2P3HA

Crystal structure of the corc_hlyc domain of a putative corynebacterium glutamicum hemolysin
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
98
structure length
98
Chain Sequence
EDITETSPDKWLIDGDTPLDEVERAIGYELPEGDYETISGLLFDHANALLKTGDVIEIPLDFEPEDYLNNTSPTQRILRITVLEVERNVPVKLALALL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Uncharacterized CBS domain-containing protein
publication title Structure of the CorC_HlyC domain of a putative Corynebacterium glutamicum hemolysin.
rcsb
source organism Corynebacterium glutamicum
total genus 20
structure length 98
sequence length 98
ec nomenclature
pdb deposition date 2007-03-08
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 2p3hA00
4JB1A 1W1JA 1VDVA 5G5GB 2GQUA 1FFUC 1QLTA 3W8XA 4BC7A 3B9JB 3HRDC 1ZR6A 1FFVC 2RK5A 1N5WC 4PYTA 3S1DA 3PM9A 2YVSA 3W8ZA 2R8DA 1W1RA 4XLOA 3KJMA 3JS8A 4BCAA 2O3GA 1W1SA 2QPMA 1AHZA 1N60C 1E8GA 2EXRA 4ZOHB 3S1EA 1DIQA 3S1FA 1V97A 1W1LA 3NRZB 4BC9A 2QKNA 1FO4A 3LAEA 1FIQB 2Q85A 3LLBA 4MLAA 3ETRB 2GQTA 4OALA 2W3RA 1F0XA 3C0PA 2R2ZA 1T3QC 3I99A 5AE2A 5FXDA 3NVWB 2W3SA 2BVHA 1WYGA 5FXEA 1DZNA 1W1OA 2PLIA 5FXFA 3SR6B 3AN1A 3NVVB 2VFSA 1WVEA 1AHUA 3NVZB 3TX1A 2VFVA 1I19A 1JRPA 2MBRA 4JAYA 1VAOA 1W1MA 2I0KA 2PLSA 2VFUA 5FXPA 3W8WA 2VFRA 4ML8A 2VFTA 3NS1B 3BW7A 3NVYB 2P13A 4O95A 2NQWA 5ADZA 3AMZA 2E3TA 2VAOA 1QLUA 2W54A 3DQ0A 1W1KA 5G5HB 1E8HA 5AE1A 3EUB3 3S1CA 4BBYA 3DEDA 1RM6B 2AXRA 1W1QA 5HMRA 1MBBA 1WVFA 1SB3B 5AE3A 2BVFA 1N61C 1E0YA 2OAIA 2W55A 4HG0A 2BVGA 1ZXIC 1E8FA 1UXYA 1DIIA 1AHVA 2P3HA 2Q4WA 1N5XA 3AM9A 1MBTA 1N62C 2P4PA 1JROA 5HQXA 1HSKA 5HHZA 1N63C
chains in the Genus database with same CATH superfamily
4EC3A 4JB1A 1W1JA 3TSHA 1VDVA 3D2DA 5G5GB 5D79A 5L6GA 2GQUA 1FFUC 1QLTA 4PWCA 3W8XA 4BC7A 2Y4GA 5K8EA 3B9JB 3HRDC 1ZR6A 1FFVC 2RK5A 1N5WC 4PYTA 3S1DA 4DNSA 3PM9A 3FW9A 2Y3RA 2YVSA 3W8ZA 2R8DA 2Y08A 1W1RA 4XLOA 3KJMA 3JS8A 3FW8A 4BCAA 2O3GA 1W1SA 2QPMA 1AHZA 2IPIA 3TSJA 1N60C 1E8GA 2EXRA 4ZOHB 3S1EA 1DIQA 4PVKA 3POPA 3RJAA 1V97A 3S1FA 3PQBA 2Y3SA 1W1LA 3NRZB 4BC9A 2QKNA 3RJ8A 1FO4A 3LAEA 1FIQB 2Q85A 3LLBA 4MLAA 3ETRB 5AWVA 2GQTA 4OALA 2W3RA 5L6FA 4PVJA 2UUUA 1F0XA 3C0PA 2R2ZA 1T3QC 3I99A 5AE2A 5FXDA 3NVWB 2W3SA 2BVHA 1WYGA 5FXEA 1DZNA 1W1OA 2PLIA 5FXFA 3SR6B 2UUVA 3AN1A 3NVVB 2VFSA 1WVEA 1AHUA 3NVZB 3TX1A 2VFVA 1I19A 1JRPA 2MBRA 4PVHA 3VTEA 4JAYA 4PZFA 1VAOA 1W1MA 2I0KA 2PLSA 2VFUA 5FXPA 3W8WA 2VFRA 4ML8A 2VFTA 3NS1B 3BW7A 3NVYB 2P13A 4O95A 2NQWA 5ADZA 3AMZA 2E3TA 2VAOA 1QLUA 2W54A 4UD8A 3DQ0A 5I1VA 1W1KA 3D2HA 3D2JA 5G5HB 1E8HA 5AE1A 3EUB3 3S1CA 3HSUA 3GSYA 4BBYA 3DEDA 1RM6B 2AXRA 1W1QA 5HMRA 1MBBA 1WVFA 1SB3B 5AE3A 2BVFA 1N61C 1E0YA 2OAIA 2W55A 5I1WA 3FWAA 4HG0A 2BVGA 1ZXIC 1E8FA 4PWBA 1UXYA 1DIIA 1AHVA 2P3HA 3FW7A 2Q4WA 1N5XA 3AM9A 2WDWA 1MBTA 1N62C 2P4PA 4PVEA 1JROA 5HQXA 1HSKA 5HHZA 1N63C
chains in the Genus database with same CATH topology
4EC3A 4JB1A 1W1JA 3TSHA 1VDVA 3D2DA 5G5GB 5D79A 5L6GA 2GQUA 1FFUC 1QLTA 4PWCA 3W8XA 4BC7A 2Y4GA 5K8EA 3B9JB 3HRDC 1ZR6A 1FFVC 2RK5A 1N5WC 4PYTA 3S1DA 4DNSA 3PM9A 3FW9A 2Y3RA 2YVSA 3W8ZA 2R8DA 2Y08A 1W1RA 4XLOA 3KJMA 3JS8A 3FW8A 4BCAA 2O3GA 1W1SA 2QPMA 1AHZA 2IPIA 3TSJA 1N60C 1E8GA 2EXRA 4ZOHB 3S1EA 1DIQA 4PVKA 3POPA 3RJAA 1V97A 3S1FA 3PQBA 2Y3SA 1W1LA 3NRZB 4BC9A 2QKNA 3RJ8A 1FO4A 3LAEA 1FIQB 2Q85A 3LLBA 4MLAA 3ETRB 5AWVA 2GQTA 4OALA 2W3RA 5L6FA 4PVJA 2UUUA 1F0XA 3C0PA 2R2ZA 1T3QC 3I99A 5AE2A 5FXDA 3NVWB 2W3SA 2BVHA 1WYGA 5FXEA 1DZNA 1W1OA 2PLIA 5FXFA 3SR6B 2UUVA 3AN1A 3NVVB 2VFSA 1WVEA 1AHUA 3NVZB 3TX1A 2VFVA 1I19A 1JRPA 2MBRA 4PVHA 3VTEA 4JAYA 4PZFA 1VAOA 1W1MA 2I0KA 2PLSA 2VFUA 5FXPA 3W8WA 2VFRA 4ML8A 2VFTA 3NS1B 3BW7A 3NVYB 2P13A 4O95A 2NQWA 5ADZA 3AMZA 2E3TA 2VAOA 1QLUA 2W54A 4UD8A 3DQ0A 5I1VA 1W1KA 3D2HA 3D2JA 5G5HB 1E8HA 5AE1A 3EUB3 3S1CA 3HSUA 3GSYA 4BBYA 3DEDA 1RM6B 2AXRA 1W1QA 5HMRA 1MBBA 1WVFA 1SB3B 5AE3A 2BVFA 1N61C 1E0YA 2OAIA 2W55A 5I1WA 3FWAA 4HG0A 2BVGA 1ZXIC 1E8FA 4PWBA 1UXYA 1DIIA 1AHVA 2P3HA 3FW7A 2Q4WA 1N5XA 3AM9A 2WDWA 1MBTA 1N62C 2P4PA 4PVEA 1JROA 5HQXA 1HSKA 5HHZA 1N63C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4JB1 A;  1W1J A;  1VDV A;  5G5G B;  2GQU A;  1FFU C;  1QLT A;  3W8X A;  4BC7 A;  3B9J B;  3HRD C;  1ZR6 A;  1FFV C;  2RK5 A;  1N5W C;  4PYT A;  3S1D A;  3PM9 A;  2YVS A;  3W8Z A;  2R8D A;  1W1R A;  4XLO A;  3KJM A;  3JS8 A;  4BCA A;  2O3G A;  1W1S A;  2QPM A;  1AHZ A;  1N60 C;  1E8G A;  2EXR A;  4ZOH B;  3S1E A;  1DIQ A;  3S1F A;  1V97 A;  1W1L A;  3NRZ B;  4BC9 A;  2QKN A;  1FO4 A;  3LAE A;  1FIQ B;  2Q85 A;  3LLB A;  4MLA A;  3ETR B;  2GQT A;  4OAL A;  2W3R A;  1F0X A;  3C0P A;  2R2Z A;  1T3Q C;  3I99 A;  5AE2 A;  5FXD A;  3NVW B;  2W3S A;  2BVH A;  1WYG A;  5FXE A;  1DZN A;  1W1O A;  2PLI A;  5FXF A;  3SR6 B;  3AN1 A;  3NVV B;  2VFS A;  1WVE A;  1AHU A;  3NVZ B;  3TX1 A;  2VFV A;  1I19 A;  1JRP A;  2MBR A;  4JAY A;  1VAO A;  1W1M A;  2I0K A;  2PLS A;  2VFU A;  5FXP A;  3W8W A;  2VFR A;  4ML8 A;  2VFT A;  3NS1 B;  3BW7 A;  3NVY B;  2P13 A;  4O95 A;  2NQW A;  5ADZ A;  3AMZ A;  2E3T A;  2VAO A;  1QLU A;  2W54 A;  3DQ0 A;  1W1K A;  5G5H B;  1E8H A;  5AE1 A;  3EUB 3;  3S1C A;  4BBY A;  3DED A;  1RM6 B;  2AXR A;  1W1Q A;  5HMR A;  1MBB A;  1WVF A;  1SB3 B;  5AE3 A;  2BVF A;  1N61 C;  1E0Y A;  2OAI A;  2W55 A;  4HG0 A;  2BVG A;  1ZXI C;  1E8F A;  1UXY A;  1DII A;  1AHV A;  2P3H A;  2Q4W A;  1N5X A;  3AM9 A;  1MBT A;  1N62 C;  2P4P A;  1JRO A;  5HQX A;  1HSK A;  5HHZ A;  1N63 C; 
#chains in the Genus database with same CATH topology
 4EC3 A;  4JB1 A;  1W1J A;  3TSH A;  1VDV A;  3D2D A;  5G5G B;  5D79 A;  5L6G A;  2GQU A;  1FFU C;  1QLT A;  4PWC A;  3W8X A;  4BC7 A;  2Y4G A;  5K8E A;  3B9J B;  3HRD C;  1ZR6 A;  1FFV C;  2RK5 A;  1N5W C;  4PYT A;  3S1D A;  4DNS A;  3PM9 A;  3FW9 A;  2Y3R A;  2YVS A;  3W8Z A;  2R8D A;  2Y08 A;  1W1R A;  4XLO A;  3KJM A;  3JS8 A;  3FW8 A;  4BCA A;  2O3G A;  1W1S A;  2QPM A;  1AHZ A;  2IPI A;  3TSJ A;  1N60 C;  1E8G A;  2EXR A;  4ZOH B;  3S1E A;  1DIQ A;  4PVK A;  3POP A;  3RJA A;  1V97 A;  3S1F A;  3PQB A;  2Y3S A;  1W1L A;  3NRZ B;  4BC9 A;  2QKN A;  3RJ8 A;  1FO4 A;  3LAE A;  1FIQ B;  2Q85 A;  3LLB A;  4MLA A;  3ETR B;  5AWV A;  2GQT A;  4OAL A;  2W3R A;  5L6F A;  4PVJ A;  2UUU A;  1F0X A;  3C0P A;  2R2Z A;  1T3Q C;  3I99 A;  5AE2 A;  5FXD A;  3NVW B;  2W3S A;  2BVH A;  1WYG A;  5FXE A;  1DZN A;  1W1O A;  2PLI A;  5FXF A;  3SR6 B;  2UUV A;  3AN1 A;  3NVV B;  2VFS A;  1WVE A;  1AHU A;  3NVZ B;  3TX1 A;  2VFV A;  1I19 A;  1JRP A;  2MBR A;  4PVH A;  3VTE A;  4JAY A;  4PZF A;  1VAO A;  1W1M A;  2I0K A;  2PLS A;  2VFU A;  5FXP A;  3W8W A;  2VFR A;  4ML8 A;  2VFT A;  3NS1 B;  3BW7 A;  3NVY B;  2P13 A;  4O95 A;  2NQW A;  5ADZ A;  3AMZ A;  2E3T A;  2VAO A;  1QLU A;  2W54 A;  4UD8 A;  3DQ0 A;  5I1V A;  1W1K A;  3D2H A;  3D2J A;  5G5H B;  1E8H A;  5AE1 A;  3EUB 3;  3S1C A;  3HSU A;  3GSY A;  4BBY A;  3DED A;  1RM6 B;  2AXR A;  1W1Q A;  5HMR A;  1MBB A;  1WVF A;  1SB3 B;  5AE3 A;  2BVF A;  1N61 C;  1E0Y A;  2OAI A;  2W55 A;  5I1W A;  3FWA A;  4HG0 A;  2BVG A;  1ZXI C;  1E8F A;  4PWB A;  1UXY A;  1DII A;  1AHV A;  2P3H A;  3FW7 A;  2Q4W A;  1N5X A;  3AM9 A;  2WDW A;  1MBT A;  1N62 C;  2P4P A;  4PVE A;  1JRO A;  5HQX A;  1HSK A;  5HHZ A;  1N63 C; 
#chains in the Genus database with same CATH homology
 4EC3 A;  4JB1 A;  1W1J A;  3TSH A;  1VDV A;  3D2D A;  5G5G B;  5D79 A;  5L6G A;  2GQU A;  1FFU C;  1QLT A;  4PWC A;  3W8X A;  4BC7 A;  2Y4G A;  5K8E A;  3B9J B;  3HRD C;  1ZR6 A;  1FFV C;  2RK5 A;  1N5W C;  4PYT A;  3S1D A;  4DNS A;  3PM9 A;  3FW9 A;  2Y3R A;  2YVS A;  3W8Z A;  2R8D A;  2Y08 A;  1W1R A;  4XLO A;  3KJM A;  3JS8 A;  3FW8 A;  4BCA A;  2O3G A;  1W1S A;  2QPM A;  1AHZ A;  2IPI A;  3TSJ A;  1N60 C;  1E8G A;  2EXR A;  4ZOH B;  3S1E A;  1DIQ A;  4PVK A;  3POP A;  3RJA A;  1V97 A;  3S1F A;  3PQB A;  2Y3S A;  1W1L A;  3NRZ B;  4BC9 A;  2QKN A;  3RJ8 A;  1FO4 A;  3LAE A;  1FIQ B;  2Q85 A;  3LLB A;  4MLA A;  3ETR B;  5AWV A;  2GQT A;  4OAL A;  2W3R A;  5L6F A;  4PVJ A;  2UUU A;  1F0X A;  3C0P A;  2R2Z A;  1T3Q C;  3I99 A;  5AE2 A;  5FXD A;  3NVW B;  2W3S A;  2BVH A;  1WYG A;  5FXE A;  1DZN A;  1W1O A;  2PLI A;  5FXF A;  3SR6 B;  2UUV A;  3AN1 A;  3NVV B;  2VFS A;  1WVE A;  1AHU A;  3NVZ B;  3TX1 A;  2VFV A;  1I19 A;  1JRP A;  2MBR A;  4PVH A;  3VTE A;  4JAY A;  4PZF A;  1VAO A;  1W1M A;  2I0K A;  2PLS A;  2VFU A;  5FXP A;  3W8W A;  2VFR A;  4ML8 A;  2VFT A;  3NS1 B;  3BW7 A;  3NVY B;  2P13 A;  4O95 A;  2NQW A;  5ADZ A;  3AMZ A;  2E3T A;  2VAO A;  1QLU A;  2W54 A;  4UD8 A;  3DQ0 A;  5I1V A;  1W1K A;  3D2H A;  3D2J A;  5G5H B;  1E8H A;  5AE1 A;  3EUB 3;  3S1C A;  3HSU A;  3GSY A;  4BBY A;  3DED A;  1RM6 B;  2AXR A;  1W1Q A;  5HMR A;  1MBB A;  1WVF A;  1SB3 B;  5AE3 A;  2BVF A;  1N61 C;  1E0Y A;  2OAI A;  2W55 A;  5I1W A;  3FWA A;  4HG0 A;  2BVG A;  1ZXI C;  1E8F A;  4PWB A;  1UXY A;  1DII A;  1AHV A;  2P3H A;  3FW7 A;  2Q4W A;  1N5X A;  3AM9 A;  2WDW A;  1MBT A;  1N62 C;  2P4P A;  4PVE A;  1JRO A;  5HQX A;  1HSK A;  5HHZ A;  1N63 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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