4XLOA

Crystal structure of encm (crystallized with 4 mm nadph)
Total Genus 141
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
141
sequence length
458
structure length
458
Chain Sequence
QLDPATLAAFSAAFRGELIWPSDADYDEARRIWNGTIDRRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSIKVSRRLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGLVLGGGFGWLSRKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVRGGGGNFGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLPYRALQAYSFPGAVVPDRIYTKSGYLNELSDEATDTVLEHAADIASPFTQLELLYLGGAVARVPDDATAYPNRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALAGHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLFRLNQNIPPS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords FAD-dependent oxygenase EncM
publication title Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
pubmed doi rcsb
source organism Streptomyces maritimus
molecule tags Oxidoreductase
total genus 141
structure length 458
sequence length 458
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2015-01-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 4xloA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 4xloA02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 4xloA03
4BBYA 4DNSA 4PYTA 1W1QA 1W1MA 1VDVA 2GQTA 2I0KA 4UD8A 1QLTA 1DZNA 3NVVB 1T3QC 2OAIA 1N5XA 4BC7A 2P4PA 4JAYA 3TSJA 1RM6B 2WDWA 5I1VA 4PWBA 2O3GA 1W1JA 1W1LA 2RK5A 1DIIA 3TSHA 4MLAA 3VTEA 3FW9A 3D2JA 5K8EA 4PVEA 4BC9A 2R8DA 4JB1A 2EXRA 1MBTA 5HHZA 1E0YA 4HG0A 4O95A 3I99A 2VAOA 3W8ZA 2VFRA 1VAOA 2Y3RA 2W3SA 5ADZA 4XLOA 3EUB3 2Q4WA 3LLBA 3S1EA 1UXYA 3NS1B 5AE2A 1E8HA 1F0XA 4ZOHB 3KJMA 2BVGA 2NQWA 3JS8A 3FWAA 4OALA 3DEDA 2Q85A 2BVFA 2QKNA 2YVSA 1E8GA 3FW7A 1W1KA 1N61C 2W55A 5HQXA 3D2DA 3FW8A 5L6GA 5AWVA 1DIQA 1WYGA 3S1DA 3RJAA 5D79A 1W1OA 1ZXIC 3AN1A 4PZFA 2Y3SA 1V97A 3BW7A 4EC3A 4PWCA 1HSKA 3RJ8A 2BVHA 1MBBA 3NRZB 1FFVC 2VFVA 2GQUA 3DQ0A 4PVKA 3SR6B 5HMRA 2R2ZA 2IPIA 3AM9A 3PM9A 2VFSA 2MBRA 2AXRA 5AE1A 3POPA 3D2HA 3C0PA 2P13A 1N62C 3S1CA 2P3HA 2Y08A 5FXPA 3HRDC 1W1RA 1E8FA 2VFTA 3NVZB 1N60C 1FO4A 3GSYA 4BCAA 3NVYB 1QLUA 1JRPA 1N5WC 1WVEA 2E3TA 3ETRB 3S1FA 1W1SA 5AE3A 5FXFA 2VFUA 3B9JB 3W8WA 4PVHA 2PLSA 5FXEA 1SB3B 1AHZA 2W54A 4PVJA 2PLIA 3NVWB 2QPMA 5G5HB 3TX1A 2Y4GA 2W3RA 1AHVA 1FIQB 3HSUA 1I19A 5L6FA 1N63C 3AMZA 1AHUA 5I1WA 3W8XA 5G5GB 3PQBA 3LAEA 1JROA 1FFUC 1WVFA 5FXDA 4ML8A 1ZR6A
chains in the Genus database with same CATH superfamily
4BBYA 4DNSA 4PYTA 1W1QA 1W1MA 1VDVA 2GQTA 2I0KA 4UD8A 1QLTA 1DZNA 3NVVB 1T3QC 2OAIA 1N5XA 4BC7A 2P4PA 4JAYA 3TSJA 1RM6B 2WDWA 5I1VA 2UUVA 4PWBA 2O3GA 1W1JA 1W1LA 2RK5A 1DIIA 3TSHA 4MLAA 3VTEA 3FW9A 3D2JA 5K8EA 4PVEA 4BC9A 2UUUA 2R8DA 4JB1A 2EXRA 3EJEB 1MBTA 5HHZA 1E0YA 4HG0A 4O95A 3I99A 2VAOA 3W8ZA 2VFRA 1VAOA 2Y3RA 2W3SA 5ADZA 4XLOA 3EUB3 2Q4WA 3LLBA 3S1EA 1UXYA 3NS1B 5AE2A 1E8HA 1F0XA 4ZOHB 3KJMA 2BVGA 2NQWA 3JS8A 3FWAA 4OALA 3DEDA 2Q85A 2BVFA 2QKNA 2YVSA 1E8GA 3EJDB 3FW7A 1W1KA 1N61C 2W55A 5HQXA 3D2DA 3FW8A 5L6GA 5AWVA 1DIQA 1WYGA 3S1DA 3RJAA 5D79A 1W1OA 1ZXIC 3AN1A 4PZFA 2Y3SA 1V97A 3BW7A 4EC3A 4PWCA 1HSKA 3RJ8A 2BVHA 1MBBA 3NRZB 1FFVC 2VFVA 2GQUA 3DQ0A 4PVKA 3SR6B 5HMRA 2IPIA 2R2ZA 3AM9A 3PM9A 2VFSA 2MBRA 2AXRA 5AE1A 3POPA 3D2HA 3C0PA 2P13A 1N62C 3S1CA 2P3HA 2Y08A 5FXPA 3HRDC 1W1RA 1E8FA 2VFTA 3NVZB 1N60C 1FO4A 3EJBB 3GSYA 4BCAA 3NVYB 1QLUA 1JRPA 1N5WC 1WVEA 2E3TA 3ETRB 3S1FA 1W1SA 5AE3A 5FXFA 2VFUA 3B9JB 3W8WA 4PVHA 2PLSA 5FXEA 1SB3B 1AHZA 2W54A 4PVJA 3NVWB 2PLIA 2QPMA 5G5HB 3TX1A 2Y4GA 2W3RA 1AHVA 1FIQB 3HSUA 1I19A 5L6FA 1N63C 3AMZA 1AHUA 5I1WA 3W8XA 5G5GB 3PQBA 3LAEA 1JROA 1FFUC 1WVFA 5FXDA 4ML8A 1ZR6A
chains in the Genus database with same CATH topology
4BBYA 4DNSA 4PYTA 1W1QA 1W1MA 1VDVA 2GQTA 2I0KA 4UD8A 1QLTA 1DZNA 3NVVB 1T3QC 2OAIA 1N5XA 4BC7A 2P4PA 4JAYA 3TSJA 1RM6B 2WDWA 5I1VA 2UUVA 4PWBA 2O3GA 1W1JA 1W1LA 2RK5A 1DIIA 3TSHA 4MLAA 3VTEA 3FW9A 3D2JA 5K8EA 4PVEA 4BC9A 2UUUA 2R8DA 4JB1A 2EXRA 1MBTA 5HHZA 1E0YA 4HG0A 4O95A 3I99A 2VAOA 3W8ZA 2VFRA 1VAOA 2Y3RA 2W3SA 5ADZA 4XLOA 3EUB3 2Q4WA 3LLBA 3S1EA 1UXYA 3NS1B 5AE2A 1E8HA 1F0XA 4ZOHB 3KJMA 2BVGA 2NQWA 3JS8A 3FWAA 4OALA 3DEDA 2Q85A 2BVFA 2QKNA 2YVSA 1E8GA 3FW7A 1W1KA 1N61C 2W55A 5HQXA 3D2DA 3FW8A 5L6GA 5AWVA 1DIQA 1WYGA 3S1DA 3RJAA 5D79A 1W1OA 1ZXIC 3AN1A 4PZFA 2Y3SA 1V97A 3BW7A 4EC3A 4PWCA 1HSKA 3RJ8A 2BVHA 1MBBA 3NRZB 1FFVC 2VFVA 2GQUA 3DQ0A 4PVKA 3SR6B 5HMRA 2IPIA 2R2ZA 3AM9A 3PM9A 2VFSA 2MBRA 2AXRA 5AE1A 3POPA 3D2HA 3C0PA 2P13A 1N62C 3S1CA 2P3HA 2Y08A 5FXPA 3HRDC 1W1RA 1E8FA 2VFTA 3NVZB 1N60C 1FO4A 3GSYA 4BCAA 3NVYB 1QLUA 1JRPA 1N5WC 1WVEA 2E3TA 3ETRB 3S1FA 1W1SA 5AE3A 5FXFA 2VFUA 3B9JB 3W8WA 4PVHA 2PLSA 5FXEA 1SB3B 1AHZA 2W54A 4PVJA 2PLIA 3NVWB 2QPMA 5G5HB 3TX1A 2Y4GA 2W3RA 1AHVA 1FIQB 3HSUA 1I19A 5L6FA 1N63C 3AMZA 1AHUA 5I1WA 3W8XA 5G5GB 3PQBA 3LAEA 1JROA 1FFUC 1WVFA 5FXDA 4ML8A 1ZR6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BBY A;  4DNS A;  4PYT A;  1W1Q A;  1W1M A;  1VDV A;  2GQT A;  2I0K A;  4UD8 A;  1QLT A;  1DZN A;  3NVV B;  1T3Q C;  2OAI A;  1N5X A;  4BC7 A;  2P4P A;  4JAY A;  3TSJ A;  1RM6 B;  2WDW A;  5I1V A;  4PWB A;  2O3G A;  1W1J A;  1W1L A;  2RK5 A;  1DII A;  3TSH A;  4MLA A;  3VTE A;  3FW9 A;  3D2J A;  5K8E A;  4PVE A;  4BC9 A;  2R8D A;  4JB1 A;  2EXR A;  1MBT A;  5HHZ A;  1E0Y A;  4HG0 A;  4O95 A;  3I99 A;  2VAO A;  3W8Z A;  2VFR A;  1VAO A;  2Y3R A;  2W3S A;  5ADZ A;  4XLO A;  3EUB 3;  2Q4W A;  3LLB A;  3S1E A;  1UXY A;  3NS1 B;  5AE2 A;  1E8H A;  1F0X A;  4ZOH B;  3KJM A;  2BVG A;  2NQW A;  3JS8 A;  3FWA A;  4OAL A;  3DED A;  2Q85 A;  2BVF A;  2QKN A;  2YVS A;  1E8G A;  3FW7 A;  1W1K A;  1N61 C;  2W55 A;  5HQX A;  3D2D A;  3FW8 A;  5L6G A;  5AWV A;  1DIQ A;  1WYG A;  3S1D A;  3RJA A;  5D79 A;  1W1O A;  1ZXI C;  3AN1 A;  4PZF A;  2Y3S A;  1V97 A;  3BW7 A;  4EC3 A;  4PWC A;  1HSK A;  3RJ8 A;  2BVH A;  1MBB A;  3NRZ B;  1FFV C;  2VFV A;  2GQU A;  3DQ0 A;  4PVK A;  3SR6 B;  5HMR A;  2R2Z A;  2IPI A;  3AM9 A;  3PM9 A;  2VFS A;  2MBR A;  2AXR A;  5AE1 A;  3POP A;  3D2H A;  3C0P A;  2P13 A;  1N62 C;  3S1C A;  2P3H A;  2Y08 A;  5FXP A;  3HRD C;  1W1R A;  1E8F A;  2VFT A;  3NVZ B;  1N60 C;  1FO4 A;  3GSY A;  4BCA A;  3NVY B;  1QLU A;  1JRP A;  1N5W C;  1WVE A;  2E3T A;  3ETR B;  3S1F A;  1W1S A;  5AE3 A;  5FXF A;  2VFU A;  3B9J B;  3W8W A;  4PVH A;  2PLS A;  5FXE A;  1SB3 B;  1AHZ A;  2W54 A;  4PVJ A;  2PLI A;  3NVW B;  2QPM A;  5G5H B;  3TX1 A;  2Y4G A;  2W3R A;  1AHV A;  1FIQ B;  3HSU A;  1I19 A;  5L6F A;  1N63 C;  3AMZ A;  1AHU A;  5I1W A;  3W8X A;  5G5G B;  3PQB A;  3LAE A;  1JRO A;  1FFU C;  1WVF A;  5FXD A;  4ML8 A;  1ZR6 A; 
#chains in the Genus database with same CATH topology
 4BBY A;  4DNS A;  4PYT A;  1W1Q A;  1W1M A;  1VDV A;  2GQT A;  2I0K A;  4UD8 A;  1QLT A;  1DZN A;  3NVV B;  1T3Q C;  2OAI A;  1N5X A;  4BC7 A;  2P4P A;  4JAY A;  3TSJ A;  1RM6 B;  2WDW A;  5I1V A;  2UUV A;  4PWB A;  2O3G A;  1W1J A;  1W1L A;  2RK5 A;  1DII A;  3TSH A;  4MLA A;  3VTE A;  3FW9 A;  3D2J A;  5K8E A;  4PVE A;  4BC9 A;  2UUU A;  2R8D A;  4JB1 A;  2EXR A;  3EJE B;  1MBT A;  5HHZ A;  1E0Y A;  4HG0 A;  4O95 A;  3I99 A;  2VAO A;  3W8Z A;  2VFR A;  1VAO A;  2Y3R A;  2W3S A;  5ADZ A;  4XLO A;  3EUB 3;  2Q4W A;  3LLB A;  3S1E A;  1UXY A;  3NS1 B;  5AE2 A;  1E8H A;  1F0X A;  4ZOH B;  3KJM A;  2BVG A;  2NQW A;  3JS8 A;  3FWA A;  4OAL A;  3DED A;  2Q85 A;  2BVF A;  2QKN A;  2YVS A;  1E8G A;  3EJD B;  3FW7 A;  1W1K A;  1N61 C;  2W55 A;  5HQX A;  3D2D A;  3FW8 A;  5L6G A;  5AWV A;  1DIQ A;  1WYG A;  3S1D A;  3RJA A;  5D79 A;  1W1O A;  1ZXI C;  3AN1 A;  4PZF A;  2Y3S A;  1V97 A;  3BW7 A;  4EC3 A;  4PWC A;  1HSK A;  3RJ8 A;  2BVH A;  1MBB A;  3NRZ B;  1FFV C;  2VFV A;  2GQU A;  3DQ0 A;  4PVK A;  3SR6 B;  5HMR A;  2IPI A;  2R2Z A;  3AM9 A;  3PM9 A;  2VFS A;  2MBR A;  2AXR A;  5AE1 A;  3POP A;  3D2H A;  3C0P A;  2P13 A;  1N62 C;  3S1C A;  2P3H A;  2Y08 A;  5FXP A;  3HRD C;  1W1R A;  1E8F A;  2VFT A;  3NVZ B;  1N60 C;  1FO4 A;  3EJB B;  3GSY A;  4BCA A;  3NVY B;  1QLU A;  1JRP A;  1N5W C;  1WVE A;  2E3T A;  3ETR B;  3S1F A;  1W1S A;  5AE3 A;  5FXF A;  2VFU A;  3B9J B;  3W8W A;  4PVH A;  2PLS A;  5FXE A;  1SB3 B;  1AHZ A;  2W54 A;  4PVJ A;  3NVW B;  2PLI A;  2QPM A;  5G5H B;  3TX1 A;  2Y4G A;  2W3R A;  1AHV A;  1FIQ B;  3HSU A;  1I19 A;  5L6F A;  1N63 C;  3AMZ A;  1AHU A;  5I1W A;  3W8X A;  5G5G B;  3PQB A;  3LAE A;  1JRO A;  1FFU C;  1WVF A;  5FXD A;  4ML8 A;  1ZR6 A; 
#chains in the Genus database with same CATH homology
 4BBY A;  4DNS A;  4PYT A;  1W1Q A;  1W1M A;  1VDV A;  2GQT A;  2I0K A;  4UD8 A;  1QLT A;  1DZN A;  3NVV B;  1T3Q C;  2OAI A;  1N5X A;  4BC7 A;  2P4P A;  4JAY A;  3TSJ A;  1RM6 B;  2WDW A;  5I1V A;  2UUV A;  4PWB A;  2O3G A;  1W1J A;  1W1L A;  2RK5 A;  1DII A;  3TSH A;  4MLA A;  3VTE A;  3FW9 A;  3D2J A;  5K8E A;  4PVE A;  4BC9 A;  2UUU A;  2R8D A;  4JB1 A;  2EXR A;  1MBT A;  5HHZ A;  1E0Y A;  4HG0 A;  4O95 A;  3I99 A;  2VAO A;  3W8Z A;  2VFR A;  1VAO A;  2Y3R A;  2W3S A;  5ADZ A;  4XLO A;  3EUB 3;  2Q4W A;  3LLB A;  3S1E A;  1UXY A;  3NS1 B;  5AE2 A;  1E8H A;  1F0X A;  4ZOH B;  3KJM A;  2BVG A;  2NQW A;  3JS8 A;  3FWA A;  4OAL A;  3DED A;  2Q85 A;  2BVF A;  2QKN A;  2YVS A;  1E8G A;  3FW7 A;  1W1K A;  1N61 C;  2W55 A;  5HQX A;  3D2D A;  3FW8 A;  5L6G A;  5AWV A;  1DIQ A;  1WYG A;  3S1D A;  3RJA A;  5D79 A;  1W1O A;  1ZXI C;  3AN1 A;  4PZF A;  2Y3S A;  1V97 A;  3BW7 A;  4EC3 A;  4PWC A;  1HSK A;  3RJ8 A;  2BVH A;  1MBB A;  3NRZ B;  1FFV C;  2VFV A;  2GQU A;  3DQ0 A;  4PVK A;  3SR6 B;  5HMR A;  2IPI A;  2R2Z A;  3AM9 A;  3PM9 A;  2VFS A;  2MBR A;  2AXR A;  5AE1 A;  3POP A;  3D2H A;  3C0P A;  2P13 A;  1N62 C;  3S1C A;  2P3H A;  2Y08 A;  5FXP A;  3HRD C;  1W1R A;  1E8F A;  2VFT A;  3NVZ B;  1N60 C;  1FO4 A;  3GSY A;  4BCA A;  3NVY B;  1QLU A;  1JRP A;  1N5W C;  1WVE A;  2E3T A;  3ETR B;  3S1F A;  1W1S A;  5AE3 A;  5FXF A;  2VFU A;  3B9J B;  3W8W A;  4PVH A;  2PLS A;  5FXE A;  1SB3 B;  1AHZ A;  2W54 A;  4PVJ A;  2PLI A;  3NVW B;  2QPM A;  5G5H B;  3TX1 A;  2Y4G A;  2W3R A;  1AHV A;  1FIQ B;  3HSU A;  1I19 A;  5L6F A;  1N63 C;  3AMZ A;  1AHU A;  5I1W A;  3W8X A;  5G5G B;  3PQB A;  3LAE A;  1JRO A;  1FFU C;  1WVF A;  5FXD A;  4ML8 A;  1ZR6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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