2P3HA

Crystal structure of the corc_hlyc domain of a putative corynebacterium glutamicum hemolysin
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
98
structure length
98
Chain Sequence
EDITETSPDKWLIDGDTPLDEVERAIGYELPEGDYETISGLLFDHANALLKTGDVIEIPLDFEPEDYLNNTSPTQRILRITVLEVERNVPVKLALALL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure of the CorC_HlyC domain of a putative Corynebacterium glutamicum hemolysin.
rcsb
molecule tags Transport protein
source organism Corynebacterium glutamicum
molecule keywords Uncharacterized CBS domain-containing protein
total genus 20
structure length 98
sequence length 98
ec nomenclature
pdb deposition date 2007-03-08
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 2p3hA00
1W1RA 4BC7A 3LAEA 2P4PA 4MLAA 3DEDA 1JRPA 1WVFA 1DIIA 4HG0A 1N62C 2BVGA 3NVVB 3I99A 2PLIA 3NVWB 1W1OA 1W1KA 1DZNA 1SB3B 2QKNA 2VFRA 2BVHA 5FXFA 5HHZA 1FO4A 3S1EA 2YVSA 5AE3A 5G5GB 1AHUA 5FXPA 4BBYA 1N63C 4BC9A 2EXRA 5G5HB 2OAIA 2VFVA 1DIQA 3KJMA 5FXEA 1AHVA 2RK5A 2I0KA 1W1QA 2R8DA 1E8GA 5FXDA 1V97A 4O95A 4PYTA 1N61C 3W8XA 4JAYA 2W55A 3C0PA 1ZR6A 2Q4WA 1W1SA 2GQUA 2W54A 3DQ0A 3W8ZA 3EUB3 1VAOA 3PM9A 2E3TA 4ZOHB 1HSKA 2W3SA 2GQTA 2VFTA 1FFVC 3W8WA 1E0YA 1FFUC 1AHZA 2P13A 3JS8A 2O3GA 1I19A 3BW7A 5AE2A 3NVZB 1N5XA 2QPMA 2PLSA 3LLBA 4XLOA 3NRZB 4JB1A 1RM6B 1MBTA 2R2ZA 2BVFA 1N60C 2NQWA 3AMZA 3TX1A 3S1DA 2AXRA 5ADZA 5HQXA 2VAOA 1JROA 1E8HA 1VDVA 3NS1B 1N5WC 1W1JA 3HRDC 4BCAA 2P3HA 3ETRB 1WVEA 2VFUA 5AE1A 1QLUA 1W1MA 2MBRA 2W3RA 1WYGA 1MBBA 4ML8A 5HMRA 3NVYB 3AN1A 1FIQB 1W1LA 1E8FA 1QLTA 3S1CA 1F0XA 1UXYA 3AM9A 1T3QC 1ZXIC 3S1FA 3B9JB 4OALA 2Q85A 3SR6B 2VFSA
chains in the Genus database with same CATH superfamily
2Y3RA 1W1RA 4BC7A 3LAEA 4PWCA 5D79A 2UUVA 2P4PA 3POPA 4MLAA 3DEDA 1JRPA 1WVFA 1DIIA 4HG0A 1N62C 4PVHA 2BVGA 3NVVB 3I99A 2PLIA 3NVWB 1W1OA 5K8EA 1W1KA 1DZNA 1SB3B 3RJ8A 2QKNA 2VFRA 2BVHA 2Y08A 3FW8A 5FXFA 5HHZA 1FO4A 3S1EA 5I1WA 2YVSA 5AE3A 5G5GB 1AHUA 5FXPA 4BBYA 1N63C 4BC9A 2EXRA 5G5HB 2OAIA 3FW9A 2VFVA 4PWBA 3RJAA 1DIQA 3KJMA 5FXEA 1AHVA 2RK5A 2I0KA 1W1QA 4PVJA 2R8DA 1E8GA 3GSYA 5FXDA 1V97A 3FW7A 4O95A 4PYTA 1N61C 3W8XA 3FWAA 4JAYA 2W55A 3C0PA 3D2JA 1ZR6A 2Q4WA 2VFSA 1W1SA 2GQUA 2W54A 2IPIA 3TSJA 3DQ0A 3W8ZA 3EUB3 1VAOA 3PM9A 2E3TA 4ZOHB 1HSKA 2W3SA 2GQTA 2VFTA 1FFVC 2Y4GA 3W8WA 1E0YA 4EC3A 1FFUC 1AHZA 2P13A 3JS8A 2O3GA 1I19A 3BW7A 5AE2A 3NVZB 1N5XA 2QPMA 3PQBA 2PLSA 3D2DA 3LLBA 4XLOA 3NRZB 4JB1A 1RM6B 1MBTA 2R2ZA 2BVFA 1N60C 3HSUA 2NQWA 3AMZA 4PZFA 3TX1A 3S1DA 2AXRA 5ADZA 5HQXA 2VAOA 2Y3SA 1E8HA 3TSHA 1VDVA 3NS1B 1N5WC 4DNSA 1W1JA 3HRDC 4BCAA 2P3HA 3ETRB 5I1VA 1WVEA 2VFUA 5AE1A 3VTEA 1QLUA 1W1MA 2MBRA 2W3RA 4PVEA 1WYGA 1MBBA 4ML8A 5HMRA 3NVYB 3AN1A 4UD8A 2WDWA 5AWVA 1FIQB 1W1LA 1E8FA 2UUUA 4PVKA 3D2HA 1QLTA 5L6FA 3S1CA 1F0XA 1UXYA 3AM9A 1T3QC 1ZXIC 3S1FA 5L6GA 3B9JB 4OALA 2Q85A 3SR6B 1JROA
chains in the Genus database with same CATH topology
2Y3RA 1W1RA 4BC7A 3LAEA 4PWCA 5D79A 2UUVA 2P4PA 3POPA 4MLAA 3DEDA 1JRPA 1WVFA 1DIIA 4HG0A 1N62C 4PVHA 2BVGA 3NVVB 3I99A 2PLIA 3NVWB 1W1OA 5K8EA 1W1KA 1DZNA 1SB3B 3RJ8A 2QKNA 2VFRA 2BVHA 2Y08A 3FW8A 5FXFA 5HHZA 1FO4A 3S1EA 5I1WA 2YVSA 5AE3A 5G5GB 1AHUA 5FXPA 4BBYA 1N63C 4BC9A 2EXRA 5G5HB 2OAIA 3FW9A 2VFVA 4PWBA 3RJAA 1DIQA 3KJMA 5FXEA 1AHVA 2RK5A 2I0KA 1W1QA 4PVJA 2R8DA 1E8GA 3GSYA 5FXDA 1V97A 3FW7A 4O95A 4PYTA 1N61C 3W8XA 3FWAA 4JAYA 2W55A 3C0PA 3D2JA 1ZR6A 2Q4WA 2VFSA 1W1SA 2GQUA 2W54A 2IPIA 3TSJA 3DQ0A 3W8ZA 3EUB3 1VAOA 3PM9A 2E3TA 4ZOHB 1HSKA 2W3SA 2GQTA 2VFTA 1FFVC 2Y4GA 3W8WA 1E0YA 4EC3A 1FFUC 1AHZA 2P13A 3JS8A 2O3GA 1I19A 3BW7A 5AE2A 3NVZB 1N5XA 2QPMA 3PQBA 2PLSA 3D2DA 3LLBA 4XLOA 3NRZB 4JB1A 1RM6B 1MBTA 2R2ZA 2BVFA 1N60C 3HSUA 2NQWA 3AMZA 4PZFA 3TX1A 3S1DA 2AXRA 5ADZA 5HQXA 2VAOA 2Y3SA 1E8HA 3TSHA 1VDVA 3NS1B 1N5WC 4DNSA 1W1JA 3HRDC 4BCAA 2P3HA 3ETRB 5I1VA 1WVEA 2VFUA 5AE1A 3VTEA 1QLUA 1W1MA 2MBRA 2W3RA 4PVEA 1WYGA 1MBBA 4ML8A 5HMRA 3NVYB 3AN1A 4UD8A 2WDWA 5AWVA 1FIQB 1W1LA 1E8FA 2UUUA 4PVKA 3D2HA 1QLTA 5L6FA 3S1CA 1F0XA 1UXYA 3AM9A 1T3QC 1ZXIC 3S1FA 5L6GA 3B9JB 4OALA 2Q85A 3SR6B 1JROA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1W1R A;  4BC7 A;  3LAE A;  2P4P A;  4MLA A;  3DED A;  1JRP A;  1WVF A;  1DII A;  4HG0 A;  1N62 C;  2BVG A;  3NVV B;  3I99 A;  2PLI A;  3NVW B;  1W1O A;  1W1K A;  1DZN A;  1SB3 B;  2QKN A;  2VFR A;  2BVH A;  5FXF A;  5HHZ A;  1FO4 A;  3S1E A;  2YVS A;  5AE3 A;  5G5G B;  1AHU A;  5FXP A;  4BBY A;  1N63 C;  4BC9 A;  2EXR A;  5G5H B;  2OAI A;  2VFV A;  1DIQ A;  3KJM A;  5FXE A;  1AHV A;  2RK5 A;  2I0K A;  1W1Q A;  2R8D A;  1E8G A;  5FXD A;  1V97 A;  4O95 A;  4PYT A;  1N61 C;  3W8X A;  4JAY A;  2W55 A;  3C0P A;  1ZR6 A;  2Q4W A;  1W1S A;  2GQU A;  2W54 A;  3DQ0 A;  3W8Z A;  3EUB 3;  1VAO A;  3PM9 A;  2E3T A;  4ZOH B;  1HSK A;  2W3S A;  2GQT A;  2VFT A;  1FFV C;  3W8W A;  1E0Y A;  1FFU C;  1AHZ A;  2P13 A;  3JS8 A;  2O3G A;  1I19 A;  3BW7 A;  5AE2 A;  3NVZ B;  1N5X A;  2QPM A;  2PLS A;  3LLB A;  4XLO A;  3NRZ B;  4JB1 A;  1RM6 B;  1MBT A;  2R2Z A;  2BVF A;  1N60 C;  2NQW A;  3AMZ A;  3TX1 A;  3S1D A;  2AXR A;  5ADZ A;  5HQX A;  2VAO A;  1JRO A;  1E8H A;  1VDV A;  3NS1 B;  1N5W C;  1W1J A;  3HRD C;  4BCA A;  2P3H A;  3ETR B;  1WVE A;  2VFU A;  5AE1 A;  1QLU A;  1W1M A;  2MBR A;  2W3R A;  1WYG A;  1MBB A;  4ML8 A;  5HMR A;  3NVY B;  3AN1 A;  1FIQ B;  1W1L A;  1E8F A;  1QLT A;  3S1C A;  1F0X A;  1UXY A;  3AM9 A;  1T3Q C;  1ZXI C;  3S1F A;  3B9J B;  4OAL A;  2Q85 A;  3SR6 B;  2VFS A; 
#chains in the Genus database with same CATH topology
 2Y3R A;  1W1R A;  4BC7 A;  3LAE A;  4PWC A;  5D79 A;  2UUV A;  2P4P A;  3POP A;  4MLA A;  3DED A;  1JRP A;  1WVF A;  1DII A;  4HG0 A;  1N62 C;  4PVH A;  2BVG A;  3NVV B;  3I99 A;  2PLI A;  3NVW B;  1W1O A;  5K8E A;  1W1K A;  1DZN A;  1SB3 B;  3RJ8 A;  2QKN A;  2VFR A;  2BVH A;  2Y08 A;  3FW8 A;  5FXF A;  5HHZ A;  1FO4 A;  3S1E A;  5I1W A;  2YVS A;  5AE3 A;  5G5G B;  1AHU A;  5FXP A;  4BBY A;  1N63 C;  4BC9 A;  2EXR A;  5G5H B;  2OAI A;  3FW9 A;  2VFV A;  4PWB A;  3RJA A;  1DIQ A;  3KJM A;  5FXE A;  1AHV A;  2RK5 A;  2I0K A;  1W1Q A;  4PVJ A;  2R8D A;  1E8G A;  3GSY A;  5FXD A;  1V97 A;  3FW7 A;  4O95 A;  4PYT A;  1N61 C;  3W8X A;  3FWA A;  4JAY A;  2W55 A;  3C0P A;  3D2J A;  1ZR6 A;  2Q4W A;  2VFS A;  1W1S A;  2GQU A;  2W54 A;  2IPI A;  3TSJ A;  3DQ0 A;  3W8Z A;  3EUB 3;  1VAO A;  3PM9 A;  2E3T A;  4ZOH B;  1HSK A;  2W3S A;  2GQT A;  2VFT A;  1FFV C;  2Y4G A;  3W8W A;  1E0Y A;  4EC3 A;  1FFU C;  1AHZ A;  2P13 A;  3JS8 A;  2O3G A;  1I19 A;  3BW7 A;  5AE2 A;  3NVZ B;  1N5X A;  2QPM A;  3PQB A;  2PLS A;  3D2D A;  3LLB A;  4XLO A;  3NRZ B;  4JB1 A;  1RM6 B;  1MBT A;  2R2Z A;  2BVF A;  1N60 C;  3HSU A;  2NQW A;  3AMZ A;  4PZF A;  3TX1 A;  3S1D A;  2AXR A;  5ADZ A;  5HQX A;  2VAO A;  2Y3S A;  1E8H A;  3TSH A;  1VDV A;  3NS1 B;  1N5W C;  4DNS A;  1W1J A;  3HRD C;  4BCA A;  2P3H A;  3ETR B;  5I1V A;  1WVE A;  2VFU A;  5AE1 A;  3VTE A;  1QLU A;  1W1M A;  2MBR A;  2W3R A;  4PVE A;  1WYG A;  1MBB A;  4ML8 A;  5HMR A;  3NVY B;  3AN1 A;  4UD8 A;  2WDW A;  5AWV A;  1FIQ B;  1W1L A;  1E8F A;  2UUU A;  4PVK A;  3D2H A;  1QLT A;  5L6F A;  3S1C A;  1F0X A;  1UXY A;  3AM9 A;  1T3Q C;  1ZXI C;  3S1F A;  5L6G A;  3B9J B;  4OAL A;  2Q85 A;  3SR6 B;  1JRO A; 
#chains in the Genus database with same CATH homology
 2Y3R A;  1W1R A;  4BC7 A;  3LAE A;  4PWC A;  5D79 A;  2UUV A;  2P4P A;  3POP A;  4MLA A;  3DED A;  1JRP A;  1WVF A;  1DII A;  4HG0 A;  1N62 C;  4PVH A;  2BVG A;  3NVV B;  3I99 A;  2PLI A;  3NVW B;  1W1O A;  5K8E A;  1W1K A;  1DZN A;  1SB3 B;  3RJ8 A;  2QKN A;  2VFR A;  2BVH A;  2Y08 A;  3FW8 A;  5FXF A;  5HHZ A;  1FO4 A;  3S1E A;  5I1W A;  2YVS A;  5AE3 A;  5G5G B;  1AHU A;  5FXP A;  4BBY A;  1N63 C;  4BC9 A;  2EXR A;  5G5H B;  2OAI A;  3FW9 A;  2VFV A;  4PWB A;  3RJA A;  1DIQ A;  3KJM A;  5FXE A;  1AHV A;  2RK5 A;  2I0K A;  1W1Q A;  4PVJ A;  2R8D A;  1E8G A;  3GSY A;  5FXD A;  1V97 A;  3FW7 A;  4O95 A;  4PYT A;  1N61 C;  3W8X A;  3FWA A;  4JAY A;  2W55 A;  3C0P A;  3D2J A;  1ZR6 A;  2Q4W A;  2VFS A;  1W1S A;  2GQU A;  2W54 A;  2IPI A;  3TSJ A;  3DQ0 A;  3W8Z A;  3EUB 3;  1VAO A;  3PM9 A;  2E3T A;  4ZOH B;  1HSK A;  2W3S A;  2GQT A;  2VFT A;  1FFV C;  2Y4G A;  3W8W A;  1E0Y A;  4EC3 A;  1FFU C;  1AHZ A;  2P13 A;  3JS8 A;  2O3G A;  1I19 A;  3BW7 A;  5AE2 A;  3NVZ B;  1N5X A;  2QPM A;  3PQB A;  2PLS A;  3D2D A;  3LLB A;  4XLO A;  3NRZ B;  4JB1 A;  1RM6 B;  1MBT A;  2R2Z A;  2BVF A;  1N60 C;  3HSU A;  2NQW A;  3AMZ A;  4PZF A;  3TX1 A;  3S1D A;  2AXR A;  5ADZ A;  5HQX A;  2VAO A;  2Y3S A;  1E8H A;  3TSH A;  1VDV A;  3NS1 B;  1N5W C;  4DNS A;  1W1J A;  3HRD C;  4BCA A;  2P3H A;  3ETR B;  5I1V A;  1WVE A;  2VFU A;  5AE1 A;  3VTE A;  1QLU A;  1W1M A;  2MBR A;  2W3R A;  4PVE A;  1WYG A;  1MBB A;  4ML8 A;  5HMR A;  3NVY B;  3AN1 A;  4UD8 A;  2WDW A;  5AWV A;  1FIQ B;  1W1L A;  1E8F A;  2UUU A;  4PVK A;  3D2H A;  1QLT A;  5L6F A;  3S1C A;  1F0X A;  1UXY A;  3AM9 A;  1T3Q C;  1ZXI C;  3S1F A;  5L6G A;  3B9J B;  4OAL A;  2Q85 A;  3SR6 B;  1JRO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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