2XVVA

Human serum albumin complexed with dansyl-l-asparagine and myristic acid
Total Genus 218
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
218
sequence length
582
structure length
582
Chain Sequence
HKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKEEQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords SERUM ALBUMIN
publication title Structural Basis of Binding of Fluorescent, Site-Specific Dansylated Amino Acids to Human Serum Albumin.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Transport protein
total genus 218
structure length 582
sequence length 582
ec nomenclature
pdb deposition date 2010-10-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xvvA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xvvA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xvvA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xvvA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xvvA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xvvA05
3B9LA 4L8UA 4PO0A 1AO6A 4S1YA 5IIUA 4K71A 2I2ZA 1UORA 2XVQA 4IW2A 4HGMB 4F5VA 1J78A 5ID7A 3SQJA 2BXHA 2BXCA 5IJEA 2BXNA 3V08A 2VUFA 4F5SA 2BX8A 4N0FD 4JK4A 4HGKA 4LB2A 2XW0A 2BXDA 3CX9A 5DQFA 1J7EA 1E7AA 1E7BA 1E7FA 1MA9A 5IIHA 3JQZA 4F5UA 1HK1A 2I30A 1O9XA 3B9MA 2BXAA 2BXFA 2BXIA 2VDBA 2BXMA 4OR0A 3UIVA 1HK5A 5ID9A 4LUFA 1BJ5A 2VUEA 2BXBA 1E7EA 5IFOA 1E78A 4L9QA 4LUHA 5IJ5A 1HK4A 2XSIA 4L9KA 3V03A 1TF0A 3A73A 2YDFA 4BKEA 4G04A 1N5UA 4K2CA 1HK3A 1GNJA 4LB9A 4Z69A 3LU8A 4E99A 1E7CA 5FUOA 5IIXA 2BXGA 4OT2A 1E7IA 2XVUA 2BXEA 4IW1A 3TDLA 1LOTA 3LU6A 1E7HA 2XW1A 1H9ZA 1GNIA 1HA2A 1KW2A 1KXPD 2BXLA 4EMXA 1BM0A 5GHKA 1HK2A 4N0UD 2BXQA 5DBYA 4F5TA 2BXOA 2XVVA 4LA0A 1BKEA 4G03A 2XVWA 2BXKA 1E7GA 2BXPA 4J2VA 5IJFA 3LU7A 5HOZA 3JRYA 4ZBQA 4ZBRA 3V09A
chains in the Genus database with same CATH superfamily
2XMOA 1JNBA 3B9LA 2QM6A 4BY9C 4GDKB 4I9OA 4L8UA 4FJCB 4PO0A 4C31B 2DBXA 2DG5A 1AO6A 4S1YA 5IIUA 1VZSA 4D7XA 3MHSB 2DBWA 4DHXB 3M99C 4K71A 2I2ZA 3BPJA 1UORA 2XVQA 4IW2A 4HGMB 4TQ0A 4F5VA 1J78A 5ID7A 3SQJA 2BXHA 2BXCA 2EFDA 2BXNA 3V08A 2VUFA 4F5SA 3FWBC 5IJEA 4DM0A 2BX8A 3G9KD 2OT3A 4N0FD 2EFEA 3SIUB 1SB0A 4HGKA 4JK4A 2CKXA 4LB2A 2XW0A 1MM8A 2NNWA 2BXDA 3CX9A 2K0NA 4ZCGA 5DQFA 1MUSA 1J7EA 1E7AA 1E7BA 1E7FA 3FWCC 5D7GA 1H5WA 1MA9A 5IIHA 3VQIA 3W1SA 4OTUA 2DYMA 2JUHA 1HK1A 2I30A 1O9XA 3JQZA 4F5UA 3B9MA 2BXAA 2BXFA 2OZBB 2V36A 2ROHA 2KWFA 2BXIA 2VDBA 5BPKA 4N3ZA 2BXMA 2EFHA 3ICXA 4NAWB 1HK5A 4OR0A 3UIVA 4LUFA 3WHRA 5ID9A 3NMUA 3FNMA 1BJ5A 2VUEA 2BXBA 5GIPA 1MUHA 1E7EA 4G01A 3ECPA 1NT2B 2E0XA 4WA6B 5IFOA 3WHSA 4M70B 4MBEC 4GDLB 1E78A 4L9QA 4LUHA 4FK5B 1HK4A 3KIKA 5IJ5A 5GINA 2XSIA 1KDXA 3NVIA 3KJLA 4L9KA 4ZBKA 2EFCA 3WHQA 3V03A 1TF0A 1IJGA 3A73A 2LXSA 1FOUA 2GUTA 2Z8JA 2YDFA 3GQUA 4BKEA 4G04A 1N5UA 2QHBA 3A75A 4K2CA 1HK3A 2Z8IA 1GNJA 4LB9A 4Z69A 5GIOA 1VFIA 3LU8A 4E99A 3NVKA 2AJEA 1E7CA 5FUOA 5IIXA 2BXGA 4OT2A 3SIVB 1E7IA 3GA9L 2XVUA 1MIYA 2BXEA 4IW1A 3TDLA 4GG2A 2Z8KA 4OTTA 1LOTA 3LU6A 1E7HA 2LOQA 2XW1A 3H3AA 1H9ZA 1GNIA 1HA2A 1KW2A 1MIWA 1KXPD 2NQOA 2QMCA 4TQ1A 4Z9OA 4ZUXV 2BXLA 4EMXA 1BM0A 5GHKA 1HK2A 4N0UD 2DBUA 2BXQA 2LXTA 2LQIA 1TXUA 5DBYA 4F5TA 2AGHB 4GDXA 2BXOA 2XVVA 3NVMA 5B5TA 1MIVA 4LA0A 1BKEA 4G03A 3GQXA 3MHHB 2XVWA 2BXKA 2E0YA 3PLAA 4FIPB 4W4UB 1E7GA 1LNSA 2BXPA 4J2VA 4ZC6A 5IJFA 3LU7A 5HOZA 3H37A 3JRYA 2LQHA 4ZBQA 4ZBRA 2KBZA 3V09A 2DYOA
chains in the Genus database with same CATH topology
2XMOA 1JNBA 3B9LA 2QM6A 4BY9C 4GDKB 4L8UA 4FJCB 4PO0A 4C31B 2DBXA 2DG5A 1AO6A 4S1YA 5IIUA 1VZSA 3MHSB 2DBWA 4DHXB 3M99C 4K71A 2I2ZA 1UORA 2XVQA 4IW2A 4HGMB 4TQ0A 4F5VA 1J78A 5ID7A 3SQJA 2BXHA 2BXCA 2EFDA 2BXNA 3V08A 2VUFA 4F5SA 3FWBC 5IJEA 2BX8A 3G9KD 2OT3A 4N0FD 2EFEA 3SIUB 4JK4A 4HGKA 2CKXA 4LB2A 2XW0A 2NNWA 2BXDA 3CX9A 4ZCGA 5DQFA 1J7EA 1E7AA 1E7BA 1E7FA 3FWCC 5D7GA 1H5WA 1MA9A 5IIHA 3VQIA 3W1SA 4OTUA 2DYMA 2JUHA 1HK1A 2I30A 1O9XA 3JQZA 4F5UA 3B9MA 2BXAA 2BXFA 2OZBB 2V36A 2ROHA 2BXIA 2VDBA 5BPKA 4N3ZA 2BXMA 2EFHA 3ICXA 4NAWB 1HK5A 4OR0A 3UIVA 4LUFA 3WHRA 5ID9A 3NMUA 3FNMA 1BJ5A 2VUEA 2BXBA 5GIPA 1E7EA 4G01A 1NT2B 2E0XA 4WA6B 5IFOA 3WHSA 4M70B 4MBEC 4GDLB 1E78A 4L9QA 4LUHA 4FK5B 1HK4A 3KIKA 5IJ5A 5GINA 2XSIA 3NVIA 3KJLA 4L9KA 4ZBKA 2EFCA 3WHQA 3V03A 1TF0A 1IJGA 3A73A 1FOUA 2Z8JA 2YDFA 3GQUA 4BKEA 4G04A 1N5UA 2QHBA 3A75A 4K2CA 1HK3A 2Z8IA 1GNJA 4LB9A 4Z69A 5GIOA 1VFIA 3LU8A 4E99A 3NVKA 2AJEA 1E7CA 5FUOA 5IIXA 2BXGA 4OT2A 3SIVB 1E7IA 3GA9L 2XVUA 1MIYA 2BXEA 4IW1A 3TDLA 4GG2A 2Z8KA 4OTTA 1LOTA 3LU6A 1E7HA 2LOQA 2XW1A 3H3AA 1H9ZA 1GNIA 1HA2A 1KW2A 1MIWA 1KXPD 2NQOA 2QMCA 4TQ1A 4Z9OA 4ZUXV 2BXLA 4EMXA 1BM0A 5GHKA 1HK2A 4N0UD 2DBUA 2BXQA 1TXUA 5DBYA 4F5TA 4GDXA 2BXOA 2XVVA 3NVMA 5B5TA 1MIVA 4LA0A 1BKEA 4G03A 3GQXA 3MHHB 2XVWA 2BXKA 2E0YA 3PLAA 4FIPB 4W4UB 1E7GA 1LNSA 2BXPA 4J2VA 4ZC6A 5IJFA 3LU7A 5HOZA 3H37A 3JRYA 4ZBQA 4ZBRA 2KBZA 3V09A 2DYOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3B9L A;  4L8U A;  4PO0 A;  1AO6 A;  4S1Y A;  5IIU A;  4K71 A;  2I2Z A;  1UOR A;  2XVQ A;  4IW2 A;  4HGM B;  4F5V A;  1J78 A;  5ID7 A;  3SQJ A;  2BXH A;  2BXC A;  5IJE A;  2BXN A;  3V08 A;  2VUF A;  4F5S A;  2BX8 A;  4N0F D;  4JK4 A;  4HGK A;  4LB2 A;  2XW0 A;  2BXD A;  3CX9 A;  5DQF A;  1J7E A;  1E7A A;  1E7B A;  1E7F A;  1MA9 A;  5IIH A;  3JQZ A;  4F5U A;  1HK1 A;  2I30 A;  1O9X A;  3B9M A;  2BXA A;  2BXF A;  2BXI A;  2VDB A;  2BXM A;  4OR0 A;  3UIV A;  1HK5 A;  5ID9 A;  4LUF A;  1BJ5 A;  2VUE A;  2BXB A;  1E7E A;  5IFO A;  1E78 A;  4L9Q A;  4LUH A;  5IJ5 A;  1HK4 A;  2XSI A;  4L9K A;  3V03 A;  1TF0 A;  3A73 A;  2YDF A;  4BKE A;  4G04 A;  1N5U A;  4K2C A;  1HK3 A;  1GNJ A;  4LB9 A;  4Z69 A;  3LU8 A;  4E99 A;  1E7C A;  5FUO A;  5IIX A;  2BXG A;  4OT2 A;  1E7I A;  2XVU A;  2BXE A;  4IW1 A;  3TDL A;  1LOT A;  3LU6 A;  1E7H A;  2XW1 A;  1H9Z A;  1GNI A;  1HA2 A;  1KW2 A;  1KXP D;  2BXL A;  4EMX A;  1BM0 A;  5GHK A;  1HK2 A;  4N0U D;  2BXQ A;  5DBY A;  4F5T A;  2BXO A;  2XVV A;  4LA0 A;  1BKE A;  4G03 A;  2XVW A;  2BXK A;  1E7G A;  2BXP A;  4J2V A;  5IJF A;  3LU7 A;  5HOZ A;  3JRY A;  4ZBQ A;  4ZBR A;  3V09 A; 
#chains in the Genus database with same CATH topology
 2XMO A;  1JNB A;  3B9L A;  2QM6 A;  4BY9 C;  4GDK B;  4I9O A;  4L8U A;  4FJC B;  4PO0 A;  4C31 B;  2DBX A;  2DG5 A;  1AO6 A;  4S1Y A;  5IIU A;  1VZS A;  4D7X A;  3MHS B;  2DBW A;  4DHX B;  3M99 C;  4K71 A;  2I2Z A;  3BPJ A;  1UOR A;  2XVQ A;  4IW2 A;  4HGM B;  4TQ0 A;  4F5V A;  1J78 A;  5ID7 A;  3SQJ A;  2BXH A;  2BXC A;  2EFD A;  2BXN A;  3V08 A;  2VUF A;  4F5S A;  3FWB C;  5IJE A;  4DM0 A;  2BX8 A;  3G9K D;  2OT3 A;  4N0F D;  2EFE A;  3SIU B;  1SB0 A;  4HGK A;  4JK4 A;  2CKX A;  4LB2 A;  2XW0 A;  1MM8 A;  2NNW A;  2BXD A;  3CX9 A;  2K0N A;  4ZCG A;  5DQF A;  1MUS A;  1J7E A;  1E7A A;  1E7B A;  1E7F A;  3FWC C;  5D7G A;  1H5W A;  1MA9 A;  5IIH A;  3VQI A;  3W1S A;  4OTU A;  2DYM A;  2JUH A;  1HK1 A;  2I30 A;  1O9X A;  3JQZ A;  4F5U A;  3B9M A;  2BXA A;  2BXF A;  2OZB B;  2V36 A;  2ROH A;  2KWF A;  2BXI A;  2VDB A;  5BPK A;  4N3Z A;  2BXM A;  2EFH A;  3ICX A;  4NAW B;  1HK5 A;  4OR0 A;  3UIV A;  4LUF A;  3WHR A;  5ID9 A;  3NMU A;  3FNM A;  1BJ5 A;  2VUE A;  2BXB A;  5GIP A;  1MUH A;  1E7E A;  4G01 A;  3ECP A;  1NT2 B;  2E0X A;  4WA6 B;  5IFO A;  3WHS A;  4M70 B;  4MBE C;  4GDL B;  1E78 A;  4L9Q A;  4LUH A;  4FK5 B;  1HK4 A;  3KIK A;  5IJ5 A;  5GIN A;  2XSI A;  1KDX A;  3NVI A;  3KJL A;  4L9K A;  4ZBK A;  2EFC A;  3WHQ A;  3V03 A;  1TF0 A;  1IJG A;  3A73 A;  2LXS A;  1FOU A;  2GUT A;  2Z8J A;  2YDF A;  3GQU A;  4BKE A;  4G04 A;  1N5U A;  2QHB A;  3A75 A;  4K2C A;  1HK3 A;  2Z8I A;  1GNJ A;  4LB9 A;  4Z69 A;  5GIO A;  1VFI A;  3LU8 A;  4E99 A;  3NVK A;  2AJE A;  1E7C A;  5FUO A;  5IIX A;  2BXG A;  4OT2 A;  3SIV B;  1E7I A;  3GA9 L;  2XVU A;  1MIY A;  2BXE A;  4IW1 A;  3TDL A;  4GG2 A;  2Z8K A;  4OTT A;  1LOT A;  3LU6 A;  1E7H A;  2LOQ A;  2XW1 A;  3H3A A;  1H9Z A;  1GNI A;  1HA2 A;  1KW2 A;  1MIW A;  1KXP D;  2NQO A;  2QMC A;  4TQ1 A;  4Z9O A;  4ZUX V;  2BXL A;  4EMX A;  1BM0 A;  5GHK A;  1HK2 A;  4N0U D;  2DBU A;  2BXQ A;  2LXT A;  2LQI A;  1TXU A;  5DBY A;  4F5T A;  2AGH B;  4GDX A;  2BXO A;  2XVV A;  3NVM A;  5B5T A;  1MIV A;  4LA0 A;  1BKE A;  4G03 A;  3GQX A;  3MHH B;  2XVW A;  2BXK A;  2E0Y A;  3PLA A;  4FIP B;  4W4U B;  1E7G A;  1LNS A;  2BXP A;  4J2V A;  4ZC6 A;  5IJF A;  3LU7 A;  5HOZ A;  3H37 A;  3JRY A;  2LQH A;  4ZBQ A;  4ZBR A;  2KBZ A;  3V09 A;  2DYO A; 
#chains in the Genus database with same CATH homology
 2XMO A;  1JNB A;  3B9L A;  2QM6 A;  4BY9 C;  4GDK B;  4L8U A;  4FJC B;  4PO0 A;  4C31 B;  2DBX A;  2DG5 A;  1AO6 A;  4S1Y A;  5IIU A;  1VZS A;  3MHS B;  2DBW A;  4DHX B;  3M99 C;  4K71 A;  2I2Z A;  1UOR A;  2XVQ A;  4IW2 A;  4HGM B;  4TQ0 A;  4F5V A;  1J78 A;  5ID7 A;  3SQJ A;  2BXH A;  2BXC A;  2EFD A;  2BXN A;  3V08 A;  2VUF A;  4F5S A;  3FWB C;  5IJE A;  2BX8 A;  3G9K D;  2OT3 A;  4N0F D;  2EFE A;  3SIU B;  4JK4 A;  4HGK A;  2CKX A;  4LB2 A;  2XW0 A;  2NNW A;  2BXD A;  3CX9 A;  4ZCG A;  5DQF A;  1J7E A;  1E7A A;  1E7B A;  1E7F A;  3FWC C;  5D7G A;  1H5W A;  1MA9 A;  5IIH A;  3VQI A;  3W1S A;  4OTU A;  2DYM A;  2JUH A;  1HK1 A;  2I30 A;  1O9X A;  3JQZ A;  4F5U A;  3B9M A;  2BXA A;  2BXF A;  2OZB B;  2V36 A;  2ROH A;  2BXI A;  2VDB A;  5BPK A;  4N3Z A;  2BXM A;  2EFH A;  3ICX A;  4NAW B;  1HK5 A;  4OR0 A;  3UIV A;  4LUF A;  3WHR A;  5ID9 A;  3NMU A;  3FNM A;  1BJ5 A;  2VUE A;  2BXB A;  5GIP A;  1E7E A;  4G01 A;  1NT2 B;  2E0X A;  4WA6 B;  5IFO A;  3WHS A;  4M70 B;  4MBE C;  4GDL B;  1E78 A;  4L9Q A;  4LUH A;  4FK5 B;  1HK4 A;  3KIK A;  5IJ5 A;  5GIN A;  2XSI A;  3NVI A;  3KJL A;  4L9K A;  4ZBK A;  2EFC A;  3WHQ A;  3V03 A;  1TF0 A;  1IJG A;  3A73 A;  1FOU A;  2Z8J A;  2YDF A;  3GQU A;  4BKE A;  4G04 A;  1N5U A;  2QHB A;  3A75 A;  4K2C A;  1HK3 A;  2Z8I A;  1GNJ A;  4LB9 A;  4Z69 A;  5GIO A;  1VFI A;  3LU8 A;  4E99 A;  3NVK A;  2AJE A;  1E7C A;  5FUO A;  5IIX A;  2BXG A;  4OT2 A;  3SIV B;  1E7I A;  3GA9 L;  2XVU A;  1MIY A;  2BXE A;  4IW1 A;  3TDL A;  4GG2 A;  2Z8K A;  4OTT A;  1LOT A;  3LU6 A;  1E7H A;  2LOQ A;  2XW1 A;  3H3A A;  1H9Z A;  1GNI A;  1HA2 A;  1KW2 A;  1MIW A;  1KXP D;  2NQO A;  2QMC A;  4TQ1 A;  4Z9O A;  4ZUX V;  2BXL A;  4EMX A;  1BM0 A;  5GHK A;  1HK2 A;  4N0U D;  2DBU A;  2BXQ A;  1TXU A;  5DBY A;  4F5T A;  4GDX A;  2BXO A;  2XVV A;  3NVM A;  5B5T A;  1MIV A;  4LA0 A;  1BKE A;  4G03 A;  3GQX A;  3MHH B;  2XVW A;  2BXK A;  2E0Y A;  3PLA A;  4FIP B;  4W4U B;  1E7G A;  1LNS A;  2BXP A;  4J2V A;  4ZC6 A;  5IJF A;  3LU7 A;  5HOZ A;  3H37 A;  3JRY A;  4ZBQ A;  4ZBR A;  2KBZ A;  3V09 A;  2DYO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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