1GNIA

Human serum albumin complexed with cis-9-octadecenoic acid (oleic acid)
Total Genus 215
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
215
sequence length
582
structure length
582
Chain Sequence
HKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords SERUM ALBUMIN
publication title Crystal Structures of Human Serum Albumin Complexed with Monounsaturated and Polyunsaturated Fatty Acids.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Plasma protein
total genus 215
structure length 582
sequence length 582
ec nomenclature
pdb deposition date 2001-10-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1gniA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1gniA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1gniA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1gniA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1gniA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1gniA05
1E7CA 4N0UD 1HK4A 1UORA 4BKEA 4K71A 4K2CA 2BXKA 1J7EA 3V03A 5IIXA 2BXMA 2XSIA 2BXEA 2XVQA 1E78A 1HK5A 4HGKA 1LOTA 3SQJA 1BM0A 4L9KA 4F5UA 2I2ZA 5ID9A 2BXNA 4E99A 3LU8A 4Z69A 1MA9A 1AO6A 1E7AA 2BXOA 3UIVA 3B9LA 2XW1A 5DQFA 4EMXA 4ZBQA 2BXQA 1E7HA 1N5UA 3LU7A 4F5SA 4IW2A 2XVVA 3CX9A 2BXAA 4G03A 1E7IA 5IJFA 1TF0A 1HA2A 3LU6A 2XW0A 1HK2A 1E7EA 3V09A 2BXCA 1E7GA 4J2VA 2BX8A 2XVWA 1H9ZA 1KXPD 3V08A 2VDBA 1HK3A 4N0FD 5IJEA 1GNIA 5IFOA 4HGMB 1BJ5A 4S1YA 5HOZA 4L8UA 2VUFA 4LA0A 1HK1A 4IW1A 2BXDA 3A73A 2I30A 2BXPA 1J78A 4LUHA 4JK4A 2BXFA 5ID7A 5FUOA 1E7FA 4PO0A 3TDLA 5IIUA 4G04A 3B9MA 3JRYA 2XVUA 1E7BA 4OT2A 1KW2A 2BXGA 4ZBRA 5IJ5A 1BKEA 2BXHA 2YDFA 4F5TA 1O9XA 2BXIA 2VUEA 4OR0A 2BXLA 4L9QA 4LUFA 3JQZA 5GHKA 4LB9A 1GNJA 5IIHA 4LB2A 2BXBA 4F5VA 5DBYA
chains in the Genus database with same CATH superfamily
5GIPA 2QMCA 1E7CA 3KJLA 4N0UD 5B5TA 1HK4A 1UORA 4N3ZA 4BKEA 2KBZA 2OT3A 4K2CA 4K71A 2BXKA 2XMOA 4TQ1A 4FJCB 1J7EA 3V03A 4FK5B 5IIXA 2QHBA 2BXMA 2XSIA 3VQIA 1MUHA 2BXEA 2XVQA 2EFCA 1E78A 1HK5A 4HGKA 1LOTA 3SQJA 1BM0A 2EFDA 3GQUA 4L9KA 4F5UA 2I2ZA 3GA9L 3ECPA 2LQHA 4DM0A 5ID9A 2BXNA 4E99A 3LU8A 4Z69A 1MA9A 1AO6A 1E7AA 2DBXA 2K0NA 1FOUA 4DHXB 2BXOA 3UIVA 4I9OA 2LQIA 3B9LA 1JNBA 2XW1A 3H3AA 2E0YA 2LXSA 3W1SA 5DQFA 1LNSA 4EMXA 2E0XA 2NQOA 2Z8IA 3G9KD 4GDLB 4ZBQA 2BXQA 1E7HA 1N5UA 2AGHB 2EFHA 3MHHB 3LU7A 3MHSB 2AJEA 4F5SA 4IW2A 2XVVA 3ICXA 3CX9A 5D7GA 2BXAA 4OTTA 5BPKA 4G03A 1E7IA 2DYOA 3A75A 3WHQA 2DBUA 5IJFA 1TF0A 1HA2A 3LU6A 2XW0A 3H37A 1HK2A 1E7EA 4ZBKA 3V09A 3NMUA 2BXCA 1E7GA 2DBWA 3NVKA 2EFEA 1H5WA 1SB0A 2GUTA 3FWBC 2DYMA 4J2VA 2BX8A 2LOQA 1H9ZA 2XVWA 4G01A 4ZUXV 1IJGA 4WA6B 1KXPD 4BY9C 1MIYA 2V36A 2QM6A 4NAWB 3V08A 2VDBA 1HK3A 4N0FD 5IJEA 4ZCGA 3SIUB 4FIPB 1GNIA 4M70B 4HGMB 5IFOA 3NVMA 1BJ5A 4ZC6A 3FWCC 3KIKA 1MIVA 4S1YA 5HOZA 1VZSA 4L8UA 2VUFA 4LA0A 1HK1A 4IW1A 4OTUA 2BXDA 3A73A 4GDKB 2I30A 3M99C 2ROHA 1TXUA 2BXPA 1J78A 3GQXA 4LUHA 4JK4A 2BXFA 2Z8JA 4TQ0A 5ID7A 4GG2A 2KWFA 3WHRA 5FUOA 1E7FA 4PO0A 3TDLA 1KDXA 5IIUA 2LXTA 3B9MA 3JRYA 4G04A 4C31B 2XVUA 3PLAA 1E7BA 4OT2A 4GDXA 1KW2A 1MM8A 2BXGA 4D7XA 3FNMA 4ZBRA 4MBEC 5IJ5A 1BKEA 4Z9OA 2BXHA 2YDFA 3WHSA 4F5TA 5GIOA 1O9XA 2BXIA 1NT2B 5GINA 2DG5A 2VUEA 4OR0A 3NVIA 2BXLA 4L9QA 3SIVB 1VFIA 2NNWA 4LUFA 2JUHA 3JQZA 5GHKA 1MIWA 1GNJA 4LB9A 5IIHA 4W4UB 4LB2A 2BXBA 3BPJA 4F5VA 2CKXA 5DBYA 2Z8KA 2OZBB 1MUSA
chains in the Genus database with same CATH topology
5GIPA 2QMCA 1E7CA 3KJLA 4N0UD 5B5TA 1HK4A 1UORA 4N3ZA 4BKEA 2KBZA 2OT3A 4K2CA 4K71A 2BXKA 2XMOA 4TQ1A 4FJCB 1J7EA 3V03A 4FK5B 5IIXA 2QHBA 2BXMA 2XSIA 3VQIA 2BXEA 2XVQA 2EFCA 1E78A 1HK5A 4HGKA 1LOTA 3SQJA 1BM0A 2EFDA 3GQUA 4L9KA 4F5UA 2I2ZA 3GA9L 5ID9A 2BXNA 4E99A 3LU8A 4Z69A 1MA9A 1AO6A 1E7AA 2DBXA 1FOUA 4DHXB 2BXOA 3UIVA 3B9LA 1JNBA 2XW1A 3H3AA 2E0YA 3W1SA 5DQFA 1LNSA 4EMXA 2E0XA 2NQOA 2Z8IA 3G9KD 4GDLB 4ZBQA 2BXQA 1E7HA 1N5UA 3MHHB 2EFHA 3LU7A 3MHSB 2AJEA 4F5SA 4IW2A 2XVVA 3ICXA 3CX9A 5D7GA 2BXAA 4OTTA 5BPKA 4G03A 1E7IA 2DYOA 3A75A 3WHQA 2DBUA 5IJFA 1TF0A 1HA2A 3LU6A 2XW0A 3H37A 1HK2A 1E7EA 4ZBKA 3V09A 3NMUA 2BXCA 1E7GA 2DBWA 3NVKA 2EFEA 1H5WA 3FWBC 2DYMA 4J2VA 2BX8A 2LOQA 1H9ZA 2XVWA 4G01A 4ZUXV 1IJGA 4WA6B 1KXPD 4BY9C 1MIYA 2V36A 2QM6A 4NAWB 3V08A 2VDBA 1HK3A 4N0FD 5IJEA 4ZCGA 3SIUB 4FIPB 1GNIA 4M70B 4HGMB 5IFOA 3NVMA 1BJ5A 4ZC6A 3FWCC 3KIKA 1MIVA 4S1YA 5HOZA 1VZSA 4L8UA 2VUFA 4LA0A 1HK1A 4IW1A 4OTUA 2BXDA 3A73A 4GDKB 2I30A 3M99C 2ROHA 1TXUA 2BXPA 1J78A 3GQXA 4LUHA 4JK4A 2BXFA 2Z8JA 4TQ0A 5ID7A 4GG2A 3WHRA 5FUOA 1E7FA 4PO0A 3TDLA 5IIUA 4G04A 3B9MA 3JRYA 4C31B 2XVUA 3PLAA 1E7BA 4OT2A 4GDXA 1KW2A 2BXGA 3FNMA 4ZBRA 4MBEC 5IJ5A 1BKEA 4Z9OA 2BXHA 2YDFA 3WHSA 4F5TA 5GIOA 1O9XA 2BXIA 1NT2B 5GINA 2DG5A 2VUEA 4OR0A 3NVIA 2BXLA 4L9QA 3SIVB 1VFIA 2NNWA 4LUFA 2JUHA 3JQZA 5GHKA 1MIWA 1GNJA 4LB9A 5IIHA 4W4UB 4LB2A 2BXBA 4F5VA 2CKXA 5DBYA 2Z8KA 2OZBB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1E7C A;  4N0U D;  1HK4 A;  1UOR A;  4BKE A;  4K71 A;  4K2C A;  2BXK A;  1J7E A;  3V03 A;  5IIX A;  2BXM A;  2XSI A;  2BXE A;  2XVQ A;  1E78 A;  1HK5 A;  4HGK A;  1LOT A;  3SQJ A;  1BM0 A;  4L9K A;  4F5U A;  2I2Z A;  5ID9 A;  2BXN A;  4E99 A;  3LU8 A;  4Z69 A;  1MA9 A;  1AO6 A;  1E7A A;  2BXO A;  3UIV A;  3B9L A;  2XW1 A;  5DQF A;  4EMX A;  4ZBQ A;  2BXQ A;  1E7H A;  1N5U A;  3LU7 A;  4F5S A;  4IW2 A;  2XVV A;  3CX9 A;  2BXA A;  4G03 A;  1E7I A;  5IJF A;  1TF0 A;  1HA2 A;  3LU6 A;  2XW0 A;  1HK2 A;  1E7E A;  3V09 A;  2BXC A;  1E7G A;  4J2V A;  2BX8 A;  2XVW A;  1H9Z A;  1KXP D;  3V08 A;  2VDB A;  1HK3 A;  4N0F D;  5IJE A;  1GNI A;  5IFO A;  4HGM B;  1BJ5 A;  4S1Y A;  5HOZ A;  4L8U A;  2VUF A;  4LA0 A;  1HK1 A;  4IW1 A;  2BXD A;  3A73 A;  2I30 A;  2BXP A;  1J78 A;  4LUH A;  4JK4 A;  2BXF A;  5ID7 A;  5FUO A;  1E7F A;  4PO0 A;  3TDL A;  5IIU A;  4G04 A;  3B9M A;  3JRY A;  2XVU A;  1E7B A;  4OT2 A;  1KW2 A;  2BXG A;  4ZBR A;  5IJ5 A;  1BKE A;  2BXH A;  2YDF A;  4F5T A;  1O9X A;  2BXI A;  2VUE A;  4OR0 A;  2BXL A;  4L9Q A;  4LUF A;  3JQZ A;  5GHK A;  4LB9 A;  1GNJ A;  5IIH A;  4LB2 A;  2BXB A;  4F5V A;  5DBY A; 
#chains in the Genus database with same CATH topology
 5GIP A;  2QMC A;  1E7C A;  3KJL A;  4N0U D;  5B5T A;  1HK4 A;  1UOR A;  4N3Z A;  4BKE A;  2KBZ A;  2OT3 A;  4K2C A;  4K71 A;  2BXK A;  2XMO A;  4TQ1 A;  4FJC B;  1J7E A;  3V03 A;  4FK5 B;  5IIX A;  2QHB A;  2BXM A;  2XSI A;  3VQI A;  1MUH A;  2BXE A;  2XVQ A;  2EFC A;  1E78 A;  1HK5 A;  4HGK A;  1LOT A;  3SQJ A;  1BM0 A;  2EFD A;  3GQU A;  4L9K A;  4F5U A;  2I2Z A;  3GA9 L;  3ECP A;  2LQH A;  4DM0 A;  5ID9 A;  2BXN A;  4E99 A;  3LU8 A;  4Z69 A;  1MA9 A;  1AO6 A;  1E7A A;  2DBX A;  2K0N A;  1FOU A;  4DHX B;  2BXO A;  3UIV A;  4I9O A;  2LQI A;  3B9L A;  1JNB A;  2XW1 A;  3H3A A;  2E0Y A;  2LXS A;  3W1S A;  5DQF A;  1LNS A;  4EMX A;  2E0X A;  2NQO A;  2Z8I A;  3G9K D;  4GDL B;  4ZBQ A;  2BXQ A;  1E7H A;  1N5U A;  2AGH B;  2EFH A;  3MHH B;  3LU7 A;  3MHS B;  2AJE A;  4F5S A;  4IW2 A;  2XVV A;  3ICX A;  3CX9 A;  5D7G A;  2BXA A;  4OTT A;  5BPK A;  4G03 A;  1E7I A;  2DYO A;  3A75 A;  3WHQ A;  2DBU A;  5IJF A;  1TF0 A;  1HA2 A;  3LU6 A;  2XW0 A;  3H37 A;  1HK2 A;  1E7E A;  4ZBK A;  3V09 A;  3NMU A;  2BXC A;  1E7G A;  2DBW A;  3NVK A;  2EFE A;  1H5W A;  1SB0 A;  2GUT A;  3FWB C;  2DYM A;  4J2V A;  2BX8 A;  2LOQ A;  1H9Z A;  2XVW A;  4G01 A;  4ZUX V;  1IJG A;  4WA6 B;  1KXP D;  4BY9 C;  1MIY A;  2V36 A;  2QM6 A;  4NAW B;  3V08 A;  2VDB A;  1HK3 A;  4N0F D;  5IJE A;  4ZCG A;  3SIU B;  4FIP B;  1GNI A;  4M70 B;  4HGM B;  5IFO A;  3NVM A;  1BJ5 A;  4ZC6 A;  3FWC C;  3KIK A;  1MIV A;  4S1Y A;  5HOZ A;  1VZS A;  4L8U A;  2VUF A;  4LA0 A;  1HK1 A;  4IW1 A;  4OTU A;  2BXD A;  3A73 A;  4GDK B;  2I30 A;  3M99 C;  2ROH A;  1TXU A;  2BXP A;  1J78 A;  3GQX A;  4LUH A;  4JK4 A;  2BXF A;  2Z8J A;  4TQ0 A;  5ID7 A;  4GG2 A;  2KWF A;  3WHR A;  5FUO A;  1E7F A;  4PO0 A;  3TDL A;  1KDX A;  5IIU A;  2LXT A;  3B9M A;  3JRY A;  4G04 A;  4C31 B;  2XVU A;  3PLA A;  1E7B A;  4OT2 A;  4GDX A;  1KW2 A;  1MM8 A;  2BXG A;  4D7X A;  3FNM A;  4ZBR A;  4MBE C;  5IJ5 A;  1BKE A;  4Z9O A;  2BXH A;  2YDF A;  3WHS A;  4F5T A;  5GIO A;  1O9X A;  2BXI A;  1NT2 B;  5GIN A;  2DG5 A;  2VUE A;  4OR0 A;  3NVI A;  2BXL A;  4L9Q A;  3SIV B;  1VFI A;  2NNW A;  4LUF A;  2JUH A;  3JQZ A;  5GHK A;  1MIW A;  1GNJ A;  4LB9 A;  5IIH A;  4W4U B;  4LB2 A;  2BXB A;  3BPJ A;  4F5V A;  2CKX A;  5DBY A;  2Z8K A;  2OZB B;  1MUS A; 
#chains in the Genus database with same CATH homology
 5GIP A;  2QMC A;  1E7C A;  3KJL A;  4N0U D;  5B5T A;  1HK4 A;  1UOR A;  4N3Z A;  4BKE A;  2KBZ A;  2OT3 A;  4K2C A;  4K71 A;  2BXK A;  2XMO A;  4TQ1 A;  4FJC B;  1J7E A;  3V03 A;  4FK5 B;  5IIX A;  2QHB A;  2BXM A;  2XSI A;  3VQI A;  2BXE A;  2XVQ A;  2EFC A;  1E78 A;  1HK5 A;  4HGK A;  1LOT A;  3SQJ A;  1BM0 A;  2EFD A;  3GQU A;  4L9K A;  4F5U A;  2I2Z A;  3GA9 L;  5ID9 A;  2BXN A;  4E99 A;  3LU8 A;  4Z69 A;  1MA9 A;  1AO6 A;  1E7A A;  2DBX A;  1FOU A;  4DHX B;  2BXO A;  3UIV A;  3B9L A;  1JNB A;  2XW1 A;  3H3A A;  2E0Y A;  3W1S A;  5DQF A;  1LNS A;  4EMX A;  2E0X A;  2NQO A;  2Z8I A;  3G9K D;  4GDL B;  4ZBQ A;  2BXQ A;  1E7H A;  1N5U A;  3MHH B;  2EFH A;  3LU7 A;  3MHS B;  2AJE A;  4F5S A;  4IW2 A;  2XVV A;  3ICX A;  3CX9 A;  5D7G A;  2BXA A;  4OTT A;  5BPK A;  4G03 A;  1E7I A;  2DYO A;  3A75 A;  3WHQ A;  2DBU A;  5IJF A;  1TF0 A;  1HA2 A;  3LU6 A;  2XW0 A;  3H37 A;  1HK2 A;  1E7E A;  4ZBK A;  3V09 A;  3NMU A;  2BXC A;  1E7G A;  2DBW A;  3NVK A;  2EFE A;  1H5W A;  3FWB C;  2DYM A;  4J2V A;  2BX8 A;  2LOQ A;  1H9Z A;  2XVW A;  4G01 A;  4ZUX V;  1IJG A;  4WA6 B;  1KXP D;  4BY9 C;  1MIY A;  2V36 A;  2QM6 A;  4NAW B;  3V08 A;  2VDB A;  1HK3 A;  4N0F D;  5IJE A;  4ZCG A;  3SIU B;  4FIP B;  1GNI A;  4M70 B;  4HGM B;  5IFO A;  3NVM A;  1BJ5 A;  4ZC6 A;  3FWC C;  3KIK A;  1MIV A;  4S1Y A;  5HOZ A;  1VZS A;  4L8U A;  2VUF A;  4LA0 A;  1HK1 A;  4IW1 A;  4OTU A;  2BXD A;  3A73 A;  4GDK B;  2I30 A;  3M99 C;  2ROH A;  1TXU A;  2BXP A;  1J78 A;  3GQX A;  4LUH A;  4JK4 A;  2BXF A;  2Z8J A;  4TQ0 A;  5ID7 A;  4GG2 A;  3WHR A;  5FUO A;  1E7F A;  4PO0 A;  3TDL A;  5IIU A;  4G04 A;  3B9M A;  3JRY A;  4C31 B;  2XVU A;  3PLA A;  1E7B A;  4OT2 A;  4GDX A;  1KW2 A;  2BXG A;  3FNM A;  4ZBR A;  4MBE C;  5IJ5 A;  1BKE A;  4Z9O A;  2BXH A;  2YDF A;  3WHS A;  4F5T A;  5GIO A;  1O9X A;  2BXI A;  1NT2 B;  5GIN A;  2DG5 A;  2VUE A;  4OR0 A;  3NVI A;  2BXL A;  4L9Q A;  3SIV B;  1VFI A;  2NNW A;  4LUF A;  2JUH A;  3JQZ A;  5GHK A;  1MIW A;  1GNJ A;  4LB9 A;  5IIH A;  4W4U B;  4LB2 A;  2BXB A;  4F5V A;  2CKX A;  5DBY A;  2Z8K A;  2OZB B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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