3W8XA

The complex structure of encm with trifluorotriketide
Total Genus 137
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
137
sequence length
461
structure length
461
Chain Sequence
QFPQLDPATLAAFSAAFRGELIWPSDADYDEARRIWNGTIDRRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSIKVSRRLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGLVLGGGFGWLSRKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVRGGGGNFGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLPYRALQAYSFPGAVVPDRIYTKSGYLNELSDEATDTVLEHAADIASPFTQLELLYLGGAVARVPDDATAYPNRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALAGHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLFRLNQNIPPS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
molecule keywords Putative FAD-dependent oxygenase EncM
publication title Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
pubmed doi rcsb
source organism Streptomyces maritimus
total genus 137
structure length 461
sequence length 461
chains with identical sequence B
ec nomenclature ec 1.13.12.-:
pdb deposition date 2013-03-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3w8xA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3w8xA02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3w8xA03
5L6GA 5ADZA 2Q4WA 5HMRA 4PZFA 3LLBA 1MBTA 1FFVC 3GSYA 2QPMA 5D79A 2YVSA 3NVZB 4MLAA 2I0KA 1FO4A 1VDVA 2MBRA 1N5XA 2Y4GA 2Y3RA 4JB1A 1V97A 5FXPA 3FW7A 3PM9A 4BC9A 4PVKA 1E8GA 1W1RA 3HRDC 2RK5A 3RJ8A 3FW8A 4HG0A 2VFUA 4PVJA 3ETRB 1UXYA 1VAOA 2WDWA 3PQBA 5G5HB 2W54A 1N61C 4ML8A 2E3TA 4PVHA 4BCAA 3AM9A 3C0PA 4JAYA 4DNSA 3EUB3 2BVFA 2BVGA 2Y3SA 3SR6B 1F0XA 5G5GB 2IPIA 1W1LA 1N5WC 4PWBA 5I1WA 3POPA 1MBBA 1AHUA 1WYGA 3FWAA 5L6FA 3NVYB 2VFSA 5AWVA 1E8HA 1WVFA 3S1FA 1DIIA 1HSKA 4PWCA 1DZNA 1QLTA 1W1MA 3RJAA 3HSUA 1RM6B 1N60C 4BC7A 1FIQB 1QLUA 2PLIA 3JS8A 3S1CA 1E8FA 3NS1B 2O3GA 2P4PA 4XLOA 2VAOA 2OAIA 3S1DA 3D2DA 1DIQA 1WVEA 2VFRA 1JROA 3NVWB 3W8XA 3LAEA 2VFTA 3DQ0A 2R8DA 1W1QA 1W1SA 3NRZB 2W55A 5K8EA 4ZOHB 3TX1A 4EC3A 2EXRA 3NVVB 3TSHA 3W8WA 2VFVA 3VTEA 5FXFA 3S1EA 1ZXIC 2QKNA 3W8ZA 4BBYA 1W1JA 5FXEA 5I1VA 4UD8A 5AE1A 1W1OA 1W1KA 3I99A 1JRPA 4O95A 2BVHA 3B9JB 1SB3B 1I19A 2P13A 1FFUC 2GQUA 3AMZA 2W3RA 3AN1A 2Y08A 1N63C 3D2JA 5HHZA 1T3QC 2Q85A 2P3HA 2R2ZA 4PYTA 3TSJA 5HQXA 2NQWA 2GQTA 5FXDA 2PLSA 3DEDA 1AHZA 1E0YA 5AE2A 2AXRA 4PVEA 5AE3A 1ZR6A 3BW7A 3D2HA 3FW9A 1N62C 4OALA 3KJMA 1AHVA 2W3SA
chains in the Genus database with same CATH superfamily
5L6GA 5ADZA 2Q4WA 5HMRA 4PZFA 3LLBA 1MBTA 1FFVC 3GSYA 2QPMA 5D79A 3EJDB 2YVSA 3NVZB 4MLAA 2I0KA 1FO4A 1VDVA 2MBRA 1N5XA 2Y4GA 2Y3RA 4JB1A 1V97A 5FXPA 3FW7A 3PM9A 4BC9A 4PVKA 1E8GA 1W1RA 3HRDC 2RK5A 3RJ8A 3FW8A 4HG0A 2VFUA 4PVJA 3ETRB 1UXYA 1VAOA 2WDWA 3PQBA 5G5HB 2W54A 1N61C 4ML8A 2E3TA 4PVHA 4BCAA 3AM9A 3C0PA 4JAYA 4DNSA 3EUB3 2BVFA 2BVGA 2Y3SA 3SR6B 1F0XA 5G5GB 2IPIA 1W1LA 1N5WC 4PWBA 5I1WA 3POPA 1MBBA 1AHUA 1WYGA 3FWAA 5L6FA 3NVYB 2VFSA 5AWVA 1E8HA 1WVFA 3S1FA 1DIIA 1HSKA 4PWCA 1DZNA 1QLTA 1W1MA 3RJAA 3HSUA 1RM6B 1N60C 4BC7A 1FIQB 1QLUA 2PLIA 3JS8A 3S1CA 1E8FA 3NS1B 3EJEB 2O3GA 2P4PA 4XLOA 2VAOA 2OAIA 3S1DA 3D2DA 1DIQA 1WVEA 2VFRA 1JROA 3NVWB 3W8XA 3LAEA 2VFTA 3DQ0A 2R8DA 1W1QA 1W1SA 3NRZB 2W55A 5K8EA 4ZOHB 3TX1A 4EC3A 2EXRA 3NVVB 3TSHA 3W8WA 2VFVA 3VTEA 5FXFA 3S1EA 1ZXIC 2QKNA 3W8ZA 4BBYA 1W1JA 5FXEA 5I1VA 4UD8A 5AE1A 1W1OA 1W1KA 3I99A 1JRPA 4O95A 2BVHA 3B9JB 1SB3B 3EJBB 1I19A 2P13A 1FFUC 2GQUA 3AMZA 2W3RA 3AN1A 2Y08A 1N63C 3D2JA 5HHZA 1T3QC 2Q85A 2P3HA 2R2ZA 4PYTA 3TSJA 5HQXA 2UUUA 2NQWA 2GQTA 5FXDA 2PLSA 3DEDA 1AHZA 1E0YA 5AE2A 2AXRA 4PVEA 5AE3A 1ZR6A 3BW7A 3D2HA 3FW9A 1N62C 4OALA 3KJMA 1AHVA 2UUVA 2W3SA
chains in the Genus database with same CATH topology
5L6GA 5ADZA 2Q4WA 5HMRA 4PZFA 3LLBA 1MBTA 1FFVC 3GSYA 2QPMA 5D79A 2YVSA 3NVZB 4MLAA 2I0KA 1FO4A 1VDVA 2MBRA 1N5XA 2Y4GA 2Y3RA 4JB1A 1V97A 5FXPA 3FW7A 3PM9A 4BC9A 4PVKA 1E8GA 1W1RA 3HRDC 2RK5A 3RJ8A 3FW8A 4HG0A 2VFUA 4PVJA 3ETRB 1UXYA 1VAOA 2WDWA 3PQBA 5G5HB 2W54A 1N61C 4ML8A 2E3TA 4PVHA 4BCAA 3AM9A 3C0PA 4JAYA 4DNSA 3EUB3 2BVFA 2BVGA 2Y3SA 3SR6B 1F0XA 5G5GB 2IPIA 1W1LA 1N5WC 4PWBA 5I1WA 3POPA 1MBBA 1AHUA 1WYGA 3FWAA 5L6FA 3NVYB 2VFSA 5AWVA 1E8HA 1WVFA 3S1FA 1DIIA 1HSKA 4PWCA 1DZNA 1QLTA 1W1MA 3RJAA 3HSUA 1RM6B 1N60C 4BC7A 1FIQB 1QLUA 2PLIA 3JS8A 3S1CA 1E8FA 3NS1B 2O3GA 2P4PA 4XLOA 2VAOA 2OAIA 3S1DA 3D2DA 1DIQA 1WVEA 2VFRA 1JROA 3NVWB 3W8XA 3LAEA 2VFTA 3DQ0A 2R8DA 1W1QA 1W1SA 3NRZB 2W55A 5K8EA 4ZOHB 3TX1A 4EC3A 2EXRA 3NVVB 3TSHA 3W8WA 2VFVA 3VTEA 5FXFA 3S1EA 1ZXIC 2QKNA 3W8ZA 4BBYA 1W1JA 5FXEA 5I1VA 4UD8A 5AE1A 1W1OA 1W1KA 3I99A 1JRPA 4O95A 2BVHA 3B9JB 1SB3B 1I19A 2P13A 1FFUC 2GQUA 3AMZA 2W3RA 3AN1A 2Y08A 1N63C 3D2JA 5HHZA 1T3QC 2Q85A 2P3HA 2R2ZA 4PYTA 3TSJA 5HQXA 2UUUA 2NQWA 2GQTA 5FXDA 2PLSA 3DEDA 1AHZA 1E0YA 5AE2A 2AXRA 4PVEA 5AE3A 1ZR6A 3BW7A 3D2HA 3FW9A 1N62C 4OALA 3KJMA 1AHVA 2UUVA 2W3SA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5L6G A;  5ADZ A;  2Q4W A;  5HMR A;  4PZF A;  3LLB A;  1MBT A;  1FFV C;  3GSY A;  2QPM A;  5D79 A;  2YVS A;  3NVZ B;  4MLA A;  2I0K A;  1FO4 A;  1VDV A;  2MBR A;  1N5X A;  2Y4G A;  2Y3R A;  4JB1 A;  1V97 A;  5FXP A;  3FW7 A;  3PM9 A;  4BC9 A;  4PVK A;  1E8G A;  1W1R A;  3HRD C;  2RK5 A;  3RJ8 A;  3FW8 A;  4HG0 A;  2VFU A;  4PVJ A;  3ETR B;  1UXY A;  1VAO A;  2WDW A;  3PQB A;  5G5H B;  2W54 A;  1N61 C;  4ML8 A;  2E3T A;  4PVH A;  4BCA A;  3AM9 A;  3C0P A;  4JAY A;  4DNS A;  3EUB 3;  2BVF A;  2BVG A;  2Y3S A;  3SR6 B;  1F0X A;  5G5G B;  2IPI A;  1W1L A;  1N5W C;  4PWB A;  5I1W A;  3POP A;  1MBB A;  1AHU A;  1WYG A;  3FWA A;  5L6F A;  3NVY B;  2VFS A;  5AWV A;  1E8H A;  1WVF A;  3S1F A;  1DII A;  1HSK A;  4PWC A;  1DZN A;  1QLT A;  1W1M A;  3RJA A;  3HSU A;  1RM6 B;  1N60 C;  4BC7 A;  1FIQ B;  1QLU A;  2PLI A;  3JS8 A;  3S1C A;  1E8F A;  3NS1 B;  2O3G A;  2P4P A;  4XLO A;  2VAO A;  2OAI A;  3S1D A;  3D2D A;  1DIQ A;  1WVE A;  2VFR A;  1JRO A;  3NVW B;  3W8X A;  3LAE A;  2VFT A;  3DQ0 A;  2R8D A;  1W1Q A;  1W1S A;  3NRZ B;  2W55 A;  5K8E A;  4ZOH B;  3TX1 A;  4EC3 A;  2EXR A;  3NVV B;  3TSH A;  3W8W A;  2VFV A;  3VTE A;  5FXF A;  3S1E A;  1ZXI C;  2QKN A;  3W8Z A;  4BBY A;  1W1J A;  5FXE A;  5I1V A;  4UD8 A;  5AE1 A;  1W1O A;  1W1K A;  3I99 A;  1JRP A;  4O95 A;  2BVH A;  3B9J B;  1SB3 B;  1I19 A;  2P13 A;  1FFU C;  2GQU A;  3AMZ A;  2W3R A;  3AN1 A;  2Y08 A;  1N63 C;  3D2J A;  5HHZ A;  1T3Q C;  2Q85 A;  2P3H A;  2R2Z A;  4PYT A;  3TSJ A;  5HQX A;  2NQW A;  2GQT A;  5FXD A;  2PLS A;  3DED A;  1AHZ A;  1E0Y A;  5AE2 A;  2AXR A;  4PVE A;  5AE3 A;  1ZR6 A;  3BW7 A;  3D2H A;  3FW9 A;  1N62 C;  4OAL A;  3KJM A;  1AHV A;  2W3S A; 
#chains in the Genus database with same CATH topology
 5L6G A;  5ADZ A;  2Q4W A;  5HMR A;  4PZF A;  3LLB A;  1MBT A;  1FFV C;  3GSY A;  2QPM A;  5D79 A;  3EJD B;  2YVS A;  3NVZ B;  4MLA A;  2I0K A;  1FO4 A;  1VDV A;  2MBR A;  1N5X A;  2Y4G A;  2Y3R A;  4JB1 A;  1V97 A;  5FXP A;  3FW7 A;  3PM9 A;  4BC9 A;  4PVK A;  1E8G A;  1W1R A;  3HRD C;  2RK5 A;  3RJ8 A;  3FW8 A;  4HG0 A;  2VFU A;  4PVJ A;  3ETR B;  1UXY A;  1VAO A;  2WDW A;  3PQB A;  5G5H B;  2W54 A;  1N61 C;  4ML8 A;  2E3T A;  4PVH A;  4BCA A;  3AM9 A;  3C0P A;  4JAY A;  4DNS A;  3EUB 3;  2BVF A;  2BVG A;  2Y3S A;  3SR6 B;  1F0X A;  5G5G B;  2IPI A;  1W1L A;  1N5W C;  4PWB A;  5I1W A;  3POP A;  1MBB A;  1AHU A;  1WYG A;  3FWA A;  5L6F A;  3NVY B;  2VFS A;  5AWV A;  1E8H A;  1WVF A;  3S1F A;  1DII A;  1HSK A;  4PWC A;  1DZN A;  1QLT A;  1W1M A;  3RJA A;  3HSU A;  1RM6 B;  1N60 C;  4BC7 A;  1FIQ B;  1QLU A;  2PLI A;  3JS8 A;  3S1C A;  1E8F A;  3NS1 B;  3EJE B;  2O3G A;  2P4P A;  4XLO A;  2VAO A;  2OAI A;  3S1D A;  3D2D A;  1DIQ A;  1WVE A;  2VFR A;  1JRO A;  3NVW B;  3W8X A;  3LAE A;  2VFT A;  3DQ0 A;  2R8D A;  1W1Q A;  1W1S A;  3NRZ B;  2W55 A;  5K8E A;  4ZOH B;  3TX1 A;  4EC3 A;  2EXR A;  3NVV B;  3TSH A;  3W8W A;  2VFV A;  3VTE A;  5FXF A;  3S1E A;  1ZXI C;  2QKN A;  3W8Z A;  4BBY A;  1W1J A;  5FXE A;  5I1V A;  4UD8 A;  5AE1 A;  1W1O A;  1W1K A;  3I99 A;  1JRP A;  4O95 A;  2BVH A;  3B9J B;  1SB3 B;  3EJB B;  1I19 A;  2P13 A;  1FFU C;  2GQU A;  3AMZ A;  2W3R A;  3AN1 A;  2Y08 A;  1N63 C;  3D2J A;  5HHZ A;  1T3Q C;  2Q85 A;  2P3H A;  2R2Z A;  4PYT A;  3TSJ A;  5HQX A;  2UUU A;  2NQW A;  2GQT A;  5FXD A;  2PLS A;  3DED A;  1AHZ A;  1E0Y A;  5AE2 A;  2AXR A;  4PVE A;  5AE3 A;  1ZR6 A;  3BW7 A;  3D2H A;  3FW9 A;  1N62 C;  4OAL A;  3KJM A;  1AHV A;  2UUV A;  2W3S A; 
#chains in the Genus database with same CATH homology
 5L6G A;  5ADZ A;  2Q4W A;  5HMR A;  4PZF A;  3LLB A;  1MBT A;  1FFV C;  3GSY A;  2QPM A;  5D79 A;  2YVS A;  3NVZ B;  4MLA A;  2I0K A;  1FO4 A;  1VDV A;  2MBR A;  1N5X A;  2Y4G A;  2Y3R A;  4JB1 A;  1V97 A;  5FXP A;  3FW7 A;  3PM9 A;  4BC9 A;  4PVK A;  1E8G A;  1W1R A;  3HRD C;  2RK5 A;  3RJ8 A;  3FW8 A;  4HG0 A;  2VFU A;  4PVJ A;  3ETR B;  1UXY A;  1VAO A;  2WDW A;  3PQB A;  5G5H B;  2W54 A;  1N61 C;  4ML8 A;  2E3T A;  4PVH A;  4BCA A;  3AM9 A;  3C0P A;  4JAY A;  4DNS A;  3EUB 3;  2BVF A;  2BVG A;  2Y3S A;  3SR6 B;  1F0X A;  5G5G B;  2IPI A;  1W1L A;  1N5W C;  4PWB A;  5I1W A;  3POP A;  1MBB A;  1AHU A;  1WYG A;  3FWA A;  5L6F A;  3NVY B;  2VFS A;  5AWV A;  1E8H A;  1WVF A;  3S1F A;  1DII A;  1HSK A;  4PWC A;  1DZN A;  1QLT A;  1W1M A;  3RJA A;  3HSU A;  1RM6 B;  1N60 C;  4BC7 A;  1FIQ B;  1QLU A;  2PLI A;  3JS8 A;  3S1C A;  1E8F A;  3NS1 B;  2O3G A;  2P4P A;  4XLO A;  2VAO A;  2OAI A;  3S1D A;  3D2D A;  1DIQ A;  1WVE A;  2VFR A;  1JRO A;  3NVW B;  3W8X A;  3LAE A;  2VFT A;  3DQ0 A;  2R8D A;  1W1Q A;  1W1S A;  3NRZ B;  2W55 A;  5K8E A;  4ZOH B;  3TX1 A;  4EC3 A;  2EXR A;  3NVV B;  3TSH A;  3W8W A;  2VFV A;  3VTE A;  5FXF A;  3S1E A;  1ZXI C;  2QKN A;  3W8Z A;  4BBY A;  1W1J A;  5FXE A;  5I1V A;  4UD8 A;  5AE1 A;  1W1O A;  1W1K A;  3I99 A;  1JRP A;  4O95 A;  2BVH A;  3B9J B;  1SB3 B;  1I19 A;  2P13 A;  1FFU C;  2GQU A;  3AMZ A;  2W3R A;  3AN1 A;  2Y08 A;  1N63 C;  3D2J A;  5HHZ A;  1T3Q C;  2Q85 A;  2P3H A;  2R2Z A;  4PYT A;  3TSJ A;  5HQX A;  2UUU A;  2NQW A;  2GQT A;  5FXD A;  2PLS A;  3DED A;  1AHZ A;  1E0Y A;  5AE2 A;  2AXR A;  4PVE A;  5AE3 A;  1ZR6 A;  3BW7 A;  3D2H A;  3FW9 A;  1N62 C;  4OAL A;  3KJM A;  1AHV A;  2UUV A;  2W3S A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...