3W8XA

The complex structure of encm with trifluorotriketide
Total Genus 137
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
137
sequence length
461
structure length
461
Chain Sequence
QFPQLDPATLAAFSAAFRGELIWPSDADYDEARRIWNGTIDRRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSIKVSRRLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGLVLGGGFGWLSRKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVRGGGGNFGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLPYRALQAYSFPGAVVPDRIYTKSGYLNELSDEATDTVLEHAADIASPFTQLELLYLGGAVARVPDDATAYPNRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALAGHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLFRLNQNIPPS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
pubmed doi rcsb
source organism Streptomyces maritimus
molecule tags Oxidoreductase
molecule keywords Putative FAD-dependent oxygenase EncM
total genus 137
structure length 461
sequence length 461
chains with identical sequence B
ec nomenclature ec 1.13.12.-:
pdb deposition date 2013-03-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3w8xA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3w8xA02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3w8xA03
3GSYA 3NVZB 1F0XA 2Y3SA 3FWAA 5ADZA 3KJMA 3NVYB 3FW8A 4PVEA 1W1KA 3D2DA 2P3HA 1ZR6A 2GQUA 2Y08A 1E8HA 1FFVC 2W3SA 3W8WA 1DIIA 3JS8A 5K8EA 2IPIA 3W8XA 2VFSA 3POPA 3PM9A 4HG0A 1AHVA 1SB3B 1I19A 1WVFA 3LAEA 2RK5A 3TSHA 1DIQA 2WDWA 2GQTA 5FXFA 5FXPA 1JRPA 1FFUC 3S1EA 2VFRA 1W1MA 1E8FA 1ZXIC 2VAOA 4JB1A 2W55A 3DEDA 1UXYA 1N63C 2Q4WA 2Y4GA 2Y3RA 1W1SA 4PYTA 2VFTA 3RJAA 3NRZB 5I1VA 3PQBA 5HQXA 1W1OA 3W8ZA 2OAIA 2W54A 1MBBA 1WYGA 1FIQB 4MLAA 3B9JB 5AE1A 5AWVA 1JROA 3FW9A 3D2JA 1FO4A 1E0YA 1QLTA 2O3GA 4PVHA 1W1RA 1QLUA 4ML8A 5D79A 1WVEA 1N62C 1HSKA 4BC7A 5L6FA 2QKNA 2W3RA 3S1CA 2BVHA 2P4PA 5I1WA 2PLIA 3ETRB 1N61C 2E3TA 4O95A 2NQWA 1AHZA 2VFUA 4JAYA 4EC3A 3HRDC 2VFVA 3HSUA 2EXRA 1VAOA 1MBTA 3AM9A 3TSJA 3C0PA 2R8DA 5L6GA 4UD8A 1DZNA 3BW7A 3TX1A 5G5HB 5AE2A 1N5XA 1V97A 4DNSA 2AXRA 3SR6B 2MBRA 4BC9A 4BCAA 2YVSA 1E8GA 2Q85A 3S1DA 5G5GB 3FW7A 3LLBA 1N5WC 2I0KA 2QPMA 1W1JA 2PLSA 4PWCA 5FXEA 3D2HA 4ZOHB 3AN1A 1W1LA 3NS1B 1VDVA 4PZFA 3EUB3 2BVGA 4PVKA 4PWBA 3S1FA 5HHZA 5HMRA 3NVWB 2R2ZA 4PVJA 2BVFA 4OALA 3RJ8A 3NVVB 1W1QA 4BBYA 3VTEA 1RM6B 3DQ0A 5FXDA 5AE3A 2P13A 1N60C 3I99A 1T3QC 3AMZA 1AHUA 4XLOA
chains in the Genus database with same CATH superfamily
3GSYA 3NVZB 1F0XA 2Y3SA 3FWAA 5ADZA 3KJMA 3NVYB 3FW8A 4PVEA 1W1KA 3D2DA 2P3HA 1ZR6A 2GQUA 2Y08A 1E8HA 1FFVC 2W3SA 3W8WA 1DIIA 3JS8A 5K8EA 2IPIA 3W8XA 2VFSA 3POPA 3PM9A 4HG0A 1AHVA 1SB3B 1I19A 1WVFA 2UUUA 3LAEA 2RK5A 3EJDB 1DIQA 3TSHA 2GQTA 2WDWA 5FXFA 5FXPA 1JRPA 1FFUC 3S1EA 2VFRA 1W1MA 1E8FA 1ZXIC 2VAOA 4JB1A 2W55A 3DEDA 1UXYA 1N63C 2Q4WA 2Y4GA 2Y3RA 1W1SA 4PYTA 2VFTA 3RJAA 3NRZB 5I1VA 3PQBA 5HQXA 1W1OA 3W8ZA 2OAIA 2W54A 1MBBA 1WYGA 1FIQB 4MLAA 3B9JB 5AE1A 5AWVA 1JROA 3FW9A 3D2JA 1FO4A 1E0YA 1QLTA 2O3GA 4PVHA 1W1RA 1QLUA 4ML8A 5D79A 1WVEA 1N62C 1HSKA 4BC7A 5L6FA 2QKNA 2W3RA 3S1CA 2BVHA 2P4PA 5I1WA 2PLIA 3ETRB 1N61C 2E3TA 4O95A 2NQWA 1AHZA 2VFUA 4JAYA 4EC3A 3HRDC 2VFVA 3EJEB 3HSUA 2EXRA 1VAOA 1MBTA 3AM9A 3TSJA 3C0PA 2R8DA 5L6GA 4UD8A 1DZNA 3BW7A 3TX1A 5G5HB 5AE2A 1N5XA 1V97A 4DNSA 2AXRA 3SR6B 2MBRA 4BC9A 4BCAA 2YVSA 1E8GA 2Q85A 3S1DA 5G5GB 3FW7A 3LLBA 1N5WC 2I0KA 2QPMA 1W1JA 3EJBB 2PLSA 4PWCA 5FXEA 3D2HA 4ZOHB 2UUVA 3AN1A 1W1LA 3NS1B 1VDVA 4PZFA 3EUB3 2BVGA 4PVKA 4PWBA 3S1FA 5HHZA 5HMRA 3NVWB 2R2ZA 4PVJA 2BVFA 4OALA 3RJ8A 3NVVB 1W1QA 4BBYA 3VTEA 1RM6B 3DQ0A 5FXDA 5AE3A 2P13A 1N60C 3I99A 1T3QC 3AMZA 1AHUA 4XLOA
chains in the Genus database with same CATH topology
3GSYA 3NVZB 1F0XA 2Y3SA 3FWAA 5ADZA 3KJMA 3NVYB 3FW8A 4PVEA 1W1KA 3D2DA 2P3HA 1ZR6A 2GQUA 2Y08A 1E8HA 1FFVC 2W3SA 3W8WA 1DIIA 3JS8A 5K8EA 2IPIA 3W8XA 2VFSA 3POPA 3PM9A 4HG0A 1AHVA 1SB3B 1I19A 1WVFA 2UUUA 3LAEA 2RK5A 3TSHA 1DIQA 2WDWA 2GQTA 5FXFA 5FXPA 1JRPA 1FFUC 3S1EA 2VFRA 1W1MA 1E8FA 1ZXIC 2VAOA 4JB1A 2W55A 3DEDA 1UXYA 1N63C 2Q4WA 2Y4GA 2Y3RA 1W1SA 4PYTA 2VFTA 3RJAA 3NRZB 5I1VA 3PQBA 5HQXA 1W1OA 3W8ZA 2OAIA 2W54A 1MBBA 1WYGA 1FIQB 4MLAA 3B9JB 5AE1A 5AWVA 1JROA 3FW9A 3D2JA 1FO4A 1E0YA 1QLTA 2O3GA 4PVHA 1W1RA 1QLUA 4ML8A 5D79A 1WVEA 1N62C 1HSKA 4BC7A 5L6FA 2QKNA 2W3RA 3S1CA 2BVHA 2P4PA 5I1WA 2PLIA 3ETRB 1N61C 2E3TA 4O95A 2NQWA 1AHZA 2VFUA 4JAYA 4EC3A 3HRDC 2VFVA 3HSUA 2EXRA 1VAOA 1MBTA 3AM9A 3TSJA 3C0PA 2R8DA 5L6GA 4UD8A 1DZNA 3BW7A 3TX1A 5G5HB 5AE2A 1N5XA 1V97A 4DNSA 2AXRA 3SR6B 2MBRA 4BC9A 4BCAA 2YVSA 1E8GA 2Q85A 3S1DA 5G5GB 3FW7A 3LLBA 1N5WC 2I0KA 2QPMA 1W1JA 2PLSA 2UUVA 4PWCA 5FXEA 3D2HA 4ZOHB 3AN1A 1W1LA 3NS1B 1VDVA 4PZFA 3EUB3 2BVGA 4PVKA 4PWBA 3S1FA 5HHZA 5HMRA 3NVWB 2R2ZA 4PVJA 2BVFA 4OALA 3RJ8A 3NVVB 1W1QA 4BBYA 3VTEA 1RM6B 3DQ0A 5FXDA 5AE3A 2P13A 1N60C 3I99A 1T3QC 3AMZA 1AHUA 4XLOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GSY A;  3NVZ B;  1F0X A;  2Y3S A;  3FWA A;  5ADZ A;  3KJM A;  3NVY B;  3FW8 A;  4PVE A;  1W1K A;  3D2D A;  2P3H A;  1ZR6 A;  2GQU A;  2Y08 A;  1E8H A;  1FFV C;  2W3S A;  3W8W A;  1DII A;  3JS8 A;  5K8E A;  2IPI A;  3W8X A;  2VFS A;  3POP A;  3PM9 A;  4HG0 A;  1AHV A;  1SB3 B;  1I19 A;  1WVF A;  3LAE A;  2RK5 A;  3TSH A;  1DIQ A;  2WDW A;  2GQT A;  5FXF A;  5FXP A;  1JRP A;  1FFU C;  3S1E A;  2VFR A;  1W1M A;  1E8F A;  1ZXI C;  2VAO A;  4JB1 A;  2W55 A;  3DED A;  1UXY A;  1N63 C;  2Q4W A;  2Y4G A;  2Y3R A;  1W1S A;  4PYT A;  2VFT A;  3RJA A;  3NRZ B;  5I1V A;  3PQB A;  5HQX A;  1W1O A;  3W8Z A;  2OAI A;  2W54 A;  1MBB A;  1WYG A;  1FIQ B;  4MLA A;  3B9J B;  5AE1 A;  5AWV A;  1JRO A;  3FW9 A;  3D2J A;  1FO4 A;  1E0Y A;  1QLT A;  2O3G A;  4PVH A;  1W1R A;  1QLU A;  4ML8 A;  5D79 A;  1WVE A;  1N62 C;  1HSK A;  4BC7 A;  5L6F A;  2QKN A;  2W3R A;  3S1C A;  2BVH A;  2P4P A;  5I1W A;  2PLI A;  3ETR B;  1N61 C;  2E3T A;  4O95 A;  2NQW A;  1AHZ A;  2VFU A;  4JAY A;  4EC3 A;  3HRD C;  2VFV A;  3HSU A;  2EXR A;  1VAO A;  1MBT A;  3AM9 A;  3TSJ A;  3C0P A;  2R8D A;  5L6G A;  4UD8 A;  1DZN A;  3BW7 A;  3TX1 A;  5G5H B;  5AE2 A;  1N5X A;  1V97 A;  4DNS A;  2AXR A;  3SR6 B;  2MBR A;  4BC9 A;  4BCA A;  2YVS A;  1E8G A;  2Q85 A;  3S1D A;  5G5G B;  3FW7 A;  3LLB A;  1N5W C;  2I0K A;  2QPM A;  1W1J A;  2PLS A;  4PWC A;  5FXE A;  3D2H A;  4ZOH B;  3AN1 A;  1W1L A;  3NS1 B;  1VDV A;  4PZF A;  3EUB 3;  2BVG A;  4PVK A;  4PWB A;  3S1F A;  5HHZ A;  5HMR A;  3NVW B;  2R2Z A;  4PVJ A;  2BVF A;  4OAL A;  3RJ8 A;  3NVV B;  1W1Q A;  4BBY A;  3VTE A;  1RM6 B;  3DQ0 A;  5FXD A;  5AE3 A;  2P13 A;  1N60 C;  3I99 A;  1T3Q C;  3AMZ A;  1AHU A;  4XLO A; 
#chains in the Genus database with same CATH topology
 3GSY A;  3NVZ B;  1F0X A;  2Y3S A;  3FWA A;  5ADZ A;  3KJM A;  3NVY B;  3FW8 A;  4PVE A;  1W1K A;  3D2D A;  2P3H A;  1ZR6 A;  2GQU A;  2Y08 A;  1E8H A;  1FFV C;  2W3S A;  3W8W A;  1DII A;  3JS8 A;  5K8E A;  2IPI A;  3W8X A;  2VFS A;  3POP A;  3PM9 A;  4HG0 A;  1AHV A;  1SB3 B;  1I19 A;  1WVF A;  2UUU A;  3LAE A;  2RK5 A;  3EJD B;  1DIQ A;  3TSH A;  2GQT A;  2WDW A;  5FXF A;  5FXP A;  1JRP A;  1FFU C;  3S1E A;  2VFR A;  1W1M A;  1E8F A;  1ZXI C;  2VAO A;  4JB1 A;  2W55 A;  3DED A;  1UXY A;  1N63 C;  2Q4W A;  2Y4G A;  2Y3R A;  1W1S A;  4PYT A;  2VFT A;  3RJA A;  3NRZ B;  5I1V A;  3PQB A;  5HQX A;  1W1O A;  3W8Z A;  2OAI A;  2W54 A;  1MBB A;  1WYG A;  1FIQ B;  4MLA A;  3B9J B;  5AE1 A;  5AWV A;  1JRO A;  3FW9 A;  3D2J A;  1FO4 A;  1E0Y A;  1QLT A;  2O3G A;  4PVH A;  1W1R A;  1QLU A;  4ML8 A;  5D79 A;  1WVE A;  1N62 C;  1HSK A;  4BC7 A;  5L6F A;  2QKN A;  2W3R A;  3S1C A;  2BVH A;  2P4P A;  5I1W A;  2PLI A;  3ETR B;  1N61 C;  2E3T A;  4O95 A;  2NQW A;  1AHZ A;  2VFU A;  4JAY A;  4EC3 A;  3HRD C;  2VFV A;  3EJE B;  3HSU A;  2EXR A;  1VAO A;  1MBT A;  3AM9 A;  3TSJ A;  3C0P A;  2R8D A;  5L6G A;  4UD8 A;  1DZN A;  3BW7 A;  3TX1 A;  5G5H B;  5AE2 A;  1N5X A;  1V97 A;  4DNS A;  2AXR A;  3SR6 B;  2MBR A;  4BC9 A;  4BCA A;  2YVS A;  1E8G A;  2Q85 A;  3S1D A;  5G5G B;  3FW7 A;  3LLB A;  1N5W C;  2I0K A;  2QPM A;  1W1J A;  3EJB B;  2PLS A;  4PWC A;  5FXE A;  3D2H A;  4ZOH B;  2UUV A;  3AN1 A;  1W1L A;  3NS1 B;  1VDV A;  4PZF A;  3EUB 3;  2BVG A;  4PVK A;  4PWB A;  3S1F A;  5HHZ A;  5HMR A;  3NVW B;  2R2Z A;  4PVJ A;  2BVF A;  4OAL A;  3RJ8 A;  3NVV B;  1W1Q A;  4BBY A;  3VTE A;  1RM6 B;  3DQ0 A;  5FXD A;  5AE3 A;  2P13 A;  1N60 C;  3I99 A;  1T3Q C;  3AMZ A;  1AHU A;  4XLO A; 
#chains in the Genus database with same CATH homology
 3GSY A;  3NVZ B;  1F0X A;  2Y3S A;  3FWA A;  5ADZ A;  3KJM A;  3NVY B;  3FW8 A;  4PVE A;  1W1K A;  3D2D A;  2P3H A;  1ZR6 A;  2GQU A;  2Y08 A;  1E8H A;  1FFV C;  2W3S A;  3W8W A;  1DII A;  3JS8 A;  5K8E A;  2IPI A;  3W8X A;  2VFS A;  3POP A;  3PM9 A;  4HG0 A;  1AHV A;  1SB3 B;  1I19 A;  1WVF A;  2UUU A;  3LAE A;  2RK5 A;  3TSH A;  1DIQ A;  2WDW A;  2GQT A;  5FXF A;  5FXP A;  1JRP A;  1FFU C;  3S1E A;  2VFR A;  1W1M A;  1E8F A;  1ZXI C;  2VAO A;  4JB1 A;  2W55 A;  3DED A;  1UXY A;  1N63 C;  2Q4W A;  2Y4G A;  2Y3R A;  1W1S A;  4PYT A;  2VFT A;  3RJA A;  3NRZ B;  5I1V A;  3PQB A;  5HQX A;  1W1O A;  3W8Z A;  2OAI A;  2W54 A;  1MBB A;  1WYG A;  1FIQ B;  4MLA A;  3B9J B;  5AE1 A;  5AWV A;  1JRO A;  3FW9 A;  3D2J A;  1FO4 A;  1E0Y A;  1QLT A;  2O3G A;  4PVH A;  1W1R A;  1QLU A;  4ML8 A;  5D79 A;  1WVE A;  1N62 C;  1HSK A;  4BC7 A;  5L6F A;  2QKN A;  2W3R A;  3S1C A;  2BVH A;  2P4P A;  5I1W A;  2PLI A;  3ETR B;  1N61 C;  2E3T A;  4O95 A;  2NQW A;  1AHZ A;  2VFU A;  4JAY A;  4EC3 A;  3HRD C;  2VFV A;  3HSU A;  2EXR A;  1VAO A;  1MBT A;  3AM9 A;  3TSJ A;  3C0P A;  2R8D A;  5L6G A;  4UD8 A;  1DZN A;  3BW7 A;  3TX1 A;  5G5H B;  5AE2 A;  1N5X A;  1V97 A;  4DNS A;  2AXR A;  3SR6 B;  2MBR A;  4BC9 A;  4BCA A;  2YVS A;  1E8G A;  2Q85 A;  3S1D A;  5G5G B;  3FW7 A;  3LLB A;  1N5W C;  2I0K A;  2QPM A;  1W1J A;  2PLS A;  2UUV A;  4PWC A;  5FXE A;  3D2H A;  4ZOH B;  3AN1 A;  1W1L A;  3NS1 B;  1VDV A;  4PZF A;  3EUB 3;  2BVG A;  4PVK A;  4PWB A;  3S1F A;  5HHZ A;  5HMR A;  3NVW B;  2R2Z A;  4PVJ A;  2BVF A;  4OAL A;  3RJ8 A;  3NVV B;  1W1Q A;  4BBY A;  3VTE A;  1RM6 B;  3DQ0 A;  5FXD A;  5AE3 A;  2P13 A;  1N60 C;  3I99 A;  1T3Q C;  3AMZ A;  1AHU A;  4XLO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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