3BW7A

Maize cytokinin oxidase/dehydrogenase complexed with the allenic cytokinin analog ha-1
Total Genus 167
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
167
sequence length
503
structure length
497
Chain Sequence
RPWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTADLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRLVYTDFAAFSADQERLTAPRSFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Mechanism-based inhibitors of cytokinin oxidase/dehydrogenase attack FAD cofactor
pubmed doi rcsb
source organism Zea mays
molecule tags Oxidoreductase
molecule keywords Cytokinin dehydrogenase 1
total genus 167
structure length 497
sequence length 503
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2008-01-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3bw7A01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3bw7A02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 3bw7A03
1WYGA 3TX1A 2NQWA 2MBRA 3D2JA 4XLOA 5AE2A 4JAYA 3D2HA 4MLAA 1SB3B 4PVHA 4JB1A 2R2ZA 1E0YA 3SR6B 4PWBA 4HG0A 3S1DA 1N60C 1WVEA 4BC9A 1ZXIC 1FFVC 1W1SA 2RK5A 3NVWB 3S1FA 5HQXA 1VDVA 3PM9A 5G5HB 3W8WA 1F0XA 2VFSA 2PLSA 5FXPA 1W1LA 3DQ0A 5ADZA 1RM6B 5AE3A 3C0PA 4DNSA 1QLUA 4BC7A 1FO4A 2P4PA 4PWCA 2P13A 4BCAA 1I19A 1AHUA 5AE1A 4ML8A 4PZFA 2I0KA 4UD8A 1ZR6A 3NVZB 2EXRA 3LLBA 1MBTA 5FXDA 1DIQA 1AHZA 4ZOHB 1W1OA 2GQUA 3NS1B 4PVEA 3FW7A 4PVJA 1UXYA 2R8DA 3TSJA 5HHZA 1MBBA 1AHVA 1V97A 2Q4WA 3NVYB 2BVGA 1W1QA 1W1KA 2VFUA 1QLTA 1FFUC 2VFTA 4PVKA 2W3SA 1N5WC 1WVFA 3HRDC 3NVVB 1DZNA 1E8HA 3W8ZA 3DEDA 5FXFA 4EC3A 5FXEA 5HMRA 2YVSA 5D79A 1N63C 3AMZA 2W54A 4OALA 1E8GA 3S1CA 2O3GA 2E3TA 3GSYA 3VTEA 2W55A 2AXRA 3AN1A 2OAIA 2QKNA 5G5GB 4PYTA 3FW9A 2PLIA 3AM9A 2Q85A 1JROA 1FIQB 4BBYA 2GQTA 3B9JB 1DIIA 1JRPA 1N62C 3ETRB 1T3QC 1W1RA 2BVHA 1HSKA 2VFVA 3EUB3 1W1JA 3S1EA 3BW7A 2P3HA 3FW8A 3FWAA 4O95A 2W3RA 2BVFA 3KJMA 3JS8A 1N5XA 3I99A 2QPMA 3W8XA 1E8FA 3TSHA 1W1MA 3D2DA 2VAOA 3NRZB 2VFRA 1N61C 3LAEA 1VAOA
chains in the Genus database with same CATH superfamily
1WYGA 3TX1A 2NQWA 2MBRA 3POPA 3D2JA 5AWVA 4XLOA 5AE2A 4JAYA 3D2HA 4MLAA 1SB3B 4PVHA 2Y08A 4JB1A 2R2ZA 3EJBB 1E0YA 3SR6B 4PWBA 5I1WA 4HG0A 3S1DA 1N60C 1WVEA 4BC9A 1ZXIC 1FFVC 1W1SA 2RK5A 3NVWB 3S1FA 5HQXA 1VDVA 3PM9A 5G5HB 3W8WA 1F0XA 2VFSA 2PLSA 5FXPA 1W1LA 3DQ0A 5ADZA 1RM6B 3PQBA 5AE3A 5L6FA 2UUUA 3C0PA 4DNSA 1QLUA 4BC7A 1FO4A 2P4PA 4PWCA 2P13A 4BCAA 1I19A 1AHUA 5AE1A 4ML8A 4PZFA 3RJ8A 2I0KA 3EJEB 4UD8A 1ZR6A 3NVZB 2EXRA 3LLBA 5I1VA 1MBTA 5FXDA 1DIQA 2IPIA 1AHZA 2Y3RA 4ZOHB 1W1OA 2GQUA 3NS1B 4PVEA 5L6GA 3FW7A 4PVJA 1UXYA 2R8DA 3TSJA 5HHZA 3HSUA 1MBBA 1AHVA 1V97A 2Q4WA 3NVYB 2BVGA 1W1QA 1W1KA 2VFUA 1QLTA 1FFUC 2VFTA 3RJAA 4PVKA 2Y3SA 2W3SA 1N5WC 1WVFA 3HRDC 3NVVB 1DZNA 1E8HA 3W8ZA 3DEDA 5FXFA 4EC3A 5FXEA 5HMRA 2YVSA 5D79A 1N63C 3AMZA 2W54A 4OALA 1E8GA 3S1CA 2O3GA 2E3TA 3GSYA 3VTEA 2W55A 2AXRA 3AN1A 2OAIA 2QKNA 5G5GB 4PYTA 3FW9A 2PLIA 5K8EA 3AM9A 2Q85A 1JROA 1FIQB 4BBYA 2GQTA 3B9JB 1DIIA 1JRPA 1N62C 3ETRB 1T3QC 1W1RA 2BVHA 1HSKA 2VFVA 3EUB3 2UUVA 1W1JA 3S1EA 3BW7A 2P3HA 3FW8A 2WDWA 3FWAA 4O95A 2W3RA 2BVFA 3KJMA 3JS8A 2Y4GA 1N5XA 3I99A 3EJDB 2QPMA 3W8XA 1E8FA 3TSHA 1W1MA 3D2DA 2VAOA 3NRZB 2VFRA 1N61C 3LAEA 1VAOA
chains in the Genus database with same CATH topology
1WYGA 3TX1A 2NQWA 2MBRA 3POPA 3D2JA 5AWVA 4XLOA 5AE2A 4JAYA 3D2HA 4MLAA 1SB3B 4PVHA 2Y08A 4JB1A 2R2ZA 1E0YA 3SR6B 4PWBA 5I1WA 4HG0A 3S1DA 1N60C 1WVEA 4BC9A 1ZXIC 1FFVC 1W1SA 2RK5A 3NVWB 3S1FA 5HQXA 1VDVA 3PM9A 5G5HB 3W8WA 1F0XA 2VFSA 2PLSA 5FXPA 1W1LA 3DQ0A 5ADZA 1RM6B 3PQBA 5AE3A 5L6FA 2UUUA 3C0PA 4DNSA 1QLUA 4BC7A 1FO4A 2P4PA 4PWCA 2P13A 4BCAA 1I19A 1AHUA 5AE1A 4ML8A 4PZFA 3RJ8A 2I0KA 4UD8A 1ZR6A 3NVZB 2EXRA 3LLBA 5I1VA 1MBTA 5FXDA 1DIQA 2IPIA 1AHZA 2Y3RA 4ZOHB 1W1OA 2GQUA 3NS1B 4PVEA 5L6GA 3FW7A 4PVJA 1UXYA 2R8DA 3TSJA 5HHZA 3HSUA 1MBBA 1AHVA 1V97A 2Q4WA 3NVYB 2BVGA 1W1QA 1W1KA 2VFUA 1QLTA 1FFUC 2VFTA 3RJAA 4PVKA 2Y3SA 2W3SA 1N5WC 1WVFA 3HRDC 3NVVB 1DZNA 1E8HA 3W8ZA 3DEDA 5FXFA 4EC3A 5FXEA 5HMRA 2YVSA 5D79A 1N63C 3AMZA 2W54A 4OALA 1E8GA 3S1CA 2O3GA 2E3TA 3GSYA 3VTEA 2W55A 2AXRA 3AN1A 2OAIA 2QKNA 5G5GB 4PYTA 3FW9A 2PLIA 5K8EA 3AM9A 2Q85A 1JROA 1FIQB 4BBYA 2GQTA 3B9JB 1DIIA 1JRPA 1N62C 3ETRB 1T3QC 1W1RA 2BVHA 1HSKA 2VFVA 3EUB3 2UUVA 1W1JA 3S1EA 3BW7A 2P3HA 3FW8A 2WDWA 3FWAA 4O95A 2W3RA 2BVFA 3KJMA 3JS8A 2Y4GA 1N5XA 3I99A 2QPMA 3W8XA 1E8FA 3TSHA 1W1MA 3D2DA 2VAOA 3NRZB 2VFRA 1N61C 3LAEA 1VAOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WYG A;  3TX1 A;  2NQW A;  2MBR A;  3D2J A;  4XLO A;  5AE2 A;  4JAY A;  3D2H A;  4MLA A;  1SB3 B;  4PVH A;  4JB1 A;  2R2Z A;  1E0Y A;  3SR6 B;  4PWB A;  4HG0 A;  3S1D A;  1N60 C;  1WVE A;  4BC9 A;  1ZXI C;  1FFV C;  1W1S A;  2RK5 A;  3NVW B;  3S1F A;  5HQX A;  1VDV A;  3PM9 A;  5G5H B;  3W8W A;  1F0X A;  2VFS A;  2PLS A;  5FXP A;  1W1L A;  3DQ0 A;  5ADZ A;  1RM6 B;  5AE3 A;  3C0P A;  4DNS A;  1QLU A;  4BC7 A;  1FO4 A;  2P4P A;  4PWC A;  2P13 A;  4BCA A;  1I19 A;  1AHU A;  5AE1 A;  4ML8 A;  4PZF A;  2I0K A;  4UD8 A;  1ZR6 A;  3NVZ B;  2EXR A;  3LLB A;  1MBT A;  5FXD A;  1DIQ A;  1AHZ A;  4ZOH B;  1W1O A;  2GQU A;  3NS1 B;  4PVE A;  3FW7 A;  4PVJ A;  1UXY A;  2R8D A;  3TSJ A;  5HHZ A;  1MBB A;  1AHV A;  1V97 A;  2Q4W A;  3NVY B;  2BVG A;  1W1Q A;  1W1K A;  2VFU A;  1QLT A;  1FFU C;  2VFT A;  4PVK A;  2W3S A;  1N5W C;  1WVF A;  3HRD C;  3NVV B;  1DZN A;  1E8H A;  3W8Z A;  3DED A;  5FXF A;  4EC3 A;  5FXE A;  5HMR A;  2YVS A;  5D79 A;  1N63 C;  3AMZ A;  2W54 A;  4OAL A;  1E8G A;  3S1C A;  2O3G A;  2E3T A;  3GSY A;  3VTE A;  2W55 A;  2AXR A;  3AN1 A;  2OAI A;  2QKN A;  5G5G B;  4PYT A;  3FW9 A;  2PLI A;  3AM9 A;  2Q85 A;  1JRO A;  1FIQ B;  4BBY A;  2GQT A;  3B9J B;  1DII A;  1JRP A;  1N62 C;  3ETR B;  1T3Q C;  1W1R A;  2BVH A;  1HSK A;  2VFV A;  3EUB 3;  1W1J A;  3S1E A;  3BW7 A;  2P3H A;  3FW8 A;  3FWA A;  4O95 A;  2W3R A;  2BVF A;  3KJM A;  3JS8 A;  1N5X A;  3I99 A;  2QPM A;  3W8X A;  1E8F A;  3TSH A;  1W1M A;  3D2D A;  2VAO A;  3NRZ B;  2VFR A;  1N61 C;  3LAE A;  1VAO A; 
#chains in the Genus database with same CATH topology
 1WYG A;  3TX1 A;  2NQW A;  2MBR A;  3POP A;  3D2J A;  5AWV A;  4XLO A;  5AE2 A;  4JAY A;  3D2H A;  4MLA A;  1SB3 B;  4PVH A;  2Y08 A;  4JB1 A;  2R2Z A;  3EJB B;  1E0Y A;  3SR6 B;  4PWB A;  5I1W A;  4HG0 A;  3S1D A;  1N60 C;  1WVE A;  4BC9 A;  1ZXI C;  1FFV C;  1W1S A;  2RK5 A;  3NVW B;  3S1F A;  5HQX A;  1VDV A;  3PM9 A;  5G5H B;  3W8W A;  1F0X A;  2VFS A;  2PLS A;  5FXP A;  1W1L A;  3DQ0 A;  5ADZ A;  1RM6 B;  3PQB A;  5AE3 A;  5L6F A;  2UUU A;  3C0P A;  4DNS A;  1QLU A;  4BC7 A;  1FO4 A;  2P4P A;  4PWC A;  2P13 A;  4BCA A;  1I19 A;  1AHU A;  5AE1 A;  4ML8 A;  4PZF A;  3RJ8 A;  2I0K A;  3EJE B;  4UD8 A;  1ZR6 A;  3NVZ B;  2EXR A;  3LLB A;  5I1V A;  1MBT A;  5FXD A;  1DIQ A;  2IPI A;  1AHZ A;  2Y3R A;  4ZOH B;  1W1O A;  2GQU A;  3NS1 B;  4PVE A;  5L6G A;  3FW7 A;  4PVJ A;  1UXY A;  2R8D A;  3TSJ A;  5HHZ A;  3HSU A;  1MBB A;  1AHV A;  1V97 A;  2Q4W A;  3NVY B;  2BVG A;  1W1Q A;  1W1K A;  2VFU A;  1QLT A;  1FFU C;  2VFT A;  3RJA A;  4PVK A;  2Y3S A;  2W3S A;  1N5W C;  1WVF A;  3HRD C;  3NVV B;  1DZN A;  1E8H A;  3W8Z A;  3DED A;  5FXF A;  4EC3 A;  5FXE A;  5HMR A;  2YVS A;  5D79 A;  1N63 C;  3AMZ A;  2W54 A;  4OAL A;  1E8G A;  3S1C A;  2O3G A;  2E3T A;  3GSY A;  3VTE A;  2W55 A;  2AXR A;  3AN1 A;  2OAI A;  2QKN A;  5G5G B;  4PYT A;  3FW9 A;  2PLI A;  5K8E A;  3AM9 A;  2Q85 A;  1JRO A;  1FIQ B;  4BBY A;  2GQT A;  3B9J B;  1DII A;  1JRP A;  1N62 C;  3ETR B;  1T3Q C;  1W1R A;  2BVH A;  1HSK A;  2VFV A;  3EUB 3;  2UUV A;  1W1J A;  3S1E A;  3BW7 A;  2P3H A;  3FW8 A;  2WDW A;  3FWA A;  4O95 A;  2W3R A;  2BVF A;  3KJM A;  3JS8 A;  2Y4G A;  1N5X A;  3I99 A;  3EJD B;  2QPM A;  3W8X A;  1E8F A;  3TSH A;  1W1M A;  3D2D A;  2VAO A;  3NRZ B;  2VFR A;  1N61 C;  3LAE A;  1VAO A; 
#chains in the Genus database with same CATH homology
 1WYG A;  3TX1 A;  2NQW A;  2MBR A;  3POP A;  3D2J A;  5AWV A;  4XLO A;  5AE2 A;  4JAY A;  3D2H A;  4MLA A;  1SB3 B;  4PVH A;  2Y08 A;  4JB1 A;  2R2Z A;  1E0Y A;  3SR6 B;  4PWB A;  5I1W A;  4HG0 A;  3S1D A;  1N60 C;  1WVE A;  4BC9 A;  1ZXI C;  1FFV C;  1W1S A;  2RK5 A;  3NVW B;  3S1F A;  5HQX A;  1VDV A;  3PM9 A;  5G5H B;  3W8W A;  1F0X A;  2VFS A;  2PLS A;  5FXP A;  1W1L A;  3DQ0 A;  5ADZ A;  1RM6 B;  3PQB A;  5AE3 A;  5L6F A;  2UUU A;  3C0P A;  4DNS A;  1QLU A;  4BC7 A;  1FO4 A;  2P4P A;  4PWC A;  2P13 A;  4BCA A;  1I19 A;  1AHU A;  5AE1 A;  4ML8 A;  4PZF A;  3RJ8 A;  2I0K A;  4UD8 A;  1ZR6 A;  3NVZ B;  2EXR A;  3LLB A;  5I1V A;  1MBT A;  5FXD A;  1DIQ A;  2IPI A;  1AHZ A;  2Y3R A;  4ZOH B;  1W1O A;  2GQU A;  3NS1 B;  4PVE A;  5L6G A;  3FW7 A;  4PVJ A;  1UXY A;  2R8D A;  3TSJ A;  5HHZ A;  3HSU A;  1MBB A;  1AHV A;  1V97 A;  2Q4W A;  3NVY B;  2BVG A;  1W1Q A;  1W1K A;  2VFU A;  1QLT A;  1FFU C;  2VFT A;  3RJA A;  4PVK A;  2Y3S A;  2W3S A;  1N5W C;  1WVF A;  3HRD C;  3NVV B;  1DZN A;  1E8H A;  3W8Z A;  3DED A;  5FXF A;  4EC3 A;  5FXE A;  5HMR A;  2YVS A;  5D79 A;  1N63 C;  3AMZ A;  2W54 A;  4OAL A;  1E8G A;  3S1C A;  2O3G A;  2E3T A;  3GSY A;  3VTE A;  2W55 A;  2AXR A;  3AN1 A;  2OAI A;  2QKN A;  5G5G B;  4PYT A;  3FW9 A;  2PLI A;  5K8E A;  3AM9 A;  2Q85 A;  1JRO A;  1FIQ B;  4BBY A;  2GQT A;  3B9J B;  1DII A;  1JRP A;  1N62 C;  3ETR B;  1T3Q C;  1W1R A;  2BVH A;  1HSK A;  2VFV A;  3EUB 3;  2UUV A;  1W1J A;  3S1E A;  3BW7 A;  2P3H A;  3FW8 A;  2WDW A;  3FWA A;  4O95 A;  2W3R A;  2BVF A;  3KJM A;  3JS8 A;  2Y4G A;  1N5X A;  3I99 A;  2QPM A;  3W8X A;  1E8F A;  3TSH A;  1W1M A;  3D2D A;  2VAO A;  3NRZ B;  2VFR A;  1N61 C;  3LAE A;  1VAO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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