PLIA 1UXYA 3ETRB 2VFUA 3SR6B 1QLUA 3NRZB 1FFVC 1E8FA 1MBBA 2PLSA 3NVWB 2Q4WA 3JS8A 2NQWA 1N5WC 3S1EA 3TX1A 2Q85A 3GSYA 1RM6B 1W1SA 5FXFA 1W1LA 3DQ0A 1ZR6A 1W1QA 4UD8A 2O3GA 5HHZA 1DIQA 1DZNA 3B9JB 3NVVB 2OAIA 4PVHA 1N63C 4JAYA 1JRPA 1DIIA 1E0YA 3LAEA 4XLOA 1W1KA 2VFRA 4BC7A 2VFTA 4PWBA 3S1FA 2QPMA 1F0XA 3NS1B 2P4PA 2R8DA 2E3TA 1FO4A 4OALA 1W1RA 4DNSA 3D2JA 3KJMA
chains in the Genus database with same CATH superfamily
1V97A 4JB1A 3HRDC 1AHUA 3LLBA 2I0KA 1W1OA 4PYTA 2GQUA 3FW8A 3D2HA 3NVYB 2Y08A 3I99A 4PVEA 1W1MA 3AM9A 1AHZA 2MBRA 2VFSA 3FW9A 2P3HA 4HG0A 2BVFA 1QLTA 5HQXA 2UUUA 1E8GA 1E8HA 4PVJA 3FW7A 3POPA 2Y4GA 1T3QC 2R2ZA 2EXRA 4EC3A 5G5HB 3EUB3 3TSJA 5G5GB 4PZFA 5AE1A 2Y3SA 4BCAA 4PVKA 1FIQB 5FXPA 1N62C 2GQTA 2QKNA 3EJBB 3HSUA 5AE3A 2AXRA 3TSHA 3VTEA 5ADZA 1W1JA 3S1DA 5D79A 1AHVA 1N5XA 3RJ8A 3NVZB 2W54A 5FXDA 1SB3B 2BVHA 1N60C 3W8XA 4BBYA 5HMRA 1WVFA 1VAOA 4BC9A 3S1CA 4ZOHB 5I1WA 1I19A 5AE2A 3C0PA 3W8ZA 3RJAA 4PWCA 2VFVA 5FXEA 1WVEA 2BVGA 3AN1A 4MLAA 3AMZA 1JROA 1WYGA 1HSKA 3D2DA 2YVSA 1VDVA 1MBTA 1FFUC 5I1VA 1N61C 3BW7A 3EJDB 3PM9A 4O95A 5L6FA 2W55A 3W8WA 3FWAA 2P13A 2RK5A 3DEDA 4ML8A 2W3RA 1ZXIC 2VAOA 2W3SA 2PLIA 1UXYA 2WDWA 2Y3RA 3ETRB 2VFUA 3PQBA 2UUVA 3SR6B 1QLUA 3NRZB 1FFVC 1E8FA 1MBBA 2PLSA 3NVWB 2Q4WA 3JS8A 2NQWA 1N5WC 3S1EA 3TX1A 2Q85A 3GSYA 1RM6B 1W1SA 5FXFA 1W1LA 3DQ0A 1ZR6A 1W1QA 3EJEB 4UD8A 2O3GA 5HHZA 1DIQA 1DZNA 3B9JB 3NVVB 2OAIA 4PVHA 1N63C 4JAYA 5K8EA 1JRPA 1DIIA 1E0YA 3LAEA 4XLOA 1W1KA 2VFRA 4BC7A 2VFTA 4PWBA 3S1FA 2IPIA 2QPMA 1F0XA 3NS1B 2P4PA 2R8DA 2E3TA 1FO4A 5L6GA 4OALA 5AWVA 1W1RA 4DNSA 3D2JA 3KJMA
chains in the Genus database with same CATH topology
1V97A 4JB1A 3HRDC 1AHUA 3LLBA 2I0KA 1W1OA 4PYTA 2GQUA 3FW8A 3D2HA 3NVYB 2Y08A 3I99A 4PVEA 1W1MA 3AM9A 1AHZA 2MBRA 2VFSA 3FW9A 2P3HA 4HG0A 2BVFA 1QLTA 5HQXA 2UUUA 1E8GA 1E8HA 4PVJA 3FW7A 3POPA 2Y4GA 1T3QC 2R2ZA 2EXRA 4EC3A 5G5HB 3EUB3 3TSJA 5G5GB 4PZFA 5AE1A 2Y3SA 4BCAA 4PVKA 1FIQB 5FXPA 1N62C 2GQTA 2QKNA 3HSUA 5AE3A 2AXRA 3TSHA 3VTEA 5ADZA 1W1JA 3S1DA 5D79A 1AHVA 1N5XA 3RJ8A 3NVZB 2W54A 5FXDA 1SB3B 2BVHA 1N60C 3W8XA 4BBYA 5HMRA 1WVFA 1VAOA 4BC9A 3S1CA 4ZOHB 5I1WA 1I19A 5AE2A 3C0PA 3W8ZA 3RJAA 4PWCA 2VFVA 5FXEA 1WVEA 2BVGA 3AN1A 4MLAA 3AMZA 1JROA 1WYGA 1HSKA 3D2DA 2YVSA 1VDVA 1MBTA 1FFUC 5I1VA 1N61C 3BW7A 3PM9A 4O95A 5L6FA 2W55A 3W8WA 3FWAA 2P13A 2RK5A 3DEDA 4ML8A 2W3RA 1ZXIC 2VAOA 2W3SA 2PLIA 1UXYA 2WDWA 2Y3RA 3ETRB 2VFUA 3PQBA 2UUVA 3SR6B 1QLUA 3NRZB 1FFVC 1E8FA 1MBBA 2PLSA 3NVWB 2Q4WA 3JS8A 2NQWA 1N5WC 3S1EA 3TX1A 2Q85A 3GSYA 1RM6B 1W1SA 5FXFA 1W1LA 3DQ0A 1ZR6A 1W1QA 4UD8A 2O3GA 5HHZA 1DIQA 1DZNA 3B9JB 3NVVB 2OAIA 4PVHA 1N63C 4JAYA 5K8EA 1JRPA 1DIIA 1E0YA 3LAEA 4XLOA 1W1KA 2VFRA 4BC7A 2VFTA 4PWBA 3S1FA 2IPIA 2QPMA 1F0XA 3NS1B 2P4PA 2R8DA 2E3TA 1FO4A 5L6GA 4OALA 5AWVA 1W1RA 4DNSA 3D2JA 3KJMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1V97 A;  4JB1 A;  3HRD C;  1AHU A;  3LLB A;  2I0K A;  1W1O A;  4PYT A;  2GQU A;  3FW8 A;  3D2H A;  3NVY B;  3I99 A;  4PVE A;  1W1M A;  3AM9 A;  1AHZ A;  2MBR A;  2VFS A;  3FW9 A;  2P3H A;  4HG0 A;  2BVF A;  1QLT A;  5HQX A;  1E8G A;  1E8H A;  4PVJ A;  3FW7 A;  1T3Q C;  2R2Z A;  2EXR A;  4EC3 A;  5G5H B;  3EUB 3;  3TSJ A;  5G5G B;  4PZF A;  5AE1 A;  4BCA A;  4PVK A;  1FIQ B;  5FXP A;  1N62 C;  2GQT A;  2QKN A;  5AE3 A;  2AXR A;  3TSH A;  3VTE A;  5ADZ A;  1W1J A;  3S1D A;  5D79 A;  1AHV A;  1N5X A;  3NVZ B;  2W54 A;  5FXD A;  1SB3 B;  2BVH A;  1N60 C;  3W8X A;  4BBY A;  5HMR A;  1WVF A;  1VAO A;  4BC9 A;  3S1C A;  4ZOH B;  1I19 A;  5AE2 A;  3C0P A;  3W8Z A;  4PWC A;  2VFV A;  5FXE A;  1WVE A;  2BVG A;  3AN1 A;  4MLA A;  3AMZ A;  1JRO A;  1WYG A;  1HSK A;  3D2D A;  2YVS A;  1VDV A;  1MBT A;  1FFU C;  1N61 C;  3BW7 A;  3PM9 A;  4O95 A;  2W55 A;  3W8W A;  3FWA A;  2P13 A;  2RK5 A;  3DED A;  4ML8 A;  2W3R A;  1ZXI C;  2VAO A;  2W3S A;  2PLI A;  1UXY A;  3ETR B;  2VFU A;  3SR6 B;  1QLU A;  3NRZ B;  1FFV C;  1E8F A;  1MBB A;  2PLS A;  3NVW B;  2Q4W A;  3JS8 A;  2NQW A;  1N5W C;  3S1E A;  3TX1 A;  2Q85 A;  3GSY A;  1RM6 B;  1W1S A;  5FXF A;  1W1L A;  3DQ0 A;  1ZR6 A;  1W1Q A;  4UD8 A;  2O3G A;  5HHZ A;  1DIQ A;  1DZN A;  3B9J B;  3NVV B;  2OAI A;  4PVH A;  1N63 C;  4JAY A;  1JRP A;  1DII A;  1E0Y A;  3LAE A;  4XLO A;  1W1K A;  2VFR A;  4BC7 A;  2VFT A;  4PWB A;  3S1F A;  2QPM A;  1F0X A;  3NS1 B;  2P4P A;  2R8D A;  2E3T A;  1FO4 A;  4OAL A;  1W1R A;  4DNS A;  3D2J A;  3KJM A; 
#chains in the Genus database with same CATH topology
 1V97 A;  4JB1 A;  3HRD C;  1AHU A;  3LLB A;  2I0K A;  1W1O A;  4PYT A;  2GQU A;  3FW8 A;  3D2H A;  3NVY B;  2Y08 A;  3I99 A;  4PVE A;  1W1M A;  3AM9 A;  1AHZ A;  2MBR A;  2VFS A;  3FW9 A;  2P3H A;  4HG0 A;  2BVF A;  1QLT A;  5HQX A;  2UUU A;  1E8G A;  1E8H A;  4PVJ A;  3FW7 A;  3POP A;  2Y4G A;  1T3Q C;  2R2Z A;  2EXR A;  4EC3 A;  5G5H B;  3EUB 3;  3TSJ A;  5G5G B;  4PZF A;  5AE1 A;  2Y3S A;  4BCA A;  4PVK A;  1FIQ B;  5FXP A;  1N62 C;  2GQT A;  2QKN A;  3EJB B;  3HSU A;  5AE3 A;  2AXR A;  3TSH A;  3VTE A;  5ADZ A;  1W1J A;  3S1D A;  5D79 A;  1AHV A;  1N5X A;  3RJ8 A;  3NVZ B;  2W54 A;  5FXD A;  1SB3 B;  2BVH A;  1N60 C;  3W8X A;  4BBY A;  5HMR A;  1WVF A;  1VAO A;  4BC9 A;  3S1C A;  4ZOH B;  5I1W A;  1I19 A;  5AE2 A;  3C0P A;  3W8Z A;  3RJA A;  4PWC A;  2VFV A;  5FXE A;  1WVE A;  2BVG A;  3AN1 A;  4MLA A;  3AMZ A;  1JRO A;  1WYG A;  1HSK A;  3D2D A;  2YVS A;  1VDV A;  1MBT A;  1FFU C;  5I1V A;  1N61 C;  3BW7 A;  3EJD B;  3PM9 A;  4O95 A;  5L6F A;  2W55 A;  3W8W A;  3FWA A;  2P13 A;  2RK5 A;  3DED A;  4ML8 A;  2W3R A;  1ZXI C;  2VAO A;  2W3S A;  2PLI A;  1UXY A;  2WDW A;  2Y3R A;  3ETR B;  2VFU A;  3PQB A;  2UUV A;  3SR6 B;  1QLU A;  3NRZ B;  1FFV C;  1E8F A;  1MBB A;  2PLS A;  3NVW B;  2Q4W A;  3JS8 A;  2NQW A;  1N5W C;  3S1E A;  3TX1 A;  2Q85 A;  3GSY A;  1RM6 B;  1W1S A;  5FXF A;  1W1L A;  3DQ0 A;  1ZR6 A;  1W1Q A;  3EJE B;  4UD8 A;  2O3G A;  5HHZ A;  1DIQ A;  1DZN A;  3B9J B;  3NVV B;  2OAI A;  4PVH A;  1N63 C;  4JAY A;  5K8E A;  1JRP A;  1DII A;  1E0Y A;  3LAE A;  4XLO A;  1W1K A;  2VFR A;  4BC7 A;  2VFT A;  4PWB A;  3S1F A;  2IPI A;  2QPM A;  1F0X A;  3NS1 B;  2P4P A;  2R8D A;  2E3T A;  1FO4 A;  5L6G A;  4OAL A;  5AWV A;  1W1R A;  4DNS A;  3D2J A;  3KJM A; 
#chains in the Genus database with same CATH homology
 1V97 A;  4JB1 A;  3HRD C;  1AHU A;  3LLB A;  2I0K A;  1W1O A;  4PYT A;  2GQU A;  3FW8 A;  3D2H A;  3NVY B;  2Y08 A;  3I99 A;  4PVE A;  1W1M A;  3AM9 A;  1AHZ A;  2MBR A;  2VFS A;  3FW9 A;  2P3H A;  4HG0 A;  2BVF A;  1QLT A;  5HQX A;  2UUU A;  1E8G A;  1E8H A;  4PVJ A;  3FW7 A;  3POP A;  2Y4G A;  1T3Q C;  2R2Z A;  2EXR A;  4EC3 A;  5G5H B;  3EUB 3;  3TSJ A;  5G5G B;  4PZF A;  5AE1 A;  2Y3S A;  4BCA A;  4PVK A;  1FIQ B;  5FXP A;  1N62 C;  2GQT A;  2QKN A;  3HSU A;  5AE3 A;  2AXR A;  3TSH A;  3VTE A;  5ADZ A;  1W1J A;  3S1D A;  5D79 A;  1AHV A;  1N5X A;  3RJ8 A;  3NVZ B;  2W54 A;  5FXD A;  1SB3 B;  2BVH A;  1N60 C;  3W8X A;  4BBY A;  5HMR A;  1WVF A;  1VAO A;  4BC9 A;  3S1C A;  4ZOH B;  5I1W A;  1I19 A;  5AE2 A;  3C0P A;  3W8Z A;  3RJA A;  4PWC A;  2VFV A;  5FXE A;  1WVE A;  2BVG A;  3AN1 A;  4MLA A;  3AMZ A;  1JRO A;  1WYG A;  1HSK A;  3D2D A;  2YVS A;  1VDV A;  1MBT A;  1FFU C;  5I1V A;  1N61 C;  3BW7 A;  3PM9 A;  4O95 A;  5L6F A;  2W55 A;  3W8W A;  3FWA A;  2P13 A;  2RK5 A;  3DED A;  4ML8 A;  2W3R A;  1ZXI C;  2VAO A;  2W3S A;  2PLI A;  1UXY A;  2WDW A;  2Y3R A;  3ETR B;  2VFU A;  3PQB A;  2UUV A;  3SR6 B;  1QLU A;  3NRZ B;  1FFV C;  1E8F A;  1MBB A;  2PLS A;  3NVW B;  2Q4W A;  3JS8 A;  2NQW A;  1N5W C;  3S1E A;  3TX1 A;  2Q85 A;  3GSY A;  1RM6 B;  1W1S A;  5FXF A;  1W1L A;  3DQ0 A;  1ZR6 A;  1W1Q A;  4UD8 A;  2O3G A;  5HHZ A;  1DIQ A;  1DZN A;  3B9J B;  3NVV B;  2OAI A;  4PVH A;  1N63 C;  4JAY A;  5K8E A;  1JRP A;  1DII A;  1E0Y A;  3LAE A;  4XLO A;  1W1K A;  2VFR A;  4BC7 A;  2VFT A;  4PWB A;  3S1F A;  2IPI A;  2QPM A;  1F0X A;  3NS1 B;  2P4P A;  2R8D A;  2E3T A;  1FO4 A;  5L6G A;  4OAL A;  5AWV A;  1W1R A;  4DNS A;  3D2J A;  3KJM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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