3C0PA

Maize cytokinin oxidase/dehydrogenase complexed with the allenic cytokinin analog ha-8
Total Genus 167
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
167
sequence length
502
structure length
496
Chain Sequence
PWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTADLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRLVYTDFAAFSADQERLTAPRSFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Cytokinin dehydrogenase 1
publication title Mechanism-based inhibitors of cytokinin oxidase/dehydrogenase attack FAD cofactor
pubmed doi rcsb
source organism Zea mays
total genus 167
structure length 496
sequence length 502
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2008-01-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3c0pA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3c0pA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 3c0pA03
2VFTA 4PWBA 2GQUA 3HRDC 5HHZA 4EC3A 3NVWB 3JS8A 3AN1A 4BC9A 3S1DA 3D2JA 1RM6B 5HQXA 2P13A 1W1KA 1WVEA 2QKNA 3NVVB 2W55A 5FXPA 2VFRA 1N5WC 3FW7A 2Q85A 4PVHA 2R2ZA 5G5GB 3B9JB 1ZR6A 1N60C 4PWCA 5FXDA 5G5HB 5HMRA 4HG0A 1W1OA 3SR6B 3D2DA 2W3RA 3W8ZA 5D79A 3VTEA 4BCAA 1N61C 3NVZB 2E3TA 1WVFA 4PVJA 2VFVA 2NQWA 1W1SA 4PYTA 1F0XA 4OALA 3W8XA 2QPMA 1E0YA 3LAEA 2MBRA 1WYGA 1MBTA 3NRZB 3NVYB 3I99A 2BVFA 3BW7A 1W1JA 1W1QA 1T3QC 4MLAA 3TSHA 1W1LA 2W54A 1N62C 1MBBA 5ADZA 3W8WA 1SB3B 3S1FA 1QLTA 1DIIA 4PVKA 5AE2A 1FIQB 1JRPA 2P4PA 1JROA 3NS1B 4DNSA 3PM9A 3D2HA 4JB1A 4BBYA 3LLBA 4ZOHB 1AHVA 1FFVC 1V97A 2W3SA 4XLOA 1I19A 2PLSA 1DIQA 3GSYA 1AHZA 2RK5A 2OAIA 3S1CA 1AHUA 3AM9A 3TSJA 3KJMA 2YVSA 1FFUC 5FXEA 3DQ0A 5AE3A 2PLIA 2R8DA 3C0PA 1E8HA 3S1EA 5AE1A 3ETRB 4O95A 2Q4WA 3AMZA 2BVGA 2VFUA 4BC7A 2GQTA 3FWAA 1W1MA 1DZNA 1N63C 1E8GA 4UD8A 3TX1A 3FW8A 2O3GA 3DEDA 4JAYA 2BVHA 1W1RA 1VDVA 2P3HA 1E8FA 2VAOA 2AXRA 1VAOA 1FO4A 1UXYA 3EUB3 1QLUA 2I0KA 1HSKA 4ML8A 5FXFA 1ZXIC 4PZFA 2EXRA 4PVEA 1N5XA 3FW9A 2VFSA
chains in the Genus database with same CATH superfamily
2VFTA 4PWBA 2GQUA 3HRDC 5HHZA 4EC3A 3NVWB 3JS8A 3AN1A 4BC9A 3S1DA 3D2JA 1RM6B 5HQXA 2P13A 1W1KA 1WVEA 2QKNA 5L6FA 3NVVB 2W55A 5FXPA 2VFRA 1N5WC 3FW7A 2Q85A 4PVHA 2R2ZA 5G5GB 3B9JB 1ZR6A 1N60C 4PWCA 5FXDA 5G5HB 5HMRA 2WDWA 4HG0A 1W1OA 3SR6B 3D2DA 2W3RA 3W8ZA 5K8EA 5D79A 3VTEA 4BCAA 1N61C 3NVZB 2IPIA 2E3TA 1WVFA 4PVJA 3EJDB 2VFVA 2NQWA 1W1SA 4PYTA 1F0XA 4OALA 3W8XA 2QPMA 1E0YA 3LAEA 2MBRA 1WYGA 1MBTA 2Y3RA 3NRZB 3NVYB 3I99A 3HSUA 2BVFA 3BW7A 1W1JA 1W1QA 1T3QC 4MLAA 3TSHA 1W1LA 2W54A 1N62C 1MBBA 5ADZA 3W8WA 1SB3B 3S1FA 1QLTA 1DIIA 4PVKA 5AE2A 1FIQB 1JRPA 2P4PA 1JROA 3NS1B 4DNSA 3PM9A 3D2HA 4JB1A 4BBYA 2Y08A 4ZOHB 3LLBA 1AHVA 1FFVC 1V97A 2W3SA 4XLOA 1I19A 2PLSA 1DIQA 3GSYA 1AHZA 3RJ8A 2RK5A 2OAIA 3S1CA 1AHUA 3AM9A 3TSJA 3EJEB 3KJMA 5AWVA 2YVSA 1FFUC 5FXEA 3DQ0A 5AE3A 3POPA 2PLIA 2R8DA 3C0PA 5I1WA 5L6GA 1E8HA 3S1EA 5AE1A 3ETRB 4O95A 2Q4WA 3AMZA 2BVGA 2VFUA 4BC7A 2GQTA 3RJAA 3FWAA 2Y3SA 1W1MA 1DZNA 1N63C 1E8GA 4UD8A 3TX1A 3FW8A 2O3GA 3EJBB 3DEDA 4JAYA 2BVHA 1W1RA 1VDVA 2P3HA 1E8FA 2Y4GA 2VAOA 2AXRA 1VAOA 1FO4A 1UXYA 3EUB3 1QLUA 2I0KA 2UUUA 2UUVA 1HSKA 4ML8A 5FXFA 3PQBA 5I1VA 1ZXIC 4PZFA 2EXRA 4PVEA 1N5XA 3FW9A 2VFSA
chains in the Genus database with same CATH topology
2VFTA 4PWBA 2GQUA 3HRDC 5HHZA 4EC3A 3NVWB 3JS8A 3AN1A 4BC9A 3S1DA 3D2JA 1RM6B 5HQXA 2P13A 1W1KA 1WVEA 2QKNA 5L6FA 3NVVB 2W55A 5FXPA 2VFRA 1N5WC 3FW7A 2Q85A 4PVHA 2R2ZA 5G5GB 3B9JB 1ZR6A 1N60C 4PWCA 5FXDA 5G5HB 5HMRA 2WDWA 4HG0A 1W1OA 3SR6B 3D2DA 2W3RA 3W8ZA 5K8EA 5D79A 3VTEA 4BCAA 1N61C 3NVZB 2IPIA 2E3TA 1WVFA 4PVJA 2VFVA 2NQWA 1W1SA 4PYTA 1F0XA 4OALA 3W8XA 2QPMA 1E0YA 3LAEA 2MBRA 1WYGA 1MBTA 2Y3RA 3NRZB 3NVYB 3I99A 3HSUA 2BVFA 3BW7A 1W1JA 1W1QA 1T3QC 4MLAA 3TSHA 1W1LA 2W54A 1N62C 1MBBA 5ADZA 3W8WA 1SB3B 3S1FA 1QLTA 1DIIA 4PVKA 5AE2A 1FIQB 1JRPA 2P4PA 1JROA 3NS1B 4DNSA 3PM9A 3D2HA 4JB1A 4BBYA 2Y08A 4ZOHB 3LLBA 1AHVA 1FFVC 1V97A 2W3SA 4XLOA 1I19A 2PLSA 1DIQA 3GSYA 1AHZA 3RJ8A 2RK5A 2OAIA 3S1CA 1AHUA 3AM9A 3TSJA 3KJMA 5AWVA 2YVSA 1FFUC 5FXEA 3DQ0A 5AE3A 3POPA 2PLIA 2R8DA 3C0PA 5I1WA 5L6GA 1E8HA 3S1EA 5AE1A 3ETRB 4O95A 2Q4WA 3AMZA 2BVGA 2VFUA 4BC7A 2GQTA 3RJAA 3FWAA 2Y3SA 1W1MA 1DZNA 1N63C 1E8GA 4UD8A 3TX1A 3FW8A 2O3GA 3DEDA 4JAYA 2BVHA 1W1RA 1VDVA 2P3HA 1E8FA 2Y4GA 2VAOA 2AXRA 1VAOA 1FO4A 1UXYA 3EUB3 1QLUA 2I0KA 2UUUA 2UUVA 1HSKA 4ML8A 5FXFA 3PQBA 5I1VA 1ZXIC 4PZFA 2EXRA 4PVEA 1N5XA 3FW9A 2VFSA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2VFT A;  4PWB A;  2GQU A;  3HRD C;  5HHZ A;  4EC3 A;  3NVW B;  3JS8 A;  3AN1 A;  4BC9 A;  3S1D A;  3D2J A;  1RM6 B;  5HQX A;  2P13 A;  1W1K A;  1WVE A;  2QKN A;  3NVV B;  2W55 A;  5FXP A;  2VFR A;  1N5W C;  3FW7 A;  2Q85 A;  4PVH A;  2R2Z A;  5G5G B;  3B9J B;  1ZR6 A;  1N60 C;  4PWC A;  5FXD A;  5G5H B;  5HMR A;  4HG0 A;  1W1O A;  3SR6 B;  3D2D A;  2W3R A;  3W8Z A;  5D79 A;  3VTE A;  4BCA A;  1N61 C;  3NVZ B;  2E3T A;  1WVF A;  4PVJ A;  2VFV A;  2NQW A;  1W1S A;  4PYT A;  1F0X A;  4OAL A;  3W8X A;  2QPM A;  1E0Y A;  3LAE A;  2MBR A;  1WYG A;  1MBT A;  3NRZ B;  3NVY B;  3I99 A;  2BVF A;  3BW7 A;  1W1J A;  1W1Q A;  1T3Q C;  4MLA A;  3TSH A;  1W1L A;  2W54 A;  1N62 C;  1MBB A;  5ADZ A;  3W8W A;  1SB3 B;  3S1F A;  1QLT A;  1DII A;  4PVK A;  5AE2 A;  1FIQ B;  1JRP A;  2P4P A;  1JRO A;  3NS1 B;  4DNS A;  3PM9 A;  3D2H A;  4JB1 A;  4BBY A;  3LLB A;  4ZOH B;  1AHV A;  1FFV C;  1V97 A;  2W3S A;  4XLO A;  1I19 A;  2PLS A;  1DIQ A;  3GSY A;  1AHZ A;  2RK5 A;  2OAI A;  3S1C A;  1AHU A;  3AM9 A;  3TSJ A;  3KJM A;  2YVS A;  1FFU C;  5FXE A;  3DQ0 A;  5AE3 A;  2PLI A;  2R8D A;  3C0P A;  1E8H A;  3S1E A;  5AE1 A;  3ETR B;  4O95 A;  2Q4W A;  3AMZ A;  2BVG A;  2VFU A;  4BC7 A;  2GQT A;  3FWA A;  1W1M A;  1DZN A;  1N63 C;  1E8G A;  4UD8 A;  3TX1 A;  3FW8 A;  2O3G A;  3DED A;  4JAY A;  2BVH A;  1W1R A;  1VDV A;  2P3H A;  1E8F A;  2VAO A;  2AXR A;  1VAO A;  1FO4 A;  1UXY A;  3EUB 3;  1QLU A;  2I0K A;  1HSK A;  4ML8 A;  5FXF A;  1ZXI C;  4PZF A;  2EXR A;  4PVE A;  1N5X A;  3FW9 A;  2VFS A; 
#chains in the Genus database with same CATH topology
 2VFT A;  4PWB A;  2GQU A;  3HRD C;  5HHZ A;  4EC3 A;  3NVW B;  3JS8 A;  3AN1 A;  4BC9 A;  3S1D A;  3D2J A;  1RM6 B;  5HQX A;  2P13 A;  1W1K A;  1WVE A;  2QKN A;  5L6F A;  3NVV B;  2W55 A;  5FXP A;  2VFR A;  1N5W C;  3FW7 A;  2Q85 A;  4PVH A;  2R2Z A;  5G5G B;  3B9J B;  1ZR6 A;  1N60 C;  4PWC A;  5FXD A;  5G5H B;  5HMR A;  2WDW A;  4HG0 A;  1W1O A;  3SR6 B;  3D2D A;  2W3R A;  3W8Z A;  5K8E A;  5D79 A;  3VTE A;  4BCA A;  1N61 C;  3NVZ B;  2IPI A;  2E3T A;  1WVF A;  4PVJ A;  3EJD B;  2VFV A;  2NQW A;  1W1S A;  4PYT A;  1F0X A;  4OAL A;  3W8X A;  2QPM A;  1E0Y A;  3LAE A;  2MBR A;  1WYG A;  1MBT A;  2Y3R A;  3NRZ B;  3NVY B;  3I99 A;  3HSU A;  2BVF A;  3BW7 A;  1W1J A;  1W1Q A;  1T3Q C;  4MLA A;  3TSH A;  1W1L A;  2W54 A;  1N62 C;  1MBB A;  5ADZ A;  3W8W A;  1SB3 B;  3S1F A;  1QLT A;  1DII A;  4PVK A;  5AE2 A;  1FIQ B;  1JRP A;  2P4P A;  1JRO A;  3NS1 B;  4DNS A;  3PM9 A;  3D2H A;  4JB1 A;  4BBY A;  2Y08 A;  4ZOH B;  3LLB A;  1AHV A;  1FFV C;  1V97 A;  2W3S A;  4XLO A;  1I19 A;  2PLS A;  1DIQ A;  3GSY A;  1AHZ A;  3RJ8 A;  2RK5 A;  2OAI A;  3S1C A;  1AHU A;  3AM9 A;  3TSJ A;  3EJE B;  3KJM A;  5AWV A;  2YVS A;  1FFU C;  5FXE A;  3DQ0 A;  5AE3 A;  3POP A;  2PLI A;  2R8D A;  3C0P A;  5I1W A;  5L6G A;  1E8H A;  3S1E A;  5AE1 A;  3ETR B;  4O95 A;  2Q4W A;  3AMZ A;  2BVG A;  2VFU A;  4BC7 A;  2GQT A;  3RJA A;  3FWA A;  2Y3S A;  1W1M A;  1DZN A;  1N63 C;  1E8G A;  4UD8 A;  3TX1 A;  3FW8 A;  2O3G A;  3EJB B;  3DED A;  4JAY A;  2BVH A;  1W1R A;  1VDV A;  2P3H A;  1E8F A;  2Y4G A;  2VAO A;  2AXR A;  1VAO A;  1FO4 A;  1UXY A;  3EUB 3;  1QLU A;  2I0K A;  2UUU A;  2UUV A;  1HSK A;  4ML8 A;  5FXF A;  3PQB A;  5I1V A;  1ZXI C;  4PZF A;  2EXR A;  4PVE A;  1N5X A;  3FW9 A;  2VFS A; 
#chains in the Genus database with same CATH homology
 2VFT A;  4PWB A;  2GQU A;  3HRD C;  5HHZ A;  4EC3 A;  3NVW B;  3JS8 A;  3AN1 A;  4BC9 A;  3S1D A;  3D2J A;  1RM6 B;  5HQX A;  2P13 A;  1W1K A;  1WVE A;  2QKN A;  5L6F A;  3NVV B;  2W55 A;  5FXP A;  2VFR A;  1N5W C;  3FW7 A;  2Q85 A;  4PVH A;  2R2Z A;  5G5G B;  3B9J B;  1ZR6 A;  1N60 C;  4PWC A;  5FXD A;  5G5H B;  5HMR A;  2WDW A;  4HG0 A;  1W1O A;  3SR6 B;  3D2D A;  2W3R A;  3W8Z A;  5K8E A;  5D79 A;  3VTE A;  4BCA A;  1N61 C;  3NVZ B;  2IPI A;  2E3T A;  1WVF A;  4PVJ A;  2VFV A;  2NQW A;  1W1S A;  4PYT A;  1F0X A;  4OAL A;  3W8X A;  2QPM A;  1E0Y A;  3LAE A;  2MBR A;  1WYG A;  1MBT A;  2Y3R A;  3NRZ B;  3NVY B;  3I99 A;  3HSU A;  2BVF A;  3BW7 A;  1W1J A;  1W1Q A;  1T3Q C;  4MLA A;  3TSH A;  1W1L A;  2W54 A;  1N62 C;  1MBB A;  5ADZ A;  3W8W A;  1SB3 B;  3S1F A;  1QLT A;  1DII A;  4PVK A;  5AE2 A;  1FIQ B;  1JRP A;  2P4P A;  1JRO A;  3NS1 B;  4DNS A;  3PM9 A;  3D2H A;  4JB1 A;  4BBY A;  2Y08 A;  4ZOH B;  3LLB A;  1AHV A;  1FFV C;  1V97 A;  2W3S A;  4XLO A;  1I19 A;  2PLS A;  1DIQ A;  3GSY A;  1AHZ A;  3RJ8 A;  2RK5 A;  2OAI A;  3S1C A;  1AHU A;  3AM9 A;  3TSJ A;  3KJM A;  5AWV A;  2YVS A;  1FFU C;  5FXE A;  3DQ0 A;  5AE3 A;  3POP A;  2PLI A;  2R8D A;  3C0P A;  5I1W A;  5L6G A;  1E8H A;  3S1E A;  5AE1 A;  3ETR B;  4O95 A;  2Q4W A;  3AMZ A;  2BVG A;  2VFU A;  4BC7 A;  2GQT A;  3RJA A;  3FWA A;  2Y3S A;  1W1M A;  1DZN A;  1N63 C;  1E8G A;  4UD8 A;  3TX1 A;  3FW8 A;  2O3G A;  3DED A;  4JAY A;  2BVH A;  1W1R A;  1VDV A;  2P3H A;  1E8F A;  2Y4G A;  2VAO A;  2AXR A;  1VAO A;  1FO4 A;  1UXY A;  3EUB 3;  1QLU A;  2I0K A;  2UUU A;  2UUV A;  1HSK A;  4ML8 A;  5FXF A;  3PQB A;  5I1V A;  1ZXI C;  4PZF A;  2EXR A;  4PVE A;  1N5X A;  3FW9 A;  2VFS A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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