1BM0A

Crystal structure of human serum albumin
Total Genus 217
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
217
sequence length
578
structure length
578
Chain Sequence
SEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Carrier protein
molecule keywords SERUM ALBUMIN
publication title Crystal structure of human serum albumin at 2.5 A resolution.
pubmed doi rcsb
source organism Homo sapiens
total genus 217
structure length 578
sequence length 578
chains with identical sequence B
ec nomenclature
pdb deposition date 1998-07-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1bm0A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1bm0A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1bm0A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1bm0A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1bm0A06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1bm0A05
2I30A 4G03A 4OT2A 2VUFA 1BJ5A 2XVUA 1E7EA 2BXHA 3JRYA 3LU8A 2XVWA 1TF0A 3UIVA 1UORA 1GNIA 2XSIA 5IJ5A 5ID9A 5IIXA 4IW1A 2BXBA 4N0FD 5GHKA 4EMXA 4LUFA 2BXLA 5IFOA 5FUOA 5ID7A 2VDBA 4G04A 1E7CA 1GNJA 2VUEA 2I2ZA 3V08A 2XVQA 4LB9A 5IJEA 4HGKA 4L9KA 4HGMB 1E7BA 1E78A 2BXNA 2BXQA 2BXDA 3LU6A 4IW2A 4BKEA 5IJFA 4Z69A 1E7GA 1HK1A 1KXPD 4LUHA 4L8UA 2BXAA 2BXFA 4JK4A 1E7AA 2BXPA 3V09A 3B9MA 1E7FA 5HOZA 1H9ZA 5IIHA 5DBYA 2BXCA 2BXEA 1AO6A 2BXMA 4LA0A 3TDLA 4OR0A 4K71A 1HK4A 1J7EA 2BXIA 2XW1A 1BKEA 1E7IA 1O9XA 3A73A 2XVVA 1HK3A 1HA2A 4K2CA 3JQZA 2XW0A 4ZBQA 4F5TA 4LB2A 4PO0A 1HK5A 1LOTA 3V03A 4F5SA 3CX9A 2BXKA 1BM0A 4S1YA 2BX8A 1MA9A 4F5UA 1KW2A 2YDFA 4J2VA 4L9QA 1HK2A 5IIUA 4N0UD 3B9LA 4F5VA 2BXGA 5DQFA 4ZBRA 4E99A 3SQJA 2BXOA 3LU7A 1N5UA 1J78A 1E7HA
chains in the Genus database with same CATH superfamily
2I30A 1MIYA 4GG2A 4G03A 4OT2A 2VUFA 1BJ5A 4FIPB 1FOUA 2EFDA 3VQIA 2XVUA 3WHSA 1LNSA 4Z9OA 5GINA 1E7EA 2EFHA 4OTUA 2DYMA 2QMCA 1IJGA 2BXHA 3PLAA 2E0YA 3JRYA 3LU8A 2XVWA 3MHSB 1MUHA 2LQHA 1TF0A 3LU7A 1UORA 3UIVA 2V36A 4WA6B 4ZCGA 1GNIA 2XSIA 3FWBC 3H3AA 5IJ5A 2JUHA 4GDXA 5ID9A 4IW1A 5IIXA 2BXBA 4N0FD 4M70B 3MHHB 5GHKA 4EMXA 4LUFA 5B5TA 4ZBKA 2DYOA 2BXLA 3A75A 4MBEC 5IFOA 5FUOA 5ID7A 1MM8A 2VDBA 4G04A 1E7CA 4D7XA 2GUTA 1GNJA 3BPJA 2VUEA 2I2ZA 3V08A 1MIVA 1KDXA 2XVQA 4LB9A 1JNBA 5IJEA 4HGKA 2ROHA 4L9KA 4BY9C 4HGMB 2K0NA 1E7BA 1E78A 2BXNA 2BXQA 2BXDA 3LU6A 4IW2A 4BKEA 5IJFA 4Z69A 1E7GA 2XMOA 3KJLA 1HK1A 3WHRA 1KXPD 3GA9L 4NAWB 4LUHA 4L8UA 2Z8KA 2BXAA 2BXFA 4JK4A 1E7AA 2BXPA 2EFEA 1VZSA 3V09A 2LXSA 3B9MA 1E7FA 5HOZA 3SIUB 2DBWA 3FWCC 4I9OA 4ZC6A 4TQ0A 1H9ZA 3NVMA 4G01A 2EFCA 5IIHA 5GIPA 5DBYA 2BXCA 5BPKA 2DBXA 2BXEA 1AO6A 2DG5A 3NVIA 2BXMA 4LA0A 1TXUA 2E0XA 3KIKA 3TDLA 2DBUA 2KBZA 4OR0A 3NMUA 4C31B 1NT2B 4GDKB 1E7HA 4K71A 2LXTA 2QM6A 2QHBA 1HK4A 2BXIA 2XW1A 4FK5B 1BKEA 1E7IA 2Z8IA 2AGHB 2OZBB 1O9XA 2CKXA 3M99C 3A73A 2XVVA 1HK3A 1HA2A 4W4UB 4K2CA 3JQZA 4DHXB 4DM0A 2XW0A 4N3ZA 4ZBQA 2NQOA 4F5TA 4LB2A 3ICXA 3SIVB 4PO0A 1HK5A 1LOTA 3V03A 2KWFA 4TQ1A 3NVKA 3GQXA 1MUSA 4F5SA 5D7GA 3CX9A 4FJCB 4GDLB 1SB0A 2BXKA 5GIOA 1BM0A 2NNWA 3W1SA 2LQIA 4S1YA 2OT3A 2BX8A 1MA9A 4F5UA 3FNMA 1KW2A 2YDFA 4J2VA 4L9QA 1HK2A 3ECPA 3H37A 4OTTA 2LOQA 3G9KD 5IIUA 4N0UD 3B9LA 3GQUA 2BXGA 4F5VA 5DQFA 4ZUXV 4ZBRA 4E99A 3SQJA 2Z8JA 1VFIA 2BXOA 1H5WA 1J7EA 1N5UA 1J78A 1MIWA 2AJEA 3WHQA
chains in the Genus database with same CATH topology
2I30A 1MIYA 4GG2A 4G03A 4OT2A 2VUFA 1BJ5A 4FIPB 1FOUA 2EFDA 3VQIA 2XVUA 3WHSA 1LNSA 4Z9OA 5GINA 1E7EA 2EFHA 4OTUA 2DYMA 2QMCA 1IJGA 2BXHA 3PLAA 2E0YA 3JRYA 3LU8A 2XVWA 3MHSB 1TF0A 3LU7A 1UORA 3UIVA 2V36A 4WA6B 4ZCGA 1GNIA 2XSIA 3FWBC 3H3AA 5IJ5A 2JUHA 4GDXA 5ID9A 4IW1A 5IIXA 2BXBA 4N0FD 4M70B 3MHHB 5GHKA 4EMXA 4LUFA 5B5TA 4ZBKA 2DYOA 2BXLA 3A75A 4MBEC 5IFOA 5FUOA 5ID7A 2VDBA 4G04A 1E7CA 1GNJA 2VUEA 2I2ZA 3V08A 1MIVA 2XVQA 4LB9A 1JNBA 5IJEA 4HGKA 2ROHA 4L9KA 4BY9C 4HGMB 1E7BA 1E78A 2BXNA 2BXQA 2BXDA 3LU6A 4IW2A 4BKEA 5IJFA 4Z69A 1E7GA 2XMOA 3KJLA 1HK1A 3WHRA 1KXPD 3GA9L 4NAWB 4LUHA 4L8UA 2Z8KA 2BXAA 2BXFA 4JK4A 1E7AA 2BXPA 2EFEA 1VZSA 3V09A 3B9MA 1E7FA 5HOZA 3SIUB 2DBWA 3FWCC 4ZC6A 4TQ0A 1H9ZA 3NVMA 4G01A 2EFCA 5IIHA 5GIPA 5DBYA 2BXCA 5BPKA 2DBXA 2BXEA 1AO6A 2DG5A 3NVIA 2BXMA 4LA0A 1TXUA 2E0XA 3KIKA 3TDLA 2DBUA 2KBZA 4OR0A 3NMUA 4C31B 1NT2B 4GDKB 1E7HA 4K71A 2QM6A 2QHBA 1HK4A 2BXIA 2XW1A 4FK5B 1BKEA 1E7IA 2Z8IA 2OZBB 1O9XA 2CKXA 3M99C 3A73A 2XVVA 1HK3A 1HA2A 4W4UB 4K2CA 3JQZA 4DHXB 2XW0A 4N3ZA 4ZBQA 2NQOA 4F5TA 4LB2A 3ICXA 3SIVB 4PO0A 1HK5A 1LOTA 3V03A 4TQ1A 3NVKA 3GQXA 4F5SA 5D7GA 3CX9A 4FJCB 4GDLB 2BXKA 5GIOA 1BM0A 2NNWA 3W1SA 4S1YA 2OT3A 2BX8A 1MA9A 4F5UA 3FNMA 1KW2A 2YDFA 4J2VA 4L9QA 1HK2A 3H37A 4OTTA 2LOQA 3G9KD 5IIUA 4N0UD 3B9LA 3GQUA 2BXGA 4F5VA 5DQFA 4ZUXV 4ZBRA 4E99A 3SQJA 2Z8JA 1VFIA 2BXOA 1H5WA 1J7EA 1N5UA 1J78A 1MIWA 2AJEA 3WHQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2I30 A;  4G03 A;  4OT2 A;  2VUF A;  1BJ5 A;  2XVU A;  1E7E A;  2BXH A;  3JRY A;  3LU8 A;  2XVW A;  1TF0 A;  3UIV A;  1UOR A;  1GNI A;  2XSI A;  5IJ5 A;  5ID9 A;  5IIX A;  4IW1 A;  2BXB A;  4N0F D;  5GHK A;  4EMX A;  4LUF A;  2BXL A;  5IFO A;  5FUO A;  5ID7 A;  2VDB A;  4G04 A;  1E7C A;  1GNJ A;  2VUE A;  2I2Z A;  3V08 A;  2XVQ A;  4LB9 A;  5IJE A;  4HGK A;  4L9K A;  4HGM B;  1E7B A;  1E78 A;  2BXN A;  2BXQ A;  2BXD A;  3LU6 A;  4IW2 A;  4BKE A;  5IJF A;  4Z69 A;  1E7G A;  1HK1 A;  1KXP D;  4LUH A;  4L8U A;  2BXA A;  2BXF A;  4JK4 A;  1E7A A;  2BXP A;  3V09 A;  3B9M A;  1E7F A;  5HOZ A;  1H9Z A;  5IIH A;  5DBY A;  2BXC A;  2BXE A;  1AO6 A;  2BXM A;  4LA0 A;  3TDL A;  4OR0 A;  4K71 A;  1HK4 A;  1J7E A;  2BXI A;  2XW1 A;  1BKE A;  1E7I A;  1O9X A;  3A73 A;  2XVV A;  1HK3 A;  1HA2 A;  4K2C A;  3JQZ A;  2XW0 A;  4ZBQ A;  4F5T A;  4LB2 A;  4PO0 A;  1HK5 A;  1LOT A;  3V03 A;  4F5S A;  3CX9 A;  2BXK A;  1BM0 A;  4S1Y A;  2BX8 A;  1MA9 A;  4F5U A;  1KW2 A;  2YDF A;  4J2V A;  4L9Q A;  1HK2 A;  5IIU A;  4N0U D;  3B9L A;  4F5V A;  2BXG A;  5DQF A;  4ZBR A;  4E99 A;  3SQJ A;  2BXO A;  3LU7 A;  1N5U A;  1J78 A;  1E7H A; 
#chains in the Genus database with same CATH topology
 2I30 A;  1MIY A;  4GG2 A;  4G03 A;  4OT2 A;  2VUF A;  1BJ5 A;  4FIP B;  1FOU A;  2EFD A;  3VQI A;  2XVU A;  3WHS A;  1LNS A;  4Z9O A;  5GIN A;  1E7E A;  2EFH A;  4OTU A;  2DYM A;  2QMC A;  1IJG A;  2BXH A;  3PLA A;  2E0Y A;  3JRY A;  3LU8 A;  2XVW A;  3MHS B;  1MUH A;  2LQH A;  1TF0 A;  3LU7 A;  1UOR A;  3UIV A;  2V36 A;  4WA6 B;  4ZCG A;  1GNI A;  2XSI A;  3FWB C;  3H3A A;  5IJ5 A;  2JUH A;  4GDX A;  5ID9 A;  4IW1 A;  5IIX A;  2BXB A;  4N0F D;  4M70 B;  3MHH B;  5GHK A;  4EMX A;  4LUF A;  5B5T A;  4ZBK A;  2DYO A;  2BXL A;  3A75 A;  4MBE C;  5IFO A;  5FUO A;  5ID7 A;  1MM8 A;  2VDB A;  4G04 A;  1E7C A;  4D7X A;  2GUT A;  1GNJ A;  3BPJ A;  2VUE A;  2I2Z A;  3V08 A;  1MIV A;  1KDX A;  2XVQ A;  4LB9 A;  1JNB A;  5IJE A;  4HGK A;  2ROH A;  4L9K A;  4BY9 C;  4HGM B;  2K0N A;  1E7B A;  1E78 A;  2BXN A;  2BXQ A;  2BXD A;  3LU6 A;  4IW2 A;  4BKE A;  5IJF A;  4Z69 A;  1E7G A;  2XMO A;  3KJL A;  1HK1 A;  3WHR A;  1KXP D;  3GA9 L;  4NAW B;  4LUH A;  4L8U A;  2Z8K A;  2BXA A;  2BXF A;  4JK4 A;  1E7A A;  2BXP A;  2EFE A;  1VZS A;  3V09 A;  2LXS A;  3B9M A;  1E7F A;  5HOZ A;  3SIU B;  2DBW A;  3FWC C;  4I9O A;  4ZC6 A;  4TQ0 A;  1H9Z A;  3NVM A;  4G01 A;  2EFC A;  5IIH A;  5GIP A;  5DBY A;  2BXC A;  5BPK A;  2DBX A;  2BXE A;  1AO6 A;  2DG5 A;  3NVI A;  2BXM A;  4LA0 A;  1TXU A;  2E0X A;  3KIK A;  3TDL A;  2DBU A;  2KBZ A;  4OR0 A;  3NMU A;  4C31 B;  1NT2 B;  4GDK B;  1E7H A;  4K71 A;  2LXT A;  2QM6 A;  2QHB A;  1HK4 A;  2BXI A;  2XW1 A;  4FK5 B;  1BKE A;  1E7I A;  2Z8I A;  2AGH B;  2OZB B;  1O9X A;  2CKX A;  3M99 C;  3A73 A;  2XVV A;  1HK3 A;  1HA2 A;  4W4U B;  4K2C A;  3JQZ A;  4DHX B;  4DM0 A;  2XW0 A;  4N3Z A;  4ZBQ A;  2NQO A;  4F5T A;  4LB2 A;  3ICX A;  3SIV B;  4PO0 A;  1HK5 A;  1LOT A;  3V03 A;  2KWF A;  4TQ1 A;  3NVK A;  3GQX A;  1MUS A;  4F5S A;  5D7G A;  3CX9 A;  4FJC B;  4GDL B;  1SB0 A;  2BXK A;  5GIO A;  1BM0 A;  2NNW A;  3W1S A;  2LQI A;  4S1Y A;  2OT3 A;  2BX8 A;  1MA9 A;  4F5U A;  3FNM A;  1KW2 A;  2YDF A;  4J2V A;  4L9Q A;  1HK2 A;  3ECP A;  3H37 A;  4OTT A;  2LOQ A;  3G9K D;  5IIU A;  4N0U D;  3B9L A;  3GQU A;  2BXG A;  4F5V A;  5DQF A;  4ZUX V;  4ZBR A;  4E99 A;  3SQJ A;  2Z8J A;  1VFI A;  2BXO A;  1H5W A;  1J7E A;  1N5U A;  1J78 A;  1MIW A;  2AJE A;  3WHQ A; 
#chains in the Genus database with same CATH homology
 2I30 A;  1MIY A;  4GG2 A;  4G03 A;  4OT2 A;  2VUF A;  1BJ5 A;  4FIP B;  1FOU A;  2EFD A;  3VQI A;  2XVU A;  3WHS A;  1LNS A;  4Z9O A;  5GIN A;  1E7E A;  2EFH A;  4OTU A;  2DYM A;  2QMC A;  1IJG A;  2BXH A;  3PLA A;  2E0Y A;  3JRY A;  3LU8 A;  2XVW A;  3MHS B;  1TF0 A;  3LU7 A;  1UOR A;  3UIV A;  2V36 A;  4WA6 B;  4ZCG A;  1GNI A;  2XSI A;  3FWB C;  3H3A A;  5IJ5 A;  2JUH A;  4GDX A;  5ID9 A;  4IW1 A;  5IIX A;  2BXB A;  4N0F D;  4M70 B;  3MHH B;  5GHK A;  4EMX A;  4LUF A;  5B5T A;  4ZBK A;  2DYO A;  2BXL A;  3A75 A;  4MBE C;  5IFO A;  5FUO A;  5ID7 A;  2VDB A;  4G04 A;  1E7C A;  1GNJ A;  2VUE A;  2I2Z A;  3V08 A;  1MIV A;  2XVQ A;  4LB9 A;  1JNB A;  5IJE A;  4HGK A;  2ROH A;  4L9K A;  4BY9 C;  4HGM B;  1E7B A;  1E78 A;  2BXN A;  2BXQ A;  2BXD A;  3LU6 A;  4IW2 A;  4BKE A;  5IJF A;  4Z69 A;  1E7G A;  2XMO A;  3KJL A;  1HK1 A;  3WHR A;  1KXP D;  3GA9 L;  4NAW B;  4LUH A;  4L8U A;  2Z8K A;  2BXA A;  2BXF A;  4JK4 A;  1E7A A;  2BXP A;  2EFE A;  1VZS A;  3V09 A;  3B9M A;  1E7F A;  5HOZ A;  3SIU B;  2DBW A;  3FWC C;  4ZC6 A;  4TQ0 A;  1H9Z A;  3NVM A;  4G01 A;  2EFC A;  5IIH A;  5GIP A;  5DBY A;  2BXC A;  5BPK A;  2DBX A;  2BXE A;  1AO6 A;  2DG5 A;  3NVI A;  2BXM A;  4LA0 A;  1TXU A;  2E0X A;  3KIK A;  3TDL A;  2DBU A;  2KBZ A;  4OR0 A;  3NMU A;  4C31 B;  1NT2 B;  4GDK B;  1E7H A;  4K71 A;  2QM6 A;  2QHB A;  1HK4 A;  2BXI A;  2XW1 A;  4FK5 B;  1BKE A;  1E7I A;  2Z8I A;  2OZB B;  1O9X A;  2CKX A;  3M99 C;  3A73 A;  2XVV A;  1HK3 A;  1HA2 A;  4W4U B;  4K2C A;  3JQZ A;  4DHX B;  2XW0 A;  4N3Z A;  4ZBQ A;  2NQO A;  4F5T A;  4LB2 A;  3ICX A;  3SIV B;  4PO0 A;  1HK5 A;  1LOT A;  3V03 A;  4TQ1 A;  3NVK A;  3GQX A;  4F5S A;  5D7G A;  3CX9 A;  4FJC B;  4GDL B;  2BXK A;  5GIO A;  1BM0 A;  2NNW A;  3W1S A;  4S1Y A;  2OT3 A;  2BX8 A;  1MA9 A;  4F5U A;  3FNM A;  1KW2 A;  2YDF A;  4J2V A;  4L9Q A;  1HK2 A;  3H37 A;  4OTT A;  2LOQ A;  3G9K D;  5IIU A;  4N0U D;  3B9L A;  3GQU A;  2BXG A;  4F5V A;  5DQF A;  4ZUX V;  4ZBR A;  4E99 A;  3SQJ A;  2Z8J A;  1VFI A;  2BXO A;  1H5W A;  1J7E A;  1N5U A;  1J78 A;  1MIW A;  2AJE A;  3WHQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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