2P3HA

Crystal structure of the corc_hlyc domain of a putative corynebacterium glutamicum hemolysin
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
98
structure length
98
Chain Sequence
EDITETSPDKWLIDGDTPLDEVERAIGYELPEGDYETISGLLFDHANALLKTGDVIEIPLDFEPEDYLNNTSPTQRILRITVLEVERNVPVKLALALL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Uncharacterized CBS domain-containing protein
publication title Structure of the CorC_HlyC domain of a putative Corynebacterium glutamicum hemolysin.
rcsb
source organism Corynebacterium glutamicum
total genus 20
structure length 98
sequence length 98
ec nomenclature
pdb deposition date 2007-03-08
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 2p3hA00
3W8ZA 4BC7A 2RK5A 1W1JA 1N61C 4HG0A 1FO4A 3AM9A 3DQ0A 1AHVA 1F0XA 3W8XA 2QKNA 5G5GB 1I19A 1JROA 5FXFA 1W1SA 2P13A 1W1QA 3S1FA 2W54A 1VDVA 3AMZA 3HRDC 3KJMA 1DIIA 2P4PA 2R8DA 4ML8A 1W1OA 3LLBA 1WVFA 1AHZA 1N60C 1JRPA 1V97A 5FXDA 5G5HB 3W8WA 1N62C 3I99A 1ZXIC 2VFTA 2VFRA 2E3TA 3AN1A 5AE3A 1HSKA 3ETRB 2W55A 3NVYB 1T3QC 1DZNA 2Q85A 2P3HA 4BCAA 3EUB3 1RM6B 2MBRA 3NS1B 2BVFA 3JS8A 5FXEA 2VAOA 2VFVA 5ADZA 1QLTA 1DIQA 2NQWA 4JB1A 4PYTA 3B9JB 4O95A 4BC9A 3NVWB 2GQTA 2QPMA 2VFUA 5HHZA 2BVHA 2R2ZA 4BBYA 5HMRA 4ZOHB 3PM9A 1FIQB 1WYGA 4MLAA 1VAOA 3LAEA 3NVZB 1E8FA 5AE2A 1WVEA 1ZR6A 3SR6B 1FFUC 1UXYA 1E0YA 2YVSA 3BW7A 3NVVB 1MBTA 3S1DA 2GQUA 5FXPA 1SB3B 1N5WC 2OAIA 2PLSA 2W3RA 1AHUA 1W1RA 4XLOA 3S1EA 2O3GA 3NRZB 3TX1A 1E8GA 3S1CA 2BVGA 1N63C 1W1MA 2VFSA 4JAYA 1W1LA 2W3SA 2EXRA 1FFVC 1W1KA 2AXRA 2Q4WA 1MBBA 3DEDA 5HQXA 1QLUA 1N5XA 3C0PA 5AE1A 2PLIA 4OALA 2I0KA 1E8HA
chains in the Genus database with same CATH superfamily
3W8ZA 4BC7A 2Y3SA 3D2DA 2RK5A 1W1JA 1N61C 4HG0A 3TSHA 1FO4A 3AM9A 3DQ0A 5K8EA 1AHVA 1F0XA 3W8XA 2QKNA 2Y3RA 1I19A 5G5GB 1JROA 5FXFA 1W1SA 2P13A 3FW9A 1W1QA 3S1FA 2W54A 1VDVA 3AMZA 3HRDC 3KJMA 4PVKA 1DIIA 2P4PA 2R8DA 4ML8A 1W1OA 3LLBA 4PVHA 1WVFA 1AHZA 1N60C 1JRPA 3D2JA 3FWAA 5I1WA 1V97A 5FXDA 5G5HB 4PWBA 3W8WA 1N62C 3I99A 1ZXIC 4UD8A 5AWVA 2UUUA 2VFTA 2VFRA 2E3TA 4PZFA 3AN1A 5L6FA 5AE3A 1HSKA 3ETRB 2W55A 2UUVA 3NVYB 1T3QC 1DZNA 2Q85A 3FW7A 2P3HA 4DNSA 5I1VA 4BCAA 3EUB3 1RM6B 2MBRA 3FW8A 3NS1B 2BVFA 3JS8A 5FXEA 2VAOA 2VFVA 3GSYA 4EC3A 5ADZA 1QLTA 1DIQA 2NQWA 4JB1A 4PYTA 3B9JB 4O95A 4BC9A 3NVWB 2GQTA 2QPMA 2VFUA 2WDWA 5HHZA 3RJ8A 2BVHA 2R2ZA 4BBYA 4PVEA 4ZOHB 3PM9A 5HMRA 1FIQB 1WYGA 4MLAA 1VAOA 3LAEA 3NVZB 1E8FA 5AE2A 1WVEA 1ZR6A 4PWCA 3SR6B 3VTEA 1FFUC 1UXYA 1E0YA 2YVSA 3PQBA 3BW7A 3NVVB 1MBTA 3S1DA 2GQUA 5FXPA 1SB3B 1N5WC 2OAIA 2PLSA 3POPA 2W3RA 1AHUA 1W1RA 4XLOA 3S1EA 2O3GA 2Y08A 3NRZB 3TX1A 1E8GA 5D79A 3S1CA 2BVGA 1N63C 1W1MA 2VFSA 3TSJA 4JAYA 1W1LA 2IPIA 2W3SA 2EXRA 1FFVC 1W1KA 2AXRA 2Q4WA 1MBBA 3D2HA 3HSUA 3RJAA 3DEDA 5HQXA 4PVJA 1QLUA 1N5XA 2Y4GA 3C0PA 5AE1A 2PLIA 5L6GA 4OALA 2I0KA 1E8HA
chains in the Genus database with same CATH topology
3W8ZA 4BC7A 2Y3SA 3D2DA 2RK5A 1W1JA 1N61C 4HG0A 3TSHA 1FO4A 3AM9A 3DQ0A 5K8EA 1AHVA 1F0XA 3W8XA 2QKNA 2Y3RA 1I19A 5G5GB 1JROA 5FXFA 1W1SA 2P13A 3FW9A 1W1QA 3S1FA 2W54A 1VDVA 3AMZA 3HRDC 3KJMA 4PVKA 1DIIA 2P4PA 2R8DA 4ML8A 1W1OA 3LLBA 4PVHA 1WVFA 1AHZA 1N60C 1JRPA 3D2JA 3FWAA 5I1WA 1V97A 5FXDA 5G5HB 4PWBA 3W8WA 1N62C 3I99A 1ZXIC 4UD8A 5AWVA 2UUUA 2VFTA 2VFRA 2E3TA 4PZFA 3AN1A 5L6FA 5AE3A 1HSKA 3ETRB 2W55A 2UUVA 3NVYB 1T3QC 1DZNA 2Q85A 3FW7A 2P3HA 4DNSA 5I1VA 4BCAA 3EUB3 1RM6B 2MBRA 3FW8A 3NS1B 2BVFA 3JS8A 5FXEA 2VAOA 2VFVA 3GSYA 4EC3A 5ADZA 1QLTA 1DIQA 2NQWA 4JB1A 4PYTA 3B9JB 4O95A 4BC9A 3NVWB 2GQTA 2QPMA 2VFUA 2WDWA 5HHZA 3RJ8A 2BVHA 2R2ZA 4BBYA 4PVEA 4ZOHB 3PM9A 5HMRA 1FIQB 1WYGA 4MLAA 1VAOA 3LAEA 3NVZB 1E8FA 5AE2A 1WVEA 1ZR6A 4PWCA 3SR6B 3VTEA 1FFUC 1UXYA 1E0YA 2YVSA 3PQBA 3BW7A 3NVVB 1MBTA 3S1DA 2GQUA 5FXPA 1SB3B 1N5WC 2OAIA 2PLSA 3POPA 2W3RA 1AHUA 1W1RA 4XLOA 3S1EA 2O3GA 2Y08A 3NRZB 3TX1A 1E8GA 5D79A 3S1CA 2BVGA 1N63C 1W1MA 2VFSA 3TSJA 4JAYA 1W1LA 2IPIA 2W3SA 2EXRA 1FFVC 1W1KA 2AXRA 2Q4WA 1MBBA 3D2HA 3HSUA 3RJAA 3DEDA 5HQXA 4PVJA 1QLUA 1N5XA 2Y4GA 3C0PA 5AE1A 2PLIA 5L6GA 4OALA 2I0KA 1E8HA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3W8Z A;  4BC7 A;  2RK5 A;  1W1J A;  1N61 C;  4HG0 A;  1FO4 A;  3AM9 A;  3DQ0 A;  1AHV A;  1F0X A;  3W8X A;  2QKN A;  5G5G B;  1I19 A;  1JRO A;  5FXF A;  1W1S A;  2P13 A;  1W1Q A;  3S1F A;  2W54 A;  1VDV A;  3AMZ A;  3HRD C;  3KJM A;  1DII A;  2P4P A;  2R8D A;  4ML8 A;  1W1O A;  3LLB A;  1WVF A;  1AHZ A;  1N60 C;  1JRP A;  1V97 A;  5FXD A;  5G5H B;  3W8W A;  1N62 C;  3I99 A;  1ZXI C;  2VFT A;  2VFR A;  2E3T A;  3AN1 A;  5AE3 A;  1HSK A;  3ETR B;  2W55 A;  3NVY B;  1T3Q C;  1DZN A;  2Q85 A;  2P3H A;  4BCA A;  3EUB 3;  1RM6 B;  2MBR A;  3NS1 B;  2BVF A;  3JS8 A;  5FXE A;  2VAO A;  2VFV A;  5ADZ A;  1QLT A;  1DIQ A;  2NQW A;  4JB1 A;  4PYT A;  3B9J B;  4O95 A;  4BC9 A;  3NVW B;  2GQT A;  2QPM A;  2VFU A;  5HHZ A;  2BVH A;  2R2Z A;  4BBY A;  5HMR A;  4ZOH B;  3PM9 A;  1FIQ B;  1WYG A;  4MLA A;  1VAO A;  3LAE A;  3NVZ B;  1E8F A;  5AE2 A;  1WVE A;  1ZR6 A;  3SR6 B;  1FFU C;  1UXY A;  1E0Y A;  2YVS A;  3BW7 A;  3NVV B;  1MBT A;  3S1D A;  2GQU A;  5FXP A;  1SB3 B;  1N5W C;  2OAI A;  2PLS A;  2W3R A;  1AHU A;  1W1R A;  4XLO A;  3S1E A;  2O3G A;  3NRZ B;  3TX1 A;  1E8G A;  3S1C A;  2BVG A;  1N63 C;  1W1M A;  2VFS A;  4JAY A;  1W1L A;  2W3S A;  2EXR A;  1FFV C;  1W1K A;  2AXR A;  2Q4W A;  1MBB A;  3DED A;  5HQX A;  1QLU A;  1N5X A;  3C0P A;  5AE1 A;  2PLI A;  4OAL A;  2I0K A;  1E8H A; 
#chains in the Genus database with same CATH topology
 3W8Z A;  4BC7 A;  2Y3S A;  3D2D A;  2RK5 A;  1W1J A;  1N61 C;  4HG0 A;  3TSH A;  1FO4 A;  3AM9 A;  3DQ0 A;  5K8E A;  1AHV A;  1F0X A;  3W8X A;  2QKN A;  2Y3R A;  1I19 A;  5G5G B;  1JRO A;  5FXF A;  1W1S A;  2P13 A;  3FW9 A;  1W1Q A;  3S1F A;  2W54 A;  1VDV A;  3AMZ A;  3HRD C;  3KJM A;  4PVK A;  1DII A;  2P4P A;  2R8D A;  4ML8 A;  1W1O A;  3LLB A;  4PVH A;  1WVF A;  1AHZ A;  1N60 C;  1JRP A;  3D2J A;  3FWA A;  5I1W A;  1V97 A;  5FXD A;  5G5H B;  4PWB A;  3W8W A;  1N62 C;  3I99 A;  1ZXI C;  4UD8 A;  5AWV A;  2UUU A;  2VFT A;  2VFR A;  2E3T A;  4PZF A;  3AN1 A;  5L6F A;  5AE3 A;  1HSK A;  3ETR B;  2W55 A;  2UUV A;  3NVY B;  1T3Q C;  1DZN A;  2Q85 A;  3FW7 A;  2P3H A;  4DNS A;  5I1V A;  4BCA A;  3EUB 3;  1RM6 B;  2MBR A;  3FW8 A;  3NS1 B;  2BVF A;  3JS8 A;  5FXE A;  2VAO A;  2VFV A;  3GSY A;  4EC3 A;  5ADZ A;  1QLT A;  1DIQ A;  2NQW A;  4JB1 A;  4PYT A;  3B9J B;  4O95 A;  4BC9 A;  3NVW B;  2GQT A;  2QPM A;  2VFU A;  2WDW A;  5HHZ A;  3RJ8 A;  2BVH A;  2R2Z A;  4BBY A;  4PVE A;  4ZOH B;  3PM9 A;  5HMR A;  1FIQ B;  1WYG A;  4MLA A;  1VAO A;  3LAE A;  3NVZ B;  1E8F A;  5AE2 A;  1WVE A;  1ZR6 A;  4PWC A;  3SR6 B;  3VTE A;  1FFU C;  1UXY A;  1E0Y A;  2YVS A;  3PQB A;  3BW7 A;  3NVV B;  1MBT A;  3S1D A;  2GQU A;  5FXP A;  1SB3 B;  1N5W C;  2OAI A;  2PLS A;  3POP A;  2W3R A;  1AHU A;  1W1R A;  4XLO A;  3S1E A;  2O3G A;  2Y08 A;  3NRZ B;  3TX1 A;  1E8G A;  5D79 A;  3S1C A;  2BVG A;  1N63 C;  1W1M A;  2VFS A;  3TSJ A;  4JAY A;  1W1L A;  2IPI A;  2W3S A;  2EXR A;  1FFV C;  1W1K A;  2AXR A;  2Q4W A;  1MBB A;  3D2H A;  3HSU A;  3RJA A;  3DED A;  5HQX A;  4PVJ A;  1QLU A;  1N5X A;  2Y4G A;  3C0P A;  5AE1 A;  2PLI A;  5L6G A;  4OAL A;  2I0K A;  1E8H A; 
#chains in the Genus database with same CATH homology
 3W8Z A;  4BC7 A;  2Y3S A;  3D2D A;  2RK5 A;  1W1J A;  1N61 C;  4HG0 A;  3TSH A;  1FO4 A;  3AM9 A;  3DQ0 A;  5K8E A;  1AHV A;  1F0X A;  3W8X A;  2QKN A;  2Y3R A;  1I19 A;  5G5G B;  1JRO A;  5FXF A;  1W1S A;  2P13 A;  3FW9 A;  1W1Q A;  3S1F A;  2W54 A;  1VDV A;  3AMZ A;  3HRD C;  3KJM A;  4PVK A;  1DII A;  2P4P A;  2R8D A;  4ML8 A;  1W1O A;  3LLB A;  4PVH A;  1WVF A;  1AHZ A;  1N60 C;  1JRP A;  3D2J A;  3FWA A;  5I1W A;  1V97 A;  5FXD A;  5G5H B;  4PWB A;  3W8W A;  1N62 C;  3I99 A;  1ZXI C;  4UD8 A;  5AWV A;  2UUU A;  2VFT A;  2VFR A;  2E3T A;  4PZF A;  3AN1 A;  5L6F A;  5AE3 A;  1HSK A;  3ETR B;  2W55 A;  2UUV A;  3NVY B;  1T3Q C;  1DZN A;  2Q85 A;  3FW7 A;  2P3H A;  4DNS A;  5I1V A;  4BCA A;  3EUB 3;  1RM6 B;  2MBR A;  3FW8 A;  3NS1 B;  2BVF A;  3JS8 A;  5FXE A;  2VAO A;  2VFV A;  3GSY A;  4EC3 A;  5ADZ A;  1QLT A;  1DIQ A;  2NQW A;  4JB1 A;  4PYT A;  3B9J B;  4O95 A;  4BC9 A;  3NVW B;  2GQT A;  2QPM A;  2VFU A;  2WDW A;  5HHZ A;  3RJ8 A;  2BVH A;  2R2Z A;  4BBY A;  4PVE A;  4ZOH B;  3PM9 A;  5HMR A;  1FIQ B;  1WYG A;  4MLA A;  1VAO A;  3LAE A;  3NVZ B;  1E8F A;  5AE2 A;  1WVE A;  1ZR6 A;  4PWC A;  3SR6 B;  3VTE A;  1FFU C;  1UXY A;  1E0Y A;  2YVS A;  3PQB A;  3BW7 A;  3NVV B;  1MBT A;  3S1D A;  2GQU A;  5FXP A;  1SB3 B;  1N5W C;  2OAI A;  2PLS A;  3POP A;  2W3R A;  1AHU A;  1W1R A;  4XLO A;  3S1E A;  2O3G A;  2Y08 A;  3NRZ B;  3TX1 A;  1E8G A;  5D79 A;  3S1C A;  2BVG A;  1N63 C;  1W1M A;  2VFS A;  3TSJ A;  4JAY A;  1W1L A;  2IPI A;  2W3S A;  2EXR A;  1FFV C;  1W1K A;  2AXR A;  2Q4W A;  1MBB A;  3D2H A;  3HSU A;  3RJA A;  3DED A;  5HQX A;  4PVJ A;  1QLU A;  1N5X A;  2Y4G A;  3C0P A;  5AE1 A;  2PLI A;  5L6G A;  4OAL A;  2I0K A;  1E8H A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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