2P3HA

Crystal structure of the corc_hlyc domain of a putative corynebacterium glutamicum hemolysin
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
98
structure length
98
Chain Sequence
EDITETSPDKWLIDGDTPLDEVERAIGYELPEGDYETISGLLFDHANALLKTGDVIEIPLDFEPEDYLNNTSPTQRILRITVLEVERNVPVKLALALL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Uncharacterized CBS domain-containing protein
publication title Structure of the CorC_HlyC domain of a putative Corynebacterium glutamicum hemolysin.
rcsb
source organism Corynebacterium glutamicum
molecule tags Transport protein
total genus 20
structure length 98
sequence length 98
ec nomenclature
pdb deposition date 2007-03-08
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 2p3hA00
3C0PA 1MBBA 3ETRB 3W8XA 2P3HA 3LLBA 3NS1B 2OAIA 1AHUA 1N60C 3BW7A 3DQ0A 3S1DA 1W1QA 1ZR6A 1MBTA 1F0XA 4BBYA 1AHVA 4XLOA 1FFUC 2BVHA 2QPMA 4BC7A 3AM9A 1W1MA 3SR6B 1ZXIC 3S1EA 5HMRA 2VFSA 4OALA 2E3TA 2QKNA 2BVGA 1T3QC 1N62C 1WYGA 3NVWB 2W3RA 2P13A 4O95A 4ZOHB 3HRDC 2MBRA 3NVYB 1I19A 1QLUA 1DZNA 2R8DA 2NQWA 3NVZB 5ADZA 1W1KA 2VFVA 2PLSA 3W8ZA 5AE3A 1E0YA 1W1LA 1DIQA 1WVEA 2P4PA 4JB1A 5HHZA 4PYTA 1UXYA 2VFUA 2GQTA 2AXRA 2W54A 3AN1A 5FXPA 3I99A 3W8WA 2Q85A 2BVFA 4ML8A 1W1JA 3JS8A 3KJMA 2RK5A 3AMZA 1V97A 1DIIA 1FIQB 2PLIA 1W1SA 3PM9A 1JROA 1AHZA 1E8FA 5G5HB 1RM6B 2W3SA 1HSKA 1VDVA 1E8GA 3LAEA 5G5GB 3TX1A 1QLTA 4BCAA 3S1FA 5FXEA 2VAOA 3S1CA 2YVSA 3B9JB 3NVVB 2VFTA 2Q4WA 1N5WC 1N63C 1N5XA 5AE2A 1N61C 1W1OA 2O3GA 4HG0A 5HQXA 5FXFA 2VFRA 3EUB3 5AE1A 2EXRA 1JRPA 1FFVC 2I0KA 2R2ZA 1FO4A 1VAOA 1W1RA 1E8HA 2GQUA 4JAYA 3NRZB 2W55A 3DEDA 1SB3B 4MLAA 5FXDA 4BC9A 1WVFA
chains in the Genus database with same CATH superfamily
3C0PA 5L6GA 1MBBA 3ETRB 3W8XA 2P3HA 3LLBA 3NS1B 2OAIA 1AHUA 1N60C 3BW7A 3DQ0A 3S1DA 1W1QA 3FWAA 3RJ8A 1ZR6A 3RJAA 1MBTA 5K8EA 1F0XA 4BBYA 3FW7A 1AHVA 4XLOA 1FFUC 2BVHA 2QPMA 2WDWA 4BC7A 3AM9A 1W1MA 3SR6B 3VTEA 1ZXIC 3S1EA 2Y4GA 4EC3A 5HMRA 2VFSA 3FW8A 4OALA 2E3TA 2QKNA 2BVGA 1T3QC 1N62C 1WYGA 5D79A 3NVWB 2W3RA 4PVEA 4PVKA 2P13A 4O95A 4ZOHB 3HRDC 5I1VA 2MBRA 3D2HA 3NVYB 1I19A 1QLUA 2Y3SA 1DZNA 2R8DA 5L6FA 2IPIA 2NQWA 4UD8A 3NVZB 5ADZA 1W1KA 4PVJA 2VFVA 2PLSA 3W8ZA 5AE3A 1E0YA 1W1LA 3TSJA 1DIQA 1WVEA 2P4PA 4JB1A 5HHZA 4PYTA 1UXYA 2VFUA 2GQTA 2AXRA 4PZFA 2W54A 3AN1A 5FXPA 3I99A 3D2DA 3W8WA 2Y3RA 2Q85A 2BVFA 4ML8A 1W1JA 3JS8A 3KJMA 2RK5A 3AMZA 1V97A 1DIIA 1FIQB 2PLIA 4PVHA 1W1SA 3PM9A 1JROA 1AHZA 1E8FA 4DNSA 5G5HB 1RM6B 2W3SA 2Y08A 3HSUA 5AWVA 1HSKA 1VDVA 1E8GA 3LAEA 5G5GB 3TX1A 1QLTA 4BCAA 3S1FA 5FXEA 3D2JA 2VAOA 3S1CA 3TSHA 2UUUA 2YVSA 3B9JB 3NVVB 4PWBA 2VFTA 2Q4WA 1N5WC 1N63C 1N5XA 5AE2A 1N61C 1W1OA 2O3GA 4HG0A 5HQXA 5FXFA 2VFRA 3EUB3 5AE1A 3PQBA 3FW9A 2EXRA 1JRPA 1FFVC 3POPA 2I0KA 5I1WA 2R2ZA 1FO4A 3GSYA 1VAOA 1W1RA 2UUVA 1E8HA 4PWCA 2GQUA 4JAYA 3NRZB 2W55A 3DEDA 1SB3B 4MLAA 5FXDA 4BC9A 1WVFA
chains in the Genus database with same CATH topology
3C0PA 5L6GA 1MBBA 3ETRB 3W8XA 2P3HA 3LLBA 3NS1B 2OAIA 1AHUA 1N60C 3BW7A 3DQ0A 3S1DA 1W1QA 3FWAA 3RJ8A 1ZR6A 3RJAA 1MBTA 5K8EA 1F0XA 4BBYA 3FW7A 1AHVA 4XLOA 1FFUC 2BVHA 2QPMA 2WDWA 4BC7A 3AM9A 1W1MA 3SR6B 3VTEA 1ZXIC 3S1EA 2Y4GA 4EC3A 5HMRA 2VFSA 3FW8A 4OALA 2E3TA 2QKNA 2BVGA 1T3QC 1N62C 1WYGA 5D79A 3NVWB 2W3RA 4PVEA 4PVKA 2P13A 4O95A 4ZOHB 3HRDC 5I1VA 2MBRA 3D2HA 3NVYB 1I19A 1QLUA 2Y3SA 1DZNA 2R8DA 5L6FA 2IPIA 2NQWA 4UD8A 3NVZB 5ADZA 1W1KA 4PVJA 2VFVA 2PLSA 3W8ZA 5AE3A 1E0YA 1W1LA 3TSJA 1DIQA 1WVEA 2P4PA 4JB1A 5HHZA 4PYTA 1UXYA 2VFUA 2GQTA 2AXRA 4PZFA 2W54A 3AN1A 5FXPA 3I99A 3D2DA 3W8WA 2Y3RA 2Q85A 2BVFA 4ML8A 1W1JA 3JS8A 3KJMA 2RK5A 3AMZA 1V97A 1DIIA 1FIQB 2PLIA 4PVHA 1W1SA 3PM9A 1JROA 1AHZA 1E8FA 4DNSA 5G5HB 1RM6B 2W3SA 2Y08A 3HSUA 5AWVA 1HSKA 1VDVA 1E8GA 3LAEA 5G5GB 3TX1A 1QLTA 4BCAA 3S1FA 5FXEA 3D2JA 2VAOA 3S1CA 3TSHA 2UUUA 2YVSA 3B9JB 3NVVB 4PWBA 2VFTA 2Q4WA 1N5WC 1N63C 1N5XA 5AE2A 1N61C 1W1OA 2O3GA 4HG0A 5HQXA 5FXFA 2VFRA 3EUB3 5AE1A 3PQBA 3FW9A 2EXRA 1JRPA 1FFVC 3POPA 2I0KA 5I1WA 2R2ZA 1FO4A 3GSYA 1VAOA 1W1RA 2UUVA 1E8HA 4PWCA 2GQUA 4JAYA 3NRZB 2W55A 3DEDA 1SB3B 4MLAA 5FXDA 4BC9A 1WVFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3C0P A;  1MBB A;  3ETR B;  3W8X A;  2P3H A;  3LLB A;  3NS1 B;  2OAI A;  1AHU A;  1N60 C;  3BW7 A;  3DQ0 A;  3S1D A;  1W1Q A;  1ZR6 A;  1MBT A;  1F0X A;  4BBY A;  1AHV A;  4XLO A;  1FFU C;  2BVH A;  2QPM A;  4BC7 A;  3AM9 A;  1W1M A;  3SR6 B;  1ZXI C;  3S1E A;  5HMR A;  2VFS A;  4OAL A;  2E3T A;  2QKN A;  2BVG A;  1T3Q C;  1N62 C;  1WYG A;  3NVW B;  2W3R A;  2P13 A;  4O95 A;  4ZOH B;  3HRD C;  2MBR A;  3NVY B;  1I19 A;  1QLU A;  1DZN A;  2R8D A;  2NQW A;  3NVZ B;  5ADZ A;  1W1K A;  2VFV A;  2PLS A;  3W8Z A;  5AE3 A;  1E0Y A;  1W1L A;  1DIQ A;  1WVE A;  2P4P A;  4JB1 A;  5HHZ A;  4PYT A;  1UXY A;  2VFU A;  2GQT A;  2AXR A;  2W54 A;  3AN1 A;  5FXP A;  3I99 A;  3W8W A;  2Q85 A;  2BVF A;  4ML8 A;  1W1J A;  3JS8 A;  3KJM A;  2RK5 A;  3AMZ A;  1V97 A;  1DII A;  1FIQ B;  2PLI A;  1W1S A;  3PM9 A;  1JRO A;  1AHZ A;  1E8F A;  5G5H B;  1RM6 B;  2W3S A;  1HSK A;  1VDV A;  1E8G A;  3LAE A;  5G5G B;  3TX1 A;  1QLT A;  4BCA A;  3S1F A;  5FXE A;  2VAO A;  3S1C A;  2YVS A;  3B9J B;  3NVV B;  2VFT A;  2Q4W A;  1N5W C;  1N63 C;  1N5X A;  5AE2 A;  1N61 C;  1W1O A;  2O3G A;  4HG0 A;  5HQX A;  5FXF A;  2VFR A;  3EUB 3;  5AE1 A;  2EXR A;  1JRP A;  1FFV C;  2I0K A;  2R2Z A;  1FO4 A;  1VAO A;  1W1R A;  1E8H A;  2GQU A;  4JAY A;  3NRZ B;  2W55 A;  3DED A;  1SB3 B;  4MLA A;  5FXD A;  4BC9 A;  1WVF A; 
#chains in the Genus database with same CATH topology
 3C0P A;  5L6G A;  1MBB A;  3ETR B;  3W8X A;  2P3H A;  3LLB A;  3NS1 B;  2OAI A;  1AHU A;  1N60 C;  3BW7 A;  3DQ0 A;  3S1D A;  1W1Q A;  3FWA A;  3RJ8 A;  1ZR6 A;  3RJA A;  1MBT A;  5K8E A;  1F0X A;  4BBY A;  3FW7 A;  1AHV A;  4XLO A;  1FFU C;  2BVH A;  2QPM A;  2WDW A;  4BC7 A;  3AM9 A;  1W1M A;  3SR6 B;  3VTE A;  1ZXI C;  3S1E A;  2Y4G A;  4EC3 A;  5HMR A;  2VFS A;  3FW8 A;  4OAL A;  2E3T A;  2QKN A;  2BVG A;  1T3Q C;  1N62 C;  1WYG A;  5D79 A;  3NVW B;  2W3R A;  4PVE A;  4PVK A;  2P13 A;  4O95 A;  4ZOH B;  3HRD C;  5I1V A;  2MBR A;  3D2H A;  3NVY B;  1I19 A;  1QLU A;  2Y3S A;  1DZN A;  2R8D A;  5L6F A;  2IPI A;  2NQW A;  4UD8 A;  3NVZ B;  5ADZ A;  1W1K A;  4PVJ A;  2VFV A;  2PLS A;  3W8Z A;  5AE3 A;  1E0Y A;  1W1L A;  3TSJ A;  1DIQ A;  1WVE A;  2P4P A;  4JB1 A;  5HHZ A;  4PYT A;  1UXY A;  2VFU A;  2GQT A;  2AXR A;  4PZF A;  2W54 A;  3AN1 A;  5FXP A;  3I99 A;  3D2D A;  3W8W A;  2Y3R A;  2Q85 A;  2BVF A;  4ML8 A;  1W1J A;  3JS8 A;  3KJM A;  2RK5 A;  3AMZ A;  1V97 A;  1DII A;  1FIQ B;  2PLI A;  4PVH A;  1W1S A;  3PM9 A;  1JRO A;  1AHZ A;  1E8F A;  4DNS A;  5G5H B;  1RM6 B;  2W3S A;  2Y08 A;  3HSU A;  5AWV A;  1HSK A;  1VDV A;  1E8G A;  3LAE A;  5G5G B;  3TX1 A;  1QLT A;  4BCA A;  3S1F A;  5FXE A;  3D2J A;  2VAO A;  3S1C A;  3TSH A;  2UUU A;  2YVS A;  3B9J B;  3NVV B;  4PWB A;  2VFT A;  2Q4W A;  1N5W C;  1N63 C;  1N5X A;  5AE2 A;  1N61 C;  1W1O A;  2O3G A;  4HG0 A;  5HQX A;  5FXF A;  2VFR A;  3EUB 3;  5AE1 A;  3PQB A;  3FW9 A;  2EXR A;  1JRP A;  1FFV C;  3POP A;  2I0K A;  5I1W A;  2R2Z A;  1FO4 A;  3GSY A;  1VAO A;  1W1R A;  2UUV A;  1E8H A;  4PWC A;  2GQU A;  4JAY A;  3NRZ B;  2W55 A;  3DED A;  1SB3 B;  4MLA A;  5FXD A;  4BC9 A;  1WVF A; 
#chains in the Genus database with same CATH homology
 3C0P A;  5L6G A;  1MBB A;  3ETR B;  3W8X A;  2P3H A;  3LLB A;  3NS1 B;  2OAI A;  1AHU A;  1N60 C;  3BW7 A;  3DQ0 A;  3S1D A;  1W1Q A;  3FWA A;  3RJ8 A;  1ZR6 A;  3RJA A;  1MBT A;  5K8E A;  1F0X A;  4BBY A;  3FW7 A;  1AHV A;  4XLO A;  1FFU C;  2BVH A;  2QPM A;  2WDW A;  4BC7 A;  3AM9 A;  1W1M A;  3SR6 B;  3VTE A;  1ZXI C;  3S1E A;  2Y4G A;  4EC3 A;  5HMR A;  2VFS A;  3FW8 A;  4OAL A;  2E3T A;  2QKN A;  2BVG A;  1T3Q C;  1N62 C;  1WYG A;  5D79 A;  3NVW B;  2W3R A;  4PVE A;  4PVK A;  2P13 A;  4O95 A;  4ZOH B;  3HRD C;  5I1V A;  2MBR A;  3D2H A;  3NVY B;  1I19 A;  1QLU A;  2Y3S A;  1DZN A;  2R8D A;  5L6F A;  2IPI A;  2NQW A;  4UD8 A;  3NVZ B;  5ADZ A;  1W1K A;  4PVJ A;  2VFV A;  2PLS A;  3W8Z A;  5AE3 A;  1E0Y A;  1W1L A;  3TSJ A;  1DIQ A;  1WVE A;  2P4P A;  4JB1 A;  5HHZ A;  4PYT A;  1UXY A;  2VFU A;  2GQT A;  2AXR A;  4PZF A;  2W54 A;  3AN1 A;  5FXP A;  3I99 A;  3D2D A;  3W8W A;  2Y3R A;  2Q85 A;  2BVF A;  4ML8 A;  1W1J A;  3JS8 A;  3KJM A;  2RK5 A;  3AMZ A;  1V97 A;  1DII A;  1FIQ B;  2PLI A;  4PVH A;  1W1S A;  3PM9 A;  1JRO A;  1AHZ A;  1E8F A;  4DNS A;  5G5H B;  1RM6 B;  2W3S A;  2Y08 A;  3HSU A;  5AWV A;  1HSK A;  1VDV A;  1E8G A;  3LAE A;  5G5G B;  3TX1 A;  1QLT A;  4BCA A;  3S1F A;  5FXE A;  3D2J A;  2VAO A;  3S1C A;  3TSH A;  2UUU A;  2YVS A;  3B9J B;  3NVV B;  4PWB A;  2VFT A;  2Q4W A;  1N5W C;  1N63 C;  1N5X A;  5AE2 A;  1N61 C;  1W1O A;  2O3G A;  4HG0 A;  5HQX A;  5FXF A;  2VFR A;  3EUB 3;  5AE1 A;  3PQB A;  3FW9 A;  2EXR A;  1JRP A;  1FFV C;  3POP A;  2I0K A;  5I1W A;  2R2Z A;  1FO4 A;  3GSY A;  1VAO A;  1W1R A;  2UUV A;  1E8H A;  4PWC A;  2GQU A;  4JAY A;  3NRZ B;  2W55 A;  3DED A;  1SB3 B;  4MLA A;  5FXD A;  4BC9 A;  1WVF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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