3B9MA

Human serum albumin complexed with myristate, 3'-azido-3'-deoxythymidine (azt) and salicylic acid
Total Genus 217
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
217
sequence length
582
structure length
582
Chain Sequence
HKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Lipid binding protein
molecule keywords Serum albumin
publication title A new drug binding subsite on human serum albumin and drug-drug interaction studied by X-ray crystallography
pubmed doi rcsb
total genus 217
structure length 582
sequence length 582
ec nomenclature
pdb deposition date 2007-11-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3b9mA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3b9mA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3b9mA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3b9mA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3b9mA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3b9mA05
4N0UD 4J2VA 4IW1A 4LB2A 5IIUA 2BXEA 2BXHA 3CX9A 4E99A 4F5VA 1HK3A 1HK5A 2I2ZA 4LUFA 2BXKA 1HA2A 4F5TA 4ZBRA 4F5UA 2XSIA 4L8UA 4L9KA 4K71A 4OR0A 1E78A 4BKEA 1BKEA 2YDFA 4F5SA 1J7EA 4LB9A 4HGMB 1E7EA 1GNIA 1E7BA 4N0FD 3LU7A 3B9LA 1AO6A 1E7AA 5FUOA 5IJEA 2BX8A 2XVQA 2BXDA 3V03A 2XW0A 2I30A 2BXFA 4HGKA 1BJ5A 2XVVA 3A73A 5ID9A 2VDBA 1E7IA 1KW2A 2BXOA 1J78A 2BXIA 5GHKA 2VUEA 1E7HA 1HK4A 2BXGA 2XW1A 4K2CA 4Z69A 1MA9A 3SQJA 1TF0A 1E7GA 5DQFA 5DBYA 5ID7A 5IJFA 1GNJA 3LU8A 3TDLA 3JQZA 2XVWA 1H9ZA 2BXLA 1BM0A 2BXNA 4G03A 2XVUA 4LUHA 1E7CA 4EMXA 1KXPD 5IFOA 4S1YA 3B9MA 1UORA 1HK2A 1LOTA 4IW2A 4ZBQA 3UIVA 3LU6A 4JK4A 2BXAA 5IJ5A 2VUFA 2BXMA 4OT2A 2BXCA 1N5UA 3JRYA 4PO0A 2BXBA 1O9XA 3V09A 2BXPA 5IIHA 4G04A 1E7FA 3V08A 5IIXA 5HOZA 4LA0A 1HK1A 4L9QA 2BXQA
chains in the Genus database with same CATH superfamily
4N0UD 2K0NA 3NVMA 4IW1A 4J2VA 1NT2B 2V36A 3FWCC 4LB2A 4WA6B 5IIUA 3W1SA 4I9OA 4BY9C 1MIWA 2BXEA 2BXHA 3MHHB 3CX9A 4E99A 4F5VA 5GIPA 2AGHB 1HK3A 4D7XA 1MIVA 4NAWB 3GQXA 4TQ0A 5B5TA 1HK5A 3NMUA 4OTUA 2I2ZA 2OT3A 4LUFA 5IJFA 2BXKA 3ICXA 2DBXA 2OZBB 1HA2A 2DYMA 4F5TA 2LOQA 4ZBRA 3GA9L 3WHQA 2EFEA 4F5UA 3H37A 2NQOA 2XSIA 4L8UA 4L9KA 4K71A 4OR0A 1E78A 3GQUA 4OTTA 1BKEA 4BKEA 2YDFA 4F5SA 1J7EA 4LB9A 4HGMB 4FJCB 2QMCA 2E0XA 3FNMA 1E7EA 4N3ZA 2Z8JA 1MIYA 2LQHA 1GNIA 1E7BA 4N0FD 3LU7A 3B9LA 1AO6A 1E7AA 2QM6A 5FUOA 5IJEA 2BX8A 4W4UB 3NVIA 3KJLA 1KDXA 2XVQA 2BXDA 5BPKA 3V03A 3M99C 2XW0A 2I30A 2BXFA 4HGKA 1BJ5A 2XVVA 3A73A 3FWBC 5D7GA 1MM8A 2EFDA 4FIPB 5ID9A 4GDLB 5GINA 2VDBA 2AJEA 1E7IA 2LXTA 1SB0A 2JUHA 3MHSB 1KW2A 2BXOA 1MUSA 1J78A 2BXIA 1LNSA 4DM0A 4MBEC 5GHKA 3WHRA 1VZSA 2VUEA 1E7HA 1HK4A 2DBWA 2BXGA 3NVKA 2XW1A 4K2CA 3SIVB 4Z69A 1MA9A 3SQJA 1TF0A 1E7GA 5DQFA 5DBYA 1H5WA 5ID7A 4GG2A 1IJGA 2KWFA 1GNJA 3LU8A 4GDKB 3TDLA 3JQZA 2XVWA 1H9ZA 2BXLA 1BM0A 2BXNA 2GUTA 4G03A 2QHBA 2XVUA 2EFCA 3H3AA 4LUHA 1E7CA 4TQ1A 1KXPD 5IFOA 4EMXA 2LQIA 4S1YA 3B9MA 1UORA 2EFHA 2ROHA 1FOUA 4G01A 2DG5A 2KBZA 2XMOA 1HK2A 3G9KD 2DYOA 2CKXA 4M70B 1LOTA 4IW2A 4ZBQA 3UIVA 3LU6A 4JK4A 4C31B 2BXAA 5IJ5A 2VUFA 2BXMA 1VFIA 2DBUA 4Z9OA 4OT2A 2BXCA 2Z8KA 3VQIA 3PLAA 1N5UA 2NNWA 3JRYA 4GDXA 4PO0A 2BXBA 5GIOA 4ZUXV 3A75A 3BPJA 1O9XA 3V09A 2BXPA 5IIHA 4G04A 3WHSA 2Z8IA 1E7FA 4ZBKA 3V08A 4DHXB 5IIXA 5HOZA 1MUHA 2LXSA 2E0YA 4LA0A 1HK1A 4L9QA 1TXUA 3SIUB 4ZCGA 2BXQA 1JNBA 4ZC6A 3KIKA 4FK5B 3ECPA
chains in the Genus database with same CATH topology
4N0UD 3NVMA 4IW1A 4J2VA 4LB2A 1NT2B 2V36A 3FWCC 4WA6B 5IIUA 3W1SA 4BY9C 1MIWA 2BXEA 2BXHA 3MHHB 3CX9A 4E99A 4F5VA 5GIPA 4TQ0A 1HK3A 1MIVA 4NAWB 3GQXA 5B5TA 1HK5A 3NMUA 4OTUA 2I2ZA 2OT3A 4LUFA 2BXKA 3ICXA 2DBXA 2OZBB 1HA2A 2DYMA 4F5TA 2LOQA 4ZBRA 3GA9L 3WHQA 2EFEA 4F5UA 3H37A 2NQOA 2XSIA 4L8UA 4L9KA 4K71A 4OR0A 1E78A 3GQUA 4OTTA 1BKEA 4BKEA 2YDFA 4F5SA 1J7EA 4LB9A 4HGMB 4FJCB 2QMCA 2E0XA 3FNMA 1E7EA 4N3ZA 2Z8JA 1MIYA 1GNIA 1E7BA 4N0FD 3LU7A 3B9LA 1AO6A 1E7AA 2QM6A 5FUOA 5IJEA 2BX8A 4W4UB 3NVIA 3KJLA 2XVQA 2BXDA 5BPKA 3V03A 3M99C 2XW0A 2I30A 2BXFA 4HGKA 1BJ5A 2XVVA 3A73A 3FWBC 5D7GA 2EFDA 4FIPB 5ID9A 4GDLB 5GINA 2VDBA 2AJEA 1E7IA 2JUHA 3MHSB 1KW2A 2BXOA 1J78A 2BXIA 1LNSA 4MBEC 5GHKA 3WHRA 1VZSA 2VUEA 1E7HA 1HK4A 2DBWA 2BXGA 3NVKA 2XW1A 4K2CA 3SIVB 4Z69A 1MA9A 3SQJA 1TF0A 1E7GA 5DQFA 5DBYA 1H5WA 5ID7A 4GG2A 1IJGA 5IJFA 1GNJA 3LU8A 4GDKB 3TDLA 3JQZA 2XVWA 1H9ZA 2BXLA 1BM0A 2BXNA 4G03A 2QHBA 2XVUA 2EFCA 3H3AA 4LUHA 1E7CA 4TQ1A 1KXPD 5IFOA 4EMXA 4S1YA 3B9MA 1UORA 2EFHA 2ROHA 1FOUA 4G01A 2DG5A 2KBZA 2XMOA 1HK2A 3G9KD 2DYOA 2CKXA 4M70B 1LOTA 4IW2A 4ZBQA 3UIVA 3LU6A 4JK4A 4C31B 2BXAA 5IJ5A 2VUFA 2BXMA 1VFIA 2DBUA 4Z9OA 4OT2A 2BXCA 2Z8KA 3VQIA 3PLAA 1N5UA 2NNWA 3JRYA 4GDXA 4PO0A 2BXBA 5GIOA 4ZUXV 3A75A 1O9XA 3V09A 2BXPA 5IIHA 4G04A 3WHSA 2Z8IA 1E7FA 4ZBKA 3V08A 4DHXB 5IIXA 5HOZA 2E0YA 4LA0A 1HK1A 4L9QA 1TXUA 3SIUB 4ZCGA 2BXQA 1JNBA 4ZC6A 3KIKA 4FK5B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4N0U D;  4J2V A;  4IW1 A;  4LB2 A;  5IIU A;  2BXE A;  2BXH A;  3CX9 A;  4E99 A;  4F5V A;  1HK3 A;  1HK5 A;  2I2Z A;  4LUF A;  2BXK A;  1HA2 A;  4F5T A;  4ZBR A;  4F5U A;  2XSI A;  4L8U A;  4L9K A;  4K71 A;  4OR0 A;  1E78 A;  4BKE A;  1BKE A;  2YDF A;  4F5S A;  1J7E A;  4LB9 A;  4HGM B;  1E7E A;  1GNI A;  1E7B A;  4N0F D;  3LU7 A;  3B9L A;  1AO6 A;  1E7A A;  5FUO A;  5IJE A;  2BX8 A;  2XVQ A;  2BXD A;  3V03 A;  2XW0 A;  2I30 A;  2BXF A;  4HGK A;  1BJ5 A;  2XVV A;  3A73 A;  5ID9 A;  2VDB A;  1E7I A;  1KW2 A;  2BXO A;  1J78 A;  2BXI A;  5GHK A;  2VUE A;  1E7H A;  1HK4 A;  2BXG A;  2XW1 A;  4K2C A;  4Z69 A;  1MA9 A;  3SQJ A;  1TF0 A;  1E7G A;  5DQF A;  5DBY A;  5ID7 A;  5IJF A;  1GNJ A;  3LU8 A;  3TDL A;  3JQZ A;  2XVW A;  1H9Z A;  2BXL A;  1BM0 A;  2BXN A;  4G03 A;  2XVU A;  4LUH A;  1E7C A;  4EMX A;  1KXP D;  5IFO A;  4S1Y A;  3B9M A;  1UOR A;  1HK2 A;  1LOT A;  4IW2 A;  4ZBQ A;  3UIV A;  3LU6 A;  4JK4 A;  2BXA A;  5IJ5 A;  2VUF A;  2BXM A;  4OT2 A;  2BXC A;  1N5U A;  3JRY A;  4PO0 A;  2BXB A;  1O9X A;  3V09 A;  2BXP A;  5IIH A;  4G04 A;  1E7F A;  3V08 A;  5IIX A;  5HOZ A;  4LA0 A;  1HK1 A;  4L9Q A;  2BXQ A; 
#chains in the Genus database with same CATH topology
 4N0U D;  2K0N A;  3NVM A;  4IW1 A;  4J2V A;  1NT2 B;  2V36 A;  3FWC C;  4LB2 A;  4WA6 B;  5IIU A;  3W1S A;  4I9O A;  4BY9 C;  1MIW A;  2BXE A;  2BXH A;  3MHH B;  3CX9 A;  4E99 A;  4F5V A;  5GIP A;  2AGH B;  1HK3 A;  4D7X A;  1MIV A;  4NAW B;  3GQX A;  4TQ0 A;  5B5T A;  1HK5 A;  3NMU A;  4OTU A;  2I2Z A;  2OT3 A;  4LUF A;  5IJF A;  2BXK A;  3ICX A;  2DBX A;  2OZB B;  1HA2 A;  2DYM A;  4F5T A;  2LOQ A;  4ZBR A;  3GA9 L;  3WHQ A;  2EFE A;  4F5U A;  3H37 A;  2NQO A;  2XSI A;  4L8U A;  4L9K A;  4K71 A;  4OR0 A;  1E78 A;  3GQU A;  4OTT A;  1BKE A;  4BKE A;  2YDF A;  4F5S A;  1J7E A;  4LB9 A;  4HGM B;  4FJC B;  2QMC A;  2E0X A;  3FNM A;  1E7E A;  4N3Z A;  2Z8J A;  1MIY A;  2LQH A;  1GNI A;  1E7B A;  4N0F D;  3LU7 A;  3B9L A;  1AO6 A;  1E7A A;  2QM6 A;  5FUO A;  5IJE A;  2BX8 A;  4W4U B;  3NVI A;  3KJL A;  1KDX A;  2XVQ A;  2BXD A;  5BPK A;  3V03 A;  3M99 C;  2XW0 A;  2I30 A;  2BXF A;  4HGK A;  1BJ5 A;  2XVV A;  3A73 A;  3FWB C;  5D7G A;  1MM8 A;  2EFD A;  4FIP B;  5ID9 A;  4GDL B;  5GIN A;  2VDB A;  2AJE A;  1E7I A;  2LXT A;  1SB0 A;  2JUH A;  3MHS B;  1KW2 A;  2BXO A;  1MUS A;  1J78 A;  2BXI A;  1LNS A;  4DM0 A;  4MBE C;  5GHK A;  3WHR A;  1VZS A;  2VUE A;  1E7H A;  1HK4 A;  2DBW A;  2BXG A;  3NVK A;  2XW1 A;  4K2C A;  3SIV B;  4Z69 A;  1MA9 A;  3SQJ A;  1TF0 A;  1E7G A;  5DQF A;  5DBY A;  1H5W A;  5ID7 A;  4GG2 A;  1IJG A;  2KWF A;  1GNJ A;  3LU8 A;  4GDK B;  3TDL A;  3JQZ A;  2XVW A;  1H9Z A;  2BXL A;  1BM0 A;  2BXN A;  2GUT A;  4G03 A;  2QHB A;  2XVU A;  2EFC A;  3H3A A;  4LUH A;  1E7C A;  4TQ1 A;  1KXP D;  5IFO A;  4EMX A;  2LQI A;  4S1Y A;  3B9M A;  1UOR A;  2EFH A;  2ROH A;  1FOU A;  4G01 A;  2DG5 A;  2KBZ A;  2XMO A;  1HK2 A;  3G9K D;  2DYO A;  2CKX A;  4M70 B;  1LOT A;  4IW2 A;  4ZBQ A;  3UIV A;  3LU6 A;  4JK4 A;  4C31 B;  2BXA A;  5IJ5 A;  2VUF A;  2BXM A;  1VFI A;  2DBU A;  4Z9O A;  4OT2 A;  2BXC A;  2Z8K A;  3VQI A;  3PLA A;  1N5U A;  2NNW A;  3JRY A;  4GDX A;  4PO0 A;  2BXB A;  5GIO A;  4ZUX V;  3A75 A;  3BPJ A;  1O9X A;  3V09 A;  2BXP A;  5IIH A;  4G04 A;  3WHS A;  2Z8I A;  1E7F A;  4ZBK A;  3V08 A;  4DHX B;  5IIX A;  5HOZ A;  1MUH A;  2LXS A;  2E0Y A;  4LA0 A;  1HK1 A;  4L9Q A;  1TXU A;  3SIU B;  4ZCG A;  2BXQ A;  1JNB A;  4ZC6 A;  3KIK A;  4FK5 B;  3ECP A; 
#chains in the Genus database with same CATH homology
 4N0U D;  3NVM A;  4IW1 A;  4J2V A;  4LB2 A;  1NT2 B;  2V36 A;  3FWC C;  4WA6 B;  5IIU A;  3W1S A;  4BY9 C;  1MIW A;  2BXE A;  2BXH A;  3MHH B;  3CX9 A;  4E99 A;  4F5V A;  5GIP A;  4TQ0 A;  1HK3 A;  1MIV A;  4NAW B;  3GQX A;  5B5T A;  1HK5 A;  3NMU A;  4OTU A;  2I2Z A;  2OT3 A;  4LUF A;  2BXK A;  3ICX A;  2DBX A;  2OZB B;  1HA2 A;  2DYM A;  4F5T A;  2LOQ A;  4ZBR A;  3GA9 L;  3WHQ A;  2EFE A;  4F5U A;  3H37 A;  2NQO A;  2XSI A;  4L8U A;  4L9K A;  4K71 A;  4OR0 A;  1E78 A;  3GQU A;  4OTT A;  1BKE A;  4BKE A;  2YDF A;  4F5S A;  1J7E A;  4LB9 A;  4HGM B;  4FJC B;  2QMC A;  2E0X A;  3FNM A;  1E7E A;  4N3Z A;  2Z8J A;  1MIY A;  1GNI A;  1E7B A;  4N0F D;  3LU7 A;  3B9L A;  1AO6 A;  1E7A A;  2QM6 A;  5FUO A;  5IJE A;  2BX8 A;  4W4U B;  3NVI A;  3KJL A;  2XVQ A;  2BXD A;  5BPK A;  3V03 A;  3M99 C;  2XW0 A;  2I30 A;  2BXF A;  4HGK A;  1BJ5 A;  2XVV A;  3A73 A;  3FWB C;  5D7G A;  2EFD A;  4FIP B;  5ID9 A;  4GDL B;  5GIN A;  2VDB A;  2AJE A;  1E7I A;  2JUH A;  3MHS B;  1KW2 A;  2BXO A;  1J78 A;  2BXI A;  1LNS A;  4MBE C;  5GHK A;  3WHR A;  1VZS A;  2VUE A;  1E7H A;  1HK4 A;  2DBW A;  2BXG A;  3NVK A;  2XW1 A;  4K2C A;  3SIV B;  4Z69 A;  1MA9 A;  3SQJ A;  1TF0 A;  1E7G A;  5DQF A;  5DBY A;  1H5W A;  5ID7 A;  4GG2 A;  1IJG A;  5IJF A;  1GNJ A;  3LU8 A;  4GDK B;  3TDL A;  3JQZ A;  2XVW A;  1H9Z A;  2BXL A;  1BM0 A;  2BXN A;  4G03 A;  2QHB A;  2XVU A;  2EFC A;  3H3A A;  4LUH A;  1E7C A;  4TQ1 A;  1KXP D;  5IFO A;  4EMX A;  4S1Y A;  3B9M A;  1UOR A;  2EFH A;  2ROH A;  1FOU A;  4G01 A;  2DG5 A;  2KBZ A;  2XMO A;  1HK2 A;  3G9K D;  2DYO A;  2CKX A;  4M70 B;  1LOT A;  4IW2 A;  4ZBQ A;  3UIV A;  3LU6 A;  4JK4 A;  4C31 B;  2BXA A;  5IJ5 A;  2VUF A;  2BXM A;  1VFI A;  2DBU A;  4Z9O A;  4OT2 A;  2BXC A;  2Z8K A;  3VQI A;  3PLA A;  1N5U A;  2NNW A;  3JRY A;  4GDX A;  4PO0 A;  2BXB A;  5GIO A;  4ZUX V;  3A75 A;  1O9X A;  3V09 A;  2BXP A;  5IIH A;  4G04 A;  3WHS A;  2Z8I A;  1E7F A;  4ZBK A;  3V08 A;  4DHX B;  5IIX A;  5HOZ A;  2E0Y A;  4LA0 A;  1HK1 A;  4L9Q A;  1TXU A;  3SIU B;  4ZCG A;  2BXQ A;  1JNB A;  4ZC6 A;  3KIK A;  4FK5 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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