3W8XA

The complex structure of encm with trifluorotriketide
Total Genus 137
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
137
sequence length
461
structure length
461
Chain Sequence
QFPQLDPATLAAFSAAFRGELIWPSDADYDEARRIWNGTIDRRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSIKVSRRLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGLVLGGGFGWLSRKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVRGGGGNFGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLPYRALQAYSFPGAVVPDRIYTKSGYLNELSDEATDTVLEHAADIASPFTQLELLYLGGAVARVPDDATAYPNRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALAGHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLFRLNQNIPPS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Oxidoreductase
source organism Streptomyces maritimus
publication title Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
pubmed doi rcsb
molecule keywords Putative FAD-dependent oxygenase EncM
total genus 137
structure length 461
sequence length 461
chains with identical sequence B
ec nomenclature ec 1.13.12.-:
pdb deposition date 2013-03-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3w8xA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3w8xA02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 3w8xA03
3ETRB 1ZXIC 2VFUA 3RJAA 4DNSA 1N62C 1VAOA 5G5HB 1SB3B 1E0YA 5FXEA 2VAOA 3W8ZA 1WVEA 3FW9A 2PLIA 4PYTA 5AWVA 4PVJA 5I1VA 3FW8A 5L6GA 4OALA 4PVKA 1DZNA 2OAIA 2NQWA 1W1RA 3AM9A 2Y08A 2VFRA 5ADZA 3NVWB 4HG0A 1QLTA 3PM9A 1MBTA 1FFVC 5HMRA 3EUB3 3TSHA 2P3HA 1JRPA 1V97A 2MBRA 5AE3A 1AHZA 3PQBA 1N5WC 1MBBA 3D2DA 1FIQB 1N61C 1W1OA 1E8FA 2VFTA 4BBYA 2AXRA 3LAEA 4ZOHB 2Y3RA 1HSKA 2I0KA 1N5XA 2O3GA 3RJ8A 2P4PA 2WDWA 3NVVB 1I19A 2E3TA 3S1DA 2YVSA 5G5GB 3POPA 1E8GA 3JS8A 4EC3A 1WYGA 2RK5A 2W3RA 3AMZA 4XLOA 3LLBA 2EXRA 4PVHA 3FW7A 4PZFA 4UD8A 2GQTA 3S1CA 5FXDA 2BVFA 3TX1A 4MLAA 2Q4WA 2IPIA 3VTEA 4JB1A 5AE2A 1JROA 1T3QC 1FFUC 3I99A 4ML8A 5D79A 1QLUA 2P13A 1ZR6A 2QKNA 5FXFA 1W1MA 5HHZA 4JAYA 5AE1A 3NS1B 2PLSA 1FO4A 1VDVA 3DQ0A 5FXPA 3NVZB 1W1SA 3GSYA 2R2ZA 1UXYA 2QPMA 1W1QA 3D2HA 4BC9A 3TSJA 1AHVA 4PVEA 4BCAA 3DEDA 5I1WA 3NRZB 1N63C 5L6FA 4O95A 1WVFA 4PWCA 3D2JA 2Y4GA 3AN1A 2BVGA 4BC7A 3NVYB 2W54A 4PWBA 3HSUA 3S1FA 1AHUA 2Y3SA 5HQXA 2W3SA 3FWAA 3S1EA 1E8HA 3W8XA 3C0PA 2GQUA 2W55A 5K8EA 3W8WA 2R8DA 1DIQA 1F0XA 1W1JA 3BW7A 1RM6B 2BVHA 2Q85A 3KJMA 3SR6B 3HRDC 3B9JB 1W1KA 2VFVA 2VFSA 1W1LA 1N60C 1DIIA
chains in the Genus database with same CATH superfamily
3ETRB 1ZXIC 2VFUA 3RJAA 4DNSA 1N62C 1VAOA 5G5HB 1SB3B 1E0YA 5FXEA 2VAOA 3W8ZA 1WVEA 3FW9A 2PLIA 4PYTA 5AWVA 4PVJA 5I1VA 3FW8A 5L6GA 4OALA 4PVKA 1DZNA 2OAIA 2NQWA 1W1RA 3AM9A 2Y08A 2VFRA 5ADZA 3NVWB 4HG0A 1QLTA 3PM9A 1MBTA 1FFVC 5HMRA 3EUB3 3TSHA 2P3HA 1JRPA 1V97A 2MBRA 5AE3A 1AHZA 3PQBA 1N5WC 1MBBA 3D2DA 1FIQB 1N61C 1W1OA 1E8FA 2UUVA 2VFTA 4BBYA 2AXRA 3LAEA 4ZOHB 2Y3RA 1HSKA 2I0KA 1N5XA 2O3GA 3RJ8A 2P4PA 2WDWA 3NVVB 1I19A 2E3TA 3S1DA 2YVSA 3POPA 5G5GB 1E8GA 3JS8A 4EC3A 1WYGA 2RK5A 2W3RA 3AMZA 4XLOA 3LLBA 2EXRA 4PVHA 3FW7A 4PZFA 4UD8A 2GQTA 3S1CA 5FXDA 2BVFA 3TX1A 4MLAA 2Q4WA 2IPIA 3EJDB 3VTEA 4JB1A 5AE2A 1JROA 1T3QC 1FFUC 3I99A 4ML8A 5D79A 1QLUA 2P13A 1ZR6A 2QKNA 5FXFA 1W1MA 5HHZA 3EJBB 4JAYA 5AE1A 3NS1B 2PLSA 1FO4A 1VDVA 3DQ0A 5FXPA 3NVZB 1W1SA 3GSYA 2R2ZA 1UXYA 2UUUA 2QPMA 1W1QA 3D2HA 4BC9A 3TSJA 1AHVA 4PVEA 4BCAA 3DEDA 5I1WA 3NRZB 1N63C 5L6FA 4O95A 1WVFA 4PWCA 3D2JA 2Y4GA 3AN1A 2BVGA 3NVYB 4BC7A 2W54A 3EJEB 4PWBA 3HSUA 3S1FA 1AHUA 2Y3SA 5HQXA 2W3SA 3FWAA 3S1EA 1E8HA 3W8XA 3C0PA 2GQUA 2W55A 5K8EA 3W8WA 2R8DA 1DIQA 1F0XA 1W1JA 3BW7A 1RM6B 2BVHA 2Q85A 3KJMA 3SR6B 3HRDC 3B9JB 1W1KA 2VFVA 2VFSA 1W1LA 1N60C 1DIIA
chains in the Genus database with same CATH topology
3ETRB 1ZXIC 2VFUA 3RJAA 4DNSA 1N62C 1VAOA 5G5HB 1SB3B 1E0YA 5FXEA 2VAOA 3W8ZA 1WVEA 3FW9A 2PLIA 4PYTA 5AWVA 4PVJA 5I1VA 3FW8A 5L6GA 4OALA 4PVKA 1DZNA 2OAIA 2NQWA 1W1RA 3AM9A 2Y08A 2VFRA 5ADZA 3NVWB 4HG0A 1QLTA 3PM9A 1MBTA 1FFVC 5HMRA 3EUB3 3TSHA 2P3HA 1JRPA 1V97A 2MBRA 5AE3A 1AHZA 3PQBA 1N5WC 1MBBA 3D2DA 1FIQB 1N61C 1W1OA 1E8FA 2UUVA 2VFTA 4BBYA 2AXRA 3LAEA 4ZOHB 2Y3RA 1HSKA 2I0KA 1N5XA 2O3GA 3RJ8A 2P4PA 2WDWA 3NVVB 1I19A 2E3TA 3S1DA 2YVSA 3POPA 5G5GB 1E8GA 3JS8A 4EC3A 1WYGA 2RK5A 2W3RA 3AMZA 4XLOA 3LLBA 2EXRA 4PVHA 3FW7A 4PZFA 4UD8A 2GQTA 3S1CA 5FXDA 2BVFA 3TX1A 4MLAA 2Q4WA 2IPIA 3VTEA 4JB1A 5AE2A 1JROA 1T3QC 1FFUC 3I99A 4ML8A 5D79A 1QLUA 2P13A 1ZR6A 2QKNA 5FXFA 1W1MA 5HHZA 4JAYA 5AE1A 3NS1B 2PLSA 1FO4A 1VDVA 3DQ0A 5FXPA 3NVZB 1W1SA 3GSYA 2R2ZA 1UXYA 2UUUA 2QPMA 1W1QA 3D2HA 4BC9A 3TSJA 1AHVA 4PVEA 4BCAA 3DEDA 5I1WA 3NRZB 1N63C 5L6FA 4O95A 1WVFA 4PWCA 3D2JA 2Y4GA 3AN1A 2BVGA 4BC7A 3NVYB 2W54A 4PWBA 3HSUA 3S1FA 1AHUA 2Y3SA 5HQXA 2W3SA 3FWAA 3S1EA 1E8HA 3W8XA 3C0PA 2GQUA 2W55A 5K8EA 3W8WA 2R8DA 1DIQA 1F0XA 1W1JA 3BW7A 1RM6B 2BVHA 2Q85A 3KJMA 3SR6B 3HRDC 3B9JB 1W1KA 2VFVA 2VFSA 1W1LA 1N60C 1DIIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3ETR B;  1ZXI C;  2VFU A;  3RJA A;  4DNS A;  1N62 C;  1VAO A;  5G5H B;  1SB3 B;  1E0Y A;  5FXE A;  2VAO A;  3W8Z A;  1WVE A;  3FW9 A;  2PLI A;  4PYT A;  5AWV A;  4PVJ A;  5I1V A;  3FW8 A;  5L6G A;  4OAL A;  4PVK A;  1DZN A;  2OAI A;  2NQW A;  1W1R A;  3AM9 A;  2Y08 A;  2VFR A;  5ADZ A;  3NVW B;  4HG0 A;  1QLT A;  3PM9 A;  1MBT A;  1FFV C;  5HMR A;  3EUB 3;  3TSH A;  2P3H A;  1JRP A;  1V97 A;  2MBR A;  5AE3 A;  1AHZ A;  3PQB A;  1N5W C;  1MBB A;  3D2D A;  1FIQ B;  1N61 C;  1W1O A;  1E8F A;  2VFT A;  4BBY A;  2AXR A;  3LAE A;  4ZOH B;  2Y3R A;  1HSK A;  2I0K A;  1N5X A;  2O3G A;  3RJ8 A;  2P4P A;  2WDW A;  3NVV B;  1I19 A;  2E3T A;  3S1D A;  2YVS A;  5G5G B;  3POP A;  1E8G A;  3JS8 A;  4EC3 A;  1WYG A;  2RK5 A;  2W3R A;  3AMZ A;  4XLO A;  3LLB A;  2EXR A;  4PVH A;  3FW7 A;  4PZF A;  4UD8 A;  2GQT A;  3S1C A;  5FXD A;  2BVF A;  3TX1 A;  4MLA A;  2Q4W A;  2IPI A;  3VTE A;  4JB1 A;  5AE2 A;  1JRO A;  1T3Q C;  1FFU C;  3I99 A;  4ML8 A;  5D79 A;  1QLU A;  2P13 A;  1ZR6 A;  2QKN A;  5FXF A;  1W1M A;  5HHZ A;  4JAY A;  5AE1 A;  3NS1 B;  2PLS A;  1FO4 A;  1VDV A;  3DQ0 A;  5FXP A;  3NVZ B;  1W1S A;  3GSY A;  2R2Z A;  1UXY A;  2QPM A;  1W1Q A;  3D2H A;  4BC9 A;  3TSJ A;  1AHV A;  4PVE A;  4BCA A;  3DED A;  5I1W A;  3NRZ B;  1N63 C;  5L6F A;  4O95 A;  1WVF A;  4PWC A;  3D2J A;  2Y4G A;  3AN1 A;  2BVG A;  4BC7 A;  3NVY B;  2W54 A;  4PWB A;  3HSU A;  3S1F A;  1AHU A;  2Y3S A;  5HQX A;  2W3S A;  3FWA A;  3S1E A;  1E8H A;  3W8X A;  3C0P A;  2GQU A;  2W55 A;  5K8E A;  3W8W A;  2R8D A;  1DIQ A;  1F0X A;  1W1J A;  3BW7 A;  1RM6 B;  2BVH A;  2Q85 A;  3KJM A;  3SR6 B;  3HRD C;  3B9J B;  1W1K A;  2VFV A;  2VFS A;  1W1L A;  1N60 C;  1DII A; 
#chains in the Genus database with same CATH topology
 3ETR B;  1ZXI C;  2VFU A;  3RJA A;  4DNS A;  1N62 C;  1VAO A;  5G5H B;  1SB3 B;  1E0Y A;  5FXE A;  2VAO A;  3W8Z A;  1WVE A;  3FW9 A;  2PLI A;  4PYT A;  5AWV A;  4PVJ A;  5I1V A;  3FW8 A;  5L6G A;  4OAL A;  4PVK A;  1DZN A;  2OAI A;  2NQW A;  1W1R A;  3AM9 A;  2Y08 A;  2VFR A;  5ADZ A;  3NVW B;  4HG0 A;  1QLT A;  3PM9 A;  1MBT A;  1FFV C;  5HMR A;  3EUB 3;  3TSH A;  2P3H A;  1JRP A;  1V97 A;  2MBR A;  5AE3 A;  1AHZ A;  3PQB A;  1N5W C;  1MBB A;  3D2D A;  1FIQ B;  1N61 C;  1W1O A;  1E8F A;  2UUV A;  2VFT A;  4BBY A;  2AXR A;  3LAE A;  4ZOH B;  2Y3R A;  1HSK A;  2I0K A;  1N5X A;  2O3G A;  3RJ8 A;  2P4P A;  2WDW A;  3NVV B;  1I19 A;  2E3T A;  3S1D A;  2YVS A;  3POP A;  5G5G B;  1E8G A;  3JS8 A;  4EC3 A;  1WYG A;  2RK5 A;  2W3R A;  3AMZ A;  4XLO A;  3LLB A;  2EXR A;  4PVH A;  3FW7 A;  4PZF A;  4UD8 A;  2GQT A;  3S1C A;  5FXD A;  2BVF A;  3TX1 A;  4MLA A;  2Q4W A;  2IPI A;  3EJD B;  3VTE A;  4JB1 A;  5AE2 A;  1JRO A;  1T3Q C;  1FFU C;  3I99 A;  4ML8 A;  5D79 A;  1QLU A;  2P13 A;  1ZR6 A;  2QKN A;  5FXF A;  1W1M A;  5HHZ A;  3EJB B;  4JAY A;  5AE1 A;  3NS1 B;  2PLS A;  1FO4 A;  1VDV A;  3DQ0 A;  5FXP A;  3NVZ B;  1W1S A;  3GSY A;  2R2Z A;  1UXY A;  2UUU A;  2QPM A;  1W1Q A;  3D2H A;  4BC9 A;  3TSJ A;  1AHV A;  4PVE A;  4BCA A;  3DED A;  5I1W A;  3NRZ B;  1N63 C;  5L6F A;  4O95 A;  1WVF A;  4PWC A;  3D2J A;  2Y4G A;  3AN1 A;  2BVG A;  3NVY B;  4BC7 A;  2W54 A;  3EJE B;  4PWB A;  3HSU A;  3S1F A;  1AHU A;  2Y3S A;  5HQX A;  2W3S A;  3FWA A;  3S1E A;  1E8H A;  3W8X A;  3C0P A;  2GQU A;  2W55 A;  5K8E A;  3W8W A;  2R8D A;  1DIQ A;  1F0X A;  1W1J A;  3BW7 A;  1RM6 B;  2BVH A;  2Q85 A;  3KJM A;  3SR6 B;  3HRD C;  3B9J B;  1W1K A;  2VFV A;  2VFS A;  1W1L A;  1N60 C;  1DII A; 
#chains in the Genus database with same CATH homology
 3ETR B;  1ZXI C;  2VFU A;  3RJA A;  4DNS A;  1N62 C;  1VAO A;  5G5H B;  1SB3 B;  1E0Y A;  5FXE A;  2VAO A;  3W8Z A;  1WVE A;  3FW9 A;  2PLI A;  4PYT A;  5AWV A;  4PVJ A;  5I1V A;  3FW8 A;  5L6G A;  4OAL A;  4PVK A;  1DZN A;  2OAI A;  2NQW A;  1W1R A;  3AM9 A;  2Y08 A;  2VFR A;  5ADZ A;  3NVW B;  4HG0 A;  1QLT A;  3PM9 A;  1MBT A;  1FFV C;  5HMR A;  3EUB 3;  3TSH A;  2P3H A;  1JRP A;  1V97 A;  2MBR A;  5AE3 A;  1AHZ A;  3PQB A;  1N5W C;  1MBB A;  3D2D A;  1FIQ B;  1N61 C;  1W1O A;  1E8F A;  2UUV A;  2VFT A;  4BBY A;  2AXR A;  3LAE A;  4ZOH B;  2Y3R A;  1HSK A;  2I0K A;  1N5X A;  2O3G A;  3RJ8 A;  2P4P A;  2WDW A;  3NVV B;  1I19 A;  2E3T A;  3S1D A;  2YVS A;  3POP A;  5G5G B;  1E8G A;  3JS8 A;  4EC3 A;  1WYG A;  2RK5 A;  2W3R A;  3AMZ A;  4XLO A;  3LLB A;  2EXR A;  4PVH A;  3FW7 A;  4PZF A;  4UD8 A;  2GQT A;  3S1C A;  5FXD A;  2BVF A;  3TX1 A;  4MLA A;  2Q4W A;  2IPI A;  3VTE A;  4JB1 A;  5AE2 A;  1JRO A;  1T3Q C;  1FFU C;  3I99 A;  4ML8 A;  5D79 A;  1QLU A;  2P13 A;  1ZR6 A;  2QKN A;  5FXF A;  1W1M A;  5HHZ A;  4JAY A;  5AE1 A;  3NS1 B;  2PLS A;  1FO4 A;  1VDV A;  3DQ0 A;  5FXP A;  3NVZ B;  1W1S A;  3GSY A;  2R2Z A;  1UXY A;  2UUU A;  2QPM A;  1W1Q A;  3D2H A;  4BC9 A;  3TSJ A;  1AHV A;  4PVE A;  4BCA A;  3DED A;  5I1W A;  3NRZ B;  1N63 C;  5L6F A;  4O95 A;  1WVF A;  4PWC A;  3D2J A;  2Y4G A;  3AN1 A;  2BVG A;  4BC7 A;  3NVY B;  2W54 A;  4PWB A;  3HSU A;  3S1F A;  1AHU A;  2Y3S A;  5HQX A;  2W3S A;  3FWA A;  3S1E A;  1E8H A;  3W8X A;  3C0P A;  2GQU A;  2W55 A;  5K8E A;  3W8W A;  2R8D A;  1DIQ A;  1F0X A;  1W1J A;  3BW7 A;  1RM6 B;  2BVH A;  2Q85 A;  3KJM A;  3SR6 B;  3HRD C;  3B9J B;  1W1K A;  2VFV A;  2VFS A;  1W1L A;  1N60 C;  1DII A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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