3SQJA

Recombinant human serum albumin from transgenic plant
Total Genus 230
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
230
sequence length
582
structure length
582
Chain Sequence
HKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Serum albumin
publication title Large-scale production of functional human serum albumin from transgenic rice seeds.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Transport protein
total genus 230
structure length 582
sequence length 582
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-07-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA05
2XVUA 5IIUA 1E7GA 2BXIA 2VDBA 4F5TA 2BXHA 4Z69A 3B9LA 2XVWA 1E7AA 4OT2A 2BXPA 2XVVA 4J2VA 1E7EA 2VUFA 2BXQA 4N0UD 4G03A 3LU7A 2XVQA 4L9KA 1AO6A 2BXFA 1KW2A 3JRYA 2BXEA 4ZBRA 1J78A 3LU8A 4BKEA 1BKEA 3JQZA 5IFOA 2VUEA 1E78A 3B9MA 4E99A 5IJFA 4EMXA 1HK1A 1E7BA 5GHKA 4L9QA 1HK4A 2BXOA 2BXMA 2XW1A 4ZBQA 1GNIA 5FUOA 4F5VA 5DQFA 5IIXA 4G04A 1BJ5A 3CX9A 3TDLA 4K2CA 5IIHA 1GNJA 5IJEA 2BXLA 4JK4A 2BXCA 1HK5A 2I2ZA 1BM0A 4K71A 4HGKA 1HK3A 2BXKA 2BXGA 3LU6A 4LUFA 5DBYA 1E7CA 1LOTA 1MA9A 1TF0A 5HOZA 3V08A 5ID7A 4L8UA 1H9ZA 2BXAA 3V09A 1O9XA 4PO0A 3A73A 4IW1A 1KXPD 1HA2A 2BX8A 4N0FD 4S1YA 4LA0A 3SQJA 2XSIA 3V03A 4LB9A 2BXDA 4OR0A 2YDFA 4HGMB 3UIVA 5IJ5A 1UORA 1E7IA 2I30A 5ID9A 4LB2A 2BXNA 4LUHA 2XW0A 4IW2A 1E7FA 4F5SA 2BXBA 1HK2A 1J7EA 1E7HA 4F5UA 1N5UA
chains in the Genus database with same CATH superfamily
2DBUA 2XVUA 2Z8IA 3KIKA 1MM8A 5IIUA 1E7GA 1MIWA 2BXIA 4NAWB 2VDBA 3ECPA 4F5TA 2BXHA 4Z69A 3B9LA 2EFDA 4WA6B 2XVWA 1E7AA 5GIOA 4OT2A 2BXPA 3VQIA 5GINA 2QHBA 2QM6A 2XVVA 4J2VA 4FJCB 4OTUA 4GDLB 1E7EA 2VUFA 2BXQA 4N0UD 4G03A 4TQ1A 4I9OA 4GG2A 3LU7A 2XVQA 4L9KA 3GQUA 1AO6A 2BXFA 1VFIA 4FIPB 1KW2A 3JRYA 2BXEA 3NMUA 4ZBRA 1J78A 4OTTA 3GA9L 1LNSA 3LU8A 4BKEA 1BKEA 1JNBA 4MBEC 2Z8KA 3JQZA 4M70B 1SB0A 5IFOA 2NQOA 2VUEA 3GQXA 4N3ZA 1E78A 3B9MA 3M99C 4E99A 2E0YA 2V36A 5IJFA 5D7GA 2DBXA 4EMXA 3NVIA 3BPJA 1HK1A 2DYOA 1E7BA 5GHKA 4L9QA 2LXTA 4DM0A 1HK4A 2DBWA 2KBZA 2BXOA 2LOQA 2BXMA 2XW1A 4ZBQA 1GNIA 4D7XA 3PLAA 1IJGA 2DG5A 5FUOA 4F5VA 5DQFA 3NVKA 4Z9OA 4TQ0A 5IIXA 4G04A 1BJ5A 3CX9A 3TDLA 3WHQA 1MUHA 4DHXB 4ZCGA 4K2CA 2GUTA 5IIHA 3FWBC 1GNJA 4C31B 4ZUXV 1TXUA 5IJEA 2BXLA 5B5TA 2LXSA 3FNMA 3MHHB 4JK4A 4ZC6A 2BXCA 1VZSA 2AJEA 3WHRA 2OZBB 1HK5A 3W1SA 3SIUB 2I2ZA 2KWFA 1BM0A 5GIPA 4ZBKA 4K71A 1MIYA 2LQIA 4HGKA 1HK3A 1H5WA 1MIVA 2BXKA 2BXGA 3LU6A 2NNWA 2DYMA 4LUFA 5DBYA 1E7CA 4FK5B 1LOTA 1MA9A 1TF0A 2EFCA 4G01A 5HOZA 2Z8JA 4GDXA 3V08A 3MHSB 5ID7A 4L8UA 1H9ZA 2BXAA 3V09A 1O9XA 4PO0A 3A73A 2AGHB 2JUHA 2LQHA 3H37A 2ROHA 1KXPD 3H3AA 4IW1A 1HA2A 4GDKB 2OT3A 4W4UB 2BX8A 4N0FD 1KDXA 2QMCA 4S1YA 3SIVB 4LA0A 3SQJA 2E0XA 2XSIA 3V03A 4LB9A 3G9KD 5BPKA 2BXDA 4OR0A 1NT2B 2EFHA 2YDFA 4HGMB 5IJ5A 1UORA 3UIVA 1E7IA 2I30A 2K0NA 5ID9A 2CKXA 4LB2A 2BXNA 1FOUA 4LUHA 3FWCC 1MUSA 2XW0A 4IW2A 1E7FA 2EFEA 4F5SA 2XMOA 3NVMA 2BXBA 1HK2A 3A75A 4BY9C 1J7EA 3KJLA 3WHSA 1E7HA 4F5UA 3ICXA 1N5UA
chains in the Genus database with same CATH topology
2DBUA 2XVUA 2Z8IA 3KIKA 5IIUA 1E7GA 1MIWA 2BXIA 4NAWB 2VDBA 4F5TA 2BXHA 4Z69A 3B9LA 2EFDA 4WA6B 2XVWA 1E7AA 5GIOA 4OT2A 2BXPA 3VQIA 5GINA 2QHBA 2QM6A 2XVVA 4J2VA 4FJCB 4OTUA 4GDLB 1E7EA 2VUFA 2BXQA 4N0UD 4G03A 4TQ1A 4GG2A 3LU7A 2XVQA 4L9KA 3GQUA 1AO6A 2BXFA 1VFIA 4FIPB 1KW2A 3JRYA 2BXEA 3NMUA 4ZBRA 1J78A 4OTTA 3GA9L 1LNSA 3LU8A 4BKEA 1BKEA 1JNBA 4MBEC 2Z8KA 3JQZA 4M70B 5IFOA 2NQOA 2VUEA 3GQXA 4N3ZA 1E78A 3B9MA 3M99C 4E99A 2E0YA 2V36A 5IJFA 5D7GA 2DBXA 4EMXA 3NVIA 1HK1A 2DYOA 1E7BA 5GHKA 4L9QA 1HK4A 2DBWA 2KBZA 2BXOA 2LOQA 2BXMA 2XW1A 4ZBQA 1GNIA 3PLAA 1IJGA 2DG5A 5FUOA 4F5VA 5DQFA 3NVKA 4Z9OA 4TQ0A 5IIXA 4G04A 1BJ5A 3CX9A 3TDLA 3WHQA 4DHXB 4ZCGA 4K2CA 5IIHA 3FWBC 1GNJA 4C31B 4ZUXV 1TXUA 5IJEA 2BXLA 5B5TA 3FNMA 3MHHB 4JK4A 4ZC6A 2BXCA 1VZSA 2AJEA 3WHRA 2OZBB 1HK5A 3W1SA 3SIUB 2I2ZA 1BM0A 5GIPA 4ZBKA 4K71A 1MIYA 4HGKA 1HK3A 1H5WA 1MIVA 2BXKA 2BXGA 3LU6A 2NNWA 2DYMA 4LUFA 5DBYA 1E7CA 4FK5B 1LOTA 1MA9A 1TF0A 2EFCA 4G01A 5HOZA 2Z8JA 4GDXA 3V08A 3MHSB 5ID7A 4L8UA 1H9ZA 2BXAA 3V09A 1O9XA 4PO0A 3A73A 2JUHA 3H37A 3H3AA 4IW1A 2ROHA 1KXPD 1HA2A 4GDKB 2OT3A 4W4UB 2BX8A 4N0FD 2QMCA 4S1YA 3SIVB 4LA0A 3SQJA 2E0XA 2XSIA 3V03A 4LB9A 3G9KD 5BPKA 2BXDA 4OR0A 1NT2B 2EFHA 2YDFA 4HGMB 5IJ5A 1UORA 3UIVA 1E7IA 2I30A 5ID9A 2CKXA 4LB2A 2BXNA 1FOUA 4LUHA 3FWCC 2XW0A 4IW2A 1E7FA 2EFEA 4F5SA 2XMOA 3NVMA 2BXBA 1HK2A 3A75A 4BY9C 1J7EA 3KJLA 3WHSA 1E7HA 4F5UA 3ICXA 1N5UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2XVU A;  5IIU A;  1E7G A;  2BXI A;  2VDB A;  4F5T A;  2BXH A;  4Z69 A;  3B9L A;  2XVW A;  1E7A A;  4OT2 A;  2BXP A;  2XVV A;  4J2V A;  1E7E A;  2VUF A;  2BXQ A;  4N0U D;  4G03 A;  3LU7 A;  2XVQ A;  4L9K A;  1AO6 A;  2BXF A;  1KW2 A;  3JRY A;  2BXE A;  4ZBR A;  1J78 A;  3LU8 A;  4BKE A;  1BKE A;  3JQZ A;  5IFO A;  2VUE A;  1E78 A;  3B9M A;  4E99 A;  5IJF A;  4EMX A;  1HK1 A;  1E7B A;  5GHK A;  4L9Q A;  1HK4 A;  2BXO A;  2BXM A;  2XW1 A;  4ZBQ A;  1GNI A;  5FUO A;  4F5V A;  5DQF A;  5IIX A;  4G04 A;  1BJ5 A;  3CX9 A;  3TDL A;  4K2C A;  5IIH A;  1GNJ A;  5IJE A;  2BXL A;  4JK4 A;  2BXC A;  1HK5 A;  2I2Z A;  1BM0 A;  4K71 A;  4HGK A;  1HK3 A;  2BXK A;  2BXG A;  3LU6 A;  4LUF A;  5DBY A;  1E7C A;  1LOT A;  1MA9 A;  1TF0 A;  5HOZ A;  3V08 A;  5ID7 A;  4L8U A;  1H9Z A;  2BXA A;  3V09 A;  1O9X A;  4PO0 A;  3A73 A;  4IW1 A;  1KXP D;  1HA2 A;  2BX8 A;  4N0F D;  4S1Y A;  4LA0 A;  3SQJ A;  2XSI A;  3V03 A;  4LB9 A;  2BXD A;  4OR0 A;  2YDF A;  4HGM B;  3UIV A;  5IJ5 A;  1UOR A;  1E7I A;  2I30 A;  5ID9 A;  4LB2 A;  2BXN A;  4LUH A;  2XW0 A;  4IW2 A;  1E7F A;  4F5S A;  2BXB A;  1HK2 A;  1J7E A;  1E7H A;  4F5U A;  1N5U A; 
#chains in the Genus database with same CATH topology
 2DBU A;  2XVU A;  2Z8I A;  3KIK A;  1MM8 A;  5IIU A;  1E7G A;  1MIW A;  2BXI A;  4NAW B;  2VDB A;  3ECP A;  4F5T A;  2BXH A;  4Z69 A;  3B9L A;  2EFD A;  4WA6 B;  2XVW A;  1E7A A;  5GIO A;  4OT2 A;  2BXP A;  3VQI A;  5GIN A;  2QHB A;  2QM6 A;  2XVV A;  4J2V A;  4FJC B;  4OTU A;  4GDL B;  1E7E A;  2VUF A;  2BXQ A;  4N0U D;  4G03 A;  4TQ1 A;  4I9O A;  4GG2 A;  3LU7 A;  2XVQ A;  4L9K A;  3GQU A;  1AO6 A;  2BXF A;  1VFI A;  4FIP B;  1KW2 A;  3JRY A;  2BXE A;  3NMU A;  4ZBR A;  1J78 A;  4OTT A;  3GA9 L;  1LNS A;  3LU8 A;  4BKE A;  1BKE A;  1JNB A;  4MBE C;  2Z8K A;  3JQZ A;  4M70 B;  1SB0 A;  5IFO A;  2NQO A;  2VUE A;  3GQX A;  4N3Z A;  1E78 A;  3B9M A;  3M99 C;  4E99 A;  2E0Y A;  2V36 A;  5IJF A;  5D7G A;  2DBX A;  4EMX A;  3NVI A;  3BPJ A;  1HK1 A;  2DYO A;  1E7B A;  5GHK A;  4L9Q A;  2LXT A;  4DM0 A;  1HK4 A;  2DBW A;  2KBZ A;  2BXO A;  2LOQ A;  2BXM A;  2XW1 A;  4ZBQ A;  1GNI A;  4D7X A;  3PLA A;  1IJG A;  2DG5 A;  5FUO A;  4F5V A;  5DQF A;  3NVK A;  4Z9O A;  4TQ0 A;  5IIX A;  4G04 A;  1BJ5 A;  3CX9 A;  3TDL A;  3WHQ A;  1MUH A;  4DHX B;  4ZCG A;  4K2C A;  2GUT A;  5IIH A;  3FWB C;  1GNJ A;  4C31 B;  4ZUX V;  1TXU A;  5IJE A;  2BXL A;  5B5T A;  2LXS A;  3FNM A;  3MHH B;  4JK4 A;  4ZC6 A;  2BXC A;  1VZS A;  2AJE A;  3WHR A;  2OZB B;  1HK5 A;  3W1S A;  3SIU B;  2I2Z A;  2KWF A;  1BM0 A;  5GIP A;  4ZBK A;  4K71 A;  1MIY A;  2LQI A;  4HGK A;  1HK3 A;  1H5W A;  1MIV A;  2BXK A;  2BXG A;  3LU6 A;  2NNW A;  2DYM A;  4LUF A;  5DBY A;  1E7C A;  4FK5 B;  1LOT A;  1MA9 A;  1TF0 A;  2EFC A;  4G01 A;  5HOZ A;  2Z8J A;  4GDX A;  3V08 A;  3MHS B;  5ID7 A;  4L8U A;  1H9Z A;  2BXA A;  3V09 A;  1O9X A;  4PO0 A;  3A73 A;  2AGH B;  2JUH A;  2LQH A;  3H37 A;  2ROH A;  1KXP D;  3H3A A;  4IW1 A;  1HA2 A;  4GDK B;  2OT3 A;  4W4U B;  2BX8 A;  4N0F D;  1KDX A;  2QMC A;  4S1Y A;  3SIV B;  4LA0 A;  3SQJ A;  2E0X A;  2XSI A;  3V03 A;  4LB9 A;  3G9K D;  5BPK A;  2BXD A;  4OR0 A;  1NT2 B;  2EFH A;  2YDF A;  4HGM B;  5IJ5 A;  1UOR A;  3UIV A;  1E7I A;  2I30 A;  2K0N A;  5ID9 A;  2CKX A;  4LB2 A;  2BXN A;  1FOU A;  4LUH A;  3FWC C;  1MUS A;  2XW0 A;  4IW2 A;  1E7F A;  2EFE A;  4F5S A;  2XMO A;  3NVM A;  2BXB A;  1HK2 A;  3A75 A;  4BY9 C;  1J7E A;  3KJL A;  3WHS A;  1E7H A;  4F5U A;  3ICX A;  1N5U A; 
#chains in the Genus database with same CATH homology
 2DBU A;  2XVU A;  2Z8I A;  3KIK A;  5IIU A;  1E7G A;  1MIW A;  2BXI A;  4NAW B;  2VDB A;  4F5T A;  2BXH A;  4Z69 A;  3B9L A;  2EFD A;  4WA6 B;  2XVW A;  1E7A A;  5GIO A;  4OT2 A;  2BXP A;  3VQI A;  5GIN A;  2QHB A;  2QM6 A;  2XVV A;  4J2V A;  4FJC B;  4OTU A;  4GDL B;  1E7E A;  2VUF A;  2BXQ A;  4N0U D;  4G03 A;  4TQ1 A;  4GG2 A;  3LU7 A;  2XVQ A;  4L9K A;  3GQU A;  1AO6 A;  2BXF A;  1VFI A;  4FIP B;  1KW2 A;  3JRY A;  2BXE A;  3NMU A;  4ZBR A;  1J78 A;  4OTT A;  3GA9 L;  1LNS A;  3LU8 A;  4BKE A;  1BKE A;  1JNB A;  4MBE C;  2Z8K A;  3JQZ A;  4M70 B;  5IFO A;  2NQO A;  2VUE A;  3GQX A;  4N3Z A;  1E78 A;  3B9M A;  3M99 C;  4E99 A;  2E0Y A;  2V36 A;  5IJF A;  5D7G A;  2DBX A;  4EMX A;  3NVI A;  1HK1 A;  2DYO A;  1E7B A;  5GHK A;  4L9Q A;  1HK4 A;  2DBW A;  2KBZ A;  2BXO A;  2LOQ A;  2BXM A;  2XW1 A;  4ZBQ A;  1GNI A;  3PLA A;  1IJG A;  2DG5 A;  5FUO A;  4F5V A;  5DQF A;  3NVK A;  4Z9O A;  4TQ0 A;  5IIX A;  4G04 A;  1BJ5 A;  3CX9 A;  3TDL A;  3WHQ A;  4DHX B;  4ZCG A;  4K2C A;  5IIH A;  3FWB C;  1GNJ A;  4C31 B;  4ZUX V;  1TXU A;  5IJE A;  2BXL A;  5B5T A;  3FNM A;  3MHH B;  4JK4 A;  4ZC6 A;  2BXC A;  1VZS A;  2AJE A;  3WHR A;  2OZB B;  1HK5 A;  3W1S A;  3SIU B;  2I2Z A;  1BM0 A;  5GIP A;  4ZBK A;  4K71 A;  1MIY A;  4HGK A;  1HK3 A;  1H5W A;  1MIV A;  2BXK A;  2BXG A;  3LU6 A;  2NNW A;  2DYM A;  4LUF A;  5DBY A;  1E7C A;  4FK5 B;  1LOT A;  1MA9 A;  1TF0 A;  2EFC A;  4G01 A;  5HOZ A;  2Z8J A;  4GDX A;  3V08 A;  3MHS B;  5ID7 A;  4L8U A;  1H9Z A;  2BXA A;  3V09 A;  1O9X A;  4PO0 A;  3A73 A;  2JUH A;  3H37 A;  3H3A A;  4IW1 A;  2ROH A;  1KXP D;  1HA2 A;  4GDK B;  2OT3 A;  4W4U B;  2BX8 A;  4N0F D;  2QMC A;  4S1Y A;  3SIV B;  4LA0 A;  3SQJ A;  2E0X A;  2XSI A;  3V03 A;  4LB9 A;  3G9K D;  5BPK A;  2BXD A;  4OR0 A;  1NT2 B;  2EFH A;  2YDF A;  4HGM B;  5IJ5 A;  1UOR A;  3UIV A;  1E7I A;  2I30 A;  5ID9 A;  2CKX A;  4LB2 A;  2BXN A;  1FOU A;  4LUH A;  3FWC C;  2XW0 A;  4IW2 A;  1E7F A;  2EFE A;  4F5S A;  2XMO A;  3NVM A;  2BXB A;  1HK2 A;  3A75 A;  4BY9 C;  1J7E A;  3KJL A;  3WHS A;  1E7H A;  4F5U A;  3ICX A;  1N5U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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