4XLOA

Crystal structure of encm (crystallized with 4 mm nadph)
Total Genus 141
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
141
sequence length
458
structure length
458
Chain Sequence
QLDPATLAAFSAAFRGELIWPSDADYDEARRIWNGTIDRRPALIARCTSTPDVVAAVSFARKSGLLVAVRGGGHSMAGHSVCDGGIVIDLSLMNSIKVSRRLRRARAQGGCLLGAFDTATQAHMLATPAGVVSHTGLGGLVLGGGFGWLSRKYGLSIDNLTSVEIVTADGGVLTASDTENPDLFWAVRGGGGNFGVVTAFEFDLHRVGPVRFASTYYSLDEGPQVIRAWRDHMATAPDELTWALYLRLAPPLPELPADMHGKPVICAMSCWIGDPHEGERQLESILHAGKPHGLTKATLPYRALQAYSFPGAVVPDRIYTKSGYLNELSDEATDTVLEHAADIASPFTQLELLYLGGAVARVPDDATAYPNRQSPFVTNLAAAWMDPTEDARHTAWAREGYRALAGHLSGGYVNFMNPGEADRTREAYGAAKFERLQGVKAKYDPTNLFRLNQNIPPS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords FAD-dependent oxygenase EncM
publication title Flavin-mediated dual oxidation controls an enzymatic Favorskii-type rearrangement.
pubmed doi rcsb
source organism Streptomyces maritimus
molecule tags Oxidoreductase
total genus 141
structure length 458
sequence length 458
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2015-01-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF08031 BBE Berberine and berberine like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 4xloA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 4xloA02
3.40.462.20 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 Vanillyl-alcohol Oxidase; Chain A, domain 3 4xloA03
3POPA 3TSHA 2GQTA 3HSUA 1W1KA 1QLTA 1UXYA 4EC3A 3RJAA 5AE2A 5ADZA 2QPMA 1ZXIC 3FW8A 1E0YA 1T3QC 3NVYB 4PWBA 3RJ8A 5I1VA 4PVEA 3S1EA 1N60C 3PM9A 4PVJA 4O95A 1JROA 1WYGA 1JRPA 3AM9A 1FFUC 2MBRA 5L6GA 1FFVC 2Y4GA 3W8XA 4PVHA 3S1CA 3B9JB 3DEDA 5HHZA 2VFRA 4BCAA 3FW9A 3VTEA 5I1WA 1W1SA 4PYTA 2W54A 5HMRA 5FXPA 1VAOA 1E8FA 1W1OA 2E3TA 2PLSA 2YVSA 3W8ZA 5FXEA 1I19A 3S1FA 5D79A 3JS8A 4XLOA 3TX1A 1DZNA 1SB3B 1N5XA 3D2JA 4PWCA 3D2HA 2Y08A 3LLBA 1VDVA 2W3SA 3AMZA 2W3RA 1F0XA 3S1DA 1WVEA 1N5WC 1HSKA 1W1JA 2VFVA 2BVFA 4OALA 1N61C 1DIQA 1E8HA 1W1RA 2Q4WA 1N63C 1QLUA 2VFSA 2WDWA 4PZFA 3HRDC 2W55A 4ML8A 5G5GB 5K8EA 1WVFA 1AHUA 1E8GA 2Y3SA 3KJMA 4BC9A 1RM6B 2PLIA 3C0PA 3NS1B 2P13A 2EXRA 5L6FA 2QKNA 3ETRB 2RK5A 4PVKA 3NRZB 3BW7A 3I99A 3EUB3 2Y3RA 5AWVA 3FW7A 3DQ0A 2R8DA 4UD8A 1FIQB 2OAIA 2BVHA 2I0KA 3NVZB 3SR6B 3PQBA 2O3GA 1MBBA 1W1MA 2IPIA 2R2ZA 2Q85A 1W1QA 2VFTA 4DNSA 3LAEA 5AE1A 1W1LA 1AHVA 5AE3A 2VAOA 1MBTA 2P4PA 3D2DA 4HG0A 1DIIA 2GQUA 5G5HB 5FXDA 5FXFA 3NVWB 1FO4A 1AHZA 4BBYA 3W8WA 1V97A 4MLAA 2AXRA 1N62C 3FWAA 1ZR6A 2VFUA 3AN1A 4JB1A 2BVGA 3NVVB 2P3HA 4JAYA 3GSYA 5HQXA 2NQWA 3TSJA 4BC7A 4ZOHB
chains in the Genus database with same CATH superfamily
3POPA 3TSHA 2GQTA 3HSUA 1W1KA 1QLTA 1UXYA 4EC3A 3RJAA 5AE2A 5ADZA 2QPMA 1ZXIC 3FW8A 1E0YA 1T3QC 3NVYB 4PWBA 3RJ8A 5I1VA 4PVEA 3S1EA 1N60C 3PM9A 4PVJA 4O95A 1JROA 1WYGA 1JRPA 3EJBB 3AM9A 1FFUC 2UUUA 2MBRA 5L6GA 1FFVC 2Y4GA 3W8XA 4PVHA 3S1CA 3B9JB 3DEDA 5HHZA 2VFRA 4BCAA 3FW9A 3VTEA 5I1WA 1W1SA 4PYTA 2W54A 5HMRA 5FXPA 1VAOA 1E8FA 1W1OA 2E3TA 2PLSA 2YVSA 3W8ZA 5FXEA 1I19A 3S1FA 5D79A 3JS8A 4XLOA 3TX1A 1DZNA 1SB3B 1N5XA 3D2JA 4PWCA 3D2HA 2Y08A 3LLBA 1VDVA 2W3SA 3AMZA 2W3RA 1F0XA 3S1DA 1WVEA 1N5WC 1HSKA 1W1JA 2VFVA 2BVFA 4OALA 1N61C 1DIQA 1E8HA 1W1RA 2Q4WA 1N63C 1QLUA 2VFSA 2WDWA 3EJDB 4PZFA 3HRDC 2W55A 4ML8A 5G5GB 5K8EA 1WVFA 1AHUA 1E8GA 2Y3SA 3KJMA 4BC9A 1RM6B 2PLIA 3C0PA 3NS1B 2P13A 2EXRA 5L6FA 2QKNA 3ETRB 2RK5A 4PVKA 3NRZB 3BW7A 3I99A 3EUB3 2Y3RA 5AWVA 3FW7A 3DQ0A 2R8DA 4UD8A 1FIQB 2OAIA 2BVHA 2I0KA 3NVZB 3SR6B 3PQBA 2O3GA 1MBBA 1W1MA 2IPIA 2R2ZA 2Q85A 1W1QA 2VFTA 4DNSA 3LAEA 5AE1A 1W1LA 1AHVA 5AE3A 2VAOA 1MBTA 2P4PA 2UUVA 3D2DA 4HG0A 1DIIA 2GQUA 5G5HB 5FXDA 5FXFA 3NVWB 1FO4A 1AHZA 4BBYA 3W8WA 1V97A 4MLAA 2AXRA 1N62C 3FWAA 1ZR6A 2VFUA 3AN1A 4JB1A 2BVGA 3EJEB 3NVVB 2P3HA 4JAYA 3GSYA 5HQXA 2NQWA 3TSJA 4BC7A 4ZOHB
chains in the Genus database with same CATH topology
3POPA 3TSHA 2GQTA 3HSUA 1W1KA 1QLTA 1UXYA 4EC3A 3RJAA 5AE2A 5ADZA 2QPMA 1ZXIC 3FW8A 1E0YA 1T3QC 3NVYB 4PWBA 3RJ8A 5I1VA 4PVEA 3S1EA 1N60C 3PM9A 4PVJA 4O95A 1JROA 1WYGA 1JRPA 2UUUA 3AM9A 1FFUC 2MBRA 5L6GA 1FFVC 2Y4GA 3W8XA 4PVHA 3S1CA 3B9JB 3DEDA 5HHZA 2VFRA 4BCAA 3FW9A 3VTEA 5I1WA 1W1SA 4PYTA 2W54A 5HMRA 5FXPA 1VAOA 1E8FA 1W1OA 2E3TA 2PLSA 2YVSA 3W8ZA 5FXEA 1I19A 3S1FA 5D79A 3JS8A 4XLOA 3TX1A 1DZNA 1SB3B 1N5XA 3D2JA 4PWCA 3D2HA 2Y08A 3LLBA 1VDVA 2W3SA 3AMZA 2W3RA 1F0XA 3S1DA 1WVEA 1N5WC 1HSKA 1W1JA 2VFVA 2BVFA 4OALA 1N61C 1DIQA 1E8HA 1W1RA 2Q4WA 1N63C 1QLUA 2VFSA 2WDWA 4PZFA 3HRDC 2W55A 4ML8A 5G5GB 5K8EA 1WVFA 1AHUA 1E8GA 2Y3SA 3KJMA 4BC9A 1RM6B 2PLIA 3C0PA 3NS1B 2P13A 2EXRA 5L6FA 2QKNA 3ETRB 2RK5A 4PVKA 3NRZB 3BW7A 3I99A 3EUB3 2Y3RA 5AWVA 3FW7A 3DQ0A 2R8DA 4UD8A 1FIQB 2OAIA 2BVHA 2I0KA 3NVZB 3SR6B 3PQBA 2O3GA 1MBBA 1W1MA 2IPIA 2R2ZA 2Q85A 1W1QA 2VFTA 4DNSA 3LAEA 5AE1A 1W1LA 1AHVA 5AE3A 2VAOA 1MBTA 2P4PA 2UUVA 3D2DA 4HG0A 1DIIA 2GQUA 5G5HB 5FXDA 5FXFA 3NVWB 1FO4A 1AHZA 4BBYA 3W8WA 1V97A 4MLAA 2AXRA 1N62C 3FWAA 1ZR6A 2VFUA 3AN1A 4JB1A 2BVGA 3NVVB 2P3HA 4JAYA 3GSYA 5HQXA 2NQWA 3TSJA 4BC7A 4ZOHB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3POP A;  3TSH A;  2GQT A;  3HSU A;  1W1K A;  1QLT A;  1UXY A;  4EC3 A;  3RJA A;  5AE2 A;  5ADZ A;  2QPM A;  1ZXI C;  3FW8 A;  1E0Y A;  1T3Q C;  3NVY B;  4PWB A;  3RJ8 A;  5I1V A;  4PVE A;  3S1E A;  1N60 C;  3PM9 A;  4PVJ A;  4O95 A;  1JRO A;  1WYG A;  1JRP A;  3AM9 A;  1FFU C;  2MBR A;  5L6G A;  1FFV C;  2Y4G A;  3W8X A;  4PVH A;  3S1C A;  3B9J B;  3DED A;  5HHZ A;  2VFR A;  4BCA A;  3FW9 A;  3VTE A;  5I1W A;  1W1S A;  4PYT A;  2W54 A;  5HMR A;  5FXP A;  1VAO A;  1E8F A;  1W1O A;  2E3T A;  2PLS A;  2YVS A;  3W8Z A;  5FXE A;  1I19 A;  3S1F A;  5D79 A;  3JS8 A;  4XLO A;  3TX1 A;  1DZN A;  1SB3 B;  1N5X A;  3D2J A;  4PWC A;  3D2H A;  2Y08 A;  3LLB A;  1VDV A;  2W3S A;  3AMZ A;  2W3R A;  1F0X A;  3S1D A;  1WVE A;  1N5W C;  1HSK A;  1W1J A;  2VFV A;  2BVF A;  4OAL A;  1N61 C;  1DIQ A;  1E8H A;  1W1R A;  2Q4W A;  1N63 C;  1QLU A;  2VFS A;  2WDW A;  4PZF A;  3HRD C;  2W55 A;  4ML8 A;  5G5G B;  5K8E A;  1WVF A;  1AHU A;  1E8G A;  2Y3S A;  3KJM A;  4BC9 A;  1RM6 B;  2PLI A;  3C0P A;  3NS1 B;  2P13 A;  2EXR A;  5L6F A;  2QKN A;  3ETR B;  2RK5 A;  4PVK A;  3NRZ B;  3BW7 A;  3I99 A;  3EUB 3;  2Y3R A;  5AWV A;  3FW7 A;  3DQ0 A;  2R8D A;  4UD8 A;  1FIQ B;  2OAI A;  2BVH A;  2I0K A;  3NVZ B;  3SR6 B;  3PQB A;  2O3G A;  1MBB A;  1W1M A;  2IPI A;  2R2Z A;  2Q85 A;  1W1Q A;  2VFT A;  4DNS A;  3LAE A;  5AE1 A;  1W1L A;  1AHV A;  5AE3 A;  2VAO A;  1MBT A;  2P4P A;  3D2D A;  4HG0 A;  1DII A;  2GQU A;  5G5H B;  5FXD A;  5FXF A;  3NVW B;  1FO4 A;  1AHZ A;  4BBY A;  3W8W A;  1V97 A;  4MLA A;  2AXR A;  1N62 C;  3FWA A;  1ZR6 A;  2VFU A;  3AN1 A;  4JB1 A;  2BVG A;  3NVV B;  2P3H A;  4JAY A;  3GSY A;  5HQX A;  2NQW A;  3TSJ A;  4BC7 A;  4ZOH B; 
#chains in the Genus database with same CATH topology
 3POP A;  3TSH A;  2GQT A;  3HSU A;  1W1K A;  1QLT A;  1UXY A;  4EC3 A;  3RJA A;  5AE2 A;  5ADZ A;  2QPM A;  1ZXI C;  3FW8 A;  1E0Y A;  1T3Q C;  3NVY B;  4PWB A;  3RJ8 A;  5I1V A;  4PVE A;  3S1E A;  1N60 C;  3PM9 A;  4PVJ A;  4O95 A;  1JRO A;  1WYG A;  1JRP A;  3EJB B;  3AM9 A;  1FFU C;  2UUU A;  2MBR A;  5L6G A;  1FFV C;  2Y4G A;  3W8X A;  4PVH A;  3S1C A;  3B9J B;  3DED A;  5HHZ A;  2VFR A;  4BCA A;  3FW9 A;  3VTE A;  5I1W A;  1W1S A;  4PYT A;  2W54 A;  5HMR A;  5FXP A;  1VAO A;  1E8F A;  1W1O A;  2E3T A;  2PLS A;  2YVS A;  3W8Z A;  5FXE A;  1I19 A;  3S1F A;  5D79 A;  3JS8 A;  4XLO A;  3TX1 A;  1DZN A;  1SB3 B;  1N5X A;  3D2J A;  4PWC A;  3D2H A;  2Y08 A;  3LLB A;  1VDV A;  2W3S A;  3AMZ A;  2W3R A;  1F0X A;  3S1D A;  1WVE A;  1N5W C;  1HSK A;  1W1J A;  2VFV A;  2BVF A;  4OAL A;  1N61 C;  1DIQ A;  1E8H A;  1W1R A;  2Q4W A;  1N63 C;  1QLU A;  2VFS A;  2WDW A;  3EJD B;  4PZF A;  3HRD C;  2W55 A;  4ML8 A;  5G5G B;  5K8E A;  1WVF A;  1AHU A;  1E8G A;  2Y3S A;  3KJM A;  4BC9 A;  1RM6 B;  2PLI A;  3C0P A;  3NS1 B;  2P13 A;  2EXR A;  5L6F A;  2QKN A;  3ETR B;  2RK5 A;  4PVK A;  3NRZ B;  3BW7 A;  3I99 A;  3EUB 3;  2Y3R A;  5AWV A;  3FW7 A;  3DQ0 A;  2R8D A;  4UD8 A;  1FIQ B;  2OAI A;  2BVH A;  2I0K A;  3NVZ B;  3SR6 B;  3PQB A;  2O3G A;  1MBB A;  1W1M A;  2IPI A;  2R2Z A;  2Q85 A;  1W1Q A;  2VFT A;  4DNS A;  3LAE A;  5AE1 A;  1W1L A;  1AHV A;  5AE3 A;  2VAO A;  1MBT A;  2P4P A;  2UUV A;  3D2D A;  4HG0 A;  1DII A;  2GQU A;  5G5H B;  5FXD A;  5FXF A;  3NVW B;  1FO4 A;  1AHZ A;  4BBY A;  3W8W A;  1V97 A;  4MLA A;  2AXR A;  1N62 C;  3FWA A;  1ZR6 A;  2VFU A;  3AN1 A;  4JB1 A;  2BVG A;  3EJE B;  3NVV B;  2P3H A;  4JAY A;  3GSY A;  5HQX A;  2NQW A;  3TSJ A;  4BC7 A;  4ZOH B; 
#chains in the Genus database with same CATH homology
 3POP A;  3TSH A;  2GQT A;  3HSU A;  1W1K A;  1QLT A;  1UXY A;  4EC3 A;  3RJA A;  5AE2 A;  5ADZ A;  2QPM A;  1ZXI C;  3FW8 A;  1E0Y A;  1T3Q C;  3NVY B;  4PWB A;  3RJ8 A;  5I1V A;  4PVE A;  3S1E A;  1N60 C;  3PM9 A;  4PVJ A;  4O95 A;  1JRO A;  1WYG A;  1JRP A;  2UUU A;  3AM9 A;  1FFU C;  2MBR A;  5L6G A;  1FFV C;  2Y4G A;  3W8X A;  4PVH A;  3S1C A;  3B9J B;  3DED A;  5HHZ A;  2VFR A;  4BCA A;  3FW9 A;  3VTE A;  5I1W A;  1W1S A;  4PYT A;  2W54 A;  5HMR A;  5FXP A;  1VAO A;  1E8F A;  1W1O A;  2E3T A;  2PLS A;  2YVS A;  3W8Z A;  5FXE A;  1I19 A;  3S1F A;  5D79 A;  3JS8 A;  4XLO A;  3TX1 A;  1DZN A;  1SB3 B;  1N5X A;  3D2J A;  4PWC A;  3D2H A;  2Y08 A;  3LLB A;  1VDV A;  2W3S A;  3AMZ A;  2W3R A;  1F0X A;  3S1D A;  1WVE A;  1N5W C;  1HSK A;  1W1J A;  2VFV A;  2BVF A;  4OAL A;  1N61 C;  1DIQ A;  1E8H A;  1W1R A;  2Q4W A;  1N63 C;  1QLU A;  2VFS A;  2WDW A;  4PZF A;  3HRD C;  2W55 A;  4ML8 A;  5G5G B;  5K8E A;  1WVF A;  1AHU A;  1E8G A;  2Y3S A;  3KJM A;  4BC9 A;  1RM6 B;  2PLI A;  3C0P A;  3NS1 B;  2P13 A;  2EXR A;  5L6F A;  2QKN A;  3ETR B;  2RK5 A;  4PVK A;  3NRZ B;  3BW7 A;  3I99 A;  3EUB 3;  2Y3R A;  5AWV A;  3FW7 A;  3DQ0 A;  2R8D A;  4UD8 A;  1FIQ B;  2OAI A;  2BVH A;  2I0K A;  3NVZ B;  3SR6 B;  3PQB A;  2O3G A;  1MBB A;  1W1M A;  2IPI A;  2R2Z A;  2Q85 A;  1W1Q A;  2VFT A;  4DNS A;  3LAE A;  5AE1 A;  1W1L A;  1AHV A;  5AE3 A;  2VAO A;  1MBT A;  2P4P A;  2UUV A;  3D2D A;  4HG0 A;  1DII A;  2GQU A;  5G5H B;  5FXD A;  5FXF A;  3NVW B;  1FO4 A;  1AHZ A;  4BBY A;  3W8W A;  1V97 A;  4MLA A;  2AXR A;  1N62 C;  3FWA A;  1ZR6 A;  2VFU A;  3AN1 A;  4JB1 A;  2BVG A;  3NVV B;  2P3H A;  4JAY A;  3GSY A;  5HQX A;  2NQW A;  3TSJ A;  4BC7 A;  4ZOH B; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...