5HHZA

Crystal structure of maize cytokinin oxidase/dehydrogenase 4 (zmcko4) in complex with 6-(3-methylpyrrol-1-yl)-9h-purine
Total Genus 147
50100150200250300350400450020406080100120140
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
147
sequence length
492
structure length
457
Chain Sequence
GGRLSVDASDIAEASRDFGGVARAEPMAVFHPRAAGDVAGLVGAAFRSARGFRVSARGHGHSISGQAQAAGGVVVDMSRVARALPVHSAALGGHYVDVWGGELWVDVLNWTLSHGGLAPRSWTDYLYLSVGGTLSNAGISGQAFHHGPQISNVYELDVVTGKGEVVTCSETENPDLFFGVLGGLGQFGIITRARIALERAPKRVRWIRALYSNFSEFTADQERLISLGRRFDYVEGFVVAAEGLSLKHHSSVLYCLEVTKNYDDETAGSVDQDVDTLLGELNFLPGTVFTTDLPYVDFLDRVHKAELKLRAKGMWEVPHPWLNLFVPASRIADFDRGVFRGVLAGGPVLIYPMNKHKWDPRSSAVTPDEEVFYLVAFLRSALPGAPESLEALARQNQRILDFCAGTGIGAKQYLPGHKARHEWAEHFGAARWDRFARLKAEFDPRAILAAGQGIFRP
50100150200250300350400450400300200100
050100Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (47-53)S1 (42-44)AH2 (74-86)TIV2 (96-99)TII1 (108-111)S3 (93-96)TI1 (87-90)AH5 (188-192)TIV3 (101-104)EMPTYS5 (132-134)TI2 (104-107)S4 (112-115)TI4 (145-148)AH3 (150-159)TIV4 (134-137)S6 (139-145)TII3 (352-355)S14 (356-362)3H1 (195-197)TIV5 (159-162)TVIII1 (169-172)S11 (249-257)S8 (199-206)TI5 (206-209)S12 (283-290)AH6 (220-226)S9 (211-215)TIV8 (217-220)TVIII2 (281-284)AH9 (363-380)TIV9 (273-280)TII2 (226-229)TI'1 (229-232)TI7 (231-234)AH8 (337-348)S10 (234-245)TI11 (332-335)AH7 (260-271)TI8 (290-293)TI9 (291-294)3H2 (314-317)TIV10 (381-384)TVIII3 (318-321)S13 (320-330)3H3 (396-398)TIV13 (408-411)AH10 (399-406)TI10 (331-334)TI14 (433-436)TIV11 (382-385)O1 (387-389)S15 (390-395)S16 (422-428)TII4 (456-459)TVIII4 (443-446)TIV1 (56-59)TI3 (135-138)S7 (163-165)AH4 (176-181)TIV7 (171-174)3H4 (429-431)TI13 (406-409)TI6 (215-218)S17 (445-451)S2 (67-70)Updating...
connected with : NaN
molecule tags Oxidoreductase
source organism Zea mays
publication title Cytokinin metabolism in maize: Novel evidence of cytokinin abundance, interconversions and formation of a new trans-zeatin metabolic product with a weak anticytokinin activity.
pubmed doi rcsb
molecule keywords Cytokinin dehydrogenase 4
total genus 147
structure length 457
sequence length 492
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2016-01-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 5hhzA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 5hhzA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 5hhzA03
4ZOHB 2RK5A 1FFVC 3PM9A 3S1DA 4OALA 1WVFA 1AHUA 1QLTA 4XLOA 1N61C 2VFRA 5AE1A 2PLSA 3NS1B 4ML8A 3LAEA 1WVEA 1N63C 1E8HA 3C0PA 5ADZA 1FO4A 1N60C 1QLUA 1UXYA 3GSYA 3AM9A 4MLAA 1ZR6A 2P3HA 1W1LA 5FXEA 4BBYA 1VAOA 1AHZA 3HRDC 3TSJA 3VTEA 2P4PA 2NQWA 3DEDA 2GQTA 3D2DA 3W8ZA 4O95A 3S1CA 1MBBA 3AMZA 2O3GA 2QKNA 3NVZB 2YVSA 3S1EA 2R2ZA 1W1SA 1W1MA 3D2JA 2PLIA 1DZNA 4UD8A 3TSHA 1SB3B 5FXFA 3LLBA 2BVFA 4DNSA 4BCAA 1MBTA 2BVGA 1E0YA 5G5GB 2E3TA 1AHVA 1N62C 3BW7A 4BC7A 4EC3A 3FW8A 1V97A 2MBRA 5G5HB 4PWCA 1F0XA 2W3RA 3KJMA 3NRZB 4JAYA 5AE3A 2P13A 3D2HA 1FIQB 5HMRA 4PWBA 3ETRB 2Q85A 1ZXIC 3W8XA 3AN1A 2AXRA 5HHZA 1I19A 3B9JB 3FWAA 5FXPA 4HG0A 1N5WC 3SR6B 1HSKA 1FFUC 5FXDA 5AE2A 3W8WA 4PVHA 2W55A 2BVHA 3NVVB 4PVKA 1W1JA 1T3QC 2VFUA 3S1FA 1N5XA 3FW9A 2W3SA 2Q4WA 4PYTA 1W1OA 3TX1A 4PVEA 5HQXA 1JRPA 3I99A 2QPMA 1JROA 1E8FA 2W54A 3FW7A 4PZFA 1E8GA 2I0KA 3NVYB 2GQUA 4JB1A 4PVJA 1DIIA 1WYGA 1W1KA 2EXRA 3EUB3 3JS8A 1VDVA 2VAOA 2VFVA 1W1QA 2VFSA 2OAIA 1RM6B 5D79A 1W1RA 2VFTA 3NVWB 3DQ0A 1DIQA 2R8DA 4BC9A
chains in the Genus database with same CATH superfamily
5AWVA 4ZOHB 2RK5A 1FFVC 3PM9A 3S1DA 4OALA 1WVFA 1AHUA 1QLTA 4XLOA 1N61C 2VFRA 5AE1A 3RJAA 2PLSA 3NS1B 4ML8A 3LAEA 1WVEA 1N63C 3PQBA 5I1VA 1E8HA 3C0PA 5ADZA 1FO4A 1N60C 1QLUA 1UXYA 3GSYA 3AM9A 2WDWA 4MLAA 1ZR6A 2P3HA 1W1LA 5FXEA 4BBYA 1VAOA 1AHZA 3HRDC 3EJBB 3TSJA 3VTEA 2P4PA 2NQWA 3DEDA 2GQTA 3D2DA 3W8ZA 4O95A 3S1CA 1MBBA 3AMZA 2O3GA 2Y08A 2QKNA 3NVZB 2YVSA 3S1EA 2R2ZA 1W1SA 1W1MA 3D2JA 2PLIA 1DZNA 2Y3SA 4UD8A 3TSHA 1SB3B 2UUUA 5FXFA 3LLBA 2BVFA 4DNSA 4BCAA 5K8EA 1MBTA 2BVGA 1E0YA 5G5GB 2E3TA 1AHVA 1N62C 3BW7A 4BC7A 4EC3A 3FW8A 1V97A 2MBRA 5G5HB 4PWCA 1F0XA 2W3RA 2UUVA 3KJMA 3NRZB 4JAYA 5AE3A 2Y3RA 2P13A 3D2HA 1FIQB 5HMRA 4PWBA 3ETRB 2Q85A 1ZXIC 3W8XA 3AN1A 2AXRA 5HHZA 1I19A 3B9JB 3FWAA 5FXPA 4HG0A 1N5WC 2IPIA 5I1WA 3SR6B 1HSKA 3EJEB 1FFUC 5FXDA 5AE2A 3W8WA 4PVHA 2W55A 3HSUA 2BVHA 3NVVB 4PVKA 1W1JA 1T3QC 2VFUA 3S1FA 1N5XA 3FW9A 2W3SA 2Q4WA 4PYTA 1W1OA 3TX1A 4PVEA 5HQXA 1JRPA 2Y4GA 5L6FA 3I99A 2QPMA 1JROA 1E8FA 3POPA 2W54A 3FW7A 4PZFA 1E8GA 2I0KA 3NVYB 3EJDB 2GQUA 5L6GA 4JB1A 4PVJA 1DIIA 1WYGA 1W1KA 2EXRA 3EUB3 3JS8A 1VDVA 2VAOA 2VFVA 1W1QA 2VFSA 2OAIA 3RJ8A 1RM6B 5D79A 1W1RA 2VFTA 3NVWB 3DQ0A 1DIQA 2R8DA 4BC9A
chains in the Genus database with same CATH topology
5AWVA 4ZOHB 2RK5A 1FFVC 3PM9A 3S1DA 4OALA 1WVFA 1AHUA 1QLTA 4XLOA 1N61C 2VFRA 5AE1A 3RJAA 2PLSA 3NS1B 4ML8A 3LAEA 1WVEA 1N63C 3PQBA 5I1VA 1E8HA 3C0PA 5ADZA 1FO4A 1N60C 1QLUA 1UXYA 3GSYA 3AM9A 2WDWA 4MLAA 1ZR6A 2P3HA 1W1LA 5FXEA 4BBYA 1VAOA 1AHZA 3HRDC 3TSJA 3VTEA 2P4PA 2NQWA 3DEDA 2GQTA 3D2DA 3W8ZA 4O95A 3S1CA 1MBBA 3AMZA 2O3GA 2Y08A 2QKNA 3NVZB 2YVSA 3S1EA 2R2ZA 1W1SA 1W1MA 3D2JA 2PLIA 1DZNA 2Y3SA 4UD8A 3TSHA 1SB3B 2UUUA 5FXFA 3LLBA 2BVFA 4DNSA 4BCAA 5K8EA 1MBTA 2BVGA 1E0YA 5G5GB 2E3TA 1AHVA 1N62C 3BW7A 4BC7A 4EC3A 3FW8A 1V97A 2MBRA 5G5HB 4PWCA 1F0XA 2W3RA 2UUVA 3KJMA 3NRZB 4JAYA 5AE3A 2Y3RA 2P13A 3D2HA 1FIQB 5HMRA 4PWBA 3ETRB 2Q85A 1ZXIC 3W8XA 3AN1A 2AXRA 5HHZA 1I19A 3B9JB 3FWAA 5FXPA 4HG0A 1N5WC 2IPIA 5I1WA 3SR6B 1HSKA 1FFUC 5FXDA 5AE2A 3W8WA 4PVHA 2W55A 3HSUA 2BVHA 3NVVB 4PVKA 1W1JA 1T3QC 2VFUA 3S1FA 1N5XA 3FW9A 2W3SA 2Q4WA 4PYTA 1W1OA 3TX1A 4PVEA 5HQXA 1JRPA 2Y4GA 5L6FA 3I99A 2QPMA 1JROA 1E8FA 3POPA 2W54A 3FW7A 4PZFA 1E8GA 2I0KA 3NVYB 2GQUA 5L6GA 4JB1A 4PVJA 1DIIA 1WYGA 1W1KA 2EXRA 3EUB3 3JS8A 1VDVA 2VAOA 2VFVA 1W1QA 2VFSA 2OAIA 3RJ8A 1RM6B 5D79A 1W1RA 2VFTA 3NVWB 3DQ0A 1DIQA 2R8DA 4BC9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ZOH B;  2RK5 A;  1FFV C;  3PM9 A;  3S1D A;  4OAL A;  1WVF A;  1AHU A;  1QLT A;  4XLO A;  1N61 C;  2VFR A;  5AE1 A;  2PLS A;  3NS1 B;  4ML8 A;  3LAE A;  1WVE A;  1N63 C;  1E8H A;  3C0P A;  5ADZ A;  1FO4 A;  1N60 C;  1QLU A;  1UXY A;  3GSY A;  3AM9 A;  4MLA A;  1ZR6 A;  2P3H A;  1W1L A;  5FXE A;  4BBY A;  1VAO A;  1AHZ A;  3HRD C;  3TSJ A;  3VTE A;  2P4P A;  2NQW A;  3DED A;  2GQT A;  3D2D A;  3W8Z A;  4O95 A;  3S1C A;  1MBB A;  3AMZ A;  2O3G A;  2QKN A;  3NVZ B;  2YVS A;  3S1E A;  2R2Z A;  1W1S A;  1W1M A;  3D2J A;  2PLI A;  1DZN A;  4UD8 A;  3TSH A;  1SB3 B;  5FXF A;  3LLB A;  2BVF A;  4DNS A;  4BCA A;  1MBT A;  2BVG A;  1E0Y A;  5G5G B;  2E3T A;  1AHV A;  1N62 C;  3BW7 A;  4BC7 A;  4EC3 A;  3FW8 A;  1V97 A;  2MBR A;  5G5H B;  4PWC A;  1F0X A;  2W3R A;  3KJM A;  3NRZ B;  4JAY A;  5AE3 A;  2P13 A;  3D2H A;  1FIQ B;  5HMR A;  4PWB A;  3ETR B;  2Q85 A;  1ZXI C;  3W8X A;  3AN1 A;  2AXR A;  5HHZ A;  1I19 A;  3B9J B;  3FWA A;  5FXP A;  4HG0 A;  1N5W C;  3SR6 B;  1HSK A;  1FFU C;  5FXD A;  5AE2 A;  3W8W A;  4PVH A;  2W55 A;  2BVH A;  3NVV B;  4PVK A;  1W1J A;  1T3Q C;  2VFU A;  3S1F A;  1N5X A;  3FW9 A;  2W3S A;  2Q4W A;  4PYT A;  1W1O A;  3TX1 A;  4PVE A;  5HQX A;  1JRP A;  3I99 A;  2QPM A;  1JRO A;  1E8F A;  2W54 A;  3FW7 A;  4PZF A;  1E8G A;  2I0K A;  3NVY B;  2GQU A;  4JB1 A;  4PVJ A;  1DII A;  1WYG A;  1W1K A;  2EXR A;  3EUB 3;  3JS8 A;  1VDV A;  2VAO A;  2VFV A;  1W1Q A;  2VFS A;  2OAI A;  1RM6 B;  5D79 A;  1W1R A;  2VFT A;  3NVW B;  3DQ0 A;  1DIQ A;  2R8D A;  4BC9 A; 
#chains in the Genus database with same CATH topology
 5AWV A;  4ZOH B;  2RK5 A;  1FFV C;  3PM9 A;  3S1D A;  4OAL A;  1WVF A;  1AHU A;  1QLT A;  4XLO A;  1N61 C;  2VFR A;  5AE1 A;  3RJA A;  2PLS A;  3NS1 B;  4ML8 A;  3LAE A;  1WVE A;  1N63 C;  3PQB A;  5I1V A;  1E8H A;  3C0P A;  5ADZ A;  1FO4 A;  1N60 C;  1QLU A;  1UXY A;  3GSY A;  3AM9 A;  2WDW A;  4MLA A;  1ZR6 A;  2P3H A;  1W1L A;  5FXE A;  4BBY A;  1VAO A;  1AHZ A;  3HRD C;  3EJB B;  3TSJ A;  3VTE A;  2P4P A;  2NQW A;  3DED A;  2GQT A;  3D2D A;  3W8Z A;  4O95 A;  3S1C A;  1MBB A;  3AMZ A;  2O3G A;  2Y08 A;  2QKN A;  3NVZ B;  2YVS A;  3S1E A;  2R2Z A;  1W1S A;  1W1M A;  3D2J A;  2PLI A;  1DZN A;  2Y3S A;  4UD8 A;  3TSH A;  1SB3 B;  2UUU A;  5FXF A;  3LLB A;  2BVF A;  4DNS A;  4BCA A;  5K8E A;  1MBT A;  2BVG A;  1E0Y A;  5G5G B;  2E3T A;  1AHV A;  1N62 C;  3BW7 A;  4BC7 A;  4EC3 A;  3FW8 A;  1V97 A;  2MBR A;  5G5H B;  4PWC A;  1F0X A;  2W3R A;  2UUV A;  3KJM A;  3NRZ B;  4JAY A;  5AE3 A;  2Y3R A;  2P13 A;  3D2H A;  1FIQ B;  5HMR A;  4PWB A;  3ETR B;  2Q85 A;  1ZXI C;  3W8X A;  3AN1 A;  2AXR A;  5HHZ A;  1I19 A;  3B9J B;  3FWA A;  5FXP A;  4HG0 A;  1N5W C;  2IPI A;  5I1W A;  3SR6 B;  1HSK A;  3EJE B;  1FFU C;  5FXD A;  5AE2 A;  3W8W A;  4PVH A;  2W55 A;  3HSU A;  2BVH A;  3NVV B;  4PVK A;  1W1J A;  1T3Q C;  2VFU A;  3S1F A;  1N5X A;  3FW9 A;  2W3S A;  2Q4W A;  4PYT A;  1W1O A;  3TX1 A;  4PVE A;  5HQX A;  1JRP A;  2Y4G A;  5L6F A;  3I99 A;  2QPM A;  1JRO A;  1E8F A;  3POP A;  2W54 A;  3FW7 A;  4PZF A;  1E8G A;  2I0K A;  3NVY B;  3EJD B;  2GQU A;  5L6G A;  4JB1 A;  4PVJ A;  1DII A;  1WYG A;  1W1K A;  2EXR A;  3EUB 3;  3JS8 A;  1VDV A;  2VAO A;  2VFV A;  1W1Q A;  2VFS A;  2OAI A;  3RJ8 A;  1RM6 B;  5D79 A;  1W1R A;  2VFT A;  3NVW B;  3DQ0 A;  1DIQ A;  2R8D A;  4BC9 A; 
#chains in the Genus database with same CATH homology
 5AWV A;  4ZOH B;  2RK5 A;  1FFV C;  3PM9 A;  3S1D A;  4OAL A;  1WVF A;  1AHU A;  1QLT A;  4XLO A;  1N61 C;  2VFR A;  5AE1 A;  3RJA A;  2PLS A;  3NS1 B;  4ML8 A;  3LAE A;  1WVE A;  1N63 C;  3PQB A;  5I1V A;  1E8H A;  3C0P A;  5ADZ A;  1FO4 A;  1N60 C;  1QLU A;  1UXY A;  3GSY A;  3AM9 A;  2WDW A;  4MLA A;  1ZR6 A;  2P3H A;  1W1L A;  5FXE A;  4BBY A;  1VAO A;  1AHZ A;  3HRD C;  3TSJ A;  3VTE A;  2P4P A;  2NQW A;  3DED A;  2GQT A;  3D2D A;  3W8Z A;  4O95 A;  3S1C A;  1MBB A;  3AMZ A;  2O3G A;  2Y08 A;  2QKN A;  3NVZ B;  2YVS A;  3S1E A;  2R2Z A;  1W1S A;  1W1M A;  3D2J A;  2PLI A;  1DZN A;  2Y3S A;  4UD8 A;  3TSH A;  1SB3 B;  2UUU A;  5FXF A;  3LLB A;  2BVF A;  4DNS A;  4BCA A;  5K8E A;  1MBT A;  2BVG A;  1E0Y A;  5G5G B;  2E3T A;  1AHV A;  1N62 C;  3BW7 A;  4BC7 A;  4EC3 A;  3FW8 A;  1V97 A;  2MBR A;  5G5H B;  4PWC A;  1F0X A;  2W3R A;  2UUV A;  3KJM A;  3NRZ B;  4JAY A;  5AE3 A;  2Y3R A;  2P13 A;  3D2H A;  1FIQ B;  5HMR A;  4PWB A;  3ETR B;  2Q85 A;  1ZXI C;  3W8X A;  3AN1 A;  2AXR A;  5HHZ A;  1I19 A;  3B9J B;  3FWA A;  5FXP A;  4HG0 A;  1N5W C;  2IPI A;  5I1W A;  3SR6 B;  1HSK A;  1FFU C;  5FXD A;  5AE2 A;  3W8W A;  4PVH A;  2W55 A;  3HSU A;  2BVH A;  3NVV B;  4PVK A;  1W1J A;  1T3Q C;  2VFU A;  3S1F A;  1N5X A;  3FW9 A;  2W3S A;  2Q4W A;  4PYT A;  1W1O A;  3TX1 A;  4PVE A;  5HQX A;  1JRP A;  2Y4G A;  5L6F A;  3I99 A;  2QPM A;  1JRO A;  1E8F A;  3POP A;  2W54 A;  3FW7 A;  4PZF A;  1E8G A;  2I0K A;  3NVY B;  2GQU A;  5L6G A;  4JB1 A;  4PVJ A;  1DII A;  1WYG A;  1W1K A;  2EXR A;  3EUB 3;  3JS8 A;  1VDV A;  2VAO A;  2VFV A;  1W1Q A;  2VFS A;  2OAI A;  3RJ8 A;  1RM6 B;  5D79 A;  1W1R A;  2VFT A;  3NVW B;  3DQ0 A;  1DIQ A;  2R8D A;  4BC9 A; 
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