5IIHA

Crystal structure of equine serum albumin in the presence of 2.5 mm zinc at ph 7.4
Total Genus 231
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
231
sequence length
580
structure length
580
Chain Sequence
KSEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAADESAENCDKSLHTLFGDKLCTVATLRATYGELADCCEKQEPERNECFLTHKDDHPNLPKLKPEPDAQCAAFQEDPDKFLGKYLYEVARRHPYFYGPELLFHAEEYKADFTECCPADDKLACLIPKLDALKERILLSSAKERLKCSSFQNFGERAVKAWSVARLSQKFPKADFAEVSKIVTDLTKVHKECCHGDLLECADDRADLAKYICEHQDSISGKLKACCDKPLLQKSHCIAEVKEDDLPSDLPALAADFAEDKEICKHYKDAKDVFLGTFLYEYSRRHPDYSVSLLLRIAKTYEATLEKCCAEADPPACYRTVFDQFTPLVEEPKSLVKKNCDLFEEVGEYDFQNALIVRYTKKAPQVSTPTLVEIGRTLGKVGSRCCKLPESERLPCSENHLALALNRLCVLHEKTPVSEKITKCCTDSLAERRPCFSALELDEGYVPKEFKAETFTFHADICTLPEDEKQIKKQSALAELVKHKPKATKEQLKTVLGNFSAFVAKCCGAEDKEACFAEEGPKLVASSQLALA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Serum albumin
publication title Circulatory zinc transport is controlled by distinct interdomain sites on mammalian albumins.
pubmed doi rcsb
total genus 231
structure length 580
sequence length 580
ec nomenclature
pdb deposition date 2016-03-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5iihA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5iihA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5iihA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5iihA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5iihA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 5iihA05
5IIXA 1HK1A 4EMXA 4LB2A 5IJFA 3B9MA 3V03A 1AO6A 5IJ5A 4OR0A 4E99A 1HK3A 2VUFA 5IFOA 2BXDA 4JK4A 1GNIA 1E7EA 4PO0A 4G03A 4ZBRA 4LUFA 3V09A 2XW0A 2BXGA 4F5SA 5IJEA 1E7FA 3B9LA 1E78A 1UORA 2BX8A 3LU8A 1HK5A 1E7GA 2VUEA 1J78A 2BXBA 2XVWA 2BXKA 2BXHA 4BKEA 4LUHA 2YDFA 4HGMB 1N5UA 2BXAA 4K2CA 5GHKA 4N0UD 2XVVA 1LOTA 4LA0A 2BXEA 5ID9A 3SQJA 2XSIA 1KW2A 2XVUA 2I2ZA 1TF0A 1H9ZA 4J2VA 2VDBA 3JQZA 4Z69A 5DBYA 3TDLA 4G04A 4IW1A 1BJ5A 2BXOA 4HGKA 1E7CA 4L9KA 4ZBQA 1J7EA 3UIVA 2BXFA 4K71A 4L9QA 2I30A 1HK4A 4OT2A 1HA2A 3LU6A 1E7AA 3A73A 1HK2A 1O9XA 3JRYA 1GNJA 4N0FD 1MA9A 2BXIA 1E7IA 2BXCA 4L8UA 5FUOA 1E7HA 1KXPD 4LB9A 3CX9A 4F5TA 3V08A 2BXPA 4F5UA 2XVQA 5HOZA 4IW2A 1BM0A 2BXMA 2XW1A 5DQFA 4F5VA 5IIUA 1E7BA 5IIHA 2BXNA 4S1YA 2BXLA 1BKEA 5ID7A 3LU7A 2BXQA
chains in the Genus database with same CATH superfamily
5IIXA 1HK1A 4EMXA 4LB2A 5IJFA 3B9MA 3NMUA 4G01A 4ZCGA 5IJ5A 4OR0A 3V03A 4E99A 1AO6A 1HK3A 3SIUB 2VUFA 1MIWA 5IFOA 2BXDA 4JK4A 4ZC6A 1GNIA 2K0NA 1E7EA 4PO0A 2GUTA 1SB0A 2Z8IA 4FK5B 2JUHA 4G03A 4ZBRA 4LUFA 3V09A 4GG2A 5GIPA 2KWFA 3PLAA 2LXTA 2XW0A 1TXUA 2BXGA 3M99C 5IIHA 4Z9OA 4F5SA 2V36A 1KDXA 1VZSA 2LOQA 2AJEA 5IJEA 2LQHA 1VFIA 1E7FA 3B9LA 4I9OA 1E78A 1UORA 2BX8A 3WHSA 3LU8A 1HK5A 4WA6B 1E7GA 2VUEA 1J78A 2BXBA 2XVWA 2BXKA 2BXHA 1FOUA 4BKEA 4LUHA 2DBUA 4C31B 2YDFA 2OZBB 2DYMA 2QMCA 2XMOA 1N5UA 2BXAA 4HGMB 4K2CA 5GHKA 4N0UD 2XVVA 3H3AA 2DBXA 1LOTA 4LA0A 2BXEA 5ID9A 3SQJA 4N3ZA 2ROHA 2XSIA 1KW2A 4W4UB 2XVUA 4D7XA 1TF0A 2I2ZA 1H9ZA 2VDBA 3NVMA 4J2VA 4DHXB 2CKXA 3JQZA 4Z69A 1H5WA 1IJGA 5DBYA 3MHSB 3TDLA 3FWCC 4G04A 3VQIA 4GDLB 2QHBA 4IW1A 4BY9C 1BJ5A 5BPKA 2DYOA 3KJLA 1MUHA 2BXOA 2AGHB 2DG5A 1JNBA 4MBEC 4HGKA 2E0XA 1E7CA 4L9KA 4M70B 1J7EA 4ZBQA 5B5TA 3UIVA 3WHQA 2EFEA 3GA9L 3GQUA 2BXFA 4K71A 4ZUXV 4L9QA 4FJCB 2I30A 5D7GA 3G9KD 1HK4A 2LQIA 3FNMA 2EFDA 5GINA 1LNSA 4OT2A 4OTUA 2EFCA 1HA2A 2Z8JA 3LU6A 1E7AA 3GQXA 3A73A 4OTTA 1HK2A 2KBZA 1O9XA 2QM6A 3JRYA 1GNJA 1MUSA 4DM0A 4N0FD 1MA9A 2BXIA 2NQOA 1E7IA 2BXCA 4L8UA 5FUOA 1E7HA 1KXPD 3BPJA 3ECPA 4FIPB 4GDXA 4LB9A 2OT3A 3ICXA 3NVKA 3KIKA 3CX9A 3FWBC 4TQ0A 4F5TA 3V08A 2BXPA 4F5UA 2XVQA 2DBWA 5GIOA 1MM8A 5HOZA 4IW2A 1BM0A 2BXMA 4GDKB 2XW1A 5DQFA 3MHHB 4F5VA 5IIUA 1E7BA 3A75A 2BXNA 3H37A 4S1YA 2BXLA 1BKEA 2LXSA 2Z8KA 1MIVA 4NAWB 4TQ1A 5ID7A 1MIYA 4ZBKA 3LU7A 3W1SA 3NVIA 2NNWA 2EFHA 1NT2B 3WHRA 2E0YA 3SIVB 2BXQA
chains in the Genus database with same CATH topology
5IIXA 1HK1A 4EMXA 4LB2A 5IJFA 3B9MA 3NMUA 4G01A 4ZCGA 5IJ5A 4OR0A 3V03A 4E99A 1AO6A 1HK3A 3SIUB 2VUFA 1MIWA 5IFOA 2BXDA 4JK4A 4ZC6A 1GNIA 1E7EA 4PO0A 2Z8IA 4FK5B 2JUHA 4G03A 4ZBRA 4LUFA 3V09A 4GG2A 5GIPA 3PLAA 2XW0A 1TXUA 2BXGA 3M99C 5IIHA 4Z9OA 4F5SA 2V36A 1VZSA 2LOQA 2AJEA 5IJEA 1VFIA 1E7FA 3B9LA 3WHSA 1E78A 1UORA 2BX8A 3LU8A 1HK5A 4WA6B 1E7GA 2VUEA 1J78A 2BXBA 2XVWA 2BXKA 2BXHA 1FOUA 4BKEA 4LUHA 2DBUA 4C31B 2YDFA 2OZBB 2DYMA 2QMCA 2XMOA 1N5UA 2BXAA 4HGMB 4K2CA 5GHKA 4N0UD 2XVVA 3H3AA 2DBXA 1LOTA 4LA0A 2BXEA 5ID9A 3SQJA 4N3ZA 2ROHA 2XSIA 1KW2A 4W4UB 2XVUA 2I2ZA 1TF0A 1H9ZA 2VDBA 3NVMA 4J2VA 4DHXB 2CKXA 3JQZA 4Z69A 1H5WA 1IJGA 5DBYA 3MHSB 3TDLA 3FWCC 4G04A 3VQIA 4GDLB 2QHBA 4IW1A 4BY9C 1BJ5A 5BPKA 2DYOA 3KJLA 2BXOA 2DG5A 1JNBA 4MBEC 4HGKA 2E0XA 1E7CA 4L9KA 4M70B 1J7EA 4ZBQA 5B5TA 3UIVA 3WHQA 2EFEA 3GA9L 3GQUA 2BXFA 4K71A 4ZUXV 4L9QA 4FJCB 2I30A 5D7GA 3G9KD 1HK4A 3FNMA 2EFDA 5GINA 1LNSA 4OT2A 4OTUA 2EFCA 1HA2A 2Z8JA 3LU6A 1E7AA 3GQXA 3A73A 4OTTA 1HK2A 2KBZA 1O9XA 2QM6A 3JRYA 1GNJA 4N0FD 1MA9A 2BXIA 2NQOA 1E7IA 2BXCA 4L8UA 5FUOA 1E7HA 1KXPD 4FIPB 4GDXA 4LB9A 2OT3A 3ICXA 3NVKA 3KIKA 3CX9A 3FWBC 4TQ0A 4F5TA 3V08A 2BXPA 4F5UA 2XVQA 2DBWA 5GIOA 5HOZA 4IW2A 1BM0A 2BXMA 4GDKB 2XW1A 5DQFA 3MHHB 4F5VA 5IIUA 1E7BA 3A75A 2BXNA 3H37A 4S1YA 2BXLA 1BKEA 4NAWB 2Z8KA 1MIVA 4TQ1A 5ID7A 1MIYA 4ZBKA 3LU7A 3W1SA 3NVIA 2NNWA 2EFHA 1NT2B 3WHRA 2E0YA 3SIVB 2BXQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5IIX A;  1HK1 A;  4EMX A;  4LB2 A;  5IJF A;  3B9M A;  3V03 A;  1AO6 A;  5IJ5 A;  4OR0 A;  4E99 A;  1HK3 A;  2VUF A;  5IFO A;  2BXD A;  4JK4 A;  1GNI A;  1E7E A;  4PO0 A;  4G03 A;  4ZBR A;  4LUF A;  3V09 A;  2XW0 A;  2BXG A;  4F5S A;  5IJE A;  1E7F A;  3B9L A;  1E78 A;  1UOR A;  2BX8 A;  3LU8 A;  1HK5 A;  1E7G A;  2VUE A;  1J78 A;  2BXB A;  2XVW A;  2BXK A;  2BXH A;  4BKE A;  4LUH A;  2YDF A;  4HGM B;  1N5U A;  2BXA A;  4K2C A;  5GHK A;  4N0U D;  2XVV A;  1LOT A;  4LA0 A;  2BXE A;  5ID9 A;  3SQJ A;  2XSI A;  1KW2 A;  2XVU A;  2I2Z A;  1TF0 A;  1H9Z A;  4J2V A;  2VDB A;  3JQZ A;  4Z69 A;  5DBY A;  3TDL A;  4G04 A;  4IW1 A;  1BJ5 A;  2BXO A;  4HGK A;  1E7C A;  4L9K A;  4ZBQ A;  1J7E A;  3UIV A;  2BXF A;  4K71 A;  4L9Q A;  2I30 A;  1HK4 A;  4OT2 A;  1HA2 A;  3LU6 A;  1E7A A;  3A73 A;  1HK2 A;  1O9X A;  3JRY A;  1GNJ A;  4N0F D;  1MA9 A;  2BXI A;  1E7I A;  2BXC A;  4L8U A;  5FUO A;  1E7H A;  1KXP D;  4LB9 A;  3CX9 A;  4F5T A;  3V08 A;  2BXP A;  4F5U A;  2XVQ A;  5HOZ A;  4IW2 A;  1BM0 A;  2BXM A;  2XW1 A;  5DQF A;  4F5V A;  5IIU A;  1E7B A;  5IIH A;  2BXN A;  4S1Y A;  2BXL A;  1BKE A;  5ID7 A;  3LU7 A;  2BXQ A; 
#chains in the Genus database with same CATH topology
 5IIX A;  1HK1 A;  4EMX A;  4LB2 A;  5IJF A;  3B9M A;  3NMU A;  4G01 A;  4ZCG A;  5IJ5 A;  4OR0 A;  3V03 A;  4E99 A;  1AO6 A;  1HK3 A;  3SIU B;  2VUF A;  1MIW A;  5IFO A;  2BXD A;  4JK4 A;  4ZC6 A;  1GNI A;  2K0N A;  1E7E A;  4PO0 A;  2GUT A;  1SB0 A;  2Z8I A;  4FK5 B;  2JUH A;  4G03 A;  4ZBR A;  4LUF A;  3V09 A;  4GG2 A;  5GIP A;  2KWF A;  3PLA A;  2LXT A;  2XW0 A;  1TXU A;  2BXG A;  3M99 C;  5IIH A;  4Z9O A;  4F5S A;  2V36 A;  1KDX A;  1VZS A;  2LOQ A;  2AJE A;  5IJE A;  2LQH A;  1VFI A;  1E7F A;  3B9L A;  4I9O A;  1E78 A;  1UOR A;  2BX8 A;  3WHS A;  3LU8 A;  1HK5 A;  4WA6 B;  1E7G A;  2VUE A;  1J78 A;  2BXB A;  2XVW A;  2BXK A;  2BXH A;  1FOU A;  4BKE A;  4LUH A;  2DBU A;  4C31 B;  2YDF A;  2OZB B;  2DYM A;  2QMC A;  2XMO A;  1N5U A;  2BXA A;  4HGM B;  4K2C A;  5GHK A;  4N0U D;  2XVV A;  3H3A A;  2DBX A;  1LOT A;  4LA0 A;  2BXE A;  5ID9 A;  3SQJ A;  4N3Z A;  2ROH A;  2XSI A;  1KW2 A;  4W4U B;  2XVU A;  4D7X A;  1TF0 A;  2I2Z A;  1H9Z A;  2VDB A;  3NVM A;  4J2V A;  4DHX B;  2CKX A;  3JQZ A;  4Z69 A;  1H5W A;  1IJG A;  5DBY A;  3MHS B;  3TDL A;  3FWC C;  4G04 A;  3VQI A;  4GDL B;  2QHB A;  4IW1 A;  4BY9 C;  1BJ5 A;  5BPK A;  2DYO A;  3KJL A;  1MUH A;  2BXO A;  2AGH B;  2DG5 A;  1JNB A;  4MBE C;  4HGK A;  2E0X A;  1E7C A;  4L9K A;  4M70 B;  1J7E A;  4ZBQ A;  5B5T A;  3UIV A;  3WHQ A;  2EFE A;  3GA9 L;  3GQU A;  2BXF A;  4K71 A;  4ZUX V;  4L9Q A;  4FJC B;  2I30 A;  5D7G A;  3G9K D;  1HK4 A;  2LQI A;  3FNM A;  2EFD A;  5GIN A;  1LNS A;  4OT2 A;  4OTU A;  2EFC A;  1HA2 A;  2Z8J A;  3LU6 A;  1E7A A;  3GQX A;  3A73 A;  4OTT A;  1HK2 A;  2KBZ A;  1O9X A;  2QM6 A;  3JRY A;  1GNJ A;  1MUS A;  4DM0 A;  4N0F D;  1MA9 A;  2BXI A;  2NQO A;  1E7I A;  2BXC A;  4L8U A;  5FUO A;  1E7H A;  1KXP D;  3BPJ A;  3ECP A;  4FIP B;  4GDX A;  4LB9 A;  2OT3 A;  3ICX A;  3NVK A;  3KIK A;  3CX9 A;  3FWB C;  4TQ0 A;  4F5T A;  3V08 A;  2BXP A;  4F5U A;  2XVQ A;  2DBW A;  5GIO A;  1MM8 A;  5HOZ A;  4IW2 A;  1BM0 A;  2BXM A;  4GDK B;  2XW1 A;  5DQF A;  3MHH B;  4F5V A;  5IIU A;  1E7B A;  3A75 A;  2BXN A;  3H37 A;  4S1Y A;  2BXL A;  1BKE A;  2LXS A;  2Z8K A;  1MIV A;  4NAW B;  4TQ1 A;  5ID7 A;  1MIY A;  4ZBK A;  3LU7 A;  3W1S A;  3NVI A;  2NNW A;  2EFH A;  1NT2 B;  3WHR A;  2E0Y A;  3SIV B;  2BXQ A; 
#chains in the Genus database with same CATH homology
 5IIX A;  1HK1 A;  4EMX A;  4LB2 A;  5IJF A;  3B9M A;  3NMU A;  4G01 A;  4ZCG A;  5IJ5 A;  4OR0 A;  3V03 A;  4E99 A;  1AO6 A;  1HK3 A;  3SIU B;  2VUF A;  1MIW A;  5IFO A;  2BXD A;  4JK4 A;  4ZC6 A;  1GNI A;  1E7E A;  4PO0 A;  2Z8I A;  4FK5 B;  2JUH A;  4G03 A;  4ZBR A;  4LUF A;  3V09 A;  4GG2 A;  5GIP A;  3PLA A;  2XW0 A;  1TXU A;  2BXG A;  3M99 C;  5IIH A;  4Z9O A;  4F5S A;  2V36 A;  1VZS A;  2LOQ A;  2AJE A;  5IJE A;  1VFI A;  1E7F A;  3B9L A;  3WHS A;  1E78 A;  1UOR A;  2BX8 A;  3LU8 A;  1HK5 A;  4WA6 B;  1E7G A;  2VUE A;  1J78 A;  2BXB A;  2XVW A;  2BXK A;  2BXH A;  1FOU A;  4BKE A;  4LUH A;  2DBU A;  4C31 B;  2YDF A;  2OZB B;  2DYM A;  2QMC A;  2XMO A;  1N5U A;  2BXA A;  4HGM B;  4K2C A;  5GHK A;  4N0U D;  2XVV A;  3H3A A;  2DBX A;  1LOT A;  4LA0 A;  2BXE A;  5ID9 A;  3SQJ A;  4N3Z A;  2ROH A;  2XSI A;  1KW2 A;  4W4U B;  2XVU A;  2I2Z A;  1TF0 A;  1H9Z A;  2VDB A;  3NVM A;  4J2V A;  4DHX B;  2CKX A;  3JQZ A;  4Z69 A;  1H5W A;  1IJG A;  5DBY A;  3MHS B;  3TDL A;  3FWC C;  4G04 A;  3VQI A;  4GDL B;  2QHB A;  4IW1 A;  4BY9 C;  1BJ5 A;  5BPK A;  2DYO A;  3KJL A;  2BXO A;  2DG5 A;  1JNB A;  4MBE C;  4HGK A;  2E0X A;  1E7C A;  4L9K A;  4M70 B;  1J7E A;  4ZBQ A;  5B5T A;  3UIV A;  3WHQ A;  2EFE A;  3GA9 L;  3GQU A;  2BXF A;  4K71 A;  4ZUX V;  4L9Q A;  4FJC B;  2I30 A;  5D7G A;  3G9K D;  1HK4 A;  3FNM A;  2EFD A;  5GIN A;  1LNS A;  4OT2 A;  4OTU A;  2EFC A;  1HA2 A;  2Z8J A;  3LU6 A;  1E7A A;  3GQX A;  3A73 A;  4OTT A;  1HK2 A;  2KBZ A;  1O9X A;  2QM6 A;  3JRY A;  1GNJ A;  4N0F D;  1MA9 A;  2BXI A;  2NQO A;  1E7I A;  2BXC A;  4L8U A;  5FUO A;  1E7H A;  1KXP D;  4FIP B;  4GDX A;  4LB9 A;  2OT3 A;  3ICX A;  3NVK A;  3KIK A;  3CX9 A;  3FWB C;  4TQ0 A;  4F5T A;  3V08 A;  2BXP A;  4F5U A;  2XVQ A;  2DBW A;  5GIO A;  5HOZ A;  4IW2 A;  1BM0 A;  2BXM A;  4GDK B;  2XW1 A;  5DQF A;  3MHH B;  4F5V A;  5IIU A;  1E7B A;  3A75 A;  2BXN A;  3H37 A;  4S1Y A;  2BXL A;  1BKE A;  4NAW B;  2Z8K A;  1MIV A;  4TQ1 A;  5ID7 A;  1MIY A;  4ZBK A;  3LU7 A;  3W1S A;  3NVI A;  2NNW A;  2EFH A;  1NT2 B;  3WHR A;  2E0Y A;  3SIV B;  2BXQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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