4PO0A

Crystal structure of leporine serum albumin in complex with naproxen
Total Genus 227
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
227
sequence length
583
structure length
583
Chain Sequence
AHKSEIAHRFNDVGEEHFIGLVLITFSQYLQKCPYEEHAKLVKEVTDLAKACVADESAANCDKSLHDIFGDKICALPSLRDTYGDVADCCEKKEPERNECFLHHKDDKPDLPPFARPEADVLCKAFHDDEKAFFGHYLYEVARRHPYFYAPELLYYAQKYKAILTECCEAADKGACLTPKLDALKEKALISAAQERLRCASIQKFGDRAYKAWALVRLSQRFPKADFTDISKIVTDLTKVHKECCHGDLLECADDRADLAKYMCEHQETISSHLKECCDKPILEKAHCIYGLHNDETPAGLPAVAEEFVEDKDVCKNYEEAKDLFLGKFLYEYSRRHPDYSVVLLLRLGKAYEATLKKCCATDDPHACYAKVLDEFQPLVDEPKNLVKQNCELYEQLGDYNFQNALLVRYTKKVPQVSTPTLVEISRSLGKVGSKCCKHPEAERLPCVEDYLSVVLNRLCVLHEKTPVSEKVTKCCSESLVDRRPCFSALGPDETYVPKEFNAETFTFHADICTLPETERKIKKQTALVELVKHKPHATNDQLKTVVGEFTALLDKCCSAEDKEACFAVEGPKLVESSKATLG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Serum albumin
publication title Structural studies of bovine, equine, and leporine serum albumin complexes with naproxen.
pubmed doi rcsb
molecule tags Transport protein
total genus 227
structure length 583
sequence length 583
ec nomenclature
pdb deposition date 2014-02-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4po0A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4po0A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4po0A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4po0A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4po0A05
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4po0A06
1J78A 1GNIA 2XVWA 3LU7A 4PO0A 1HA2A 3SQJA 1E7EA 1E78A 2BXOA 2BXNA 1E7HA 2I30A 4N0FD 2BXLA 5HOZA 3V03A 2BXKA 3A73A 3UIVA 1E7FA 2XSIA 3B9LA 2VUEA 1E7CA 2XW0A 4E99A 1UORA 1KXPD 1N5UA 4N0UD 4LA0A 5IIUA 5IJ5A 1TF0A 3LU8A 1HK2A 1E7BA 1BJ5A 4LB9A 1KW2A 2VDBA 4F5SA 2BXHA 4G04A 1GNJA 2BXFA 5DBYA 1J7EA 3B9MA 2XW1A 5IFOA 3LU6A 3V08A 4LUFA 1E7GA 2BXMA 2XVUA 3TDLA 5IJEA 3V09A 2XVQA 4IW1A 5ID9A 1AO6A 4L8UA 2XVVA 4Z69A 4F5VA 2BXEA 4OR0A 2BXIA 2VUFA 4S1YA 4BKEA 5DQFA 4LB2A 4L9QA 4F5UA 4HGMB 4L9KA 4ZBRA 5IIHA 2BXBA 2YDFA 1HK3A 5GHKA 2BXGA 1LOTA 1HK4A 1E7IA 4OT2A 1E7AA 2BXCA 4LUHA 2BXPA 2I2ZA 4JK4A 1HK1A 4G03A 2BX8A 1O9XA 4ZBQA 3JQZA 5ID7A 4J2VA 1MA9A 4IW2A 3JRYA 1HK5A 4F5TA 2BXDA 4EMXA 1BM0A 1H9ZA 5FUOA 5IIXA 3CX9A 1BKEA 2BXAA 2BXQA 5IJFA 4K71A 4K2CA 4HGKA
chains in the Genus database with same CATH superfamily
1J78A 1GNIA 2XVWA 3WHRA 1IJGA 5BPKA 5GIPA 2ROHA 3LU7A 4PO0A 1HA2A 3SQJA 3FWCC 1E7EA 2K0NA 1E78A 2EFHA 2XMOA 2DYOA 2BXOA 1E7HA 2I30A 3KIKA 2BXLA 2E0XA 2LXTA 4N0FD 5HOZA 3V03A 2BXKA 3A73A 3UIVA 1E7FA 4BY9C 2XSIA 3B9LA 2VUEA 1E7CA 2XW0A 4E99A 1VZSA 1UORA 1KXPD 4DHXB 1N5UA 1SB0A 2NQOA 2QMCA 4LA0A 4N0UD 5IIUA 5GINA 2OZBB 5IJ5A 3NMUA 1TF0A 5B5TA 3LU8A 1HK2A 3MHSB 1E7BA 1BJ5A 2LOQA 2LXSA 2LQHA 3KJLA 4LB9A 1KW2A 2VDBA 4F5SA 4ZUXV 2AGHB 2Z8JA 2BXHA 4G04A 1GNJA 2BXFA 2LQIA 2GUTA 3H37A 1J7EA 4HGKA 4TQ1A 5DBYA 3FWBC 3ICXA 3B9MA 1TXUA 2XW1A 5IFOA 3LU6A 3V08A 3NVIA 4M70B 4LUFA 3GA9L 4GDKB 3BPJA 3SIVB 4OTTA 4ZCGA 1E7GA 2Z8KA 2BXMA 2XVUA 3GQUA 3TDLA 5IJEA 1MUSA 2E0YA 4FJCB 3V09A 2XVQA 4IW1A 5ID9A 1AO6A 3ECPA 3M99C 4L8UA 1MUHA 2XVVA 4GDXA 4Z69A 2V36A 4F5VA 4D7XA 1VFIA 2BXEA 2EFDA 2JUHA 4I9OA 2NNWA 4OR0A 3WHQA 2BXIA 2VUFA 3MHHB 4S1YA 4BKEA 5DQFA 4LB2A 4N3ZA 1JNBA 4L9QA 4F5UA 1MIVA 3FNMA 4HGMB 1NT2B 4L9KA 4C31B 4FK5B 4ZBRA 4W4UB 5IIHA 2AJEA 4Z9OA 4WA6B 2BXBA 2YDFA 5GIOA 1HK3A 3G9KD 4G01A 4GDLB 2EFEA 4MBEC 5GHKA 2BXGA 1LOTA 4TQ0A 1H5WA 1HK4A 3W1SA 2DYMA 1KDXA 1E7IA 4OT2A 1E7AA 2EFCA 3PLAA 1MIYA 1MIWA 2QHBA 2DBUA 2BXCA 4LUHA 2BXPA 2I2ZA 2OT3A 4JK4A 1HK1A 4ZC6A 2DBWA 4G03A 4NAWB 2BX8A 3H3AA 4ZBKA 1O9XA 4ZBQA 2KBZA 3JQZA 3VQIA 5ID7A 4J2VA 1MA9A 4IW2A 3JRYA 3NVKA 4FIPB 1HK5A 1LNSA 3SIUB 4F5TA 2BXDA 2Z8IA 4EMXA 1BM0A 1H9ZA 5D7GA 5FUOA 5IIXA 4GG2A 2KWFA 2DG5A 3CX9A 1BKEA 3GQXA 2DBXA 1MM8A 2BXAA 2CKXA 4DM0A 2BXQA 5IJFA 4K71A 4K2CA 3A75A 3WHSA 1FOUA 2QM6A 2BXNA 3NVMA 4OTUA
chains in the Genus database with same CATH topology
1J78A 1GNIA 2XVWA 3WHRA 1IJGA 5BPKA 5GIPA 2ROHA 3LU7A 4PO0A 1HA2A 3SQJA 3FWCC 1E7EA 1E78A 2EFHA 2XMOA 2DYOA 2BXOA 1E7HA 2I30A 3KIKA 2BXLA 2E0XA 4N0FD 5HOZA 3V03A 2BXKA 3A73A 3UIVA 1E7FA 4BY9C 2XSIA 3B9LA 2VUEA 1E7CA 2XW0A 4E99A 1VZSA 1UORA 1KXPD 4DHXB 1N5UA 2QMCA 2NQOA 4LA0A 4N0UD 2OZBB 5IIUA 5GINA 3NMUA 5IJ5A 1TF0A 5B5TA 3LU8A 1HK2A 3MHSB 1E7BA 1BJ5A 2LOQA 4LB9A 3KJLA 1KW2A 2VDBA 4F5SA 4ZUXV 2Z8JA 2BXHA 4G04A 1GNJA 2BXFA 3H37A 5DBYA 1J7EA 4HGKA 4TQ1A 3FWBC 3ICXA 3B9MA 1TXUA 2XW1A 5IFOA 3LU6A 3V08A 3NVIA 4M70B 4LUFA 3GA9L 4GDKB 3SIVB 4OTTA 4ZCGA 1E7GA 2Z8KA 2BXMA 2XVUA 3GQUA 3TDLA 5IJEA 2E0YA 4FJCB 3V09A 2XVQA 4IW1A 5ID9A 1AO6A 3M99C 4L8UA 2XVVA 4GDXA 4Z69A 2V36A 4F5VA 1VFIA 2BXEA 2EFDA 2JUHA 4OR0A 2NNWA 3WHQA 2BXIA 2VUFA 3MHHB 4S1YA 4BKEA 5DQFA 4LB2A 4N3ZA 1JNBA 4L9QA 4F5UA 1MIVA 3FNMA 4HGMB 1NT2B 4L9KA 4C31B 4FK5B 4ZBRA 4W4UB 5IIHA 2AJEA 4Z9OA 4WA6B 2BXBA 2YDFA 5GIOA 1HK3A 3G9KD 4G01A 4GDLB 2EFEA 4MBEC 5GHKA 2BXGA 1LOTA 4TQ0A 1H5WA 1HK4A 3W1SA 2DYMA 1E7IA 4OT2A 1E7AA 2EFCA 3PLAA 1MIYA 1MIWA 2QHBA 2DBUA 2BXCA 4LUHA 2BXPA 2I2ZA 2OT3A 4JK4A 1HK1A 4ZC6A 2DBWA 4G03A 4NAWB 2BX8A 3H3AA 4ZBKA 1O9XA 4ZBQA 2KBZA 3JQZA 3VQIA 5ID7A 4J2VA 1MA9A 4IW2A 3JRYA 3NVKA 4FIPB 1HK5A 1LNSA 3SIUB 4F5TA 2BXDA 2Z8IA 4EMXA 1BM0A 1H9ZA 5D7GA 5FUOA 5IIXA 4GG2A 2DG5A 3CX9A 1BKEA 3GQXA 2DBXA 2BXAA 2CKXA 2BXQA 5IJFA 4K71A 4K2CA 3A75A 3WHSA 1FOUA 2QM6A 2BXNA 3NVMA 4OTUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1J78 A;  1GNI A;  2XVW A;  3LU7 A;  4PO0 A;  1HA2 A;  3SQJ A;  1E7E A;  1E78 A;  2BXO A;  2BXN A;  1E7H A;  2I30 A;  4N0F D;  2BXL A;  5HOZ A;  3V03 A;  2BXK A;  3A73 A;  3UIV A;  1E7F A;  2XSI A;  3B9L A;  2VUE A;  1E7C A;  2XW0 A;  4E99 A;  1UOR A;  1KXP D;  1N5U A;  4N0U D;  4LA0 A;  5IIU A;  5IJ5 A;  1TF0 A;  3LU8 A;  1HK2 A;  1E7B A;  1BJ5 A;  4LB9 A;  1KW2 A;  2VDB A;  4F5S A;  2BXH A;  4G04 A;  1GNJ A;  2BXF A;  5DBY A;  1J7E A;  3B9M A;  2XW1 A;  5IFO A;  3LU6 A;  3V08 A;  4LUF A;  1E7G A;  2BXM A;  2XVU A;  3TDL A;  5IJE A;  3V09 A;  2XVQ A;  4IW1 A;  5ID9 A;  1AO6 A;  4L8U A;  2XVV A;  4Z69 A;  4F5V A;  2BXE A;  4OR0 A;  2BXI A;  2VUF A;  4S1Y A;  4BKE A;  5DQF A;  4LB2 A;  4L9Q A;  4F5U A;  4HGM B;  4L9K A;  4ZBR A;  5IIH A;  2BXB A;  2YDF A;  1HK3 A;  5GHK A;  2BXG A;  1LOT A;  1HK4 A;  1E7I A;  4OT2 A;  1E7A A;  2BXC A;  4LUH A;  2BXP A;  2I2Z A;  4JK4 A;  1HK1 A;  4G03 A;  2BX8 A;  1O9X A;  4ZBQ A;  3JQZ A;  5ID7 A;  4J2V A;  1MA9 A;  4IW2 A;  3JRY A;  1HK5 A;  4F5T A;  2BXD A;  4EMX A;  1BM0 A;  1H9Z A;  5FUO A;  5IIX A;  3CX9 A;  1BKE A;  2BXA A;  2BXQ A;  5IJF A;  4K71 A;  4K2C A;  4HGK A; 
#chains in the Genus database with same CATH topology
 1J78 A;  1GNI A;  2XVW A;  3WHR A;  1IJG A;  5BPK A;  5GIP A;  2ROH A;  3LU7 A;  4PO0 A;  1HA2 A;  3SQJ A;  3FWC C;  1E7E A;  2K0N A;  1E78 A;  2EFH A;  2XMO A;  2DYO A;  2BXO A;  1E7H A;  2I30 A;  3KIK A;  2BXL A;  2E0X A;  2LXT A;  4N0F D;  5HOZ A;  3V03 A;  2BXK A;  3A73 A;  3UIV A;  1E7F A;  4BY9 C;  2XSI A;  3B9L A;  2VUE A;  1E7C A;  2XW0 A;  4E99 A;  1VZS A;  1UOR A;  1KXP D;  4DHX B;  1N5U A;  1SB0 A;  2NQO A;  2QMC A;  4LA0 A;  4N0U D;  5IIU A;  5GIN A;  2OZB B;  5IJ5 A;  3NMU A;  1TF0 A;  5B5T A;  3LU8 A;  1HK2 A;  3MHS B;  1E7B A;  1BJ5 A;  2LOQ A;  2LXS A;  2LQH A;  3KJL A;  4LB9 A;  1KW2 A;  2VDB A;  4F5S A;  4ZUX V;  2AGH B;  2Z8J A;  2BXH A;  4G04 A;  1GNJ A;  2BXF A;  2LQI A;  2GUT A;  3H37 A;  1J7E A;  4HGK A;  4TQ1 A;  5DBY A;  3FWB C;  3ICX A;  3B9M A;  1TXU A;  2XW1 A;  5IFO A;  3LU6 A;  3V08 A;  3NVI A;  4M70 B;  4LUF A;  3GA9 L;  4GDK B;  3BPJ A;  3SIV B;  4OTT A;  4ZCG A;  1E7G A;  2Z8K A;  2BXM A;  2XVU A;  3GQU A;  3TDL A;  5IJE A;  1MUS A;  2E0Y A;  4FJC B;  3V09 A;  2XVQ A;  4IW1 A;  5ID9 A;  1AO6 A;  3ECP A;  3M99 C;  4L8U A;  1MUH A;  2XVV A;  4GDX A;  4Z69 A;  2V36 A;  4F5V A;  4D7X A;  1VFI A;  2BXE A;  2EFD A;  2JUH A;  4I9O A;  2NNW A;  4OR0 A;  3WHQ A;  2BXI A;  2VUF A;  3MHH B;  4S1Y A;  4BKE A;  5DQF A;  4LB2 A;  4N3Z A;  1JNB A;  4L9Q A;  4F5U A;  1MIV A;  3FNM A;  4HGM B;  1NT2 B;  4L9K A;  4C31 B;  4FK5 B;  4ZBR A;  4W4U B;  5IIH A;  2AJE A;  4Z9O A;  4WA6 B;  2BXB A;  2YDF A;  5GIO A;  1HK3 A;  3G9K D;  4G01 A;  4GDL B;  2EFE A;  4MBE C;  5GHK A;  2BXG A;  1LOT A;  4TQ0 A;  1H5W A;  1HK4 A;  3W1S A;  2DYM A;  1KDX A;  1E7I A;  4OT2 A;  1E7A A;  2EFC A;  3PLA A;  1MIY A;  1MIW A;  2QHB A;  2DBU A;  2BXC A;  4LUH A;  2BXP A;  2I2Z A;  2OT3 A;  4JK4 A;  1HK1 A;  4ZC6 A;  2DBW A;  4G03 A;  4NAW B;  2BX8 A;  3H3A A;  4ZBK A;  1O9X A;  4ZBQ A;  2KBZ A;  3JQZ A;  3VQI A;  5ID7 A;  4J2V A;  1MA9 A;  4IW2 A;  3JRY A;  3NVK A;  4FIP B;  1HK5 A;  1LNS A;  3SIU B;  4F5T A;  2BXD A;  2Z8I A;  4EMX A;  1BM0 A;  1H9Z A;  5D7G A;  5FUO A;  5IIX A;  4GG2 A;  2KWF A;  2DG5 A;  3CX9 A;  1BKE A;  3GQX A;  2DBX A;  1MM8 A;  2BXA A;  2CKX A;  4DM0 A;  2BXQ A;  5IJF A;  4K71 A;  4K2C A;  3A75 A;  3WHS A;  1FOU A;  2QM6 A;  2BXN A;  3NVM A;  4OTU A; 
#chains in the Genus database with same CATH homology
 1J78 A;  1GNI A;  2XVW A;  3WHR A;  1IJG A;  5BPK A;  5GIP A;  2ROH A;  3LU7 A;  4PO0 A;  1HA2 A;  3SQJ A;  3FWC C;  1E7E A;  1E78 A;  2EFH A;  2XMO A;  2DYO A;  2BXO A;  1E7H A;  2I30 A;  3KIK A;  2BXL A;  2E0X A;  4N0F D;  5HOZ A;  3V03 A;  2BXK A;  3A73 A;  3UIV A;  1E7F A;  4BY9 C;  2XSI A;  3B9L A;  2VUE A;  1E7C A;  2XW0 A;  4E99 A;  1VZS A;  1UOR A;  1KXP D;  4DHX B;  1N5U A;  2QMC A;  2NQO A;  4LA0 A;  4N0U D;  2OZB B;  5IIU A;  5GIN A;  3NMU A;  5IJ5 A;  1TF0 A;  5B5T A;  3LU8 A;  1HK2 A;  3MHS B;  1E7B A;  1BJ5 A;  2LOQ A;  4LB9 A;  3KJL A;  1KW2 A;  2VDB A;  4F5S A;  4ZUX V;  2Z8J A;  2BXH A;  4G04 A;  1GNJ A;  2BXF A;  3H37 A;  5DBY A;  1J7E A;  4HGK A;  4TQ1 A;  3FWB C;  3ICX A;  3B9M A;  1TXU A;  2XW1 A;  5IFO A;  3LU6 A;  3V08 A;  3NVI A;  4M70 B;  4LUF A;  3GA9 L;  4GDK B;  3SIV B;  4OTT A;  4ZCG A;  1E7G A;  2Z8K A;  2BXM A;  2XVU A;  3GQU A;  3TDL A;  5IJE A;  2E0Y A;  4FJC B;  3V09 A;  2XVQ A;  4IW1 A;  5ID9 A;  1AO6 A;  3M99 C;  4L8U A;  2XVV A;  4GDX A;  4Z69 A;  2V36 A;  4F5V A;  1VFI A;  2BXE A;  2EFD A;  2JUH A;  4OR0 A;  2NNW A;  3WHQ A;  2BXI A;  2VUF A;  3MHH B;  4S1Y A;  4BKE A;  5DQF A;  4LB2 A;  4N3Z A;  1JNB A;  4L9Q A;  4F5U A;  1MIV A;  3FNM A;  4HGM B;  1NT2 B;  4L9K A;  4C31 B;  4FK5 B;  4ZBR A;  4W4U B;  5IIH A;  2AJE A;  4Z9O A;  4WA6 B;  2BXB A;  2YDF A;  5GIO A;  1HK3 A;  3G9K D;  4G01 A;  4GDL B;  2EFE A;  4MBE C;  5GHK A;  2BXG A;  1LOT A;  4TQ0 A;  1H5W A;  1HK4 A;  3W1S A;  2DYM A;  1E7I A;  4OT2 A;  1E7A A;  2EFC A;  3PLA A;  1MIY A;  1MIW A;  2QHB A;  2DBU A;  2BXC A;  4LUH A;  2BXP A;  2I2Z A;  2OT3 A;  4JK4 A;  1HK1 A;  4ZC6 A;  2DBW A;  4G03 A;  4NAW B;  2BX8 A;  3H3A A;  4ZBK A;  1O9X A;  4ZBQ A;  2KBZ A;  3JQZ A;  3VQI A;  5ID7 A;  4J2V A;  1MA9 A;  4IW2 A;  3JRY A;  3NVK A;  4FIP B;  1HK5 A;  1LNS A;  3SIU B;  4F5T A;  2BXD A;  2Z8I A;  4EMX A;  1BM0 A;  1H9Z A;  5D7G A;  5FUO A;  5IIX A;  4GG2 A;  2DG5 A;  3CX9 A;  1BKE A;  3GQX A;  2DBX A;  2BXA A;  2CKX A;  2BXQ A;  5IJF A;  4K71 A;  4K2C A;  3A75 A;  3WHS A;  1FOU A;  2QM6 A;  2BXN A;  3NVM A;  4OTU A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...