5ID7A

Crystal structure of human serum albumin in complex with phosphorodithioate derivative of myristoyl cyclic phosphatidic acid (cpa)
Total Genus 233
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
233
sequence length
582
structure length
582
Chain Sequence
HKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Serum albumin
publication title Structural evidence of the species-dependent albumin binding of the modified cyclic phosphatidic acid with cytotoxic properties.
pubmed doi rcsb
molecule tags Transport protein
total genus 233
structure length 582
sequence length 582
chains with identical sequence B
ec nomenclature
pdb deposition date 2016-02-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5id7A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5id7A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5id7A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5id7A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5id7A06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5id7A05
4OR0A 2I30A 3A73A 2BX8A 2BXIA 3V03A 4IW2A 1HA2A 3JRYA 5HOZA 4E99A 4LUHA 4ZBQA 5IJEA 5IIXA 4F5TA 4F5VA 1E7AA 4HGMB 2BXQA 2XVQA 1H9ZA 3B9LA 4HGKA 4BKEA 5GHKA 4G03A 4F5UA 2VUEA 4OT2A 1KXPD 4Z69A 1GNIA 5ID7A 1HK3A 3SQJA 4N0UD 5DQFA 2BXMA 1GNJA 2I2ZA 4LUFA 3V08A 1MA9A 1BM0A 3LU6A 4K71A 1E7GA 2BXAA 4LB9A 1O9XA 4JK4A 2BXGA 2BXLA 3LU7A 3V09A 1E7EA 2YDFA 2BXCA 1E78A 2BXFA 2BXOA 1LOTA 5IIHA 5DBYA 1TF0A 4N0FD 1HK4A 5IJ5A 2BXNA 4J2VA 1E7HA 1J7EA 4L8UA 3LU8A 2VUFA 2BXBA 3UIVA 5IFOA 2BXDA 4ZBRA 2BXPA 4LA0A 1E7BA 5IJFA 1N5UA 3JQZA 4PO0A 2XVUA 2XW0A 4K2CA 4IW1A 1HK2A 1HK5A 4L9KA 5FUOA 2XW1A 1BJ5A 2BXHA 4F5SA 3TDLA 2XVVA 1HK1A 1E7IA 2XSIA 2XVWA 4LB2A 1E7CA 4G04A 3B9MA 2BXEA 1KW2A 5IIUA 1AO6A 4S1YA 1J78A 5ID9A 4EMXA 1BKEA 1UORA 2BXKA 2VDBA 3CX9A 4L9QA 1E7FA
chains in the Genus database with same CATH superfamily
4OR0A 2OZBB 3NMUA 2I30A 2QHBA 3A73A 2BX8A 4MBEC 2BXIA 3V03A 4IW2A 1LNSA 1HA2A 3FWCC 3JRYA 4FK5B 5HOZA 2CKXA 1MUSA 4E99A 4LUHA 4ZBQA 5IJEA 5IIXA 1NT2B 4F5TA 2JUHA 4F5VA 4GG2A 1E7AA 4HGMB 2BXQA 4TQ0A 2XVQA 1H9ZA 3B9LA 4HGKA 1JNBA 4BKEA 3SIUB 5GHKA 4G03A 3KJLA 4F5UA 3GQXA 2KBZA 2VUEA 4OT2A 1KXPD 2KWFA 3G9KD 4FJCB 4ZUXV 3WHRA 3MHSB 1MIYA 4Z69A 2QMCA 3GA9L 2K0NA 1KDXA 1VZSA 2Z8JA 1GNIA 4DHXB 5ID7A 5GIOA 1HK3A 4OTTA 2NNWA 5B5TA 3GQUA 3SQJA 4N0UD 2XMOA 3SIVB 5DQFA 4ZBKA 2BXMA 1GNJA 2I2ZA 4LUFA 2LXTA 3V08A 3PLAA 1MA9A 4GDXA 1VFIA 4DM0A 1BM0A 3LU6A 1MUHA 4K71A 3BPJA 4N3ZA 2DYMA 1E7GA 2EFCA 2BXAA 2DBUA 2LXSA 1O9XA 2LOQA 4GDLB 4JK4A 4LB9A 3NVIA 2BXGA 2BXLA 3LU7A 3ICXA 3V09A 2NQOA 1E7EA 2YDFA 2BXCA 3H37A 1E78A 4WA6B 4D7XA 2BXFA 4BY9C 1TXUA 1LOTA 2BXOA 2LQIA 4ZC6A 2E0YA 4GDKB 5DBYA 1TF0A 5IIHA 3WHSA 4N0FD 1HK4A 4G01A 5IJ5A 3VQIA 2LQHA 4FIPB 2BXNA 4ZCGA 4J2VA 4TQ1A 1E7HA 1J7EA 4L8UA 4OTUA 3LU8A 1MIVA 2VUFA 1MIWA 2BXBA 2AGHB 3UIVA 1H5WA 2BXDA 4ZBRA 2BXPA 2EFHA 4I9OA 4M70B 4W4UB 2EFEA 4LA0A 3FNMA 5IFOA 1E7BA 2Z8IA 2V36A 5IJFA 1N5UA 4Z9OA 4C31B 3JQZA 4PO0A 2XVUA 2DG5A 2XW0A 4K2CA 4IW1A 1HK2A 1HK5A 4L9KA 2E0XA 5FUOA 3ECPA 5D7GA 2DYOA 1FOUA 3MHHB 3FWBC 5BPKA 2XW1A 1BJ5A 2BXHA 2ROHA 3H3AA 3M99C 5GIPA 3WHQA 3NVKA 2AJEA 4F5SA 1SB0A 2DBWA 2XVVA 3TDLA 1HK1A 1E7IA 1IJGA 2EFDA 2XSIA 4NAWB 2XVWA 3W1SA 4LB2A 1E7CA 4G04A 3B9MA 2BXEA 1KW2A 3A75A 3NVMA 5GINA 5IIUA 2QM6A 3KIKA 4S1YA 1AO6A 1J78A 2Z8KA 1MM8A 5ID9A 4EMXA 1BKEA 1UORA 2BXKA 2OT3A 2VDBA 3CX9A 4L9QA 2DBXA 1E7FA 2GUTA
chains in the Genus database with same CATH topology
4OR0A 2OZBB 3NMUA 2I30A 2QHBA 3A73A 2BX8A 4MBEC 2BXIA 3V03A 4IW2A 1LNSA 1HA2A 3FWCC 3JRYA 4FK5B 5HOZA 2CKXA 4E99A 4LUHA 4ZBQA 5IJEA 5IIXA 1NT2B 4F5TA 2JUHA 4F5VA 4GG2A 1E7AA 4HGMB 2BXQA 4TQ0A 2XVQA 1H9ZA 3B9LA 4HGKA 1JNBA 4BKEA 3SIUB 5GHKA 4G03A 3KJLA 4F5UA 3GQXA 2KBZA 2VUEA 4OT2A 1KXPD 3G9KD 4FJCB 4ZUXV 3WHRA 3MHSB 1MIYA 4Z69A 2QMCA 3GA9L 1VZSA 2Z8JA 1GNIA 4DHXB 5ID7A 5GIOA 1HK3A 4OTTA 2NNWA 5B5TA 3GQUA 3SQJA 4N0UD 2XMOA 3SIVB 5DQFA 4ZBKA 2BXMA 1GNJA 2I2ZA 4LUFA 3V08A 3PLAA 1MA9A 4GDXA 1VFIA 1BM0A 3LU6A 4K71A 4N3ZA 2DYMA 1E7GA 2EFCA 2BXAA 2DBUA 4GDLB 1O9XA 2LOQA 4JK4A 4LB9A 2BXGA 2BXLA 3LU7A 3ICXA 3V09A 2NQOA 1E7EA 2YDFA 2BXCA 3H37A 1E78A 4WA6B 2BXFA 4BY9C 1TXUA 1LOTA 2BXOA 4ZC6A 5IIHA 2E0YA 4GDKB 5DBYA 1TF0A 3NVIA 3WHSA 4N0FD 1HK4A 4G01A 5IJ5A 3VQIA 4FIPB 2BXNA 4ZCGA 4J2VA 4TQ1A 1E7HA 1J7EA 4L8UA 4OTUA 3LU8A 1MIVA 2VUFA 1MIWA 2BXBA 3UIVA 1H5WA 2BXDA 4ZBRA 2BXPA 2EFHA 5IFOA 4M70B 4W4UB 2EFEA 4LA0A 3FNMA 1E7BA 2Z8IA 2V36A 5IJFA 1N5UA 4Z9OA 4C31B 3JQZA 4PO0A 2XVUA 2DG5A 2XW0A 4K2CA 4IW1A 1HK2A 1HK5A 4L9KA 2E0XA 5FUOA 5D7GA 2DYOA 1FOUA 3MHHB 3FWBC 5BPKA 2XW1A 1BJ5A 2BXHA 2ROHA 3H3AA 3M99C 5GIPA 3WHQA 3NVKA 2AJEA 4F5SA 2DBWA 3TDLA 2XVVA 1HK1A 1E7IA 1IJGA 2EFDA 2XSIA 4NAWB 2XVWA 3W1SA 4LB2A 1E7CA 4G04A 3B9MA 2BXEA 1KW2A 3A75A 3NVMA 5GINA 5IIUA 2QM6A 3KIKA 4S1YA 1AO6A 1J78A 2Z8KA 5ID9A 4EMXA 1BKEA 1UORA 2BXKA 2OT3A 2VDBA 3CX9A 4L9QA 2DBXA 1E7FA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4OR0 A;  2I30 A;  3A73 A;  2BX8 A;  2BXI A;  3V03 A;  4IW2 A;  1HA2 A;  3JRY A;  5HOZ A;  4E99 A;  4LUH A;  4ZBQ A;  5IJE A;  5IIX A;  4F5T A;  4F5V A;  1E7A A;  4HGM B;  2BXQ A;  2XVQ A;  1H9Z A;  3B9L A;  4HGK A;  4BKE A;  5GHK A;  4G03 A;  4F5U A;  2VUE A;  4OT2 A;  1KXP D;  4Z69 A;  1GNI A;  5ID7 A;  1HK3 A;  3SQJ A;  4N0U D;  5DQF A;  2BXM A;  1GNJ A;  2I2Z A;  4LUF A;  3V08 A;  1MA9 A;  1BM0 A;  3LU6 A;  4K71 A;  1E7G A;  2BXA A;  4LB9 A;  1O9X A;  4JK4 A;  2BXG A;  2BXL A;  3LU7 A;  3V09 A;  1E7E A;  2YDF A;  2BXC A;  1E78 A;  2BXF A;  2BXO A;  1LOT A;  5IIH A;  5DBY A;  1TF0 A;  4N0F D;  1HK4 A;  5IJ5 A;  2BXN A;  4J2V A;  1E7H A;  1J7E A;  4L8U A;  3LU8 A;  2VUF A;  2BXB A;  3UIV A;  5IFO A;  2BXD A;  4ZBR A;  2BXP A;  4LA0 A;  1E7B A;  5IJF A;  1N5U A;  3JQZ A;  4PO0 A;  2XVU A;  2XW0 A;  4K2C A;  4IW1 A;  1HK2 A;  1HK5 A;  4L9K A;  5FUO A;  2XW1 A;  1BJ5 A;  2BXH A;  4F5S A;  3TDL A;  2XVV A;  1HK1 A;  1E7I A;  2XSI A;  2XVW A;  4LB2 A;  1E7C A;  4G04 A;  3B9M A;  2BXE A;  1KW2 A;  5IIU A;  1AO6 A;  4S1Y A;  1J78 A;  5ID9 A;  4EMX A;  1BKE A;  1UOR A;  2BXK A;  2VDB A;  3CX9 A;  4L9Q A;  1E7F A; 
#chains in the Genus database with same CATH topology
 4OR0 A;  2OZB B;  3NMU A;  2I30 A;  2QHB A;  3A73 A;  2BX8 A;  4MBE C;  2BXI A;  3V03 A;  4IW2 A;  1LNS A;  1HA2 A;  3FWC C;  3JRY A;  4FK5 B;  5HOZ A;  2CKX A;  1MUS A;  4E99 A;  4LUH A;  4ZBQ A;  5IJE A;  5IIX A;  1NT2 B;  4F5T A;  2JUH A;  4F5V A;  4GG2 A;  1E7A A;  4HGM B;  2BXQ A;  4TQ0 A;  2XVQ A;  1H9Z A;  3B9L A;  4HGK A;  1JNB A;  4BKE A;  3SIU B;  5GHK A;  4G03 A;  3KJL A;  4F5U A;  3GQX A;  2KBZ A;  2VUE A;  4OT2 A;  1KXP D;  2KWF A;  3G9K D;  4FJC B;  4ZUX V;  3WHR A;  3MHS B;  1MIY A;  4Z69 A;  2QMC A;  3GA9 L;  2K0N A;  1KDX A;  1VZS A;  2Z8J A;  1GNI A;  4DHX B;  5ID7 A;  5GIO A;  1HK3 A;  4OTT A;  2NNW A;  5B5T A;  3GQU A;  3SQJ A;  4N0U D;  2XMO A;  3SIV B;  5DQF A;  4ZBK A;  2BXM A;  1GNJ A;  2I2Z A;  4LUF A;  2LXT A;  3V08 A;  3PLA A;  1MA9 A;  4GDX A;  1VFI A;  4DM0 A;  1BM0 A;  3LU6 A;  1MUH A;  4K71 A;  3BPJ A;  4N3Z A;  2DYM A;  1E7G A;  2EFC A;  2BXA A;  2DBU A;  2LXS A;  1O9X A;  2LOQ A;  4GDL B;  4JK4 A;  4LB9 A;  3NVI A;  2BXG A;  2BXL A;  3LU7 A;  3ICX A;  3V09 A;  2NQO A;  1E7E A;  2YDF A;  2BXC A;  3H37 A;  1E78 A;  4WA6 B;  4D7X A;  2BXF A;  4BY9 C;  1TXU A;  1LOT A;  2BXO A;  2LQI A;  4ZC6 A;  2E0Y A;  4GDK B;  5DBY A;  1TF0 A;  5IIH A;  3WHS A;  4N0F D;  1HK4 A;  4G01 A;  5IJ5 A;  3VQI A;  2LQH A;  4FIP B;  2BXN A;  4ZCG A;  4J2V A;  4TQ1 A;  1E7H A;  1J7E A;  4L8U A;  4OTU A;  3LU8 A;  1MIV A;  2VUF A;  1MIW A;  2BXB A;  2AGH B;  3UIV A;  1H5W A;  2BXD A;  4ZBR A;  2BXP A;  2EFH A;  4I9O A;  4M70 B;  4W4U B;  2EFE A;  4LA0 A;  3FNM A;  5IFO A;  1E7B A;  2Z8I A;  2V36 A;  5IJF A;  1N5U A;  4Z9O A;  4C31 B;  3JQZ A;  4PO0 A;  2XVU A;  2DG5 A;  2XW0 A;  4K2C A;  4IW1 A;  1HK2 A;  1HK5 A;  4L9K A;  2E0X A;  5FUO A;  3ECP A;  5D7G A;  2DYO A;  1FOU A;  3MHH B;  3FWB C;  5BPK A;  2XW1 A;  1BJ5 A;  2BXH A;  2ROH A;  3H3A A;  3M99 C;  5GIP A;  3WHQ A;  3NVK A;  2AJE A;  4F5S A;  1SB0 A;  2DBW A;  2XVV A;  3TDL A;  1HK1 A;  1E7I A;  1IJG A;  2EFD A;  2XSI A;  4NAW B;  2XVW A;  3W1S A;  4LB2 A;  1E7C A;  4G04 A;  3B9M A;  2BXE A;  1KW2 A;  3A75 A;  3NVM A;  5GIN A;  5IIU A;  2QM6 A;  3KIK A;  4S1Y A;  1AO6 A;  1J78 A;  2Z8K A;  1MM8 A;  5ID9 A;  4EMX A;  1BKE A;  1UOR A;  2BXK A;  2OT3 A;  2VDB A;  3CX9 A;  4L9Q A;  2DBX A;  1E7F A;  2GUT A; 
#chains in the Genus database with same CATH homology
 4OR0 A;  2OZB B;  3NMU A;  2I30 A;  2QHB A;  3A73 A;  2BX8 A;  4MBE C;  2BXI A;  3V03 A;  4IW2 A;  1LNS A;  1HA2 A;  3FWC C;  3JRY A;  4FK5 B;  5HOZ A;  2CKX A;  4E99 A;  4LUH A;  4ZBQ A;  5IJE A;  5IIX A;  1NT2 B;  4F5T A;  2JUH A;  4F5V A;  4GG2 A;  1E7A A;  4HGM B;  2BXQ A;  4TQ0 A;  2XVQ A;  1H9Z A;  3B9L A;  4HGK A;  1JNB A;  4BKE A;  3SIU B;  5GHK A;  4G03 A;  3KJL A;  4F5U A;  3GQX A;  2KBZ A;  2VUE A;  4OT2 A;  1KXP D;  3G9K D;  4FJC B;  4ZUX V;  3WHR A;  3MHS B;  1MIY A;  4Z69 A;  2QMC A;  3GA9 L;  1VZS A;  2Z8J A;  1GNI A;  4DHX B;  5ID7 A;  5GIO A;  1HK3 A;  4OTT A;  2NNW A;  5B5T A;  3GQU A;  3SQJ A;  4N0U D;  2XMO A;  3SIV B;  5DQF A;  4ZBK A;  2BXM A;  1GNJ A;  2I2Z A;  4LUF A;  3V08 A;  3PLA A;  1MA9 A;  4GDX A;  1VFI A;  1BM0 A;  3LU6 A;  4K71 A;  4N3Z A;  2DYM A;  1E7G A;  2EFC A;  2BXA A;  2DBU A;  4GDL B;  1O9X A;  2LOQ A;  4JK4 A;  4LB9 A;  2BXG A;  2BXL A;  3LU7 A;  3ICX A;  3V09 A;  2NQO A;  1E7E A;  2YDF A;  2BXC A;  3H37 A;  1E78 A;  4WA6 B;  2BXF A;  4BY9 C;  1TXU A;  1LOT A;  2BXO A;  4ZC6 A;  5IIH A;  2E0Y A;  4GDK B;  5DBY A;  1TF0 A;  3NVI A;  3WHS A;  4N0F D;  1HK4 A;  4G01 A;  5IJ5 A;  3VQI A;  4FIP B;  2BXN A;  4ZCG A;  4J2V A;  4TQ1 A;  1E7H A;  1J7E A;  4L8U A;  4OTU A;  3LU8 A;  1MIV A;  2VUF A;  1MIW A;  2BXB A;  3UIV A;  1H5W A;  2BXD A;  4ZBR A;  2BXP A;  2EFH A;  5IFO A;  4M70 B;  4W4U B;  2EFE A;  4LA0 A;  3FNM A;  1E7B A;  2Z8I A;  2V36 A;  5IJF A;  1N5U A;  4Z9O A;  4C31 B;  3JQZ A;  4PO0 A;  2XVU A;  2DG5 A;  2XW0 A;  4K2C A;  4IW1 A;  1HK2 A;  1HK5 A;  4L9K A;  2E0X A;  5FUO A;  5D7G A;  2DYO A;  1FOU A;  3MHH B;  3FWB C;  5BPK A;  2XW1 A;  1BJ5 A;  2BXH A;  2ROH A;  3H3A A;  3M99 C;  5GIP A;  3WHQ A;  3NVK A;  2AJE A;  4F5S A;  2DBW A;  3TDL A;  2XVV A;  1HK1 A;  1E7I A;  1IJG A;  2EFD A;  2XSI A;  4NAW B;  2XVW A;  3W1S A;  4LB2 A;  1E7C A;  4G04 A;  3B9M A;  2BXE A;  1KW2 A;  3A75 A;  3NVM A;  5GIN A;  5IIU A;  2QM6 A;  3KIK A;  4S1Y A;  1AO6 A;  1J78 A;  2Z8K A;  5ID9 A;  4EMX A;  1BKE A;  1UOR A;  2BXK A;  2OT3 A;  2VDB A;  3CX9 A;  4L9Q A;  2DBX A;  1E7F A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...