3W8XA

The complex structure of encm with trifluorotriketide
Total Genus 137
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
137
sequence length
461
structure length
461
Chain Sequence
QFPQLDPATLAAFSAAFRGELIWPSDADYDEARRIWNGTIDRRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSIKVSRRLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGLVLGGGFGWLSRKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVRGGGGNFGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLPYRALQAYSFPGAVVPDRIYTKSGYLNELSDEATDTVLEHAADIASPFTQLELLYLGGAVARVPDDATAYPNRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALAGHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLFRLNQNIPPS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Putative FAD-dependent oxygenase EncM
publication title Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
pubmed doi rcsb
source organism Streptomyces maritimus
molecule tags Oxidoreductase
total genus 137
structure length 461
sequence length 461
chains with identical sequence B
ec nomenclature ec 1.13.12.-:
pdb deposition date 2013-03-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3w8xA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3w8xA02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3w8xA03
3FW7A 5FXFA 1DZNA 3POPA 2BVGA 3SR6B 3AN1A 4DNSA 1W1RA 2GQTA 3NS1B 4JAYA 5FXDA 3JS8A 4PVKA 1N62C 3AM9A 1N5XA 2BVFA 1N63C 3S1FA 4BBYA 4BC9A 1FO4A 3B9JB 1FIQB 1FFVC 2VFRA 3FWAA 2E3TA 2GQUA 1T3QC 4HG0A 1JROA 1N5WC 2MBRA 2W3RA 1UXYA 1N61C 2VFUA 1VDVA 1FFUC 4MLAA 5FXPA 4BC7A 5I1WA 3AMZA 5HHZA 1MBBA 5I1VA 5G5GB 1QLUA 3PQBA 5AWVA 4JB1A 2R2ZA 1W1KA 2W3SA 3NVVB 2WDWA 1W1LA 2Y3SA 2P13A 1I19A 2EXRA 5K8EA 1MBTA 2Q85A 3FW9A 2VFVA 1SB3B 2VAOA 1JRPA 1W1MA 1WVEA 1E0YA 5FXEA 1W1OA 2VFSA 3D2HA 2O3GA 1AHZA 5AE1A 4PZFA 1W1JA 2VFTA 3RJ8A 2W54A 4EC3A 3LAEA 4XLOA 2QKNA 5AE3A 3W8ZA 2P3HA 3FW8A 4ML8A 3NVWB 3S1DA 3S1CA 2NQWA 2PLIA 2RK5A 1HSKA 3NVZB 3S1EA 3LLBA 4PVHA 3HSUA 3EUB3 2I0KA 1VAOA 3ETRB 2OAIA 3GSYA 1DIIA 4PYTA 3TSHA 1N60C 4OALA 5L6GA 4BCAA 4PVJA 5G5HB 1F0XA 1WVFA 3NRZB 1ZXIC 2YVSA 3I99A 4PWBA 2W55A 1V97A 3TX1A 3VTEA 1DIQA 1E8FA 3BW7A 5AE2A 5HMRA 3W8XA 4ZOHB 1W1QA 3C0PA 1RM6B 1AHUA 1W1SA 2Y08A 2BVHA 3DEDA 1AHVA 2Y4GA 2Q4WA 4O95A 4UD8A 5L6FA 5ADZA 2P4PA 3RJAA 4PWCA 2AXRA 5HQXA 3KJMA 2QPMA 4PVEA 1E8GA 5D79A 2Y3RA 2IPIA 1E8HA 3D2DA 1ZR6A 3HRDC 2R8DA 3DQ0A 1WYGA 2PLSA 3W8WA 3PM9A 3NVYB 1QLTA 3TSJA 3D2JA
chains in the Genus database with same CATH superfamily
3FW7A 5FXFA 1DZNA 3POPA 2BVGA 3SR6B 3AN1A 4DNSA 1W1RA 2GQTA 3NS1B 4JAYA 5FXDA 3JS8A 4PVKA 1N62C 3AM9A 1N5XA 2BVFA 1N63C 3S1FA 4BBYA 4BC9A 1FO4A 3B9JB 1FIQB 1FFVC 2VFRA 3FWAA 2E3TA 2GQUA 1T3QC 4HG0A 1JROA 1N5WC 2MBRA 2W3RA 1UXYA 1N61C 2VFUA 1VDVA 1FFUC 4MLAA 5FXPA 4BC7A 5I1WA 3AMZA 5HHZA 1MBBA 5I1VA 5G5GB 1QLUA 3PQBA 5AWVA 4JB1A 2R2ZA 1W1KA 2W3SA 3NVVB 2WDWA 2UUUA 1W1LA 2Y3SA 3EJBB 2P13A 1I19A 2EXRA 5K8EA 1MBTA 2Q85A 3FW9A 2VFVA 1SB3B 2VAOA 1JRPA 1W1MA 1WVEA 1E0YA 5FXEA 1W1OA 2VFSA 3EJEB 3D2HA 2O3GA 1AHZA 5AE1A 4PZFA 1W1JA 2VFTA 2UUVA 3RJ8A 2W54A 4EC3A 3LAEA 4XLOA 2QKNA 5AE3A 3W8ZA 2P3HA 3FW8A 4ML8A 3NVWB 3S1DA 3S1CA 2NQWA 2PLIA 2RK5A 1HSKA 3NVZB 3S1EA 3LLBA 4PVHA 3HSUA 3EUB3 2I0KA 1VAOA 3ETRB 2OAIA 3GSYA 1DIIA 4PYTA 3TSHA 1N60C 4OALA 5L6GA 4BCAA 4PVJA 5G5HB 1F0XA 1WVFA 3NRZB 1ZXIC 2YVSA 3I99A 4PWBA 2W55A 1V97A 3TX1A 3VTEA 1DIQA 1E8FA 3BW7A 5AE2A 5HMRA 3W8XA 4ZOHB 1W1QA 3C0PA 1RM6B 1AHUA 1W1SA 2Y08A 2BVHA 2Y4GA 1AHVA 3DEDA 2Q4WA 4O95A 4UD8A 5L6FA 5ADZA 2P4PA 3RJAA 4PWCA 2AXRA 5HQXA 3KJMA 2QPMA 4PVEA 1E8GA 3EJDB 5D79A 2Y3RA 2IPIA 1E8HA 3D2DA 1ZR6A 3HRDC 2R8DA 3DQ0A 1WYGA 2PLSA 3W8WA 3PM9A 3NVYB 1QLTA 3TSJA 3D2JA
chains in the Genus database with same CATH topology
3FW7A 5FXFA 1DZNA 3POPA 2BVGA 3SR6B 3AN1A 4DNSA 1W1RA 2GQTA 3NS1B 4JAYA 5FXDA 3JS8A 4PVKA 1N62C 3AM9A 1N5XA 2BVFA 1N63C 3S1FA 4BBYA 4BC9A 1FO4A 3B9JB 1FIQB 1FFVC 2VFRA 3FWAA 2E3TA 2GQUA 1T3QC 4HG0A 1JROA 1N5WC 2MBRA 2W3RA 1UXYA 1N61C 2VFUA 1VDVA 1FFUC 4MLAA 5FXPA 4BC7A 5I1WA 3AMZA 5HHZA 1MBBA 5I1VA 5G5GB 1QLUA 3PQBA 5AWVA 4JB1A 2R2ZA 1W1KA 2W3SA 3NVVB 2WDWA 2UUUA 1W1LA 2Y3SA 2P13A 1I19A 2EXRA 5K8EA 1MBTA 2Q85A 3FW9A 2VFVA 1SB3B 2VAOA 1JRPA 1W1MA 1WVEA 1E0YA 5FXEA 1W1OA 2VFSA 3D2HA 2O3GA 1AHZA 5AE1A 4PZFA 1W1JA 2VFTA 2UUVA 3RJ8A 2W54A 4EC3A 3LAEA 4XLOA 2QKNA 5AE3A 3W8ZA 2P3HA 3FW8A 4ML8A 3NVWB 3S1DA 3S1CA 2NQWA 2PLIA 2RK5A 1HSKA 3NVZB 3S1EA 3LLBA 4PVHA 3HSUA 3EUB3 2I0KA 1VAOA 3ETRB 2OAIA 3GSYA 1DIIA 4PYTA 3TSHA 1N60C 4OALA 5L6GA 4BCAA 4PVJA 5G5HB 1F0XA 1WVFA 3NRZB 1ZXIC 2YVSA 3I99A 4PWBA 2W55A 1V97A 3TX1A 3VTEA 1DIQA 1E8FA 3BW7A 5AE2A 5HMRA 3W8XA 4ZOHB 1W1QA 3C0PA 1RM6B 1AHUA 1W1SA 2Y08A 2BVHA 2Y4GA 1AHVA 3DEDA 2Q4WA 4O95A 4UD8A 5L6FA 5ADZA 2P4PA 3RJAA 4PWCA 2AXRA 5HQXA 3KJMA 2QPMA 4PVEA 1E8GA 5D79A 2Y3RA 2IPIA 1E8HA 3D2DA 1ZR6A 3HRDC 2R8DA 3DQ0A 1WYGA 2PLSA 3W8WA 3PM9A 3NVYB 1QLTA 3TSJA 3D2JA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FW7 A;  5FXF A;  1DZN A;  3POP A;  2BVG A;  3SR6 B;  3AN1 A;  4DNS A;  1W1R A;  2GQT A;  3NS1 B;  4JAY A;  5FXD A;  3JS8 A;  4PVK A;  1N62 C;  3AM9 A;  1N5X A;  2BVF A;  1N63 C;  3S1F A;  4BBY A;  4BC9 A;  1FO4 A;  3B9J B;  1FIQ B;  1FFV C;  2VFR A;  3FWA A;  2E3T A;  2GQU A;  1T3Q C;  4HG0 A;  1JRO A;  1N5W C;  2MBR A;  2W3R A;  1UXY A;  1N61 C;  2VFU A;  1VDV A;  1FFU C;  4MLA A;  5FXP A;  4BC7 A;  5I1W A;  3AMZ A;  5HHZ A;  1MBB A;  5I1V A;  5G5G B;  1QLU A;  3PQB A;  5AWV A;  4JB1 A;  2R2Z A;  1W1K A;  2W3S A;  3NVV B;  2WDW A;  1W1L A;  2Y3S A;  2P13 A;  1I19 A;  2EXR A;  5K8E A;  1MBT A;  2Q85 A;  3FW9 A;  2VFV A;  1SB3 B;  2VAO A;  1JRP A;  1W1M A;  1WVE A;  1E0Y A;  5FXE A;  1W1O A;  2VFS A;  3D2H A;  2O3G A;  1AHZ A;  5AE1 A;  4PZF A;  1W1J A;  2VFT A;  3RJ8 A;  2W54 A;  4EC3 A;  3LAE A;  4XLO A;  2QKN A;  5AE3 A;  3W8Z A;  2P3H A;  3FW8 A;  4ML8 A;  3NVW B;  3S1D A;  3S1C A;  2NQW A;  2PLI A;  2RK5 A;  1HSK A;  3NVZ B;  3S1E A;  3LLB A;  4PVH A;  3HSU A;  3EUB 3;  2I0K A;  1VAO A;  3ETR B;  2OAI A;  3GSY A;  1DII A;  4PYT A;  3TSH A;  1N60 C;  4OAL A;  5L6G A;  4BCA A;  4PVJ A;  5G5H B;  1F0X A;  1WVF A;  3NRZ B;  1ZXI C;  2YVS A;  3I99 A;  4PWB A;  2W55 A;  1V97 A;  3TX1 A;  3VTE A;  1DIQ A;  1E8F A;  3BW7 A;  5AE2 A;  5HMR A;  3W8X A;  4ZOH B;  1W1Q A;  3C0P A;  1RM6 B;  1AHU A;  1W1S A;  2Y08 A;  2BVH A;  3DED A;  1AHV A;  2Y4G A;  2Q4W A;  4O95 A;  4UD8 A;  5L6F A;  5ADZ A;  2P4P A;  3RJA A;  4PWC A;  2AXR A;  5HQX A;  3KJM A;  2QPM A;  4PVE A;  1E8G A;  5D79 A;  2Y3R A;  2IPI A;  1E8H A;  3D2D A;  1ZR6 A;  3HRD C;  2R8D A;  3DQ0 A;  1WYG A;  2PLS A;  3W8W A;  3PM9 A;  3NVY B;  1QLT A;  3TSJ A;  3D2J A; 
#chains in the Genus database with same CATH topology
 3FW7 A;  5FXF A;  1DZN A;  3POP A;  2BVG A;  3SR6 B;  3AN1 A;  4DNS A;  1W1R A;  2GQT A;  3NS1 B;  4JAY A;  5FXD A;  3JS8 A;  4PVK A;  1N62 C;  3AM9 A;  1N5X A;  2BVF A;  1N63 C;  3S1F A;  4BBY A;  4BC9 A;  1FO4 A;  3B9J B;  1FIQ B;  1FFV C;  2VFR A;  3FWA A;  2E3T A;  2GQU A;  1T3Q C;  4HG0 A;  1JRO A;  1N5W C;  2MBR A;  2W3R A;  1UXY A;  1N61 C;  2VFU A;  1VDV A;  1FFU C;  4MLA A;  5FXP A;  4BC7 A;  5I1W A;  3AMZ A;  5HHZ A;  1MBB A;  5I1V A;  5G5G B;  1QLU A;  3PQB A;  5AWV A;  4JB1 A;  2R2Z A;  1W1K A;  2W3S A;  3NVV B;  2WDW A;  2UUU A;  1W1L A;  2Y3S A;  3EJB B;  2P13 A;  1I19 A;  2EXR A;  5K8E A;  1MBT A;  2Q85 A;  3FW9 A;  2VFV A;  1SB3 B;  2VAO A;  1JRP A;  1W1M A;  1WVE A;  1E0Y A;  5FXE A;  1W1O A;  2VFS A;  3EJE B;  3D2H A;  2O3G A;  1AHZ A;  5AE1 A;  4PZF A;  1W1J A;  2VFT A;  2UUV A;  3RJ8 A;  2W54 A;  4EC3 A;  3LAE A;  4XLO A;  2QKN A;  5AE3 A;  3W8Z A;  2P3H A;  3FW8 A;  4ML8 A;  3NVW B;  3S1D A;  3S1C A;  2NQW A;  2PLI A;  2RK5 A;  1HSK A;  3NVZ B;  3S1E A;  3LLB A;  4PVH A;  3HSU A;  3EUB 3;  2I0K A;  1VAO A;  3ETR B;  2OAI A;  3GSY A;  1DII A;  4PYT A;  3TSH A;  1N60 C;  4OAL A;  5L6G A;  4BCA A;  4PVJ A;  5G5H B;  1F0X A;  1WVF A;  3NRZ B;  1ZXI C;  2YVS A;  3I99 A;  4PWB A;  2W55 A;  1V97 A;  3TX1 A;  3VTE A;  1DIQ A;  1E8F A;  3BW7 A;  5AE2 A;  5HMR A;  3W8X A;  4ZOH B;  1W1Q A;  3C0P A;  1RM6 B;  1AHU A;  1W1S A;  2Y08 A;  2BVH A;  2Y4G A;  1AHV A;  3DED A;  2Q4W A;  4O95 A;  4UD8 A;  5L6F A;  5ADZ A;  2P4P A;  3RJA A;  4PWC A;  2AXR A;  5HQX A;  3KJM A;  2QPM A;  4PVE A;  1E8G A;  3EJD B;  5D79 A;  2Y3R A;  2IPI A;  1E8H A;  3D2D A;  1ZR6 A;  3HRD C;  2R8D A;  3DQ0 A;  1WYG A;  2PLS A;  3W8W A;  3PM9 A;  3NVY B;  1QLT A;  3TSJ A;  3D2J A; 
#chains in the Genus database with same CATH homology
 3FW7 A;  5FXF A;  1DZN A;  3POP A;  2BVG A;  3SR6 B;  3AN1 A;  4DNS A;  1W1R A;  2GQT A;  3NS1 B;  4JAY A;  5FXD A;  3JS8 A;  4PVK A;  1N62 C;  3AM9 A;  1N5X A;  2BVF A;  1N63 C;  3S1F A;  4BBY A;  4BC9 A;  1FO4 A;  3B9J B;  1FIQ B;  1FFV C;  2VFR A;  3FWA A;  2E3T A;  2GQU A;  1T3Q C;  4HG0 A;  1JRO A;  1N5W C;  2MBR A;  2W3R A;  1UXY A;  1N61 C;  2VFU A;  1VDV A;  1FFU C;  4MLA A;  5FXP A;  4BC7 A;  5I1W A;  3AMZ A;  5HHZ A;  1MBB A;  5I1V A;  5G5G B;  1QLU A;  3PQB A;  5AWV A;  4JB1 A;  2R2Z A;  1W1K A;  2W3S A;  3NVV B;  2WDW A;  2UUU A;  1W1L A;  2Y3S A;  2P13 A;  1I19 A;  2EXR A;  5K8E A;  1MBT A;  2Q85 A;  3FW9 A;  2VFV A;  1SB3 B;  2VAO A;  1JRP A;  1W1M A;  1WVE A;  1E0Y A;  5FXE A;  1W1O A;  2VFS A;  3D2H A;  2O3G A;  1AHZ A;  5AE1 A;  4PZF A;  1W1J A;  2VFT A;  2UUV A;  3RJ8 A;  2W54 A;  4EC3 A;  3LAE A;  4XLO A;  2QKN A;  5AE3 A;  3W8Z A;  2P3H A;  3FW8 A;  4ML8 A;  3NVW B;  3S1D A;  3S1C A;  2NQW A;  2PLI A;  2RK5 A;  1HSK A;  3NVZ B;  3S1E A;  3LLB A;  4PVH A;  3HSU A;  3EUB 3;  2I0K A;  1VAO A;  3ETR B;  2OAI A;  3GSY A;  1DII A;  4PYT A;  3TSH A;  1N60 C;  4OAL A;  5L6G A;  4BCA A;  4PVJ A;  5G5H B;  1F0X A;  1WVF A;  3NRZ B;  1ZXI C;  2YVS A;  3I99 A;  4PWB A;  2W55 A;  1V97 A;  3TX1 A;  3VTE A;  1DIQ A;  1E8F A;  3BW7 A;  5AE2 A;  5HMR A;  3W8X A;  4ZOH B;  1W1Q A;  3C0P A;  1RM6 B;  1AHU A;  1W1S A;  2Y08 A;  2BVH A;  2Y4G A;  1AHV A;  3DED A;  2Q4W A;  4O95 A;  4UD8 A;  5L6F A;  5ADZ A;  2P4P A;  3RJA A;  4PWC A;  2AXR A;  5HQX A;  3KJM A;  2QPM A;  4PVE A;  1E8G A;  5D79 A;  2Y3R A;  2IPI A;  1E8H A;  3D2D A;  1ZR6 A;  3HRD C;  2R8D A;  3DQ0 A;  1WYG A;  2PLS A;  3W8W A;  3PM9 A;  3NVY B;  1QLT A;  3TSJ A;  3D2J A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...