3W8XA

The complex structure of encm with trifluorotriketide
Total Genus 137
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
137
sequence length
461
structure length
461
Chain Sequence
QFPQLDPATLAAFSAAFRGELIWPSDADYDEARRIWNGTIDRRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSIKVSRRLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGLVLGGGFGWLSRKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVRGGGGNFGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLPYRALQAYSFPGAVVPDRIYTKSGYLNELSDEATDTVLEHAADIASPFTQLELLYLGGAVARVPDDATAYPNRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALAGHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLFRLNQNIPPS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
pubmed doi rcsb
source organism Streptomyces maritimus
molecule tags Oxidoreductase
molecule keywords Putative FAD-dependent oxygenase EncM
total genus 137
structure length 461
sequence length 461
chains with identical sequence B
ec nomenclature ec 1.13.12.-:
pdb deposition date 2013-03-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3w8xA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3w8xA02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3w8xA03
1N62C 1W1MA 4DNSA 3EUB3 1MBBA 5HMRA 1WVEA 2W55A 1W1LA 3NS1B 5FXEA 3D2JA 5I1VA 1QLUA 5L6FA 2VFUA 1F0XA 2O3GA 3NVVB 2VFSA 1MBTA 2PLSA 3AM9A 4JB1A 1I19A 3PQBA 1AHUA 5AWVA 1DZNA 5I1WA 4BC9A 3BW7A 3NVYB 4EC3A 2BVGA 4O95A 5L6GA 1VDVA 3S1CA 5FXFA 3KJMA 3SR6B 4ML8A 1V97A 2GQUA 4HG0A 3S1FA 1N60C 1W1RA 2VAOA 3NVZB 2VFRA 3FW8A 1W1QA 5G5GB 2BVFA 2Y08A 4MLAA 2AXRA 2MBRA 3D2HA 5HHZA 2E3TA 3ETRB 1RM6B 2IPIA 1W1OA 3DEDA 2YVSA 2Q85A 3TSJA 2GQTA 1W1JA 1DIIA 4PZFA 3S1DA 3GSYA 1E8GA 1WYGA 4UD8A 3HSUA 4PVHA 5AE1A 1HSKA 4BC7A 1W1KA 5HQXA 2OAIA 3RJ8A 5G5HB 1DIQA 4BCAA 2R2ZA 2P3HA 4PWBA 5K8EA 2VFVA 1ZXIC 2RK5A 1SB3B 1T3QC 3B9JB 3S1EA 2R8DA 4JAYA 5AE3A 4OALA 4BBYA 4PVKA 2Y3RA 1QLTA 2W54A 3W8ZA 2Y4GA 1AHVA 2I0KA 1FFVC 3FWAA 3W8XA 2W3SA 3NRZB 2VFTA 5FXPA 3C0PA 3LAEA 5AE2A 1E8FA 2PLIA 3PM9A 3JS8A 1N5XA 3I99A 2P13A 5D79A 3NVWB 1FFUC 3LLBA 2Q4WA 3FW9A 2WDWA 2BVHA 2NQWA 2QKNA 4PVJA 1FIQB 5FXDA 1WVFA 2Y3SA 2P4PA 3HRDC 1E0YA 5ADZA 1N63C 3FW7A 3D2DA 4XLOA 1ZR6A 3RJAA 1N5WC 3AN1A 1VAOA 3AMZA 3TSHA 1JRPA 3W8WA 4PYTA 3TX1A 1UXYA 4ZOHB 2QPMA 2EXRA 1JROA 2W3RA 1FO4A 1AHZA 1E8HA 1N61C 4PVEA 1W1SA 3DQ0A 3POPA 3VTEA 4PWCA
chains in the Genus database with same CATH superfamily
1N62C 1W1MA 4DNSA 3EUB3 1MBBA 5HMRA 1WVEA 2W55A 1W1LA 3NS1B 5FXEA 3D2JA 5I1VA 1QLUA 5L6FA 2VFUA 1F0XA 3NVVB 2O3GA 2VFSA 1MBTA 2PLSA 3AM9A 4JB1A 1I19A 3PQBA 1AHUA 5AWVA 1DZNA 5I1WA 4BC9A 3BW7A 3NVYB 4EC3A 2BVGA 4O95A 5L6GA 1VDVA 3S1CA 5FXFA 3KJMA 3SR6B 3EJDB 4ML8A 1V97A 2GQUA 4HG0A 3S1FA 1N60C 1W1RA 2VAOA 3NVZB 2VFRA 3FW8A 1W1QA 5G5GB 2BVFA 2Y08A 4MLAA 2AXRA 2MBRA 3D2HA 5HHZA 2E3TA 3ETRB 1RM6B 2IPIA 1W1OA 3DEDA 2UUVA 2YVSA 2Q85A 3TSJA 2GQTA 1W1JA 1DIIA 4PZFA 3S1DA 3GSYA 1E8GA 1WYGA 4UD8A 3HSUA 4PVHA 5AE1A 1HSKA 4BC7A 1W1KA 5HQXA 2OAIA 3RJ8A 5G5HB 1DIQA 4BCAA 2R2ZA 2P3HA 4PWBA 5K8EA 2VFVA 1ZXIC 2RK5A 1SB3B 1T3QC 3B9JB 3S1EA 2R8DA 4JAYA 5AE3A 4OALA 4BBYA 4PVKA 2Y3RA 1QLTA 2W54A 3W8ZA 2Y4GA 1AHVA 2I0KA 1FFVC 3FWAA 3W8XA 2W3SA 3NRZB 2VFTA 5FXPA 3C0PA 3LAEA 5AE2A 1E8FA 2PLIA 3PM9A 3JS8A 1N5XA 3I99A 2P13A 3EJBB 5D79A 3NVWB 1FFUC 3LLBA 2Q4WA 3FW9A 2WDWA 2BVHA 2NQWA 2QKNA 4PVJA 1FIQB 5FXDA 1WVFA 2Y3SA 2P4PA 3HRDC 1E0YA 5ADZA 1N63C 3FW7A 3D2DA 3EJEB 1ZR6A 4XLOA 2UUUA 3RJAA 1N5WC 3AN1A 1VAOA 3AMZA 3TSHA 1JRPA 3W8WA 4PYTA 3TX1A 1UXYA 4ZOHB 2QPMA 2EXRA 1JROA 2W3RA 1FO4A 1AHZA 1E8HA 1N61C 4PVEA 1W1SA 3DQ0A 3POPA 3VTEA 4PWCA
chains in the Genus database with same CATH topology
1N62C 1W1MA 4DNSA 3EUB3 1MBBA 5HMRA 1WVEA 2W55A 1W1LA 3NS1B 5FXEA 3D2JA 5I1VA 1QLUA 5L6FA 2VFUA 1F0XA 2O3GA 3NVVB 2VFSA 1MBTA 2PLSA 3AM9A 4JB1A 1I19A 3PQBA 1AHUA 5AWVA 1DZNA 5I1WA 4BC9A 3BW7A 3NVYB 4EC3A 2BVGA 4O95A 5L6GA 1VDVA 3S1CA 5FXFA 3KJMA 3SR6B 4ML8A 1V97A 2GQUA 4HG0A 3S1FA 1N60C 1W1RA 2VAOA 3NVZB 2VFRA 3FW8A 1W1QA 5G5GB 2BVFA 2Y08A 4MLAA 2AXRA 2MBRA 3D2HA 5HHZA 2E3TA 3ETRB 1RM6B 2IPIA 1W1OA 3DEDA 2UUVA 2YVSA 2Q85A 3TSJA 2GQTA 1W1JA 1DIIA 4PZFA 3S1DA 3GSYA 1E8GA 1WYGA 4UD8A 3HSUA 4PVHA 5AE1A 1HSKA 4BC7A 1W1KA 5HQXA 2OAIA 3RJ8A 5G5HB 1DIQA 4BCAA 2R2ZA 2P3HA 4PWBA 5K8EA 2VFVA 1ZXIC 2RK5A 1SB3B 1T3QC 3B9JB 3S1EA 2R8DA 4JAYA 5AE3A 4OALA 4BBYA 4PVKA 2Y3RA 1QLTA 2W54A 3W8ZA 2Y4GA 1AHVA 2I0KA 1FFVC 3FWAA 3W8XA 2W3SA 3NRZB 2VFTA 5FXPA 3C0PA 3LAEA 5AE2A 1E8FA 2PLIA 3PM9A 3JS8A 1N5XA 3I99A 2P13A 5D79A 3NVWB 1FFUC 3LLBA 2Q4WA 3FW9A 2WDWA 2BVHA 2NQWA 2QKNA 4PVJA 1FIQB 5FXDA 1WVFA 2Y3SA 2P4PA 3HRDC 1E0YA 5ADZA 1N63C 3FW7A 3D2DA 4XLOA 1ZR6A 2UUUA 3RJAA 1N5WC 3AN1A 1VAOA 3AMZA 3TSHA 1JRPA 3W8WA 4PYTA 3TX1A 1UXYA 4ZOHB 2QPMA 2EXRA 1JROA 2W3RA 1FO4A 1AHZA 1E8HA 1N61C 4PVEA 1W1SA 3DQ0A 3POPA 3VTEA 4PWCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1N62 C;  1W1M A;  4DNS A;  3EUB 3;  1MBB A;  5HMR A;  1WVE A;  2W55 A;  1W1L A;  3NS1 B;  5FXE A;  3D2J A;  5I1V A;  1QLU A;  5L6F A;  2VFU A;  1F0X A;  2O3G A;  3NVV B;  2VFS A;  1MBT A;  2PLS A;  3AM9 A;  4JB1 A;  1I19 A;  3PQB A;  1AHU A;  5AWV A;  1DZN A;  5I1W A;  4BC9 A;  3BW7 A;  3NVY B;  4EC3 A;  2BVG A;  4O95 A;  5L6G A;  1VDV A;  3S1C A;  5FXF A;  3KJM A;  3SR6 B;  4ML8 A;  1V97 A;  2GQU A;  4HG0 A;  3S1F A;  1N60 C;  1W1R A;  2VAO A;  3NVZ B;  2VFR A;  3FW8 A;  1W1Q A;  5G5G B;  2BVF A;  2Y08 A;  4MLA A;  2AXR A;  2MBR A;  3D2H A;  5HHZ A;  2E3T A;  3ETR B;  1RM6 B;  2IPI A;  1W1O A;  3DED A;  2YVS A;  2Q85 A;  3TSJ A;  2GQT A;  1W1J A;  1DII A;  4PZF A;  3S1D A;  3GSY A;  1E8G A;  1WYG A;  4UD8 A;  3HSU A;  4PVH A;  5AE1 A;  1HSK A;  4BC7 A;  1W1K A;  5HQX A;  2OAI A;  3RJ8 A;  5G5H B;  1DIQ A;  4BCA A;  2R2Z A;  2P3H A;  4PWB A;  5K8E A;  2VFV A;  1ZXI C;  2RK5 A;  1SB3 B;  1T3Q C;  3B9J B;  3S1E A;  2R8D A;  4JAY A;  5AE3 A;  4OAL A;  4BBY A;  4PVK A;  2Y3R A;  1QLT A;  2W54 A;  3W8Z A;  2Y4G A;  1AHV A;  2I0K A;  1FFV C;  3FWA A;  3W8X A;  2W3S A;  3NRZ B;  2VFT A;  5FXP A;  3C0P A;  3LAE A;  5AE2 A;  1E8F A;  2PLI A;  3PM9 A;  3JS8 A;  1N5X A;  3I99 A;  2P13 A;  5D79 A;  3NVW B;  1FFU C;  3LLB A;  2Q4W A;  3FW9 A;  2WDW A;  2BVH A;  2NQW A;  2QKN A;  4PVJ A;  1FIQ B;  5FXD A;  1WVF A;  2Y3S A;  2P4P A;  3HRD C;  1E0Y A;  5ADZ A;  1N63 C;  3FW7 A;  3D2D A;  4XLO A;  1ZR6 A;  3RJA A;  1N5W C;  3AN1 A;  1VAO A;  3AMZ A;  3TSH A;  1JRP A;  3W8W A;  4PYT A;  3TX1 A;  1UXY A;  4ZOH B;  2QPM A;  2EXR A;  1JRO A;  2W3R A;  1FO4 A;  1AHZ A;  1E8H A;  1N61 C;  4PVE A;  1W1S A;  3DQ0 A;  3POP A;  3VTE A;  4PWC A; 
#chains in the Genus database with same CATH topology
 1N62 C;  1W1M A;  4DNS A;  3EUB 3;  1MBB A;  5HMR A;  1WVE A;  2W55 A;  1W1L A;  3NS1 B;  5FXE A;  3D2J A;  5I1V A;  1QLU A;  5L6F A;  2VFU A;  1F0X A;  3NVV B;  2O3G A;  2VFS A;  1MBT A;  2PLS A;  3AM9 A;  4JB1 A;  1I19 A;  3PQB A;  1AHU A;  5AWV A;  1DZN A;  5I1W A;  4BC9 A;  3BW7 A;  3NVY B;  4EC3 A;  2BVG A;  4O95 A;  5L6G A;  1VDV A;  3S1C A;  5FXF A;  3KJM A;  3SR6 B;  3EJD B;  4ML8 A;  1V97 A;  2GQU A;  4HG0 A;  3S1F A;  1N60 C;  1W1R A;  2VAO A;  3NVZ B;  2VFR A;  3FW8 A;  1W1Q A;  5G5G B;  2BVF A;  2Y08 A;  4MLA A;  2AXR A;  2MBR A;  3D2H A;  5HHZ A;  2E3T A;  3ETR B;  1RM6 B;  2IPI A;  1W1O A;  3DED A;  2UUV A;  2YVS A;  2Q85 A;  3TSJ A;  2GQT A;  1W1J A;  1DII A;  4PZF A;  3S1D A;  3GSY A;  1E8G A;  1WYG A;  4UD8 A;  3HSU A;  4PVH A;  5AE1 A;  1HSK A;  4BC7 A;  1W1K A;  5HQX A;  2OAI A;  3RJ8 A;  5G5H B;  1DIQ A;  4BCA A;  2R2Z A;  2P3H A;  4PWB A;  5K8E A;  2VFV A;  1ZXI C;  2RK5 A;  1SB3 B;  1T3Q C;  3B9J B;  3S1E A;  2R8D A;  4JAY A;  5AE3 A;  4OAL A;  4BBY A;  4PVK A;  2Y3R A;  1QLT A;  2W54 A;  3W8Z A;  2Y4G A;  1AHV A;  2I0K A;  1FFV C;  3FWA A;  3W8X A;  2W3S A;  3NRZ B;  2VFT A;  5FXP A;  3C0P A;  3LAE A;  5AE2 A;  1E8F A;  2PLI A;  3PM9 A;  3JS8 A;  1N5X A;  3I99 A;  2P13 A;  3EJB B;  5D79 A;  3NVW B;  1FFU C;  3LLB A;  2Q4W A;  3FW9 A;  2WDW A;  2BVH A;  2NQW A;  2QKN A;  4PVJ A;  1FIQ B;  5FXD A;  1WVF A;  2Y3S A;  2P4P A;  3HRD C;  1E0Y A;  5ADZ A;  1N63 C;  3FW7 A;  3D2D A;  3EJE B;  1ZR6 A;  4XLO A;  2UUU A;  3RJA A;  1N5W C;  3AN1 A;  1VAO A;  3AMZ A;  3TSH A;  1JRP A;  3W8W A;  4PYT A;  3TX1 A;  1UXY A;  4ZOH B;  2QPM A;  2EXR A;  1JRO A;  2W3R A;  1FO4 A;  1AHZ A;  1E8H A;  1N61 C;  4PVE A;  1W1S A;  3DQ0 A;  3POP A;  3VTE A;  4PWC A; 
#chains in the Genus database with same CATH homology
 1N62 C;  1W1M A;  4DNS A;  3EUB 3;  1MBB A;  5HMR A;  1WVE A;  2W55 A;  1W1L A;  3NS1 B;  5FXE A;  3D2J A;  5I1V A;  1QLU A;  5L6F A;  2VFU A;  1F0X A;  2O3G A;  3NVV B;  2VFS A;  1MBT A;  2PLS A;  3AM9 A;  4JB1 A;  1I19 A;  3PQB A;  1AHU A;  5AWV A;  1DZN A;  5I1W A;  4BC9 A;  3BW7 A;  3NVY B;  4EC3 A;  2BVG A;  4O95 A;  5L6G A;  1VDV A;  3S1C A;  5FXF A;  3KJM A;  3SR6 B;  4ML8 A;  1V97 A;  2GQU A;  4HG0 A;  3S1F A;  1N60 C;  1W1R A;  2VAO A;  3NVZ B;  2VFR A;  3FW8 A;  1W1Q A;  5G5G B;  2BVF A;  2Y08 A;  4MLA A;  2AXR A;  2MBR A;  3D2H A;  5HHZ A;  2E3T A;  3ETR B;  1RM6 B;  2IPI A;  1W1O A;  3DED A;  2UUV A;  2YVS A;  2Q85 A;  3TSJ A;  2GQT A;  1W1J A;  1DII A;  4PZF A;  3S1D A;  3GSY A;  1E8G A;  1WYG A;  4UD8 A;  3HSU A;  4PVH A;  5AE1 A;  1HSK A;  4BC7 A;  1W1K A;  5HQX A;  2OAI A;  3RJ8 A;  5G5H B;  1DIQ A;  4BCA A;  2R2Z A;  2P3H A;  4PWB A;  5K8E A;  2VFV A;  1ZXI C;  2RK5 A;  1SB3 B;  1T3Q C;  3B9J B;  3S1E A;  2R8D A;  4JAY A;  5AE3 A;  4OAL A;  4BBY A;  4PVK A;  2Y3R A;  1QLT A;  2W54 A;  3W8Z A;  2Y4G A;  1AHV A;  2I0K A;  1FFV C;  3FWA A;  3W8X A;  2W3S A;  3NRZ B;  2VFT A;  5FXP A;  3C0P A;  3LAE A;  5AE2 A;  1E8F A;  2PLI A;  3PM9 A;  3JS8 A;  1N5X A;  3I99 A;  2P13 A;  5D79 A;  3NVW B;  1FFU C;  3LLB A;  2Q4W A;  3FW9 A;  2WDW A;  2BVH A;  2NQW A;  2QKN A;  4PVJ A;  1FIQ B;  5FXD A;  1WVF A;  2Y3S A;  2P4P A;  3HRD C;  1E0Y A;  5ADZ A;  1N63 C;  3FW7 A;  3D2D A;  4XLO A;  1ZR6 A;  2UUU A;  3RJA A;  1N5W C;  3AN1 A;  1VAO A;  3AMZ A;  3TSH A;  1JRP A;  3W8W A;  4PYT A;  3TX1 A;  1UXY A;  4ZOH B;  2QPM A;  2EXR A;  1JRO A;  2W3R A;  1FO4 A;  1AHZ A;  1E8H A;  1N61 C;  4PVE A;  1W1S A;  3DQ0 A;  3POP A;  3VTE A;  4PWC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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