1BJ5A

Human serum albumin complexed with myristic acid
Total Genus 216
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
216
sequence length
582
structure length
582
Chain Sequence
HKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords HUMAN SERUM ALBUMIN
publication title Crystal structure of human serum albumin complexed with fatty acid reveals an asymmetric distribution of binding sites.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Plasma protein
total genus 216
structure length 582
sequence length 582
ec nomenclature
pdb deposition date 1998-07-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1bj5A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1bj5A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1bj5A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1bj5A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1bj5A06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1bj5A05
1LOTA 1BM0A 5DQFA 4OT2A 5IJEA 4BKEA 2I30A 5GHKA 4HGKA 3SQJA 1MA9A 3A73A 1J7EA 1BJ5A 5DBYA 1UORA 1BKEA 4K71A 3V03A 4F5SA 4LUHA 4G04A 4LUFA 4ZBQA 2XVWA 5IIUA 4LA0A 1HK3A 2BXAA 5ID7A 1E7IA 2BXDA 5HOZA 3UIVA 3LU8A 3B9MA 3JQZA 3CX9A 2XW1A 4L9QA 1H9ZA 4N0UD 1E7HA 3LU6A 1N5UA 2XVQA 2BXCA 2YDFA 2I2ZA 5ID9A 2BXHA 4S1YA 5FUOA 5IJFA 1TF0A 2XVVA 4IW1A 2BXLA 4L9KA 2VDBA 4ZBRA 1KXPD 4F5UA 1HK1A 2VUFA 2BXNA 4L8UA 1HA2A 2BXPA 4OR0A 4PO0A 4K2CA 2BXMA 2BXKA 1E7EA 3TDLA 3V08A 2BXIA 4E99A 1E7CA 1E7FA 1HK4A 4JK4A 1E7AA 1O9XA 4EMXA 5IFOA 3B9LA 1E7GA 4N0FD 4HGMB 4F5VA 4J2VA 5IIHA 1HK5A 1J78A 2BXFA 2XSIA 5IJ5A 4IW2A 2BXOA 4F5TA 3JRYA 2BX8A 5IIXA 2BXBA 1GNIA 2XVUA 1E7BA 3V09A 4LB9A 2XW0A 4G03A 2BXQA 1AO6A 1E78A 2BXGA 2VUEA 1HK2A 4LB2A 1KW2A 3LU7A 4Z69A 1GNJA 2BXEA
chains in the Genus database with same CATH superfamily
1LOTA 4MBEC 1BM0A 4C31B 5DQFA 4OT2A 5IJEA 4BKEA 2I30A 5GHKA 4HGKA 3SQJA 1VZSA 1MA9A 3A73A 1J7EA 2EFDA 1BJ5A 5DBYA 3WHSA 2E0XA 2Z8KA 3BPJA 1UORA 1BKEA 2ROHA 4M70B 4K71A 3V03A 2Z8IA 4F5SA 2AGHB 4Z69A 4LUHA 5GIPA 1NT2B 2EFEA 1LNSA 4G04A 4LUFA 4ZBQA 2XVWA 5IIUA 4LA0A 1VFIA 1HK3A 2BXAA 5ID7A 2V36A 1E7IA 2BXDA 3W1SA 3ECPA 5HOZA 3UIVA 2DBWA 3LU8A 2QMCA 3FNMA 3B9MA 3JQZA 3MHSB 3SIUB 3CX9A 2XW1A 4OTUA 4L9QA 1H9ZA 4GG2A 1MUSA 2OZBB 2EFCA 4ZUXV 3MHHB 4N0UD 2EFHA 1E7HA 3WHRA 3NVIA 3LU6A 1N5UA 2XVQA 2BXCA 2YDFA 2I2ZA 4W4UB 2LXSA 5ID9A 5BPKA 3KJLA 3H37A 2BXHA 3GA9L 4OTTA 4S1YA 4ZC6A 3WHQA 5FUOA 2DG5A 2DYOA 5IJFA 1TF0A 2XVVA 3GQXA 4IW1A 2BXLA 4L9KA 2VDBA 4FJCB 4TQ1A 3FWCC 2OT3A 4ZBRA 1KXPD 3NVKA 3KIKA 1IJGA 1HK1A 4F5UA 4D7XA 4GDXA 2VUFA 2BXNA 3H3AA 1MUHA 4L8UA 3NVMA 2LQIA 3G9KD 1HA2A 2BXPA 2Z8JA 3GQUA 4OR0A 3VQIA 4GDKB 2CKXA 2LQHA 2JUHA 4PO0A 2QM6A 4K2CA 2BXMA 2BXKA 1E7EA 3TDLA 3V08A 4BY9C 1MIYA 2DBUA 2NQOA 2BXIA 4E99A 1JNBA 1TXUA 1SB0A 1E7CA 1E7FA 1HK4A 4JK4A 5GINA 4ZBKA 1E7AA 3FWBC 1O9XA 2LXTA 4EMXA 5IFOA 1KDXA 3SIVB 1MIVA 3B9LA 2DBXA 1E7GA 4N0FD 4HGMB 2KBZA 2KWFA 4F5VA 4J2VA 5IIHA 1HK5A 3PLAA 5GIOA 2GUTA 4ZCGA 1J78A 2BXFA 2XSIA 2XMOA 5IJ5A 4IW2A 4NAWB 2BXOA 5D7GA 3A75A 4F5TA 1H5WA 3JRYA 3M99C 2BX8A 4DM0A 4GDLB 1MIWA 2DYMA 5IIXA 1FOUA 2BXBA 1GNIA 2E0YA 2NNWA 2XVUA 1E7BA 3V09A 4LB9A 2XW0A 4DHXB 4Z9OA 4G03A 2BXQA 1AO6A 4N3ZA 2K0NA 4FK5B 1E78A 2BXGA 2VUEA 4FIPB 4WA6B 5B5TA 2QHBA 1MM8A 3NMUA 4I9OA 1HK2A 3ICXA 4LB2A 1KW2A 2LOQA 3LU7A 2AJEA 4TQ0A 1GNJA 4G01A 2BXEA
chains in the Genus database with same CATH topology
1LOTA 4MBEC 1BM0A 4C31B 5DQFA 4OT2A 5IJEA 4BKEA 2I30A 5GHKA 4HGKA 3SQJA 1VZSA 1MA9A 3A73A 1J7EA 2EFDA 1BJ5A 5DBYA 3WHSA 2E0XA 2Z8KA 1UORA 1BKEA 2ROHA 4M70B 4K71A 3V03A 2Z8IA 4F5SA 4Z69A 5GIPA 4LUHA 1NT2B 2EFEA 1LNSA 4G04A 4LUFA 4ZBQA 2XVWA 5IIUA 4LA0A 1VFIA 1HK3A 2BXAA 5ID7A 2V36A 1E7IA 2BXDA 3W1SA 5HOZA 3UIVA 2DBWA 3LU8A 2QMCA 3FNMA 3B9MA 3JQZA 3MHSB 3SIUB 3CX9A 2XW1A 4OTUA 4L9QA 1H9ZA 4GG2A 2OZBB 2EFCA 4ZUXV 3MHHB 4N0UD 2EFHA 1E7HA 3WHRA 3NVIA 3LU6A 1N5UA 2XVQA 2BXCA 2YDFA 2I2ZA 4W4UB 5ID9A 5BPKA 3KJLA 3H37A 2BXHA 3GA9L 4OTTA 4S1YA 4ZC6A 3WHQA 5FUOA 2DG5A 2DYOA 5IJFA 1TF0A 2XVVA 3GQXA 4IW1A 2BXLA 4L9KA 2VDBA 4FJCB 4TQ1A 3FWCC 2OT3A 4ZBRA 1KXPD 3NVKA 3KIKA 1IJGA 1HK1A 4F5UA 4GDXA 2VUFA 2BXNA 3H3AA 4L8UA 3NVMA 3G9KD 1HA2A 2BXPA 2Z8JA 3GQUA 4OR0A 3VQIA 4GDKB 2CKXA 2JUHA 4PO0A 2QM6A 4K2CA 2BXMA 2BXKA 1E7EA 3TDLA 3V08A 4BY9C 1MIYA 2DBUA 2NQOA 2BXIA 4E99A 1JNBA 1TXUA 1E7CA 1E7FA 1HK4A 4JK4A 5GINA 4ZBKA 1E7AA 3FWBC 1O9XA 4EMXA 5IFOA 3SIVB 1MIVA 3B9LA 2DBXA 1E7GA 4N0FD 4HGMB 2KBZA 4F5VA 4J2VA 5IIHA 1HK5A 3PLAA 5GIOA 4ZCGA 1J78A 2BXFA 2XSIA 2XMOA 5IJ5A 4IW2A 4NAWB 2BXOA 5D7GA 3A75A 4F5TA 1H5WA 3JRYA 3M99C 2BX8A 4GDLB 1MIWA 2DYMA 5IIXA 1FOUA 2BXBA 1GNIA 2E0YA 2NNWA 2XVUA 1E7BA 3V09A 4LB9A 2XW0A 4DHXB 4Z9OA 4G03A 2BXQA 1AO6A 4N3ZA 4FK5B 1E78A 2BXGA 2VUEA 4FIPB 4WA6B 5B5TA 2QHBA 3NMUA 1HK2A 3ICXA 4LB2A 1KW2A 2LOQA 3LU7A 2AJEA 4TQ0A 1GNJA 4G01A 2BXEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1LOT A;  1BM0 A;  5DQF A;  4OT2 A;  5IJE A;  4BKE A;  2I30 A;  5GHK A;  4HGK A;  3SQJ A;  1MA9 A;  3A73 A;  1J7E A;  1BJ5 A;  5DBY A;  1UOR A;  1BKE A;  4K71 A;  3V03 A;  4F5S A;  4LUH A;  4G04 A;  4LUF A;  4ZBQ A;  2XVW A;  5IIU A;  4LA0 A;  1HK3 A;  2BXA A;  5ID7 A;  1E7I A;  2BXD A;  5HOZ A;  3UIV A;  3LU8 A;  3B9M A;  3JQZ A;  3CX9 A;  2XW1 A;  4L9Q A;  1H9Z A;  4N0U D;  1E7H A;  3LU6 A;  1N5U A;  2XVQ A;  2BXC A;  2YDF A;  2I2Z A;  5ID9 A;  2BXH A;  4S1Y A;  5FUO A;  5IJF A;  1TF0 A;  2XVV A;  4IW1 A;  2BXL A;  4L9K A;  2VDB A;  4ZBR A;  1KXP D;  4F5U A;  1HK1 A;  2VUF A;  2BXN A;  4L8U A;  1HA2 A;  2BXP A;  4OR0 A;  4PO0 A;  4K2C A;  2BXM A;  2BXK A;  1E7E A;  3TDL A;  3V08 A;  2BXI A;  4E99 A;  1E7C A;  1E7F A;  1HK4 A;  4JK4 A;  1E7A A;  1O9X A;  4EMX A;  5IFO A;  3B9L A;  1E7G A;  4N0F D;  4HGM B;  4F5V A;  4J2V A;  5IIH A;  1HK5 A;  1J78 A;  2BXF A;  2XSI A;  5IJ5 A;  4IW2 A;  2BXO A;  4F5T A;  3JRY A;  2BX8 A;  5IIX A;  2BXB A;  1GNI A;  2XVU A;  1E7B A;  3V09 A;  4LB9 A;  2XW0 A;  4G03 A;  2BXQ A;  1AO6 A;  1E78 A;  2BXG A;  2VUE A;  1HK2 A;  4LB2 A;  1KW2 A;  3LU7 A;  4Z69 A;  1GNJ A;  2BXE A; 
#chains in the Genus database with same CATH topology
 1LOT A;  4MBE C;  1BM0 A;  4C31 B;  5DQF A;  4OT2 A;  5IJE A;  4BKE A;  2I30 A;  5GHK A;  4HGK A;  3SQJ A;  1VZS A;  1MA9 A;  3A73 A;  1J7E A;  2EFD A;  1BJ5 A;  5DBY A;  3WHS A;  2E0X A;  2Z8K A;  3BPJ A;  1UOR A;  1BKE A;  2ROH A;  4M70 B;  4K71 A;  3V03 A;  2Z8I A;  4F5S A;  2AGH B;  4Z69 A;  4LUH A;  5GIP A;  1NT2 B;  2EFE A;  1LNS A;  4G04 A;  4LUF A;  4ZBQ A;  2XVW A;  5IIU A;  4LA0 A;  1VFI A;  1HK3 A;  2BXA A;  5ID7 A;  2V36 A;  1E7I A;  2BXD A;  3W1S A;  3ECP A;  5HOZ A;  3UIV A;  2DBW A;  3LU8 A;  2QMC A;  3FNM A;  3B9M A;  3JQZ A;  3MHS B;  3SIU B;  3CX9 A;  2XW1 A;  4OTU A;  4L9Q A;  1H9Z A;  4GG2 A;  1MUS A;  2OZB B;  2EFC A;  4ZUX V;  3MHH B;  4N0U D;  2EFH A;  1E7H A;  3WHR A;  3NVI A;  3LU6 A;  1N5U A;  2XVQ A;  2BXC A;  2YDF A;  2I2Z A;  4W4U B;  2LXS A;  5ID9 A;  5BPK A;  3KJL A;  3H37 A;  2BXH A;  3GA9 L;  4OTT A;  4S1Y A;  4ZC6 A;  3WHQ A;  5FUO A;  2DG5 A;  2DYO A;  5IJF A;  1TF0 A;  2XVV A;  3GQX A;  4IW1 A;  2BXL A;  4L9K A;  2VDB A;  4FJC B;  4TQ1 A;  3FWC C;  2OT3 A;  4ZBR A;  1KXP D;  3NVK A;  3KIK A;  1IJG A;  1HK1 A;  4F5U A;  4D7X A;  4GDX A;  2VUF A;  2BXN A;  3H3A A;  1MUH A;  4L8U A;  3NVM A;  2LQI A;  3G9K D;  1HA2 A;  2BXP A;  2Z8J A;  3GQU A;  4OR0 A;  3VQI A;  4GDK B;  2CKX A;  2LQH A;  2JUH A;  4PO0 A;  2QM6 A;  4K2C A;  2BXM A;  2BXK A;  1E7E A;  3TDL A;  3V08 A;  4BY9 C;  1MIY A;  2DBU A;  2NQO A;  2BXI A;  4E99 A;  1JNB A;  1TXU A;  1SB0 A;  1E7C A;  1E7F A;  1HK4 A;  4JK4 A;  5GIN A;  4ZBK A;  1E7A A;  3FWB C;  1O9X A;  2LXT A;  4EMX A;  5IFO A;  1KDX A;  3SIV B;  1MIV A;  3B9L A;  2DBX A;  1E7G A;  4N0F D;  4HGM B;  2KBZ A;  2KWF A;  4F5V A;  4J2V A;  5IIH A;  1HK5 A;  3PLA A;  5GIO A;  2GUT A;  4ZCG A;  1J78 A;  2BXF A;  2XSI A;  2XMO A;  5IJ5 A;  4IW2 A;  4NAW B;  2BXO A;  5D7G A;  3A75 A;  4F5T A;  1H5W A;  3JRY A;  3M99 C;  2BX8 A;  4DM0 A;  4GDL B;  1MIW A;  2DYM A;  5IIX A;  1FOU A;  2BXB A;  1GNI A;  2E0Y A;  2NNW A;  2XVU A;  1E7B A;  3V09 A;  4LB9 A;  2XW0 A;  4DHX B;  4Z9O A;  4G03 A;  2BXQ A;  1AO6 A;  4N3Z A;  2K0N A;  4FK5 B;  1E78 A;  2BXG A;  2VUE A;  4FIP B;  4WA6 B;  5B5T A;  2QHB A;  1MM8 A;  3NMU A;  4I9O A;  1HK2 A;  3ICX A;  4LB2 A;  1KW2 A;  2LOQ A;  3LU7 A;  2AJE A;  4TQ0 A;  1GNJ A;  4G01 A;  2BXE A; 
#chains in the Genus database with same CATH homology
 1LOT A;  4MBE C;  1BM0 A;  4C31 B;  5DQF A;  4OT2 A;  5IJE A;  4BKE A;  2I30 A;  5GHK A;  4HGK A;  3SQJ A;  1VZS A;  1MA9 A;  3A73 A;  1J7E A;  2EFD A;  1BJ5 A;  5DBY A;  3WHS A;  2E0X A;  2Z8K A;  1UOR A;  1BKE A;  2ROH A;  4M70 B;  4K71 A;  3V03 A;  2Z8I A;  4F5S A;  4Z69 A;  5GIP A;  4LUH A;  1NT2 B;  2EFE A;  1LNS A;  4G04 A;  4LUF A;  4ZBQ A;  2XVW A;  5IIU A;  4LA0 A;  1VFI A;  1HK3 A;  2BXA A;  5ID7 A;  2V36 A;  1E7I A;  2BXD A;  3W1S A;  5HOZ A;  3UIV A;  2DBW A;  3LU8 A;  2QMC A;  3FNM A;  3B9M A;  3JQZ A;  3MHS B;  3SIU B;  3CX9 A;  2XW1 A;  4OTU A;  4L9Q A;  1H9Z A;  4GG2 A;  2OZB B;  2EFC A;  4ZUX V;  3MHH B;  4N0U D;  2EFH A;  1E7H A;  3WHR A;  3NVI A;  3LU6 A;  1N5U A;  2XVQ A;  2BXC A;  2YDF A;  2I2Z A;  4W4U B;  5ID9 A;  5BPK A;  3KJL A;  3H37 A;  2BXH A;  3GA9 L;  4OTT A;  4S1Y A;  4ZC6 A;  3WHQ A;  5FUO A;  2DG5 A;  2DYO A;  5IJF A;  1TF0 A;  2XVV A;  3GQX A;  4IW1 A;  2BXL A;  4L9K A;  2VDB A;  4FJC B;  4TQ1 A;  3FWC C;  2OT3 A;  4ZBR A;  1KXP D;  3NVK A;  3KIK A;  1IJG A;  1HK1 A;  4F5U A;  4GDX A;  2VUF A;  2BXN A;  3H3A A;  4L8U A;  3NVM A;  3G9K D;  1HA2 A;  2BXP A;  2Z8J A;  3GQU A;  4OR0 A;  3VQI A;  4GDK B;  2CKX A;  2JUH A;  4PO0 A;  2QM6 A;  4K2C A;  2BXM A;  2BXK A;  1E7E A;  3TDL A;  3V08 A;  4BY9 C;  1MIY A;  2DBU A;  2NQO A;  2BXI A;  4E99 A;  1JNB A;  1TXU A;  1E7C A;  1E7F A;  1HK4 A;  4JK4 A;  5GIN A;  4ZBK A;  1E7A A;  3FWB C;  1O9X A;  4EMX A;  5IFO A;  3SIV B;  1MIV A;  3B9L A;  2DBX A;  1E7G A;  4N0F D;  4HGM B;  2KBZ A;  4F5V A;  4J2V A;  5IIH A;  1HK5 A;  3PLA A;  5GIO A;  4ZCG A;  1J78 A;  2BXF A;  2XSI A;  2XMO A;  5IJ5 A;  4IW2 A;  4NAW B;  2BXO A;  5D7G A;  3A75 A;  4F5T A;  1H5W A;  3JRY A;  3M99 C;  2BX8 A;  4GDL B;  1MIW A;  2DYM A;  5IIX A;  1FOU A;  2BXB A;  1GNI A;  2E0Y A;  2NNW A;  2XVU A;  1E7B A;  3V09 A;  4LB9 A;  2XW0 A;  4DHX B;  4Z9O A;  4G03 A;  2BXQ A;  1AO6 A;  4N3Z A;  4FK5 B;  1E78 A;  2BXG A;  2VUE A;  4FIP B;  4WA6 B;  5B5T A;  2QHB A;  3NMU A;  1HK2 A;  3ICX A;  4LB2 A;  1KW2 A;  2LOQ A;  3LU7 A;  2AJE A;  4TQ0 A;  1GNJ A;  4G01 A;  2BXE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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