2O3GA

Structural genomics, the crystal structure of a conserved putative domain from neisseria meningitidis mc58
Total Genus 15

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
76
structure length
76
Chain Sequence
ESLTVEGALEYVELAPQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIERVKITKLP

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Membrane protein
source organism Neisseria meningitidis
publication title The crystal structure of a conserved putative domain from Neisseria meningitidis MC58
rcsb
molecule keywords Putative protein
total genus 15
structure length 76
sequence length 76
ec nomenclature
pdb deposition date 2006-12-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03471 CorC_HlyC Transporter associated domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 2o3gA00
3KJMA 1AHZA 1DIQA 3JS8A 2R2ZA 1N62C 1QLTA 2E3TA 1N5XA 5ADZA 3NS1B 1AHVA 5AE2A 3NVZB 3W8XA 2NQWA 5FXFA 1QLUA 3NVYB 3S1FA 3W8WA 1AHUA 3AMZA 2P13A 2VAOA 3I99A 5HMRA 2Q4WA 5FXPA 1N60C 4MLAA 2GQUA 1FO4A 3NVWB 3NVVB 1V97A 2OAIA 4JAYA 2R8DA 3TX1A 3AM9A 1N63C 1JRPA 1HSKA 2GQTA 2P4PA 4OALA 4HG0A 4BC9A 1E8HA 5FXDA 1W1SA 2BVFA 4BC7A 1WVFA 4BBYA 5G5GB 4ML8A 2BVHA 1N61C 5HQXA 2MBRA 2O3GA 1W1JA 1SB3B 1ZR6A 2RK5A 3W8ZA 1MBTA 1DZNA 2W54A 1JROA 5AE1A 1VDVA 2VFSA 4ZOHB 2VFTA 3S1CA 3HRDC 1I19A 5HHZA 2P3HA 3AN1A 4JB1A 3SR6B 1FIQB 2EXRA 4BCAA 1E8FA 1T3QC 3EUB3 1DIIA 2W3SA 2W55A 3LAEA 1FFVC 4PYTA 5FXEA 3S1DA 1FFUC 3BW7A 2VFVA 1W1QA 1WVEA 2YVSA 4XLOA 5AE3A 3LLBA 1VAOA 1UXYA 1W1RA 1W1KA 2VFUA 2QKNA 1E0YA 3PM9A 1W1OA 2W3RA 3DEDA 5G5HB 2PLSA 2I0KA 3NRZB 1RM6B 3C0PA 4O95A 1E8GA 2VFRA 3B9JB 2PLIA 3S1EA 2QPMA 1W1LA 3ETRB 1WYGA 1F0XA 1W1MA 1ZXIC 2AXRA 1MBBA 2Q85A 1N5WC 3DQ0A 2BVGA
chains in the Genus database with same CATH superfamily
5L6FA 3KJMA 3POPA 1AHZA 1DIQA 3JS8A 2R2ZA 1N62C 1QLTA 2E3TA 1N5XA 2Y4GA 5ADZA 3NS1B 1AHVA 2Y3RA 2IPIA 3D2HA 5AE2A 3FWAA 3NVZB 3W8XA 2NQWA 5FXFA 5K8EA 1QLUA 3NVYB 3VTEA 3S1FA 3W8WA 1AHUA 3AMZA 2P13A 2VAOA 3I99A 5HMRA 2Q4WA 5FXPA 1N60C 2UUUA 4MLAA 5D79A 2GQUA 1FO4A 3NVWB 4PZFA 3NVVB 1V97A 2OAIA 4JAYA 2R8DA 3TX1A 5L6GA 3AM9A 1N63C 1JRPA 1HSKA 2GQTA 2P4PA 4OALA 3FW9A 4HG0A 4BC9A 1E8HA 5FXDA 1W1SA 2BVFA 4BC7A 1WVFA 4BBYA 5G5GB 3FW8A 4ML8A 4PVEA 2BVHA 3RJAA 1N61C 3RJ8A 5HQXA 5I1WA 2MBRA 2O3GA 4PWBA 1W1JA 1SB3B 1ZR6A 4PVHA 4EC3A 2RK5A 3W8ZA 1MBTA 4DNSA 1DZNA 2W54A 1JROA 5AE1A 1VDVA 2VFSA 3D2JA 3HSUA 2UUVA 3PQBA 4ZOHB 2Y08A 2VFTA 3S1CA 3HRDC 1I19A 5HHZA 2P3HA 3TSJA 3AN1A 4JB1A 3SR6B 5AWVA 1FIQB 2EXRA 4BCAA 1E8FA 1T3QC 3EUB3 1DIIA 3GSYA 2W3SA 2W55A 3LAEA 1FFVC 4PYTA 3TSHA 4PVKA 5FXEA 2Y3SA 3S1DA 1FFUC 3BW7A 2VFVA 1W1QA 1WVEA 2YVSA 4XLOA 5AE3A 3LLBA 1VAOA 4PVJA 1UXYA 1W1RA 1W1KA 2VFUA 2QKNA 3D2DA 1E0YA 3PM9A 1W1OA 2W3RA 3DEDA 5G5HB 2PLSA 3FW7A 2I0KA 3NRZB 1RM6B 3C0PA 4O95A 4UD8A 1E8GA 5I1VA 2VFRA 3B9JB 2PLIA 3S1EA 2QPMA 1W1LA 3ETRB 1WYGA 1F0XA 1W1MA 1ZXIC 2AXRA 1MBBA 2WDWA 2Q85A 1N5WC 4PWCA 3DQ0A 2BVGA
chains in the Genus database with same CATH topology
5L6FA 3KJMA 3POPA 1AHZA 1DIQA 3JS8A 2R2ZA 1N62C 1QLTA 2E3TA 1N5XA 2Y4GA 5ADZA 3NS1B 1AHVA 2Y3RA 2IPIA 3D2HA 5AE2A 3FWAA 3NVZB 3W8XA 2NQWA 5FXFA 5K8EA 1QLUA 3NVYB 3VTEA 3S1FA 3W8WA 1AHUA 3AMZA 2P13A 2VAOA 3I99A 5HMRA 2Q4WA 5FXPA 1N60C 2UUUA 4MLAA 5D79A 2GQUA 1FO4A 3NVWB 4PZFA 3NVVB 1V97A 2OAIA 4JAYA 2R8DA 3TX1A 5L6GA 3AM9A 1N63C 1JRPA 1HSKA 2GQTA 2P4PA 4OALA 3FW9A 4HG0A 4BC9A 1E8HA 5FXDA 1W1SA 2BVFA 4BC7A 1WVFA 4BBYA 5G5GB 3FW8A 4ML8A 4PVEA 2BVHA 3RJAA 1N61C 3RJ8A 5HQXA 5I1WA 2MBRA 2O3GA 4PWBA 1W1JA 1SB3B 1ZR6A 4PVHA 4EC3A 2RK5A 3W8ZA 1MBTA 4DNSA 1DZNA 2W54A 1JROA 5AE1A 1VDVA 2VFSA 3D2JA 3HSUA 2UUVA 3PQBA 4ZOHB 2Y08A 2VFTA 3S1CA 3HRDC 1I19A 5HHZA 2P3HA 3TSJA 3AN1A 4JB1A 3SR6B 5AWVA 1FIQB 2EXRA 4BCAA 1E8FA 1T3QC 3EUB3 1DIIA 3GSYA 2W3SA 2W55A 3LAEA 1FFVC 4PYTA 3TSHA 4PVKA 5FXEA 2Y3SA 3S1DA 1FFUC 3BW7A 2VFVA 1W1QA 1WVEA 2YVSA 4XLOA 5AE3A 3LLBA 1VAOA 4PVJA 1UXYA 1W1RA 1W1KA 2VFUA 2QKNA 3D2DA 1E0YA 3PM9A 1W1OA 2W3RA 3DEDA 5G5HB 2PLSA 3FW7A 2I0KA 3NRZB 1RM6B 3C0PA 4O95A 4UD8A 1E8GA 5I1VA 2VFRA 3B9JB 2PLIA 3S1EA 2QPMA 1W1LA 3ETRB 1WYGA 1F0XA 1W1MA 1ZXIC 2AXRA 1MBBA 2WDWA 2Q85A 1N5WC 4PWCA 3DQ0A 2BVGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KJM A;  1AHZ A;  1DIQ A;  3JS8 A;  2R2Z A;  1N62 C;  1QLT A;  2E3T A;  1N5X A;  5ADZ A;  3NS1 B;  1AHV A;  5AE2 A;  3NVZ B;  3W8X A;  2NQW A;  5FXF A;  1QLU A;  3NVY B;  3S1F A;  3W8W A;  1AHU A;  3AMZ A;  2P13 A;  2VAO A;  3I99 A;  5HMR A;  2Q4W A;  5FXP A;  1N60 C;  4MLA A;  2GQU A;  1FO4 A;  3NVW B;  3NVV B;  1V97 A;  2OAI A;  4JAY A;  2R8D A;  3TX1 A;  3AM9 A;  1N63 C;  1JRP A;  1HSK A;  2GQT A;  2P4P A;  4OAL A;  4HG0 A;  4BC9 A;  1E8H A;  5FXD A;  1W1S A;  2BVF A;  4BC7 A;  1WVF A;  4BBY A;  5G5G B;  4ML8 A;  2BVH A;  1N61 C;  5HQX A;  2MBR A;  2O3G A;  1W1J A;  1SB3 B;  1ZR6 A;  2RK5 A;  3W8Z A;  1MBT A;  1DZN A;  2W54 A;  1JRO A;  5AE1 A;  1VDV A;  2VFS A;  4ZOH B;  2VFT A;  3S1C A;  3HRD C;  1I19 A;  5HHZ A;  2P3H A;  3AN1 A;  4JB1 A;  3SR6 B;  1FIQ B;  2EXR A;  4BCA A;  1E8F A;  1T3Q C;  3EUB 3;  1DII A;  2W3S A;  2W55 A;  3LAE A;  1FFV C;  4PYT A;  5FXE A;  3S1D A;  1FFU C;  3BW7 A;  2VFV A;  1W1Q A;  1WVE A;  2YVS A;  4XLO A;  5AE3 A;  3LLB A;  1VAO A;  1UXY A;  1W1R A;  1W1K A;  2VFU A;  2QKN A;  1E0Y A;  3PM9 A;  1W1O A;  2W3R A;  3DED A;  5G5H B;  2PLS A;  2I0K A;  3NRZ B;  1RM6 B;  3C0P A;  4O95 A;  1E8G A;  2VFR A;  3B9J B;  2PLI A;  3S1E A;  2QPM A;  1W1L A;  3ETR B;  1WYG A;  1F0X A;  1W1M A;  1ZXI C;  2AXR A;  1MBB A;  2Q85 A;  1N5W C;  3DQ0 A;  2BVG A; 
#chains in the Genus database with same CATH topology
 5L6F A;  3KJM A;  3POP A;  1AHZ A;  1DIQ A;  3JS8 A;  2R2Z A;  1N62 C;  1QLT A;  2E3T A;  1N5X A;  2Y4G A;  5ADZ A;  3NS1 B;  1AHV A;  2Y3R A;  2IPI A;  3D2H A;  5AE2 A;  3FWA A;  3NVZ B;  3W8X A;  2NQW A;  5FXF A;  5K8E A;  1QLU A;  3NVY B;  3VTE A;  3S1F A;  3W8W A;  1AHU A;  3AMZ A;  2P13 A;  2VAO A;  3I99 A;  5HMR A;  2Q4W A;  5FXP A;  1N60 C;  2UUU A;  4MLA A;  5D79 A;  2GQU A;  1FO4 A;  3NVW B;  4PZF A;  3NVV B;  1V97 A;  2OAI A;  4JAY A;  2R8D A;  3TX1 A;  5L6G A;  3AM9 A;  1N63 C;  1JRP A;  1HSK A;  2GQT A;  2P4P A;  4OAL A;  3FW9 A;  4HG0 A;  4BC9 A;  1E8H A;  5FXD A;  1W1S A;  2BVF A;  4BC7 A;  1WVF A;  4BBY A;  5G5G B;  3FW8 A;  4ML8 A;  4PVE A;  2BVH A;  3RJA A;  1N61 C;  3RJ8 A;  5HQX A;  5I1W A;  2MBR A;  2O3G A;  4PWB A;  1W1J A;  1SB3 B;  1ZR6 A;  4PVH A;  4EC3 A;  2RK5 A;  3W8Z A;  1MBT A;  4DNS A;  1DZN A;  2W54 A;  1JRO A;  5AE1 A;  1VDV A;  2VFS A;  3D2J A;  3HSU A;  2UUV A;  3PQB A;  4ZOH B;  2Y08 A;  2VFT A;  3S1C A;  3HRD C;  1I19 A;  5HHZ A;  2P3H A;  3TSJ A;  3AN1 A;  4JB1 A;  3SR6 B;  5AWV A;  1FIQ B;  2EXR A;  4BCA A;  1E8F A;  1T3Q C;  3EUB 3;  1DII A;  3GSY A;  2W3S A;  2W55 A;  3LAE A;  1FFV C;  4PYT A;  3TSH A;  4PVK A;  5FXE A;  2Y3S A;  3S1D A;  1FFU C;  3BW7 A;  2VFV A;  1W1Q A;  1WVE A;  2YVS A;  4XLO A;  5AE3 A;  3LLB A;  1VAO A;  4PVJ A;  1UXY A;  1W1R A;  1W1K A;  2VFU A;  2QKN A;  3D2D A;  1E0Y A;  3PM9 A;  1W1O A;  2W3R A;  3DED A;  5G5H B;  2PLS A;  3FW7 A;  2I0K A;  3NRZ B;  1RM6 B;  3C0P A;  4O95 A;  4UD8 A;  1E8G A;  5I1V A;  2VFR A;  3B9J B;  2PLI A;  3S1E A;  2QPM A;  1W1L A;  3ETR B;  1WYG A;  1F0X A;  1W1M A;  1ZXI C;  2AXR A;  1MBB A;  2WDW A;  2Q85 A;  1N5W C;  4PWC A;  3DQ0 A;  2BVG A; 
#chains in the Genus database with same CATH homology
 5L6F A;  3KJM A;  3POP A;  1AHZ A;  1DIQ A;  3JS8 A;  2R2Z A;  1N62 C;  1QLT A;  2E3T A;  1N5X A;  2Y4G A;  5ADZ A;  3NS1 B;  1AHV A;  2Y3R A;  2IPI A;  3D2H A;  5AE2 A;  3FWA A;  3NVZ B;  3W8X A;  2NQW A;  5FXF A;  5K8E A;  1QLU A;  3NVY B;  3VTE A;  3S1F A;  3W8W A;  1AHU A;  3AMZ A;  2P13 A;  2VAO A;  3I99 A;  5HMR A;  2Q4W A;  5FXP A;  1N60 C;  2UUU A;  4MLA A;  5D79 A;  2GQU A;  1FO4 A;  3NVW B;  4PZF A;  3NVV B;  1V97 A;  2OAI A;  4JAY A;  2R8D A;  3TX1 A;  5L6G A;  3AM9 A;  1N63 C;  1JRP A;  1HSK A;  2GQT A;  2P4P A;  4OAL A;  3FW9 A;  4HG0 A;  4BC9 A;  1E8H A;  5FXD A;  1W1S A;  2BVF A;  4BC7 A;  1WVF A;  4BBY A;  5G5G B;  3FW8 A;  4ML8 A;  4PVE A;  2BVH A;  3RJA A;  1N61 C;  3RJ8 A;  5HQX A;  5I1W A;  2MBR A;  2O3G A;  4PWB A;  1W1J A;  1SB3 B;  1ZR6 A;  4PVH A;  4EC3 A;  2RK5 A;  3W8Z A;  1MBT A;  4DNS A;  1DZN A;  2W54 A;  1JRO A;  5AE1 A;  1VDV A;  2VFS A;  3D2J A;  3HSU A;  2UUV A;  3PQB A;  4ZOH B;  2Y08 A;  2VFT A;  3S1C A;  3HRD C;  1I19 A;  5HHZ A;  2P3H A;  3TSJ A;  3AN1 A;  4JB1 A;  3SR6 B;  5AWV A;  1FIQ B;  2EXR A;  4BCA A;  1E8F A;  1T3Q C;  3EUB 3;  1DII A;  3GSY A;  2W3S A;  2W55 A;  3LAE A;  1FFV C;  4PYT A;  3TSH A;  4PVK A;  5FXE A;  2Y3S A;  3S1D A;  1FFU C;  3BW7 A;  2VFV A;  1W1Q A;  1WVE A;  2YVS A;  4XLO A;  5AE3 A;  3LLB A;  1VAO A;  4PVJ A;  1UXY A;  1W1R A;  1W1K A;  2VFU A;  2QKN A;  3D2D A;  1E0Y A;  3PM9 A;  1W1O A;  2W3R A;  3DED A;  5G5H B;  2PLS A;  3FW7 A;  2I0K A;  3NRZ B;  1RM6 B;  3C0P A;  4O95 A;  4UD8 A;  1E8G A;  5I1V A;  2VFR A;  3B9J B;  2PLI A;  3S1E A;  2QPM A;  1W1L A;  3ETR B;  1WYG A;  1F0X A;  1W1M A;  1ZXI C;  2AXR A;  1MBB A;  2WDW A;  2Q85 A;  1N5W C;  4PWC A;  3DQ0 A;  2BVG A; 
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similar chains in the pdb database (?% sequence similarity)

 
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