2XSIA

Human serum albumin complexed with dansyl-l-glutamate and myristic acid
Total Genus 222
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
222
sequence length
582
structure length
582
Chain Sequence
HKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKEEQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords SERUM ALBUMIN
publication title Structural Basis of Binding of Fluorescent, Site-Specific Dansylated Amino Acids to Human Serum Albumin.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Transport protein
total genus 222
structure length 582
sequence length 582
ec nomenclature
pdb deposition date 2010-10-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xsiA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xsiA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xsiA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xsiA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xsiA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xsiA05
1HA2A 4F5UA 4L8UA 1O9XA 2BXFA 4OT2A 4HGKA 5IIUA 4N0FD 4LUFA 2BXKA 2BXPA 5IJ5A 2XVVA 5IIHA 1HK2A 1E7GA 4HGMB 1H9ZA 3V08A 1E7BA 4N0UD 2I30A 2BXAA 3B9LA 2BXDA 5ID7A 4PO0A 4F5TA 5DBYA 4Z69A 1E7AA 1E7FA 4OR0A 3V09A 1HK4A 4L9QA 5GHKA 4LB9A 1TF0A 3LU6A 4K71A 5ID9A 1BJ5A 2XSIA 2VDBA 1BM0A 4LUHA 2BXHA 4JK4A 5DQFA 2XVWA 4LB2A 3LU8A 1KXPD 4S1YA 1E7CA 2BXMA 2BXNA 1HK1A 4L9KA 1KW2A 2BXEA 4J2VA 1HK5A 2VUFA 3JQZA 1AO6A 1J7EA 1BKEA 4G03A 2BXIA 3SQJA 4K2CA 3V03A 2YDFA 2BXBA 2XW1A 1E7HA 1J78A 2BXQA 3B9MA 4F5SA 4BKEA 3CX9A 4ZBRA 2XVQA 5IJFA 4F5VA 2BX8A 1E78A 4G04A 2I2ZA 1GNIA 1MA9A 1E7IA 2BXCA 3LU7A 4IW1A 3JRYA 2XW0A 2BXGA 4LA0A 2VUEA 5IFOA 1HK3A 1UORA 1GNJA 3A73A 1LOTA 4E99A 3TDLA 2BXLA 3UIVA 5FUOA 2XVUA 5IJEA 4EMXA 4IW2A 2BXOA 1E7EA 5HOZA 4ZBQA 5IIXA 1N5UA
chains in the Genus database with same CATH superfamily
1HA2A 1MIYA 4WA6B 1MUSA 1SB0A 2EFEA 4F5UA 1MIVA 4L8UA 2Z8JA 1O9XA 2BXFA 1MIWA 2LXSA 4OT2A 4HGKA 4TQ0A 1JNBA 5IIUA 4N0FD 4LUFA 2BXKA 2LQHA 3H37A 2JUHA 1KDXA 2BXPA 2DBWA 2XVVA 5IJ5A 3GQXA 5IIHA 1MUHA 1HK2A 4ZCGA 5B5TA 2AJEA 1E7GA 2NQOA 4HGMB 2OZBB 2NNWA 3MHSB 1H9ZA 3V08A 3WHSA 1IJGA 1E7BA 4N0UD 5BPKA 2I30A 2BXAA 3B9LA 1TXUA 3ECPA 2BXDA 1VFIA 5ID7A 4PO0A 2LXTA 4OTTA 2XMOA 4F5TA 3FNMA 4MBEC 5DBYA 2AGHB 4GDXA 3NMUA 4Z69A 1E7AA 1E7FA 3A75A 4OR0A 3V09A 4I9OA 2DYMA 5D7GA 1HK4A 4L9QA 5GHKA 4LB9A 1TF0A 5GIOA 3LU6A 1H5WA 3BPJA 2KWFA 4W4UB 4D7XA 4K71A 4BY9C 2LQIA 3GA9L 5ID9A 2QHBA 2EFHA 2GUTA 1BJ5A 2EFDA 2E0XA 2V36A 2XSIA 1LNSA 2VDBA 2OT3A 1BM0A 4LUHA 2BXHA 4JK4A 4OTUA 2KBZA 5DQFA 3M99C 2XVWA 4LB2A 1KXPD 3FWBC 3LU8A 1E7CA 2BXMA 2BXNA 1HK1A 4L9KA 4S1YA 3G9KD 3H3AA 3KIKA 4DM0A 4FIPB 5GIPA 2QM6A 3KJLA 4M70B 3NVKA 1KW2A 2BXEA 4J2VA 1HK5A 1FOUA 2VUFA 2DBXA 1J7EA 1BKEA 1N5UA 3JQZA 1AO6A 4ZUXV 4G03A 2BXIA 3SQJA 1MM8A 4K2CA 3V03A 2YDFA 2BXBA 4GDKB 2XW1A 1E7HA 1J78A 2BXQA 3B9MA 4GDLB 4F5SA 4C31B 4BKEA 4FK5B 2EFCA 3CX9A 4TQ1A 4ZBRA 2DG5A 2XVQA 3SIUB 5IJFA 4F5VA 2BX8A 1E78A 2ROHA 4Z9OA 4G04A 2I2ZA 4NAWB 2LOQA 2K0NA 2CKXA 3PLAA 1GNIA 1MA9A 1E7IA 2BXCA 2E0YA 3LU7A 4IW1A 2Z8KA 3JRYA 4G01A 2DBUA 2XW0A 3GQUA 4ZBKA 4ZC6A 3W1SA 2BXGA 3VQIA 3ICXA 4LA0A 3WHRA 5GINA 2VUEA 5IFOA 2QMCA 1HK3A 1UORA 1GNJA 3A73A 1LOTA 4E99A 3TDLA 2BXLA 3UIVA 5FUOA 2XVUA 4N3ZA 5IJEA 4EMXA 3NVIA 4FJCB 4IW2A 3WHQA 2DYOA 3NVMA 3MHHB 2BXOA 1E7EA 2Z8IA 3FWCC 4GG2A 5HOZA 4ZBQA 4DHXB 3SIVB 1NT2B 5IIXA 1VZSA
chains in the Genus database with same CATH topology
1HA2A 1MIYA 4WA6B 2EFEA 4F5UA 1MIVA 4L8UA 2Z8JA 1O9XA 2BXFA 1MIWA 4OT2A 4HGKA 4TQ0A 1JNBA 5IIUA 4N0FD 4LUFA 2BXKA 3H37A 2JUHA 2BXPA 2DBWA 2XVVA 5IJ5A 3GQXA 5IIHA 1HK2A 4ZCGA 5B5TA 2AJEA 1E7GA 2NQOA 4HGMB 2OZBB 2NNWA 3MHSB 1H9ZA 3V08A 3WHSA 1IJGA 1E7BA 4N0UD 5BPKA 2I30A 2BXAA 3B9LA 1TXUA 2BXDA 1VFIA 5ID7A 4PO0A 4F5TA 4OTTA 2XMOA 3FNMA 4MBEC 5DBYA 3NMUA 4GDXA 4Z69A 1E7AA 1E7FA 3A75A 4OR0A 3V09A 2DYMA 5D7GA 1HK4A 4L9QA 5GHKA 4LB9A 1TF0A 5GIOA 3LU6A 1H5WA 4W4UB 4K71A 4BY9C 3GA9L 5ID9A 2QHBA 2EFHA 1BJ5A 2EFDA 2E0XA 2V36A 2XSIA 1LNSA 2VDBA 2OT3A 1BM0A 4LUHA 2BXHA 4JK4A 4OTUA 2KBZA 5DQFA 3M99C 2XVWA 4LB2A 1KXPD 3FWBC 3LU8A 1E7CA 2BXMA 2BXNA 1HK1A 4L9KA 4S1YA 3G9KD 3H3AA 3KIKA 4FIPB 5GIPA 2QM6A 3KJLA 4M70B 3NVKA 1KW2A 2BXEA 4J2VA 1HK5A 1FOUA 2VUFA 2DBXA 1J7EA 1BKEA 1N5UA 3JQZA 1AO6A 4ZUXV 4G03A 2BXIA 3SQJA 4K2CA 3V03A 2YDFA 2BXBA 4GDKB 2XW1A 1E7HA 1J78A 2BXQA 3B9MA 4GDLB 4F5SA 4C31B 4BKEA 4FK5B 2EFCA 3CX9A 4TQ1A 4ZBRA 2DG5A 2XVQA 3SIUB 5IJFA 4F5VA 2BX8A 1E78A 2ROHA 4Z9OA 4G04A 2I2ZA 4NAWB 2LOQA 3PLAA 2CKXA 1GNIA 1MA9A 1E7IA 2BXCA 2E0YA 3LU7A 4IW1A 2Z8KA 3JRYA 4G01A 2DBUA 2XW0A 3GQUA 4ZBKA 4ZC6A 3W1SA 2BXGA 3VQIA 3ICXA 4LA0A 3WHRA 5GINA 2VUEA 5IFOA 2QMCA 1HK3A 1UORA 1GNJA 3A73A 1LOTA 4E99A 3TDLA 2BXLA 3UIVA 5FUOA 2XVUA 4N3ZA 5IJEA 4EMXA 3NVIA 4FJCB 4IW2A 3WHQA 2DYOA 3NVMA 3MHHB 2BXOA 1E7EA 2Z8IA 3FWCC 4GG2A 5HOZA 4ZBQA 4DHXB 3SIVB 1NT2B 5IIXA 1VZSA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HA2 A;  4F5U A;  4L8U A;  1O9X A;  2BXF A;  4OT2 A;  4HGK A;  5IIU A;  4N0F D;  4LUF A;  2BXK A;  2BXP A;  5IJ5 A;  2XVV A;  5IIH A;  1HK2 A;  1E7G A;  4HGM B;  1H9Z A;  3V08 A;  1E7B A;  4N0U D;  2I30 A;  2BXA A;  3B9L A;  2BXD A;  5ID7 A;  4PO0 A;  4F5T A;  5DBY A;  4Z69 A;  1E7A A;  1E7F A;  4OR0 A;  3V09 A;  1HK4 A;  4L9Q A;  5GHK A;  4LB9 A;  1TF0 A;  3LU6 A;  4K71 A;  5ID9 A;  1BJ5 A;  2XSI A;  2VDB A;  1BM0 A;  4LUH A;  2BXH A;  4JK4 A;  5DQF A;  2XVW A;  4LB2 A;  3LU8 A;  1KXP D;  4S1Y A;  1E7C A;  2BXM A;  2BXN A;  1HK1 A;  4L9K A;  1KW2 A;  2BXE A;  4J2V A;  1HK5 A;  2VUF A;  3JQZ A;  1AO6 A;  1J7E A;  1BKE A;  4G03 A;  2BXI A;  3SQJ A;  4K2C A;  3V03 A;  2YDF A;  2BXB A;  2XW1 A;  1E7H A;  1J78 A;  2BXQ A;  3B9M A;  4F5S A;  4BKE A;  3CX9 A;  4ZBR A;  2XVQ A;  5IJF A;  4F5V A;  2BX8 A;  1E78 A;  4G04 A;  2I2Z A;  1GNI A;  1MA9 A;  1E7I A;  2BXC A;  3LU7 A;  4IW1 A;  3JRY A;  2XW0 A;  2BXG A;  4LA0 A;  2VUE A;  5IFO A;  1HK3 A;  1UOR A;  1GNJ A;  3A73 A;  1LOT A;  4E99 A;  3TDL A;  2BXL A;  3UIV A;  5FUO A;  2XVU A;  5IJE A;  4EMX A;  4IW2 A;  2BXO A;  1E7E A;  5HOZ A;  4ZBQ A;  5IIX A;  1N5U A; 
#chains in the Genus database with same CATH topology
 1HA2 A;  1MIY A;  4WA6 B;  1MUS A;  1SB0 A;  2EFE A;  4F5U A;  1MIV A;  4L8U A;  2Z8J A;  1O9X A;  2BXF A;  1MIW A;  2LXS A;  4OT2 A;  4HGK A;  4TQ0 A;  1JNB A;  5IIU A;  4N0F D;  4LUF A;  2BXK A;  2LQH A;  3H37 A;  2JUH A;  1KDX A;  2BXP A;  2DBW A;  2XVV A;  5IJ5 A;  3GQX A;  5IIH A;  1MUH A;  1HK2 A;  4ZCG A;  5B5T A;  2AJE A;  1E7G A;  2NQO A;  4HGM B;  2OZB B;  2NNW A;  3MHS B;  1H9Z A;  3V08 A;  3WHS A;  1IJG A;  1E7B A;  4N0U D;  5BPK A;  2I30 A;  2BXA A;  3B9L A;  1TXU A;  3ECP A;  2BXD A;  1VFI A;  5ID7 A;  4PO0 A;  2LXT A;  4OTT A;  2XMO A;  4F5T A;  3FNM A;  4MBE C;  5DBY A;  2AGH B;  4GDX A;  3NMU A;  4Z69 A;  1E7A A;  1E7F A;  3A75 A;  4OR0 A;  3V09 A;  4I9O A;  2DYM A;  5D7G A;  1HK4 A;  4L9Q A;  5GHK A;  4LB9 A;  1TF0 A;  5GIO A;  3LU6 A;  1H5W A;  3BPJ A;  2KWF A;  4W4U B;  4D7X A;  4K71 A;  4BY9 C;  2LQI A;  3GA9 L;  5ID9 A;  2QHB A;  2EFH A;  2GUT A;  1BJ5 A;  2EFD A;  2E0X A;  2V36 A;  2XSI A;  1LNS A;  2VDB A;  2OT3 A;  1BM0 A;  4LUH A;  2BXH A;  4JK4 A;  4OTU A;  2KBZ A;  5DQF A;  3M99 C;  2XVW A;  4LB2 A;  1KXP D;  3FWB C;  3LU8 A;  1E7C A;  2BXM A;  2BXN A;  1HK1 A;  4L9K A;  4S1Y A;  3G9K D;  3H3A A;  3KIK A;  4DM0 A;  4FIP B;  5GIP A;  2QM6 A;  3KJL A;  4M70 B;  3NVK A;  1KW2 A;  2BXE A;  4J2V A;  1HK5 A;  1FOU A;  2VUF A;  2DBX A;  1J7E A;  1BKE A;  1N5U A;  3JQZ A;  1AO6 A;  4ZUX V;  4G03 A;  2BXI A;  3SQJ A;  1MM8 A;  4K2C A;  3V03 A;  2YDF A;  2BXB A;  4GDK B;  2XW1 A;  1E7H A;  1J78 A;  2BXQ A;  3B9M A;  4GDL B;  4F5S A;  4C31 B;  4BKE A;  4FK5 B;  2EFC A;  3CX9 A;  4TQ1 A;  4ZBR A;  2DG5 A;  2XVQ A;  3SIU B;  5IJF A;  4F5V A;  2BX8 A;  1E78 A;  2ROH A;  4Z9O A;  4G04 A;  2I2Z A;  4NAW B;  2LOQ A;  2K0N A;  2CKX A;  3PLA A;  1GNI A;  1MA9 A;  1E7I A;  2BXC A;  2E0Y A;  3LU7 A;  4IW1 A;  2Z8K A;  3JRY A;  4G01 A;  2DBU A;  2XW0 A;  3GQU A;  4ZBK A;  4ZC6 A;  3W1S A;  2BXG A;  3VQI A;  3ICX A;  4LA0 A;  3WHR A;  5GIN A;  2VUE A;  5IFO A;  2QMC A;  1HK3 A;  1UOR A;  1GNJ A;  3A73 A;  1LOT A;  4E99 A;  3TDL A;  2BXL A;  3UIV A;  5FUO A;  2XVU A;  4N3Z A;  5IJE A;  4EMX A;  3NVI A;  4FJC B;  4IW2 A;  3WHQ A;  2DYO A;  3NVM A;  3MHH B;  2BXO A;  1E7E A;  2Z8I A;  3FWC C;  4GG2 A;  5HOZ A;  4ZBQ A;  4DHX B;  3SIV B;  1NT2 B;  5IIX A;  1VZS A; 
#chains in the Genus database with same CATH homology
 1HA2 A;  1MIY A;  4WA6 B;  2EFE A;  4F5U A;  1MIV A;  4L8U A;  2Z8J A;  1O9X A;  2BXF A;  1MIW A;  4OT2 A;  4HGK A;  4TQ0 A;  1JNB A;  5IIU A;  4N0F D;  4LUF A;  2BXK A;  3H37 A;  2JUH A;  2BXP A;  2DBW A;  2XVV A;  5IJ5 A;  3GQX A;  5IIH A;  1HK2 A;  4ZCG A;  5B5T A;  2AJE A;  1E7G A;  2NQO A;  4HGM B;  2OZB B;  2NNW A;  3MHS B;  1H9Z A;  3V08 A;  3WHS A;  1IJG A;  1E7B A;  4N0U D;  5BPK A;  2I30 A;  2BXA A;  3B9L A;  1TXU A;  2BXD A;  1VFI A;  5ID7 A;  4PO0 A;  4F5T A;  4OTT A;  2XMO A;  3FNM A;  4MBE C;  5DBY A;  3NMU A;  4GDX A;  4Z69 A;  1E7A A;  1E7F A;  3A75 A;  4OR0 A;  3V09 A;  2DYM A;  5D7G A;  1HK4 A;  4L9Q A;  5GHK A;  4LB9 A;  1TF0 A;  5GIO A;  3LU6 A;  1H5W A;  4W4U B;  4K71 A;  4BY9 C;  3GA9 L;  5ID9 A;  2QHB A;  2EFH A;  1BJ5 A;  2EFD A;  2E0X A;  2V36 A;  2XSI A;  1LNS A;  2VDB A;  2OT3 A;  1BM0 A;  4LUH A;  2BXH A;  4JK4 A;  4OTU A;  2KBZ A;  5DQF A;  3M99 C;  2XVW A;  4LB2 A;  1KXP D;  3FWB C;  3LU8 A;  1E7C A;  2BXM A;  2BXN A;  1HK1 A;  4L9K A;  4S1Y A;  3G9K D;  3H3A A;  3KIK A;  4FIP B;  5GIP A;  2QM6 A;  3KJL A;  4M70 B;  3NVK A;  1KW2 A;  2BXE A;  4J2V A;  1HK5 A;  1FOU A;  2VUF A;  2DBX A;  1J7E A;  1BKE A;  1N5U A;  3JQZ A;  1AO6 A;  4ZUX V;  4G03 A;  2BXI A;  3SQJ A;  4K2C A;  3V03 A;  2YDF A;  2BXB A;  4GDK B;  2XW1 A;  1E7H A;  1J78 A;  2BXQ A;  3B9M A;  4GDL B;  4F5S A;  4C31 B;  4BKE A;  4FK5 B;  2EFC A;  3CX9 A;  4TQ1 A;  4ZBR A;  2DG5 A;  2XVQ A;  3SIU B;  5IJF A;  4F5V A;  2BX8 A;  1E78 A;  2ROH A;  4Z9O A;  4G04 A;  2I2Z A;  4NAW B;  2LOQ A;  3PLA A;  2CKX A;  1GNI A;  1MA9 A;  1E7I A;  2BXC A;  2E0Y A;  3LU7 A;  4IW1 A;  2Z8K A;  3JRY A;  4G01 A;  2DBU A;  2XW0 A;  3GQU A;  4ZBK A;  4ZC6 A;  3W1S A;  2BXG A;  3VQI A;  3ICX A;  4LA0 A;  3WHR A;  5GIN A;  2VUE A;  5IFO A;  2QMC A;  1HK3 A;  1UOR A;  1GNJ A;  3A73 A;  1LOT A;  4E99 A;  3TDL A;  2BXL A;  3UIV A;  5FUO A;  2XVU A;  4N3Z A;  5IJE A;  4EMX A;  3NVI A;  4FJC B;  4IW2 A;  3WHQ A;  2DYO A;  3NVM A;  3MHH B;  2BXO A;  1E7E A;  2Z8I A;  3FWC C;  4GG2 A;  5HOZ A;  4ZBQ A;  4DHX B;  3SIV B;  1NT2 B;  5IIX A;  1VZS A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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