2E0YA

Crystal structure of the samarium derivative of mature gamma-glutamyltranspeptidase from escherichia coli
Total Genus 96
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
96
sequence length
359
structure length
359
Chain Sequence
APPVSYGVEEDVFHPVRAKQGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSKNGNTTAIDFREMAPAKATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVLPNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPISGDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDPDFVKVPWQALTNKAYAKSIADQIDINKAKPSSEIRPGKLAPYE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Gamma-glutamyltranspeptidase
publication title Crystal structure of the gamma-glutamyltranspeptidase precursor protein from Escherichia coli. Structural changes upon autocatalytic processing and implications for the maturation mechanism
pubmed doi rcsb
source organism Escherichia coli k12
total genus 96
structure length 359
sequence length 359
chains with identical sequence C
ec nomenclature ec 2.3.2.2: Gamma-glutamyltransferase.
pdb deposition date 2006-10-16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.130 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2e0yA02
3FNMA 4OTUA 2QMCA 4ZC6A 3WHQA 4ZCGA 2DG5A 2DBUA 2DBWA 2NQOA 2Z8KA 4GDXA 2E0XA 4GG2A 2QM6A 4OTTA 2E0YA 3A75A 2Z8IA 2V36A 4Z9OA 3WHSA 5BPKA 4ZBKA 5B5TA 2Z8JA 2DBXA 3WHRA
chains in the Genus database with same CATH superfamily
4WA6B 1N5UA 1VFIA 3FNMA 1KDXA 1E7IA 5IJFA 1HK3A 2EFCA 5IIHA 3SQJA 4JK4A 3SIVB 4N3ZA 3FWCC 1MM8A 4GDKB 2Z8KA 2E0XA 4GDLB 1MIYA 1NT2B 3BPJA 4IW2A 2LQHA 3A75A 2V36A 3GQUA 4Z9OA 2ROHA 3NVKA 2XVWA 1IJGA 1BJ5A 1TXUA 2I30A 2LXTA 4OR0A 4EMXA 3G9KD 2XVUA 4F5UA 1MUSA 4K2CA 2BXQA 2BXPA 4FJCB 4E99A 1E7CA 4HGMB 1LNSA 5IJ5A 2BXHA 2NNWA 2KBZA 4HGKA 4F5TA 2XVQA 3JRYA 4K71A 3GA9L 4MBEC 3ECPA 3UIVA 3FWBC 2OZBB 1HK4A 4M70B 4DM0A 4ZC6A 2K0NA 3LU7A 2OT3A 4Z69A 4NAWB 4BY9C 2XW1A 3KJLA 3KIKA 4OT2A 4BKEA 1E7FA 2DBWA 3SIUB 5ID7A 5GINA 4IW1A 4LB9A 1E7EA 2XVVA 1KW2A 2BXCA 2LOQA 2BXMA 2BXIA 2XW0A 4GG2A 1LOTA 2EFEA 2QM6A 4D7XA 2XMOA 2E0YA 5ID9A 2I2ZA 5GIPA 2AGHB 3A73A 5IJEA 1MIVA 4S1YA 2BXKA 4L9QA 1HK2A 2BXAA 1E7GA 2KWFA 5B5TA 2AJEA 4ZBQA 4F5SA 2CKXA 2VDBA 4L8UA 4LUFA 3VQIA 3CX9A 4ZUXV 4FK5B 2BXNA 2LXSA 3MHHB 1HK5A 4OTUA 2QMCA 5D7GA 2BXGA 3V08A 5IIUA 1MA9A 1UORA 3LU8A 3V03A 3LU6A 4G03A 5HOZA 4N0UD 1HK1A 2YDFA 4C31B 1BM0A 1KXPD 3PLAA 4TQ1A 4ZBRA 2Z8IA 3NVIA 3JQZA 3H37A 2LQIA 4I9OA 2BXEA 3WHSA 1J78A 4ZBKA 3ICXA 3MHSB 3B9MA 1GNJA 1E7HA 2Z8JA 2BXOA 2VUFA 2XSIA 1AO6A 2QHBA 5IIXA 5GHKA 2DYOA 3B9LA 2BXBA 4LA0A 4TQ0A 4F5VA 4L9KA 1E7AA 4PO0A 1SB0A 3H3AA 3WHQA 4ZCGA 2DG5A 4W4UB 2VUEA 5DQFA 2DBUA 1MUHA 1HA2A 1J7EA 2NQOA 2BXFA 4G01A 3V09A 5DBYA 4GDXA 2EFDA 4LUHA 1JNBA 4OTTA 5IFOA 2EFHA 2BXLA 3NMUA 1TF0A 2JUHA 1BKEA 1E78A 2DYMA 5FUOA 5GIOA 4G04A 5BPKA 1H5WA 4LB2A 3NVMA 4J2VA 1GNIA 2GUTA 1FOUA 1H9ZA 3M99C 4N0FD 1MIWA 3W1SA 4FIPB 4DHXB 2BXDA 2DBXA 3GQXA 1O9XA 3WHRA 3TDLA 1E7BA 1VZSA 2BX8A
chains in the Genus database with same CATH topology
4WA6B 1N5UA 1VFIA 3FNMA 1E7IA 5IJFA 1HK3A 2EFCA 5IIHA 3SQJA 4JK4A 3SIVB 4N3ZA 3FWCC 4GDKB 2Z8KA 2E0XA 4GDLB 1MIYA 1NT2B 4IW2A 3A75A 3GQUA 2V36A 4Z9OA 2ROHA 3NVKA 2XVWA 1IJGA 1BJ5A 1TXUA 2I30A 4OR0A 4EMXA 4F5UA 3G9KD 2XVUA 4K2CA 2BXQA 2BXPA 4FJCB 4E99A 1E7CA 4HGMB 1LNSA 5IJ5A 2BXHA 2NNWA 2KBZA 4HGKA 4F5TA 2XVQA 3JRYA 4K71A 3GA9L 4MBEC 3UIVA 3FWBC 2OZBB 1HK4A 4M70B 4ZC6A 3LU7A 4Z69A 2OT3A 4BY9C 4NAWB 2XW1A 3KJLA 3KIKA 4OT2A 4BKEA 1E7FA 2DBWA 3SIUB 5ID7A 5GINA 4IW1A 4LB9A 1E7EA 2XVVA 1KW2A 2BXCA 2LOQA 2BXMA 2BXIA 2XW0A 4GG2A 1LOTA 2EFEA 2QM6A 5ID9A 2XMOA 2E0YA 2I2ZA 5GIPA 3A73A 5IJEA 1MIVA 4S1YA 2BXKA 4L9QA 1HK2A 2BXAA 1E7GA 5B5TA 2AJEA 4ZBQA 4F5SA 2CKXA 2VDBA 4L8UA 4LUFA 3VQIA 3CX9A 4ZUXV 4FK5B 2BXNA 3MHHB 1HK5A 4OTUA 2QMCA 5D7GA 2BXGA 3V08A 5IIUA 1MA9A 1UORA 3LU8A 3V03A 3LU6A 4G03A 5HOZA 4N0UD 1HK1A 2YDFA 4C31B 1BM0A 1KXPD 3PLAA 4TQ1A 4ZBRA 2Z8IA 3NVIA 3JQZA 3H37A 2BXEA 3WHSA 1J78A 4ZBKA 3ICXA 3MHSB 3B9MA 1GNJA 1E7HA 2Z8JA 2BXOA 2VUFA 2XSIA 1AO6A 2QHBA 5IIXA 5GHKA 2DYOA 3B9LA 2BXBA 4LA0A 4TQ0A 4F5VA 4L9KA 1E7AA 4PO0A 3H3AA 3WHQA 4ZCGA 2DG5A 4W4UB 2VUEA 5DQFA 2DBUA 1HA2A 1J7EA 2NQOA 2BXFA 4G01A 3V09A 5DBYA 4GDXA 2EFDA 4LUHA 1JNBA 4OTTA 5IFOA 2EFHA 2BXLA 3NMUA 1TF0A 2JUHA 1BKEA 1E78A 2DYMA 5FUOA 5GIOA 4G04A 5BPKA 1H5WA 4LB2A 3NVMA 4J2VA 1GNIA 3M99C 1FOUA 1H9ZA 4N0FD 1MIWA 3W1SA 4FIPB 4DHXB 2BXDA 2DBXA 3GQXA 1O9XA 3WHRA 3TDLA 1E7BA 1VZSA 2BX8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FNM A;  4OTU A;  2QMC A;  4ZC6 A;  3WHQ A;  4ZCG A;  2DG5 A;  2DBU A;  2DBW A;  2NQO A;  2Z8K A;  4GDX A;  2E0X A;  4GG2 A;  2QM6 A;  4OTT A;  2E0Y A;  3A75 A;  2Z8I A;  2V36 A;  4Z9O A;  3WHS A;  5BPK A;  4ZBK A;  5B5T A;  2Z8J A;  2DBX A;  3WHR A; 
#chains in the Genus database with same CATH topology
 4WA6 B;  1N5U A;  1VFI A;  3FNM A;  1KDX A;  1E7I A;  5IJF A;  1HK3 A;  2EFC A;  5IIH A;  3SQJ A;  4JK4 A;  3SIV B;  4N3Z A;  3FWC C;  1MM8 A;  4GDK B;  2Z8K A;  2E0X A;  4GDL B;  1MIY A;  1NT2 B;  3BPJ A;  4IW2 A;  2LQH A;  3A75 A;  2V36 A;  3GQU A;  4Z9O A;  2ROH A;  3NVK A;  2XVW A;  1IJG A;  1BJ5 A;  1TXU A;  2I30 A;  2LXT A;  4OR0 A;  4EMX A;  3G9K D;  2XVU A;  4F5U A;  1MUS A;  4K2C A;  2BXQ A;  2BXP A;  4FJC B;  4E99 A;  1E7C A;  4HGM B;  1LNS A;  5IJ5 A;  2BXH A;  2NNW A;  2KBZ A;  4HGK A;  4F5T A;  2XVQ A;  3JRY A;  4K71 A;  3GA9 L;  4MBE C;  3ECP A;  3UIV A;  3FWB C;  2OZB B;  1HK4 A;  4M70 B;  4DM0 A;  4ZC6 A;  2K0N A;  3LU7 A;  2OT3 A;  4Z69 A;  4NAW B;  4BY9 C;  2XW1 A;  3KJL A;  3KIK A;  4OT2 A;  4BKE A;  1E7F A;  2DBW A;  3SIU B;  5ID7 A;  5GIN A;  4IW1 A;  4LB9 A;  1E7E A;  2XVV A;  1KW2 A;  2BXC A;  2LOQ A;  2BXM A;  2BXI A;  2XW0 A;  4GG2 A;  1LOT A;  2EFE A;  2QM6 A;  4D7X A;  2XMO A;  2E0Y A;  5ID9 A;  2I2Z A;  5GIP A;  2AGH B;  3A73 A;  5IJE A;  1MIV A;  4S1Y A;  2BXK A;  4L9Q A;  1HK2 A;  2BXA A;  1E7G A;  2KWF A;  5B5T A;  2AJE A;  4ZBQ A;  4F5S A;  2CKX A;  2VDB A;  4L8U A;  4LUF A;  3VQI A;  3CX9 A;  4ZUX V;  4FK5 B;  2BXN A;  2LXS A;  3MHH B;  1HK5 A;  4OTU A;  2QMC A;  5D7G A;  2BXG A;  3V08 A;  5IIU A;  1MA9 A;  1UOR A;  3LU8 A;  3V03 A;  3LU6 A;  4G03 A;  5HOZ A;  4N0U D;  1HK1 A;  2YDF A;  4C31 B;  1BM0 A;  1KXP D;  3PLA A;  4TQ1 A;  4ZBR A;  2Z8I A;  3NVI A;  3JQZ A;  3H37 A;  2LQI A;  4I9O A;  2BXE A;  3WHS A;  1J78 A;  4ZBK A;  3ICX A;  3MHS B;  3B9M A;  1GNJ A;  1E7H A;  2Z8J A;  2BXO A;  2VUF A;  2XSI A;  1AO6 A;  2QHB A;  5IIX A;  5GHK A;  2DYO A;  3B9L A;  2BXB A;  4LA0 A;  4TQ0 A;  4F5V A;  4L9K A;  1E7A A;  4PO0 A;  1SB0 A;  3H3A A;  3WHQ A;  4ZCG A;  2DG5 A;  4W4U B;  2VUE A;  5DQF A;  2DBU A;  1MUH A;  1HA2 A;  1J7E A;  2NQO A;  2BXF A;  4G01 A;  3V09 A;  5DBY A;  4GDX A;  2EFD A;  4LUH A;  1JNB A;  4OTT A;  5IFO A;  2EFH A;  2BXL A;  3NMU A;  1TF0 A;  2JUH A;  1BKE A;  1E78 A;  2DYM A;  5FUO A;  5GIO A;  4G04 A;  5BPK A;  1H5W A;  4LB2 A;  3NVM A;  4J2V A;  1GNI A;  2GUT A;  1FOU A;  1H9Z A;  3M99 C;  4N0F D;  1MIW A;  3W1S A;  4FIP B;  4DHX B;  2BXD A;  2DBX A;  3GQX A;  1O9X A;  3WHR A;  3TDL A;  1E7B A;  1VZS A;  2BX8 A; 
#chains in the Genus database with same CATH homology
 4WA6 B;  1N5U A;  1VFI A;  3FNM A;  1E7I A;  5IJF A;  1HK3 A;  2EFC A;  5IIH A;  3SQJ A;  4JK4 A;  3SIV B;  4N3Z A;  3FWC C;  4GDK B;  2Z8K A;  2E0X A;  4GDL B;  1MIY A;  1NT2 B;  4IW2 A;  3A75 A;  3GQU A;  2V36 A;  4Z9O A;  2ROH A;  3NVK A;  2XVW A;  1IJG A;  1BJ5 A;  1TXU A;  2I30 A;  4OR0 A;  4EMX A;  4F5U A;  3G9K D;  2XVU A;  4K2C A;  2BXQ A;  2BXP A;  4FJC B;  4E99 A;  1E7C A;  4HGM B;  1LNS A;  5IJ5 A;  2BXH A;  2NNW A;  2KBZ A;  4HGK A;  4F5T A;  2XVQ A;  3JRY A;  4K71 A;  3GA9 L;  4MBE C;  3UIV A;  3FWB C;  2OZB B;  1HK4 A;  4M70 B;  4ZC6 A;  3LU7 A;  4Z69 A;  2OT3 A;  4BY9 C;  4NAW B;  2XW1 A;  3KJL A;  3KIK A;  4OT2 A;  4BKE A;  1E7F A;  2DBW A;  3SIU B;  5ID7 A;  5GIN A;  4IW1 A;  4LB9 A;  1E7E A;  2XVV A;  1KW2 A;  2BXC A;  2LOQ A;  2BXM A;  2BXI A;  2XW0 A;  4GG2 A;  1LOT A;  2EFE A;  2QM6 A;  5ID9 A;  2XMO A;  2E0Y A;  2I2Z A;  5GIP A;  3A73 A;  5IJE A;  1MIV A;  4S1Y A;  2BXK A;  4L9Q A;  1HK2 A;  2BXA A;  1E7G A;  5B5T A;  2AJE A;  4ZBQ A;  4F5S A;  2CKX A;  2VDB A;  4L8U A;  4LUF A;  3VQI A;  3CX9 A;  4ZUX V;  4FK5 B;  2BXN A;  3MHH B;  1HK5 A;  4OTU A;  2QMC A;  5D7G A;  2BXG A;  3V08 A;  5IIU A;  1MA9 A;  1UOR A;  3LU8 A;  3V03 A;  3LU6 A;  4G03 A;  5HOZ A;  4N0U D;  1HK1 A;  2YDF A;  4C31 B;  1BM0 A;  1KXP D;  3PLA A;  4TQ1 A;  4ZBR A;  2Z8I A;  3NVI A;  3JQZ A;  3H37 A;  2BXE A;  3WHS A;  1J78 A;  4ZBK A;  3ICX A;  3MHS B;  3B9M A;  1GNJ A;  1E7H A;  2Z8J A;  2BXO A;  2VUF A;  2XSI A;  1AO6 A;  2QHB A;  5IIX A;  5GHK A;  2DYO A;  3B9L A;  2BXB A;  4LA0 A;  4TQ0 A;  4F5V A;  4L9K A;  1E7A A;  4PO0 A;  3H3A A;  3WHQ A;  4ZCG A;  2DG5 A;  4W4U B;  2VUE A;  5DQF A;  2DBU A;  1HA2 A;  1J7E A;  2NQO A;  2BXF A;  4G01 A;  3V09 A;  5DBY A;  4GDX A;  2EFD A;  4LUH A;  1JNB A;  4OTT A;  5IFO A;  2EFH A;  2BXL A;  3NMU A;  1TF0 A;  2JUH A;  1BKE A;  1E78 A;  2DYM A;  5FUO A;  5GIO A;  4G04 A;  5BPK A;  1H5W A;  4LB2 A;  3NVM A;  4J2V A;  1GNI A;  3M99 C;  1FOU A;  1H9Z A;  4N0F D;  1MIW A;  3W1S A;  4FIP B;  4DHX B;  2BXD A;  2DBX A;  3GQX A;  1O9X A;  3WHR A;  3TDL A;  1E7B A;  1VZS A;  2BX8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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