3KJMA

Leu492ala mutant of maize cytokinin oxidase/dehydrogenase complexed with phenylurea inhibitor cppu
Total Genus 170
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
170
sequence length
502
structure length
496
Chain Sequence
PWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTADLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRLVYTDFAAFSADQERLTAPRPASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYAARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Phenyl- and benzylurea cytokinins as competitive inhibitors of cytokinin oxidase/dehydrogenase: a structural study.
pubmed doi rcsb
molecule tags Oxidoreductase/inhibitor
source organism Zea mays
molecule keywords Cytokinin dehydrogenase 1
total genus 170
structure length 496
sequence length 502
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2009-11-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 3kjmA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 3kjmA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 3kjmA03
4PVHA 1FFVC 1MBBA 2Q85A 1HSKA 4PWCA 2P3HA 1QLUA 1WYGA 3S1CA 2BVGA 1AHUA 5FXPA 5AE3A 5G5GB 2OAIA 1ZR6A 2VFUA 1AHVA 3TSJA 1RM6B 1F0XA 1N5WC 1MBTA 1AHZA 4O95A 3FW8A 5HQXA 3S1DA 1SB3B 1E8HA 1W1KA 2VFSA 1FIQB 3EUB3 2EXRA 4OALA 2BVHA 1W1MA 4PYTA 5AE1A 1W1OA 1E0YA 2GQTA 2VFRA 3C0PA 3FWAA 3I99A 4BBYA 2VAOA 1W1LA 2VFVA 3S1FA 3SR6B 1N63C 3VTEA 1JROA 5ADZA 2RK5A 2GQUA 1W1JA 1WVEA 3NVZB 3TSHA 1DZNA 4DNSA 1WVFA 3D2DA 1UXYA 2I0KA 1N61C 4PWBA 3B9JB 3DQ0A 1FO4A 3NVWB 1DIQA 4JAYA 3S1EA 2W3RA 1QLTA 4PVKA 3HRDC 3AM9A 1T3QC 2R2ZA 2YVSA 1W1RA 3D2HA 3NRZB 4PVEA 3ETRB 4HG0A 3FW7A 2BVFA 2QKNA 2VFTA 1N62C 3JS8A 4MLAA 3NS1B 3TX1A 5AE2A 2P13A 4ZOHB 1W1SA 4BCAA 2Q4WA 3W8WA 5HHZA 2P4PA 5HMRA 3NVVB 5D79A 1FFUC 2AXRA 4XLOA 2NQWA 3AN1A 1E8GA 1VAOA 4ML8A 5FXEA 2O3GA 3GSYA 3FW9A 4PVJA 2E3TA 2MBRA 2W55A 5FXDA 5FXFA 3KJMA 1ZXIC 2W3SA 3LLBA 1DIIA 2QPMA 1JRPA 3D2JA 4BC7A 1V97A 1E8FA 3W8XA 4JB1A 3AMZA 3DEDA 2R8DA 3BW7A 1N60C 3PM9A 1N5XA 4PZFA 2W54A 3LAEA 1I19A 1W1QA 4BC9A 4EC3A 1VDVA 5G5HB 2PLSA 3NVYB 3W8ZA 2PLIA 4UD8A
chains in the Genus database with same CATH superfamily
4PVHA 1FFVC 1MBBA 2Q85A 1HSKA 4PWCA 2P3HA 5L6FA 1QLUA 1WYGA 3S1CA 2BVGA 1AHUA 5FXPA 5AE3A 5G5GB 2OAIA 1ZR6A 2VFUA 1AHVA 3TSJA 3HSUA 1RM6B 1F0XA 1N5WC 1MBTA 1AHZA 4O95A 3FW8A 5HQXA 3S1DA 1SB3B 2IPIA 2WDWA 1E8HA 3EJBB 1W1KA 2VFSA 1FIQB 3EUB3 2EXRA 4OALA 2UUUA 2BVHA 3EJEB 1W1MA 4PYTA 5AE1A 1W1OA 1E0YA 2GQTA 2VFRA 3C0PA 3FWAA 3I99A 4BBYA 3POPA 2VAOA 1W1LA 2VFVA 3S1FA 3SR6B 1N63C 5K8EA 5AWVA 3VTEA 1JROA 5ADZA 2RK5A 2GQUA 3RJAA 1W1JA 1WVEA 3NVZB 3TSHA 1DZNA 4DNSA 1WVFA 3D2DA 3PQBA 1UXYA 2UUVA 2I0KA 1N61C 4PWBA 3B9JB 3DQ0A 1FO4A 3NVWB 1DIQA 4JAYA 3S1EA 2W3RA 1QLTA 4PVKA 3HRDC 3AM9A 1T3QC 2R2ZA 2YVSA 2Y3RA 1W1RA 3D2HA 3NRZB 4PVEA 3ETRB 4HG0A 3FW7A 2BVFA 2QKNA 2VFTA 1N62C 3JS8A 4MLAA 3NS1B 3TX1A 5AE2A 2P13A 4ZOHB 1W1SA 4BCAA 2Q4WA 3W8WA 5HHZA 2P4PA 3NVVB 5HMRA 5D79A 1FFUC 2AXRA 4XLOA 2NQWA 3AN1A 1E8GA 1VAOA 4ML8A 5FXEA 2O3GA 3GSYA 3FW9A 4PVJA 2E3TA 2MBRA 5I1VA 2W55A 5FXDA 5FXFA 3KJMA 2Y3SA 1ZXIC 2Y4GA 2W3SA 3LLBA 1DIIA 2QPMA 1JRPA 5L6GA 3D2JA 4BC7A 1V97A 5I1WA 3RJ8A 1E8FA 3W8XA 4JB1A 3AMZA 3DEDA 2R8DA 3BW7A 1N60C 3PM9A 1N5XA 4PZFA 2W54A 3LAEA 1I19A 1W1QA 4BC9A 4EC3A 1VDVA 5G5HB 2PLSA 2Y08A 3NVYB 3W8ZA 3EJDB 2PLIA 4UD8A
chains in the Genus database with same CATH topology
4PVHA 1FFVC 1MBBA 2Q85A 1HSKA 4PWCA 2P3HA 5L6FA 1QLUA 1WYGA 3S1CA 2BVGA 1AHUA 5FXPA 5AE3A 5G5GB 2OAIA 1ZR6A 2VFUA 1AHVA 3TSJA 3HSUA 1RM6B 1F0XA 1N5WC 1MBTA 1AHZA 4O95A 3FW8A 5HQXA 3S1DA 1SB3B 2IPIA 2WDWA 1E8HA 1W1KA 2VFSA 1FIQB 3EUB3 2EXRA 4OALA 2UUUA 2BVHA 1W1MA 4PYTA 5AE1A 1W1OA 1E0YA 2GQTA 2VFRA 3C0PA 3FWAA 3I99A 4BBYA 3POPA 2VAOA 1W1LA 2VFVA 3S1FA 3SR6B 1N63C 5K8EA 5AWVA 3VTEA 1JROA 5ADZA 2RK5A 2GQUA 3RJAA 1W1JA 1WVEA 3NVZB 3TSHA 1DZNA 4DNSA 1WVFA 3D2DA 3PQBA 1UXYA 2UUVA 2I0KA 1N61C 4PWBA 3B9JB 3DQ0A 1FO4A 3NVWB 1DIQA 4JAYA 3S1EA 2W3RA 1QLTA 4PVKA 3HRDC 3AM9A 1T3QC 2R2ZA 2YVSA 2Y3RA 1W1RA 3D2HA 3NRZB 4PVEA 3ETRB 4HG0A 3FW7A 2BVFA 2QKNA 2VFTA 1N62C 3JS8A 4MLAA 3NS1B 3TX1A 5AE2A 2P13A 4ZOHB 1W1SA 4BCAA 2Q4WA 3W8WA 5HHZA 2P4PA 5HMRA 3NVVB 5D79A 1FFUC 2AXRA 4XLOA 2NQWA 3AN1A 1E8GA 1VAOA 4ML8A 5FXEA 2O3GA 3GSYA 3FW9A 4PVJA 2E3TA 2MBRA 5I1VA 2W55A 5FXDA 5FXFA 3KJMA 2Y3SA 1ZXIC 2Y4GA 2W3SA 3LLBA 1DIIA 2QPMA 1JRPA 5L6GA 3D2JA 4BC7A 1V97A 5I1WA 3RJ8A 1E8FA 3W8XA 4JB1A 3AMZA 3DEDA 2R8DA 3BW7A 1N60C 3PM9A 1N5XA 4PZFA 2W54A 3LAEA 1I19A 1W1QA 4BC9A 4EC3A 1VDVA 5G5HB 2PLSA 2Y08A 3NVYB 3W8ZA 2PLIA 4UD8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4PVH A;  1FFV C;  1MBB A;  2Q85 A;  1HSK A;  4PWC A;  2P3H A;  1QLU A;  1WYG A;  3S1C A;  2BVG A;  1AHU A;  5FXP A;  5AE3 A;  5G5G B;  2OAI A;  1ZR6 A;  2VFU A;  1AHV A;  3TSJ A;  1RM6 B;  1F0X A;  1N5W C;  1MBT A;  1AHZ A;  4O95 A;  3FW8 A;  5HQX A;  3S1D A;  1SB3 B;  1E8H A;  1W1K A;  2VFS A;  1FIQ B;  3EUB 3;  2EXR A;  4OAL A;  2BVH A;  1W1M A;  4PYT A;  5AE1 A;  1W1O A;  1E0Y A;  2GQT A;  2VFR A;  3C0P A;  3FWA A;  3I99 A;  4BBY A;  2VAO A;  1W1L A;  2VFV A;  3S1F A;  3SR6 B;  1N63 C;  3VTE A;  1JRO A;  5ADZ A;  2RK5 A;  2GQU A;  1W1J A;  1WVE A;  3NVZ B;  3TSH A;  1DZN A;  4DNS A;  1WVF A;  3D2D A;  1UXY A;  2I0K A;  1N61 C;  4PWB A;  3B9J B;  3DQ0 A;  1FO4 A;  3NVW B;  1DIQ A;  4JAY A;  3S1E A;  2W3R A;  1QLT A;  4PVK A;  3HRD C;  3AM9 A;  1T3Q C;  2R2Z A;  2YVS A;  1W1R A;  3D2H A;  3NRZ B;  4PVE A;  3ETR B;  4HG0 A;  3FW7 A;  2BVF A;  2QKN A;  2VFT A;  1N62 C;  3JS8 A;  4MLA A;  3NS1 B;  3TX1 A;  5AE2 A;  2P13 A;  4ZOH B;  1W1S A;  4BCA A;  2Q4W A;  3W8W A;  5HHZ A;  2P4P A;  5HMR A;  3NVV B;  5D79 A;  1FFU C;  2AXR A;  4XLO A;  2NQW A;  3AN1 A;  1E8G A;  1VAO A;  4ML8 A;  5FXE A;  2O3G A;  3GSY A;  3FW9 A;  4PVJ A;  2E3T A;  2MBR A;  2W55 A;  5FXD A;  5FXF A;  3KJM A;  1ZXI C;  2W3S A;  3LLB A;  1DII A;  2QPM A;  1JRP A;  3D2J A;  4BC7 A;  1V97 A;  1E8F A;  3W8X A;  4JB1 A;  3AMZ A;  3DED A;  2R8D A;  3BW7 A;  1N60 C;  3PM9 A;  1N5X A;  4PZF A;  2W54 A;  3LAE A;  1I19 A;  1W1Q A;  4BC9 A;  4EC3 A;  1VDV A;  5G5H B;  2PLS A;  3NVY B;  3W8Z A;  2PLI A;  4UD8 A; 
#chains in the Genus database with same CATH topology
 4PVH A;  1FFV C;  1MBB A;  2Q85 A;  1HSK A;  4PWC A;  2P3H A;  5L6F A;  1QLU A;  1WYG A;  3S1C A;  2BVG A;  1AHU A;  5FXP A;  5AE3 A;  5G5G B;  2OAI A;  1ZR6 A;  2VFU A;  1AHV A;  3TSJ A;  3HSU A;  1RM6 B;  1F0X A;  1N5W C;  1MBT A;  1AHZ A;  4O95 A;  3FW8 A;  5HQX A;  3S1D A;  1SB3 B;  2IPI A;  2WDW A;  1E8H A;  3EJB B;  1W1K A;  2VFS A;  1FIQ B;  3EUB 3;  2EXR A;  4OAL A;  2UUU A;  2BVH A;  3EJE B;  1W1M A;  4PYT A;  5AE1 A;  1W1O A;  1E0Y A;  2GQT A;  2VFR A;  3C0P A;  3FWA A;  3I99 A;  4BBY A;  3POP A;  2VAO A;  1W1L A;  2VFV A;  3S1F A;  3SR6 B;  1N63 C;  5K8E A;  5AWV A;  3VTE A;  1JRO A;  5ADZ A;  2RK5 A;  2GQU A;  3RJA A;  1W1J A;  1WVE A;  3NVZ B;  3TSH A;  1DZN A;  4DNS A;  1WVF A;  3D2D A;  3PQB A;  1UXY A;  2UUV A;  2I0K A;  1N61 C;  4PWB A;  3B9J B;  3DQ0 A;  1FO4 A;  3NVW B;  1DIQ A;  4JAY A;  3S1E A;  2W3R A;  1QLT A;  4PVK A;  3HRD C;  3AM9 A;  1T3Q C;  2R2Z A;  2YVS A;  2Y3R A;  1W1R A;  3D2H A;  3NRZ B;  4PVE A;  3ETR B;  4HG0 A;  3FW7 A;  2BVF A;  2QKN A;  2VFT A;  1N62 C;  3JS8 A;  4MLA A;  3NS1 B;  3TX1 A;  5AE2 A;  2P13 A;  4ZOH B;  1W1S A;  4BCA A;  2Q4W A;  3W8W A;  5HHZ A;  2P4P A;  3NVV B;  5HMR A;  5D79 A;  1FFU C;  2AXR A;  4XLO A;  2NQW A;  3AN1 A;  1E8G A;  1VAO A;  4ML8 A;  5FXE A;  2O3G A;  3GSY A;  3FW9 A;  4PVJ A;  2E3T A;  2MBR A;  5I1V A;  2W55 A;  5FXD A;  5FXF A;  3KJM A;  2Y3S A;  1ZXI C;  2Y4G A;  2W3S A;  3LLB A;  1DII A;  2QPM A;  1JRP A;  5L6G A;  3D2J A;  4BC7 A;  1V97 A;  5I1W A;  3RJ8 A;  1E8F A;  3W8X A;  4JB1 A;  3AMZ A;  3DED A;  2R8D A;  3BW7 A;  1N60 C;  3PM9 A;  1N5X A;  4PZF A;  2W54 A;  3LAE A;  1I19 A;  1W1Q A;  4BC9 A;  4EC3 A;  1VDV A;  5G5H B;  2PLS A;  2Y08 A;  3NVY B;  3W8Z A;  3EJD B;  2PLI A;  4UD8 A; 
#chains in the Genus database with same CATH homology
 4PVH A;  1FFV C;  1MBB A;  2Q85 A;  1HSK A;  4PWC A;  2P3H A;  5L6F A;  1QLU A;  1WYG A;  3S1C A;  2BVG A;  1AHU A;  5FXP A;  5AE3 A;  5G5G B;  2OAI A;  1ZR6 A;  2VFU A;  1AHV A;  3TSJ A;  3HSU A;  1RM6 B;  1F0X A;  1N5W C;  1MBT A;  1AHZ A;  4O95 A;  3FW8 A;  5HQX A;  3S1D A;  1SB3 B;  2IPI A;  2WDW A;  1E8H A;  1W1K A;  2VFS A;  1FIQ B;  3EUB 3;  2EXR A;  4OAL A;  2UUU A;  2BVH A;  1W1M A;  4PYT A;  5AE1 A;  1W1O A;  1E0Y A;  2GQT A;  2VFR A;  3C0P A;  3FWA A;  3I99 A;  4BBY A;  3POP A;  2VAO A;  1W1L A;  2VFV A;  3S1F A;  3SR6 B;  1N63 C;  5K8E A;  5AWV A;  3VTE A;  1JRO A;  5ADZ A;  2RK5 A;  2GQU A;  3RJA A;  1W1J A;  1WVE A;  3NVZ B;  3TSH A;  1DZN A;  4DNS A;  1WVF A;  3D2D A;  3PQB A;  1UXY A;  2UUV A;  2I0K A;  1N61 C;  4PWB A;  3B9J B;  3DQ0 A;  1FO4 A;  3NVW B;  1DIQ A;  4JAY A;  3S1E A;  2W3R A;  1QLT A;  4PVK A;  3HRD C;  3AM9 A;  1T3Q C;  2R2Z A;  2YVS A;  2Y3R A;  1W1R A;  3D2H A;  3NRZ B;  4PVE A;  3ETR B;  4HG0 A;  3FW7 A;  2BVF A;  2QKN A;  2VFT A;  1N62 C;  3JS8 A;  4MLA A;  3NS1 B;  3TX1 A;  5AE2 A;  2P13 A;  4ZOH B;  1W1S A;  4BCA A;  2Q4W A;  3W8W A;  5HHZ A;  2P4P A;  5HMR A;  3NVV B;  5D79 A;  1FFU C;  2AXR A;  4XLO A;  2NQW A;  3AN1 A;  1E8G A;  1VAO A;  4ML8 A;  5FXE A;  2O3G A;  3GSY A;  3FW9 A;  4PVJ A;  2E3T A;  2MBR A;  5I1V A;  2W55 A;  5FXD A;  5FXF A;  3KJM A;  2Y3S A;  1ZXI C;  2Y4G A;  2W3S A;  3LLB A;  1DII A;  2QPM A;  1JRP A;  5L6G A;  3D2J A;  4BC7 A;  1V97 A;  5I1W A;  3RJ8 A;  1E8F A;  3W8X A;  4JB1 A;  3AMZ A;  3DED A;  2R8D A;  3BW7 A;  1N60 C;  3PM9 A;  1N5X A;  4PZF A;  2W54 A;  3LAE A;  1I19 A;  1W1Q A;  4BC9 A;  4EC3 A;  1VDV A;  5G5H B;  2PLS A;  2Y08 A;  3NVY B;  3W8Z A;  2PLI A;  4UD8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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