1W1QA

Plant cytokinin dehydrogenase in complex with isopentenyladenine
Total Genus 165
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
165
sequence length
495
structure length
479
Chain Sequence
ALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERLTAPRSFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structures of Michaelis and Product Complexes of Plant Cytokinin Dehydrogenase: Implications for Flavoenzyme Catalysis
pubmed doi rcsb
source organism Zea mays
molecule tags Oxidoreductase
molecule keywords CYTOKININ DEHYDROGENASE 1
total genus 165
structure length 479
sequence length 495
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2004-06-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 1w1qA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 1w1qA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 1w1qA03
4PVHA 2W3RA 1FO4A 1ZXIC 1QLUA 2EXRA 4ZOHB 2P4PA 2GQTA 2VFUA 2MBRA 3I99A 1RM6B 3B9JB 1QLTA 4BC9A 1FFVC 2VFVA 2YVSA 2VFRA 3NS1B 1HSKA 4DNSA 2Q4WA 5FXPA 5G5HB 1FFUC 3BW7A 1W1LA 3LLBA 1FIQB 1W1KA 4HG0A 1W1OA 5AE2A 4OALA 1VDVA 2O3GA 3TSHA 1V97A 1MBTA 3TX1A 1W1SA 1N62C 3D2HA 3W8XA 1MBBA 2GQUA 3FW7A 1E8HA 3VTEA 3FWAA 2BVHA 2PLIA 1E8FA 1JROA 5AE3A 4PVJA 3HRDC 1AHZA 3LAEA 1ZR6A 2VFSA 3D2DA 1N63C 1W1QA 2W54A 3S1FA 3DQ0A 3FW8A 5D79A 1W1RA 3D2JA 1WVEA 2NQWA 3NVZB 1DIQA 1VAOA 3ETRB 2R8DA 2Q85A 2QKNA 2VFTA 2VAOA 1N61C 1SB3B 4JB1A 4PVEA 3AM9A 4PVKA 1W1MA 1N60C 4PYTA 4PWBA 2BVFA 1DZNA 1E0YA 1E8GA 4PZFA 2P13A 4XLOA 5FXDA 5HMRA 3NVVB 2PLSA 3GSYA 3DEDA 2QPMA 5HHZA 1I19A 4PWCA 3S1DA 5FXEA 3S1EA 2R2ZA 1AHVA 3AMZA 4BCAA 2AXRA 1N5WC 3W8ZA 4JAYA 1UXYA 2E3TA 4BBYA 5AE1A 5G5GB 3W8WA 2BVGA 1JRPA 2W3SA 3PM9A 3NVWB 4ML8A 2OAIA 2RK5A 3FW9A 4O95A 5ADZA 3AN1A 5FXFA 3TSJA 3EUB3 3S1CA 2P3HA 3NRZB 3JS8A 2I0KA 1WYGA 4EC3A 1AHUA 3NVYB 3C0PA 1F0XA 1W1JA 1T3QC 3SR6B 1WVFA 3KJMA 1DIIA 4BC7A 2W55A 1N5XA 4UD8A 5HQXA 4MLAA
chains in the Genus database with same CATH superfamily
4PVHA 2UUUA 2W3RA 1FO4A 1ZXIC 1QLUA 2EXRA 4ZOHB 2P4PA 2IPIA 2GQTA 2VFUA 2MBRA 3I99A 1RM6B 3B9JB 2Y3SA 1QLTA 3RJAA 4BC9A 1FFVC 2VFVA 5I1VA 2YVSA 2VFRA 3NS1B 1HSKA 3EJEB 4DNSA 2Q4WA 5FXPA 5G5HB 1FFUC 3BW7A 1W1LA 3LLBA 1FIQB 1W1KA 4HG0A 1W1OA 5AE2A 4OALA 1VDVA 2O3GA 3TSHA 1V97A 1MBTA 3TX1A 1W1SA 1N62C 3D2HA 3W8XA 1MBBA 2GQUA 3FW7A 1E8HA 3VTEA 3FWAA 2BVHA 2PLIA 1E8FA 1JROA 5AE3A 4PVJA 2Y08A 1AHZA 3HRDC 3LAEA 1ZR6A 5L6FA 2VFSA 3D2DA 1N63C 1W1QA 2W54A 3S1FA 3DQ0A 3EJDB 3FW8A 5D79A 1W1RA 3D2JA 1WVEA 2NQWA 3NVZB 1DIQA 1VAOA 3ETRB 2R8DA 5L6GA 2Q85A 2QKNA 2VFTA 2UUVA 2VAOA 1N61C 1SB3B 4JB1A 3POPA 3PQBA 4PVEA 3AM9A 4PVKA 1W1MA 1N60C 4PYTA 4PWBA 5I1WA 2BVFA 1DZNA 1E0YA 1E8GA 4PZFA 2P13A 3NVVB 4XLOA 5FXDA 5HMRA 2WDWA 2PLSA 3GSYA 3DEDA 2QPMA 5HHZA 1I19A 4PWCA 3S1DA 5FXEA 3S1EA 2R2ZA 5K8EA 1AHVA 3AMZA 4BCAA 2AXRA 1N5WC 3W8ZA 4JAYA 1UXYA 2E3TA 4BBYA 5AE1A 5G5GB 3W8WA 2BVGA 1JRPA 2W3SA 3NVWB 3PM9A 2Y4GA 4ML8A 2OAIA 2RK5A 3FW9A 4O95A 5ADZA 3AN1A 5FXFA 3TSJA 3EUB3 3S1CA 2P3HA 3NRZB 3JS8A 2I0KA 1WYGA 4EC3A 1AHUA 3NVYB 3C0PA 5AWVA 3RJ8A 1F0XA 1W1JA 1T3QC 3HSUA 3SR6B 1WVFA 3KJMA 1DIIA 4BC7A 2W55A 1N5XA 3EJBB 4UD8A 2Y3RA 5HQXA 4MLAA
chains in the Genus database with same CATH topology
4PVHA 2UUUA 2W3RA 1FO4A 1ZXIC 1QLUA 2EXRA 4ZOHB 2P4PA 2IPIA 2GQTA 2VFUA 2MBRA 3I99A 1RM6B 3B9JB 2Y3SA 1QLTA 3RJAA 4BC9A 1FFVC 2VFVA 5I1VA 2YVSA 2VFRA 3NS1B 1HSKA 4DNSA 2Q4WA 5FXPA 5G5HB 1FFUC 3BW7A 1W1LA 3LLBA 1FIQB 1W1KA 4HG0A 1W1OA 5AE2A 4OALA 1VDVA 2O3GA 3TSHA 1V97A 1MBTA 3TX1A 1W1SA 1N62C 3D2HA 3W8XA 1MBBA 2GQUA 3FW7A 1E8HA 3VTEA 3FWAA 2BVHA 2PLIA 1E8FA 1JROA 5AE3A 4PVJA 2Y08A 1AHZA 3HRDC 3LAEA 1ZR6A 5L6FA 2VFSA 3D2DA 1N63C 1W1QA 2W54A 3S1FA 3DQ0A 3FW8A 5D79A 1W1RA 3D2JA 1WVEA 2NQWA 3NVZB 1DIQA 1VAOA 3ETRB 2R8DA 5L6GA 2Q85A 2QKNA 2VFTA 2UUVA 2VAOA 1N61C 1SB3B 4JB1A 3POPA 3PQBA 4PVEA 3AM9A 4PVKA 1W1MA 1N60C 4PYTA 4PWBA 5I1WA 2BVFA 1DZNA 1E0YA 1E8GA 4PZFA 2P13A 4XLOA 5FXDA 5HMRA 2WDWA 3NVVB 2PLSA 3GSYA 3DEDA 2QPMA 5HHZA 1I19A 4PWCA 3S1DA 5FXEA 3S1EA 2R2ZA 5K8EA 1AHVA 3AMZA 4BCAA 2AXRA 1N5WC 3W8ZA 4JAYA 1UXYA 2E3TA 4BBYA 5AE1A 5G5GB 3W8WA 2BVGA 1JRPA 2W3SA 3PM9A 2Y4GA 3NVWB 4ML8A 2OAIA 2RK5A 3FW9A 4O95A 5ADZA 3AN1A 5FXFA 3TSJA 3EUB3 3S1CA 2P3HA 3NRZB 3JS8A 2I0KA 1WYGA 4EC3A 1AHUA 3NVYB 3C0PA 5AWVA 3RJ8A 1F0XA 1W1JA 1T3QC 3HSUA 3SR6B 1WVFA 3KJMA 1DIIA 4BC7A 2W55A 1N5XA 4UD8A 2Y3RA 5HQXA 4MLAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4PVH A;  2W3R A;  1FO4 A;  1ZXI C;  1QLU A;  2EXR A;  4ZOH B;  2P4P A;  2GQT A;  2VFU A;  2MBR A;  3I99 A;  1RM6 B;  3B9J B;  1QLT A;  4BC9 A;  1FFV C;  2VFV A;  2YVS A;  2VFR A;  3NS1 B;  1HSK A;  4DNS A;  2Q4W A;  5FXP A;  5G5H B;  1FFU C;  3BW7 A;  1W1L A;  3LLB A;  1FIQ B;  1W1K A;  4HG0 A;  1W1O A;  5AE2 A;  4OAL A;  1VDV A;  2O3G A;  3TSH A;  1V97 A;  1MBT A;  3TX1 A;  1W1S A;  1N62 C;  3D2H A;  3W8X A;  1MBB A;  2GQU A;  3FW7 A;  1E8H A;  3VTE A;  3FWA A;  2BVH A;  2PLI A;  1E8F A;  1JRO A;  5AE3 A;  4PVJ A;  3HRD C;  1AHZ A;  3LAE A;  1ZR6 A;  2VFS A;  3D2D A;  1N63 C;  1W1Q A;  2W54 A;  3S1F A;  3DQ0 A;  3FW8 A;  5D79 A;  1W1R A;  3D2J A;  1WVE A;  2NQW A;  3NVZ B;  1DIQ A;  1VAO A;  3ETR B;  2R8D A;  2Q85 A;  2QKN A;  2VFT A;  2VAO A;  1N61 C;  1SB3 B;  4JB1 A;  4PVE A;  3AM9 A;  4PVK A;  1W1M A;  1N60 C;  4PYT A;  4PWB A;  2BVF A;  1DZN A;  1E0Y A;  1E8G A;  4PZF A;  2P13 A;  4XLO A;  5FXD A;  5HMR A;  3NVV B;  2PLS A;  3GSY A;  3DED A;  2QPM A;  5HHZ A;  1I19 A;  4PWC A;  3S1D A;  5FXE A;  3S1E A;  2R2Z A;  1AHV A;  3AMZ A;  4BCA A;  2AXR A;  1N5W C;  3W8Z A;  4JAY A;  1UXY A;  2E3T A;  4BBY A;  5AE1 A;  5G5G B;  3W8W A;  2BVG A;  1JRP A;  2W3S A;  3PM9 A;  3NVW B;  4ML8 A;  2OAI A;  2RK5 A;  3FW9 A;  4O95 A;  5ADZ A;  3AN1 A;  5FXF A;  3TSJ A;  3EUB 3;  3S1C A;  2P3H A;  3NRZ B;  3JS8 A;  2I0K A;  1WYG A;  4EC3 A;  1AHU A;  3NVY B;  3C0P A;  1F0X A;  1W1J A;  1T3Q C;  3SR6 B;  1WVF A;  3KJM A;  1DII A;  4BC7 A;  2W55 A;  1N5X A;  4UD8 A;  5HQX A;  4MLA A; 
#chains in the Genus database with same CATH topology
 4PVH A;  2UUU A;  2W3R A;  1FO4 A;  1ZXI C;  1QLU A;  2EXR A;  4ZOH B;  2P4P A;  2IPI A;  2GQT A;  2VFU A;  2MBR A;  3I99 A;  1RM6 B;  3B9J B;  2Y3S A;  1QLT A;  3RJA A;  4BC9 A;  1FFV C;  2VFV A;  5I1V A;  2YVS A;  2VFR A;  3NS1 B;  1HSK A;  3EJE B;  4DNS A;  2Q4W A;  5FXP A;  5G5H B;  1FFU C;  3BW7 A;  1W1L A;  3LLB A;  1FIQ B;  1W1K A;  4HG0 A;  1W1O A;  5AE2 A;  4OAL A;  1VDV A;  2O3G A;  3TSH A;  1V97 A;  1MBT A;  3TX1 A;  1W1S A;  1N62 C;  3D2H A;  3W8X A;  1MBB A;  2GQU A;  3FW7 A;  1E8H A;  3VTE A;  3FWA A;  2BVH A;  2PLI A;  1E8F A;  1JRO A;  5AE3 A;  4PVJ A;  2Y08 A;  1AHZ A;  3HRD C;  3LAE A;  1ZR6 A;  5L6F A;  2VFS A;  3D2D A;  1N63 C;  1W1Q A;  2W54 A;  3S1F A;  3DQ0 A;  3EJD B;  3FW8 A;  5D79 A;  1W1R A;  3D2J A;  1WVE A;  2NQW A;  3NVZ B;  1DIQ A;  1VAO A;  3ETR B;  2R8D A;  5L6G A;  2Q85 A;  2QKN A;  2VFT A;  2UUV A;  2VAO A;  1N61 C;  1SB3 B;  4JB1 A;  3POP A;  3PQB A;  4PVE A;  3AM9 A;  4PVK A;  1W1M A;  1N60 C;  4PYT A;  4PWB A;  5I1W A;  2BVF A;  1DZN A;  1E0Y A;  1E8G A;  4PZF A;  2P13 A;  3NVV B;  4XLO A;  5FXD A;  5HMR A;  2WDW A;  2PLS A;  3GSY A;  3DED A;  2QPM A;  5HHZ A;  1I19 A;  4PWC A;  3S1D A;  5FXE A;  3S1E A;  2R2Z A;  5K8E A;  1AHV A;  3AMZ A;  4BCA A;  2AXR A;  1N5W C;  3W8Z A;  4JAY A;  1UXY A;  2E3T A;  4BBY A;  5AE1 A;  5G5G B;  3W8W A;  2BVG A;  1JRP A;  2W3S A;  3NVW B;  3PM9 A;  2Y4G A;  4ML8 A;  2OAI A;  2RK5 A;  3FW9 A;  4O95 A;  5ADZ A;  3AN1 A;  5FXF A;  3TSJ A;  3EUB 3;  3S1C A;  2P3H A;  3NRZ B;  3JS8 A;  2I0K A;  1WYG A;  4EC3 A;  1AHU A;  3NVY B;  3C0P A;  5AWV A;  3RJ8 A;  1F0X A;  1W1J A;  1T3Q C;  3HSU A;  3SR6 B;  1WVF A;  3KJM A;  1DII A;  4BC7 A;  2W55 A;  1N5X A;  3EJB B;  4UD8 A;  2Y3R A;  5HQX A;  4MLA A; 
#chains in the Genus database with same CATH homology
 4PVH A;  2UUU A;  2W3R A;  1FO4 A;  1ZXI C;  1QLU A;  2EXR A;  4ZOH B;  2P4P A;  2IPI A;  2GQT A;  2VFU A;  2MBR A;  3I99 A;  1RM6 B;  3B9J B;  2Y3S A;  1QLT A;  3RJA A;  4BC9 A;  1FFV C;  2VFV A;  5I1V A;  2YVS A;  2VFR A;  3NS1 B;  1HSK A;  4DNS A;  2Q4W A;  5FXP A;  5G5H B;  1FFU C;  3BW7 A;  1W1L A;  3LLB A;  1FIQ B;  1W1K A;  4HG0 A;  1W1O A;  5AE2 A;  4OAL A;  1VDV A;  2O3G A;  3TSH A;  1V97 A;  1MBT A;  3TX1 A;  1W1S A;  1N62 C;  3D2H A;  3W8X A;  1MBB A;  2GQU A;  3FW7 A;  1E8H A;  3VTE A;  3FWA A;  2BVH A;  2PLI A;  1E8F A;  1JRO A;  5AE3 A;  4PVJ A;  2Y08 A;  1AHZ A;  3HRD C;  3LAE A;  1ZR6 A;  5L6F A;  2VFS A;  3D2D A;  1N63 C;  1W1Q A;  2W54 A;  3S1F A;  3DQ0 A;  3FW8 A;  5D79 A;  1W1R A;  3D2J A;  1WVE A;  2NQW A;  3NVZ B;  1DIQ A;  1VAO A;  3ETR B;  2R8D A;  5L6G A;  2Q85 A;  2QKN A;  2VFT A;  2UUV A;  2VAO A;  1N61 C;  1SB3 B;  4JB1 A;  3POP A;  3PQB A;  4PVE A;  3AM9 A;  4PVK A;  1W1M A;  1N60 C;  4PYT A;  4PWB A;  5I1W A;  2BVF A;  1DZN A;  1E0Y A;  1E8G A;  4PZF A;  2P13 A;  4XLO A;  5FXD A;  5HMR A;  2WDW A;  3NVV B;  2PLS A;  3GSY A;  3DED A;  2QPM A;  5HHZ A;  1I19 A;  4PWC A;  3S1D A;  5FXE A;  3S1E A;  2R2Z A;  5K8E A;  1AHV A;  3AMZ A;  4BCA A;  2AXR A;  1N5W C;  3W8Z A;  4JAY A;  1UXY A;  2E3T A;  4BBY A;  5AE1 A;  5G5G B;  3W8W A;  2BVG A;  1JRP A;  2W3S A;  3PM9 A;  2Y4G A;  3NVW B;  4ML8 A;  2OAI A;  2RK5 A;  3FW9 A;  4O95 A;  5ADZ A;  3AN1 A;  5FXF A;  3TSJ A;  3EUB 3;  3S1C A;  2P3H A;  3NRZ B;  3JS8 A;  2I0K A;  1WYG A;  4EC3 A;  1AHU A;  3NVY B;  3C0P A;  5AWV A;  3RJ8 A;  1F0X A;  1W1J A;  1T3Q C;  3HSU A;  3SR6 B;  1WVF A;  3KJM A;  1DII A;  4BC7 A;  2W55 A;  1N5X A;  4UD8 A;  2Y3R A;  5HQX A;  4MLA A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...