3SQJA

Recombinant human serum albumin from transgenic plant
Total Genus 230
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
230
sequence length
582
structure length
582
Chain Sequence
HKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transport protein
molecule keywords Serum albumin
publication title Large-scale production of functional human serum albumin from transgenic rice seeds.
pubmed doi rcsb
source organism Homo sapiens
total genus 230
structure length 582
sequence length 582
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-07-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA05
3LU8A 3V08A 4IW1A 4K2CA 3B9MA 1N5UA 1KXPD 1KW2A 3B9LA 2BXFA 1MA9A 2I2ZA 2BXDA 2YDFA 4HGKA 4G04A 4BKEA 1GNJA 4K71A 4LB9A 5IIUA 1E7FA 4LUHA 1BKEA 1J7EA 3V09A 2VDBA 4Z69A 4N0FD 1LOTA 1E78A 5ID9A 2VUFA 5ID7A 3UIVA 4G03A 2BXHA 5IJFA 1BM0A 3JRYA 1UORA 4L8UA 2XVWA 1HK1A 5IJEA 4LUFA 5IIHA 5DQFA 2I30A 4IW2A 4L9QA 1J78A 5FUOA 1TF0A 4LB2A 2BXEA 2BXGA 4F5TA 4F5SA 4HGMB 2BXQA 1E7CA 1HA2A 2VUEA 3TDLA 3CX9A 4EMXA 4E99A 4J2VA 4JK4A 1HK5A 1HK4A 2BXNA 3LU6A 5IFOA 2BXMA 2XW0A 2XW1A 4S1YA 2BXCA 1HK3A 2BXIA 1H9ZA 4OR0A 4F5VA 2XSIA 4N0UD 1E7AA 3JQZA 5IJ5A 5DBYA 1E7IA 1E7GA 2XVQA 5GHKA 4PO0A 1E7EA 5HOZA 2XVVA 1GNIA 1AO6A 2BXKA 2BXBA 1O9XA 2BXOA 2BXPA 1E7HA 2BXAA 4F5UA 1BJ5A 5IIXA 2XVUA 3V03A 3SQJA 4OT2A 4LA0A 3A73A 2BXLA 4L9KA 4ZBRA 1E7BA 3LU7A 1HK2A 2BX8A 4ZBQA
chains in the Genus database with same CATH superfamily
4TQ0A 2LXSA 3LU8A 3V08A 3KJLA 4ZC6A 4IW1A 4K2CA 4Z9OA 3B9MA 1N5UA 1KXPD 1KW2A 3B9LA 1MUHA 3H37A 2BXFA 3M99C 1MA9A 3MHSB 3GQXA 2I2ZA 2BXDA 2YDFA 4HGKA 3WHSA 3GQUA 4G04A 4BKEA 5BPKA 1GNJA 4K71A 4LB9A 5IIUA 2LXTA 2LQHA 1E7FA 4LUHA 4DHXB 1BKEA 1J7EA 3V09A 2QM6A 5B5TA 4DM0A 5GIPA 1VFIA 2VDBA 4G01A 4Z69A 1VZSA 4NAWB 4N0FD 1LOTA 2NQOA 1E78A 5ID9A 2VUFA 4GDXA 4MBEC 5ID7A 3SIVB 3G9KD 3UIVA 3H3AA 1LNSA 1MIWA 2BXHA 3FWCC 4G03A 2LOQA 2K0NA 2Z8IA 3KIKA 5IJFA 2JUHA 1BM0A 2ROHA 2E0XA 3JRYA 3WHRA 3NVKA 1KDXA 1UORA 2Z8JA 4L8UA 2XVWA 3MHHB 1FOUA 1HK1A 3ICXA 2DBXA 2GUTA 5IJEA 1H5WA 4LUFA 5IIHA 5DQFA 2I30A 1MUSA 4FJCB 4IW2A 4I9OA 4L9QA 1J78A 3FNMA 5FUOA 3ECPA 4GDKB 1TF0A 4ZUXV 3NVIA 2OZBB 4LB2A 2BXEA 2BXGA 1IJGA 4F5TA 2E0YA 4F5SA 2OT3A 4HGMB 2DYMA 2BXQA 1E7CA 1HA2A 2EFEA 2VUEA 3FWBC 5D7GA 4OTUA 3TDLA 3CX9A 4EMXA 4E99A 1MM8A 4J2VA 4JK4A 1HK5A 4W4UB 4FK5B 2DBWA 1HK4A 3VQIA 2BXNA 2KBZA 2NNWA 3LU6A 2BXMA 5IFOA 2QHBA 2XW0A 2XW1A 4S1YA 2BXCA 4D7XA 1MIYA 1HK3A 2XMOA 2BXIA 1H9ZA 2DG5A 3A75A 4OR0A 4F5VA 2AGHB 2XSIA 4N0UD 2EFDA 4ZCGA 1E7AA 3JQZA 5IJ5A 5DBYA 4ZBKA 1E7IA 1E7GA 2XVQA 5GHKA 4PO0A 1E7EA 3WHQA 2V36A 2EFHA 4GG2A 3NMUA 5HOZA 1NT2B 3NVMA 1TXUA 2XVVA 1GNIA 2Z8KA 2AJEA 4GDLB 2DYOA 1AO6A 5GIOA 4BY9C 2BXKA 2BXBA 1O9XA 2BXOA 2BXPA 3BPJA 1E7HA 4M70B 2DBUA 4FIPB 2BXAA 4F5UA 2CKXA 1BJ5A 2KWFA 4N3ZA 2XVUA 1JNBA 4C31B 5IIXA 2EFCA 3V03A 3SQJA 4OT2A 4LA0A 3A73A 5GINA 1MIVA 4WA6B 2QMCA 2BXLA 4L9KA 3GA9L 4TQ1A 4ZBRA 1E7BA 3PLAA 1SB0A 2LQIA 3W1SA 4OTTA 3LU7A 1HK2A 2BX8A 3SIUB 4ZBQA
chains in the Genus database with same CATH topology
4TQ0A 3LU8A 3V08A 3KJLA 4ZC6A 4IW1A 4K2CA 4Z9OA 3B9MA 1N5UA 1KXPD 1KW2A 3B9LA 3H37A 2BXFA 3M99C 1MA9A 3MHSB 3GQXA 2I2ZA 2BXDA 2YDFA 4HGKA 3WHSA 3GQUA 4G04A 4BKEA 5BPKA 1GNJA 4K71A 4LB9A 5IIUA 1E7FA 4LUHA 4DHXB 1BKEA 1J7EA 3V09A 2QM6A 5B5TA 5GIPA 1VFIA 2VDBA 4G01A 4Z69A 1VZSA 4NAWB 4N0FD 1LOTA 2NQOA 1E78A 5ID9A 2VUFA 4GDXA 4MBEC 5ID7A 3SIVB 3G9KD 3UIVA 3H3AA 1LNSA 1MIWA 2BXHA 3FWCC 4G03A 2LOQA 2Z8IA 3KIKA 5IJFA 2JUHA 1BM0A 2ROHA 2E0XA 3JRYA 3WHRA 3NVKA 1UORA 2Z8JA 4L8UA 2XVWA 3MHHB 1FOUA 1HK1A 3ICXA 2DBXA 5IJEA 1H5WA 4LUFA 5IIHA 5DQFA 2I30A 4FJCB 4IW2A 4L9QA 1J78A 3FNMA 5FUOA 4GDKB 1TF0A 4ZUXV 3NVIA 2OZBB 4LB2A 2BXEA 2BXGA 1IJGA 4F5TA 2E0YA 4F5SA 2OT3A 4HGMB 2DYMA 2BXQA 1E7CA 1HA2A 2EFEA 2VUEA 3FWBC 5D7GA 4OTUA 3TDLA 3CX9A 4EMXA 4E99A 4J2VA 4JK4A 1HK5A 4W4UB 4FK5B 2DBWA 1HK4A 3VQIA 2BXNA 2KBZA 2NNWA 3LU6A 2BXMA 5IFOA 2QHBA 2XW0A 2XW1A 4S1YA 2BXCA 1MIYA 1HK3A 2XMOA 2BXIA 1H9ZA 2DG5A 3A75A 4OR0A 4F5VA 2XSIA 4N0UD 4ZCGA 2EFDA 1E7AA 3JQZA 5IJ5A 5DBYA 4ZBKA 1E7IA 1E7GA 2XVQA 5GHKA 4PO0A 1E7EA 3WHQA 2V36A 2EFHA 4GG2A 3NMUA 5HOZA 1NT2B 3NVMA 1TXUA 2XVVA 1GNIA 2Z8KA 2AJEA 4GDLB 2DYOA 1AO6A 5GIOA 4BY9C 2BXKA 2BXBA 1O9XA 2BXOA 2BXPA 4M70B 1E7HA 2DBUA 4FIPB 2BXAA 4F5UA 2CKXA 1BJ5A 4N3ZA 2XVUA 1JNBA 4C31B 5IIXA 2EFCA 3V03A 3SQJA 4OT2A 4LA0A 3A73A 5GINA 1MIVA 4WA6B 2QMCA 2BXLA 4L9KA 3GA9L 4TQ1A 4ZBRA 1E7BA 3PLAA 3W1SA 4OTTA 3LU7A 1HK2A 2BX8A 3SIUB 4ZBQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3LU8 A;  3V08 A;  4IW1 A;  4K2C A;  3B9M A;  1N5U A;  1KXP D;  1KW2 A;  3B9L A;  2BXF A;  1MA9 A;  2I2Z A;  2BXD A;  2YDF A;  4HGK A;  4G04 A;  4BKE A;  1GNJ A;  4K71 A;  4LB9 A;  5IIU A;  1E7F A;  4LUH A;  1BKE A;  1J7E A;  3V09 A;  2VDB A;  4Z69 A;  4N0F D;  1LOT A;  1E78 A;  5ID9 A;  2VUF A;  5ID7 A;  3UIV A;  4G03 A;  2BXH A;  5IJF A;  1BM0 A;  3JRY A;  1UOR A;  4L8U A;  2XVW A;  1HK1 A;  5IJE A;  4LUF A;  5IIH A;  5DQF A;  2I30 A;  4IW2 A;  4L9Q A;  1J78 A;  5FUO A;  1TF0 A;  4LB2 A;  2BXE A;  2BXG A;  4F5T A;  4F5S A;  4HGM B;  2BXQ A;  1E7C A;  1HA2 A;  2VUE A;  3TDL A;  3CX9 A;  4EMX A;  4E99 A;  4J2V A;  4JK4 A;  1HK5 A;  1HK4 A;  2BXN A;  3LU6 A;  5IFO A;  2BXM A;  2XW0 A;  2XW1 A;  4S1Y A;  2BXC A;  1HK3 A;  2BXI A;  1H9Z A;  4OR0 A;  4F5V A;  2XSI A;  4N0U D;  1E7A A;  3JQZ A;  5IJ5 A;  5DBY A;  1E7I A;  1E7G A;  2XVQ A;  5GHK A;  4PO0 A;  1E7E A;  5HOZ A;  2XVV A;  1GNI A;  1AO6 A;  2BXK A;  2BXB A;  1O9X A;  2BXO A;  2BXP A;  1E7H A;  2BXA A;  4F5U A;  1BJ5 A;  5IIX A;  2XVU A;  3V03 A;  3SQJ A;  4OT2 A;  4LA0 A;  3A73 A;  2BXL A;  4L9K A;  4ZBR A;  1E7B A;  3LU7 A;  1HK2 A;  2BX8 A;  4ZBQ A; 
#chains in the Genus database with same CATH topology
 4TQ0 A;  2LXS A;  3LU8 A;  3V08 A;  3KJL A;  4ZC6 A;  4IW1 A;  4K2C A;  4Z9O A;  3B9M A;  1N5U A;  1KXP D;  1KW2 A;  3B9L A;  1MUH A;  3H37 A;  2BXF A;  3M99 C;  1MA9 A;  3MHS B;  3GQX A;  2I2Z A;  2BXD A;  2YDF A;  4HGK A;  3WHS A;  3GQU A;  4G04 A;  4BKE A;  5BPK A;  1GNJ A;  4K71 A;  4LB9 A;  5IIU A;  2LXT A;  2LQH A;  1E7F A;  4LUH A;  4DHX B;  1BKE A;  1J7E A;  3V09 A;  2QM6 A;  5B5T A;  4DM0 A;  5GIP A;  1VFI A;  2VDB A;  4G01 A;  4Z69 A;  1VZS A;  4NAW B;  4N0F D;  1LOT A;  2NQO A;  1E78 A;  5ID9 A;  2VUF A;  4GDX A;  4MBE C;  5ID7 A;  3SIV B;  3G9K D;  3UIV A;  3H3A A;  1LNS A;  1MIW A;  2BXH A;  3FWC C;  4G03 A;  2LOQ A;  2K0N A;  2Z8I A;  3KIK A;  5IJF A;  2JUH A;  1BM0 A;  2ROH A;  2E0X A;  3JRY A;  3WHR A;  3NVK A;  1KDX A;  1UOR A;  2Z8J A;  4L8U A;  2XVW A;  3MHH B;  1FOU A;  1HK1 A;  3ICX A;  2DBX A;  2GUT A;  5IJE A;  1H5W A;  4LUF A;  5IIH A;  5DQF A;  2I30 A;  1MUS A;  4FJC B;  4IW2 A;  4I9O A;  4L9Q A;  1J78 A;  3FNM A;  5FUO A;  3ECP A;  4GDK B;  1TF0 A;  4ZUX V;  3NVI A;  2OZB B;  4LB2 A;  2BXE A;  2BXG A;  1IJG A;  4F5T A;  2E0Y A;  4F5S A;  2OT3 A;  4HGM B;  2DYM A;  2BXQ A;  1E7C A;  1HA2 A;  2EFE A;  2VUE A;  3FWB C;  5D7G A;  4OTU A;  3TDL A;  3CX9 A;  4EMX A;  4E99 A;  1MM8 A;  4J2V A;  4JK4 A;  1HK5 A;  4W4U B;  4FK5 B;  2DBW A;  1HK4 A;  3VQI A;  2BXN A;  2KBZ A;  2NNW A;  3LU6 A;  2BXM A;  5IFO A;  2QHB A;  2XW0 A;  2XW1 A;  4S1Y A;  2BXC A;  4D7X A;  1MIY A;  1HK3 A;  2XMO A;  2BXI A;  1H9Z A;  2DG5 A;  3A75 A;  4OR0 A;  4F5V A;  2AGH B;  2XSI A;  4N0U D;  2EFD A;  4ZCG A;  1E7A A;  3JQZ A;  5IJ5 A;  5DBY A;  4ZBK A;  1E7I A;  1E7G A;  2XVQ A;  5GHK A;  4PO0 A;  1E7E A;  3WHQ A;  2V36 A;  2EFH A;  4GG2 A;  3NMU A;  5HOZ A;  1NT2 B;  3NVM A;  1TXU A;  2XVV A;  1GNI A;  2Z8K A;  2AJE A;  4GDL B;  2DYO A;  1AO6 A;  5GIO A;  4BY9 C;  2BXK A;  2BXB A;  1O9X A;  2BXO A;  2BXP A;  3BPJ A;  1E7H A;  4M70 B;  2DBU A;  4FIP B;  2BXA A;  4F5U A;  2CKX A;  1BJ5 A;  2KWF A;  4N3Z A;  2XVU A;  1JNB A;  4C31 B;  5IIX A;  2EFC A;  3V03 A;  3SQJ A;  4OT2 A;  4LA0 A;  3A73 A;  5GIN A;  1MIV A;  4WA6 B;  2QMC A;  2BXL A;  4L9K A;  3GA9 L;  4TQ1 A;  4ZBR A;  1E7B A;  3PLA A;  1SB0 A;  2LQI A;  3W1S A;  4OTT A;  3LU7 A;  1HK2 A;  2BX8 A;  3SIU B;  4ZBQ A; 
#chains in the Genus database with same CATH homology
 4TQ0 A;  3LU8 A;  3V08 A;  3KJL A;  4ZC6 A;  4IW1 A;  4K2C A;  4Z9O A;  3B9M A;  1N5U A;  1KXP D;  1KW2 A;  3B9L A;  3H37 A;  2BXF A;  3M99 C;  1MA9 A;  3MHS B;  3GQX A;  2I2Z A;  2BXD A;  2YDF A;  4HGK A;  3WHS A;  3GQU A;  4G04 A;  4BKE A;  5BPK A;  1GNJ A;  4K71 A;  4LB9 A;  5IIU A;  1E7F A;  4LUH A;  4DHX B;  1BKE A;  1J7E A;  3V09 A;  2QM6 A;  5B5T A;  5GIP A;  1VFI A;  2VDB A;  4G01 A;  4Z69 A;  1VZS A;  4NAW B;  4N0F D;  1LOT A;  2NQO A;  1E78 A;  5ID9 A;  2VUF A;  4GDX A;  4MBE C;  5ID7 A;  3SIV B;  3G9K D;  3UIV A;  3H3A A;  1LNS A;  1MIW A;  2BXH A;  3FWC C;  4G03 A;  2LOQ A;  2Z8I A;  3KIK A;  5IJF A;  2JUH A;  1BM0 A;  2ROH A;  2E0X A;  3JRY A;  3WHR A;  3NVK A;  1UOR A;  2Z8J A;  4L8U A;  2XVW A;  3MHH B;  1FOU A;  1HK1 A;  3ICX A;  2DBX A;  5IJE A;  1H5W A;  4LUF A;  5IIH A;  5DQF A;  2I30 A;  4FJC B;  4IW2 A;  4L9Q A;  1J78 A;  3FNM A;  5FUO A;  4GDK B;  1TF0 A;  4ZUX V;  3NVI A;  2OZB B;  4LB2 A;  2BXE A;  2BXG A;  1IJG A;  4F5T A;  2E0Y A;  4F5S A;  2OT3 A;  4HGM B;  2DYM A;  2BXQ A;  1E7C A;  1HA2 A;  2EFE A;  2VUE A;  3FWB C;  5D7G A;  4OTU A;  3TDL A;  3CX9 A;  4EMX A;  4E99 A;  4J2V A;  4JK4 A;  1HK5 A;  4W4U B;  4FK5 B;  2DBW A;  1HK4 A;  3VQI A;  2BXN A;  2KBZ A;  2NNW A;  3LU6 A;  2BXM A;  5IFO A;  2QHB A;  2XW0 A;  2XW1 A;  4S1Y A;  2BXC A;  1MIY A;  1HK3 A;  2XMO A;  2BXI A;  1H9Z A;  2DG5 A;  3A75 A;  4OR0 A;  4F5V A;  2XSI A;  4N0U D;  4ZCG A;  2EFD A;  1E7A A;  3JQZ A;  5IJ5 A;  5DBY A;  4ZBK A;  1E7I A;  1E7G A;  2XVQ A;  5GHK A;  4PO0 A;  1E7E A;  3WHQ A;  2V36 A;  2EFH A;  4GG2 A;  3NMU A;  5HOZ A;  1NT2 B;  3NVM A;  1TXU A;  2XVV A;  1GNI A;  2Z8K A;  2AJE A;  4GDL B;  2DYO A;  1AO6 A;  5GIO A;  4BY9 C;  2BXK A;  2BXB A;  1O9X A;  2BXO A;  2BXP A;  4M70 B;  1E7H A;  2DBU A;  4FIP B;  2BXA A;  4F5U A;  2CKX A;  1BJ5 A;  4N3Z A;  2XVU A;  1JNB A;  4C31 B;  5IIX A;  2EFC A;  3V03 A;  3SQJ A;  4OT2 A;  4LA0 A;  3A73 A;  5GIN A;  1MIV A;  4WA6 B;  2QMC A;  2BXL A;  4L9K A;  3GA9 L;  4TQ1 A;  4ZBR A;  1E7B A;  3PLA A;  3W1S A;  4OTT A;  3LU7 A;  1HK2 A;  2BX8 A;  3SIU B;  4ZBQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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