4E99A

Human serum albumin complex with perfluorooctane sulfonate potassium
Total Genus 226
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
226
sequence length
567
structure length
554
Chain Sequence
SEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Serum albumin
publication title Structural evidence of perfluorooctane sulfonate transport by human serum albumin
pubmed doi rcsb
source organism Homo sapiens
total genus 226
structure length 554
sequence length 567
ec nomenclature
pdb deposition date 2012-03-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4e99A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4e99A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4e99A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4e99A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4e99A06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4e99A05
4F5VA 1E7EA 2BXFA 5IJ5A 2BXAA 2BXCA 1E7CA 2BXNA 1HK1A 1HA2A 4HGMB 5IJFA 1HK5A 1BM0A 4ZBRA 4K71A 1E7FA 1KW2A 4ZBQA 4BKEA 4F5UA 2VUFA 4JK4A 2XW0A 4IW2A 1H9ZA 1E78A 5IIUA 4LB9A 2BXBA 2BX8A 2BXLA 1N5UA 2I30A 2I2ZA 5IIHA 2VUEA 1J78A 1AO6A 5DQFA 4EMXA 5GHKA 4J2VA 5HOZA 1GNJA 4LUHA 5DBYA 1E7GA 3V03A 4F5SA 2XVVA 3LU7A 3JQZA 4L9QA 2XSIA 4S1YA 1GNIA 3CX9A 1E7IA 4E99A 4IW1A 1E7AA 1HK2A 1MA9A 1J7EA 2XVUA 2YDFA 4G03A 1HK3A 4LB2A 1BKEA 1HK4A 4L9KA 4N0FD 4OT2A 3B9MA 4Z69A 1E7BA 4G04A 2XW1A 1LOTA 4L8UA 1UORA 3LU8A 1TF0A 2BXHA 4OR0A 2XVQA 1BJ5A 2BXOA 3SQJA 2BXIA 5FUOA 3LU6A 2BXDA 2BXPA 3TDLA 5ID7A 1O9XA 2BXQA 4F5TA 2VDBA 2XVWA 4N0UD 3UIVA 2BXMA 4LUFA 5ID9A 1E7HA 5IJEA 1KXPD 2BXKA 2BXGA 3V08A 4HGKA 5IFOA 4PO0A 5IIXA 3JRYA 3V09A 4K2CA 2BXEA 3A73A 3B9LA 4LA0A
chains in the Genus database with same CATH superfamily
3FNMA 4F5VA 1E7EA 2BXFA 2NNWA 5IJ5A 3W1SA 2CKXA 2EFCA 2XMOA 2BXAA 4GDLB 4NAWB 2BXCA 3ECPA 1E7CA 2BXNA 4ZCGA 1HK1A 1HA2A 2AJEA 4HGMB 1H5WA 1HK5A 1BM0A 5IJFA 4ZBRA 3NVMA 4I9OA 3PLAA 2LQIA 1IJGA 3GA9L 2V36A 4K71A 1E7FA 1KW2A 3H3AA 4TQ0A 4ZBQA 4BKEA 4F5UA 3SIVB 2VUFA 2DG5A 4JK4A 4FJCB 2XW0A 3WHSA 2DBXA 4IW2A 1H9ZA 1E78A 2OZBB 2E0YA 5IIUA 4LB9A 3GQXA 4WA6B 2BXBA 2BX8A 2BXLA 5BPKA 3WHRA 4G01A 1N5UA 2I30A 2I2ZA 5IIHA 2VUEA 3FWBC 1J78A 3VQIA 1AO6A 1VFIA 2E0XA 5DQFA 4EMXA 3MHHB 4TQ1A 5GHKA 3GQUA 4J2VA 5D7GA 5HOZA 2GUTA 4C31B 1GNJA 4LUHA 2DBWA 2DBUA 5DBYA 1E7GA 4FK5B 3V03A 2EFHA 2LOQA 4F5SA 2XVVA 3LU7A 3JQZA 4L9QA 2XSIA 4S1YA 1GNIA 2EFEA 4N3ZA 3CX9A 1E7IA 4E99A 4IW1A 1E7AA 3KJLA 3WHQA 1MIVA 1HK2A 1MA9A 1J7EA 2DYMA 2OT3A 2XVUA 2LQHA 4ZC6A 2YDFA 2QHBA 4GG2A 4G03A 1HK3A 4LB2A 1BKEA 1HK4A 4L9KA 3BPJA 3M99C 4DHXB 4N0FD 4OT2A 5GINA 3B9MA 2JUHA 2DYOA 4OTUA 1E7BA 4Z69A 3MHSB 4OTTA 3FWCC 4G04A 2XW1A 1LOTA 1MUSA 3NVKA 4L8UA 1JNBA 1UORA 2LXTA 4ZUXV 3LU8A 2LXSA 2QMCA 1TF0A 2BXHA 3H37A 4OR0A 2XVQA 5GIOA 2KBZA 1BJ5A 4GDXA 5B5TA 2BXOA 4W4UB 5GIPA 3SQJA 1KDXA 1MUHA 2BXIA 3G9KD 5FUOA 1NT2B 1TXUA 2K0NA 2Z8JA 1VZSA 3LU6A 1MIYA 4BY9C 4DM0A 3NMUA 2BXDA 2BXPA 3TDLA 2NQOA 5ID7A 1O9XA 2ROHA 2BXQA 4Z9OA 4F5TA 4FIPB 4ZBKA 1FOUA 2VDBA 2XVWA 3NVIA 4N0UD 3UIVA 2BXMA 4LUFA 4D7XA 2AGHB 4MBEC 2Z8KA 5ID9A 1E7HA 5IJEA 1MIWA 1KXPD 3A75A 2QM6A 2BXKA 1LNSA 2EFDA 2BXGA 1MM8A 3SIUB 2KWFA 3V08A 4HGKA 5IFOA 4M70B 4PO0A 5IIXA 3JRYA 2Z8IA 3V09A 1SB0A 3ICXA 4K2CA 2BXEA 3KIKA 3A73A 4GDKB 3B9LA 4LA0A
chains in the Genus database with same CATH topology
3FNMA 4F5VA 1E7EA 2BXFA 2NNWA 5IJ5A 3W1SA 2CKXA 2EFCA 2XMOA 2BXAA 4GDLB 4NAWB 2BXCA 1E7CA 2BXNA 4ZCGA 1HK1A 1HA2A 2AJEA 4HGMB 1H5WA 1HK5A 1BM0A 5IJFA 4ZBRA 3NVMA 3PLAA 1IJGA 3GA9L 2V36A 4K71A 1E7FA 1KW2A 3H3AA 4TQ0A 4ZBQA 4BKEA 4F5UA 3SIVB 2VUFA 2DG5A 4JK4A 4FJCB 2XW0A 3WHSA 2DBXA 4IW2A 1H9ZA 1E78A 2OZBB 2E0YA 5IIUA 4LB9A 3GQXA 4WA6B 2BXBA 2BX8A 2BXLA 5BPKA 3WHRA 4G01A 1N5UA 2I30A 2I2ZA 5IIHA 2VUEA 3FWBC 1J78A 3VQIA 1AO6A 1VFIA 2E0XA 5DQFA 4EMXA 3MHHB 4TQ1A 5GHKA 3GQUA 4J2VA 5D7GA 5HOZA 4C31B 1GNJA 4LUHA 2DBWA 2DBUA 5DBYA 1E7GA 4FK5B 3V03A 2EFHA 2LOQA 4F5SA 2XVVA 3LU7A 3JQZA 4L9QA 2XSIA 4S1YA 1GNIA 2EFEA 4N3ZA 3CX9A 1E7IA 4E99A 4IW1A 1E7AA 3KJLA 3WHQA 1MIVA 1HK2A 1MA9A 1J7EA 2DYMA 2OT3A 2XVUA 4ZC6A 2YDFA 2QHBA 4GG2A 4G03A 1HK3A 4LB2A 1BKEA 1HK4A 4L9KA 3M99C 4DHXB 4N0FD 4OT2A 5GINA 3B9MA 2JUHA 2DYOA 4OTUA 1E7BA 4Z69A 3MHSB 4OTTA 3FWCC 4G04A 2XW1A 1LOTA 3NVKA 4L8UA 1JNBA 1UORA 4ZUXV 3LU8A 2QMCA 1TF0A 2BXHA 3H37A 4OR0A 2XVQA 5GIOA 2KBZA 1BJ5A 4GDXA 5B5TA 2BXOA 4W4UB 5GIPA 3SQJA 2BXIA 3G9KD 5FUOA 1NT2B 1TXUA 2Z8JA 1VZSA 3LU6A 1MIYA 4BY9C 3NMUA 2BXDA 2BXPA 3TDLA 2NQOA 5ID7A 1O9XA 2ROHA 2BXQA 4Z9OA 4F5TA 4FIPB 4ZBKA 1FOUA 2VDBA 2XVWA 3NVIA 4N0UD 3UIVA 2BXMA 4LUFA 4MBEC 2Z8KA 5ID9A 1E7HA 5IJEA 1MIWA 1KXPD 3A75A 2QM6A 2BXKA 1LNSA 2EFDA 2BXGA 3SIUB 3V08A 4HGKA 5IFOA 4M70B 4PO0A 5IIXA 3JRYA 2Z8IA 3V09A 3ICXA 4K2CA 2BXEA 3KIKA 3A73A 4GDKB 3B9LA 4LA0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4F5V A;  1E7E A;  2BXF A;  5IJ5 A;  2BXA A;  2BXC A;  1E7C A;  2BXN A;  1HK1 A;  1HA2 A;  4HGM B;  5IJF A;  1HK5 A;  1BM0 A;  4ZBR A;  4K71 A;  1E7F A;  1KW2 A;  4ZBQ A;  4BKE A;  4F5U A;  2VUF A;  4JK4 A;  2XW0 A;  4IW2 A;  1H9Z A;  1E78 A;  5IIU A;  4LB9 A;  2BXB A;  2BX8 A;  2BXL A;  1N5U A;  2I30 A;  2I2Z A;  5IIH A;  2VUE A;  1J78 A;  1AO6 A;  5DQF A;  4EMX A;  5GHK A;  4J2V A;  5HOZ A;  1GNJ A;  4LUH A;  5DBY A;  1E7G A;  3V03 A;  4F5S A;  2XVV A;  3LU7 A;  3JQZ A;  4L9Q A;  2XSI A;  4S1Y A;  1GNI A;  3CX9 A;  1E7I A;  4E99 A;  4IW1 A;  1E7A A;  1HK2 A;  1MA9 A;  1J7E A;  2XVU A;  2YDF A;  4G03 A;  1HK3 A;  4LB2 A;  1BKE A;  1HK4 A;  4L9K A;  4N0F D;  4OT2 A;  3B9M A;  4Z69 A;  1E7B A;  4G04 A;  2XW1 A;  1LOT A;  4L8U A;  1UOR A;  3LU8 A;  1TF0 A;  2BXH A;  4OR0 A;  2XVQ A;  1BJ5 A;  2BXO A;  3SQJ A;  2BXI A;  5FUO A;  3LU6 A;  2BXD A;  2BXP A;  3TDL A;  5ID7 A;  1O9X A;  2BXQ A;  4F5T A;  2VDB A;  2XVW A;  4N0U D;  3UIV A;  2BXM A;  4LUF A;  5ID9 A;  1E7H A;  5IJE A;  1KXP D;  2BXK A;  2BXG A;  3V08 A;  4HGK A;  5IFO A;  4PO0 A;  5IIX A;  3JRY A;  3V09 A;  4K2C A;  2BXE A;  3A73 A;  3B9L A;  4LA0 A; 
#chains in the Genus database with same CATH topology
 3FNM A;  4F5V A;  1E7E A;  2BXF A;  2NNW A;  5IJ5 A;  3W1S A;  2CKX A;  2EFC A;  2XMO A;  2BXA A;  4GDL B;  4NAW B;  2BXC A;  3ECP A;  1E7C A;  2BXN A;  4ZCG A;  1HK1 A;  1HA2 A;  2AJE A;  4HGM B;  1H5W A;  1HK5 A;  1BM0 A;  5IJF A;  4ZBR A;  3NVM A;  4I9O A;  3PLA A;  2LQI A;  1IJG A;  3GA9 L;  2V36 A;  4K71 A;  1E7F A;  1KW2 A;  3H3A A;  4TQ0 A;  4ZBQ A;  4BKE A;  4F5U A;  3SIV B;  2VUF A;  2DG5 A;  4JK4 A;  4FJC B;  2XW0 A;  3WHS A;  2DBX A;  4IW2 A;  1H9Z A;  1E78 A;  2OZB B;  2E0Y A;  5IIU A;  4LB9 A;  3GQX A;  4WA6 B;  2BXB A;  2BX8 A;  2BXL A;  5BPK A;  3WHR A;  4G01 A;  1N5U A;  2I30 A;  2I2Z A;  5IIH A;  2VUE A;  3FWB C;  1J78 A;  3VQI A;  1AO6 A;  1VFI A;  2E0X A;  5DQF A;  4EMX A;  3MHH B;  4TQ1 A;  5GHK A;  3GQU A;  4J2V A;  5D7G A;  5HOZ A;  2GUT A;  4C31 B;  1GNJ A;  4LUH A;  2DBW A;  2DBU A;  5DBY A;  1E7G A;  4FK5 B;  3V03 A;  2EFH A;  2LOQ A;  4F5S A;  2XVV A;  3LU7 A;  3JQZ A;  4L9Q A;  2XSI A;  4S1Y A;  1GNI A;  2EFE A;  4N3Z A;  3CX9 A;  1E7I A;  4E99 A;  4IW1 A;  1E7A A;  3KJL A;  3WHQ A;  1MIV A;  1HK2 A;  1MA9 A;  1J7E A;  2DYM A;  2OT3 A;  2XVU A;  2LQH A;  4ZC6 A;  2YDF A;  2QHB A;  4GG2 A;  4G03 A;  1HK3 A;  4LB2 A;  1BKE A;  1HK4 A;  4L9K A;  3BPJ A;  3M99 C;  4DHX B;  4N0F D;  4OT2 A;  5GIN A;  3B9M A;  2JUH A;  2DYO A;  4OTU A;  1E7B A;  4Z69 A;  3MHS B;  4OTT A;  3FWC C;  4G04 A;  2XW1 A;  1LOT A;  1MUS A;  3NVK A;  4L8U A;  1JNB A;  1UOR A;  2LXT A;  4ZUX V;  3LU8 A;  2LXS A;  2QMC A;  1TF0 A;  2BXH A;  3H37 A;  4OR0 A;  2XVQ A;  5GIO A;  2KBZ A;  1BJ5 A;  4GDX A;  5B5T A;  2BXO A;  4W4U B;  5GIP A;  3SQJ A;  1KDX A;  1MUH A;  2BXI A;  3G9K D;  5FUO A;  1NT2 B;  1TXU A;  2K0N A;  2Z8J A;  1VZS A;  3LU6 A;  1MIY A;  4BY9 C;  4DM0 A;  3NMU A;  2BXD A;  2BXP A;  3TDL A;  2NQO A;  5ID7 A;  1O9X A;  2ROH A;  2BXQ A;  4Z9O A;  4F5T A;  4FIP B;  4ZBK A;  1FOU A;  2VDB A;  2XVW A;  3NVI A;  4N0U D;  3UIV A;  2BXM A;  4LUF A;  4D7X A;  2AGH B;  4MBE C;  2Z8K A;  5ID9 A;  1E7H A;  5IJE A;  1MIW A;  1KXP D;  3A75 A;  2QM6 A;  2BXK A;  1LNS A;  2EFD A;  2BXG A;  1MM8 A;  3SIU B;  2KWF A;  3V08 A;  4HGK A;  5IFO A;  4M70 B;  4PO0 A;  5IIX A;  3JRY A;  2Z8I A;  3V09 A;  1SB0 A;  3ICX A;  4K2C A;  2BXE A;  3KIK A;  3A73 A;  4GDK B;  3B9L A;  4LA0 A; 
#chains in the Genus database with same CATH homology
 3FNM A;  4F5V A;  1E7E A;  2BXF A;  2NNW A;  5IJ5 A;  3W1S A;  2CKX A;  2EFC A;  2XMO A;  2BXA A;  4GDL B;  4NAW B;  2BXC A;  1E7C A;  2BXN A;  4ZCG A;  1HK1 A;  1HA2 A;  2AJE A;  4HGM B;  1H5W A;  1HK5 A;  1BM0 A;  5IJF A;  4ZBR A;  3NVM A;  3PLA A;  1IJG A;  3GA9 L;  2V36 A;  4K71 A;  1E7F A;  1KW2 A;  3H3A A;  4TQ0 A;  4ZBQ A;  4BKE A;  4F5U A;  3SIV B;  2VUF A;  2DG5 A;  4JK4 A;  4FJC B;  2XW0 A;  3WHS A;  2DBX A;  4IW2 A;  1H9Z A;  1E78 A;  2OZB B;  2E0Y A;  5IIU A;  4LB9 A;  3GQX A;  4WA6 B;  2BXB A;  2BX8 A;  2BXL A;  5BPK A;  3WHR A;  4G01 A;  1N5U A;  2I30 A;  2I2Z A;  5IIH A;  2VUE A;  3FWB C;  1J78 A;  3VQI A;  1AO6 A;  1VFI A;  2E0X A;  5DQF A;  4EMX A;  3MHH B;  4TQ1 A;  5GHK A;  3GQU A;  4J2V A;  5D7G A;  5HOZ A;  4C31 B;  1GNJ A;  4LUH A;  2DBW A;  2DBU A;  5DBY A;  1E7G A;  4FK5 B;  3V03 A;  2EFH A;  2LOQ A;  4F5S A;  2XVV A;  3LU7 A;  3JQZ A;  4L9Q A;  2XSI A;  4S1Y A;  1GNI A;  2EFE A;  4N3Z A;  3CX9 A;  1E7I A;  4E99 A;  4IW1 A;  1E7A A;  3KJL A;  3WHQ A;  1MIV A;  1HK2 A;  1MA9 A;  1J7E A;  2DYM A;  2OT3 A;  2XVU A;  4ZC6 A;  2YDF A;  2QHB A;  4GG2 A;  4G03 A;  1HK3 A;  4LB2 A;  1BKE A;  1HK4 A;  4L9K A;  3M99 C;  4DHX B;  4N0F D;  4OT2 A;  5GIN A;  3B9M A;  2JUH A;  2DYO A;  4OTU A;  1E7B A;  4Z69 A;  3MHS B;  4OTT A;  3FWC C;  4G04 A;  2XW1 A;  1LOT A;  3NVK A;  4L8U A;  1JNB A;  1UOR A;  4ZUX V;  3LU8 A;  2QMC A;  1TF0 A;  2BXH A;  3H37 A;  4OR0 A;  2XVQ A;  5GIO A;  2KBZ A;  1BJ5 A;  4GDX A;  5B5T A;  2BXO A;  4W4U B;  5GIP A;  3SQJ A;  2BXI A;  3G9K D;  5FUO A;  1NT2 B;  1TXU A;  2Z8J A;  1VZS A;  3LU6 A;  1MIY A;  4BY9 C;  3NMU A;  2BXD A;  2BXP A;  3TDL A;  2NQO A;  5ID7 A;  1O9X A;  2ROH A;  2BXQ A;  4Z9O A;  4F5T A;  4FIP B;  4ZBK A;  1FOU A;  2VDB A;  2XVW A;  3NVI A;  4N0U D;  3UIV A;  2BXM A;  4LUF A;  4MBE C;  2Z8K A;  5ID9 A;  1E7H A;  5IJE A;  1MIW A;  1KXP D;  3A75 A;  2QM6 A;  2BXK A;  1LNS A;  2EFD A;  2BXG A;  3SIU B;  3V08 A;  4HGK A;  5IFO A;  4M70 B;  4PO0 A;  5IIX A;  3JRY A;  2Z8I A;  3V09 A;  3ICX A;  4K2C A;  2BXE A;  3KIK A;  3A73 A;  4GDK B;  3B9L A;  4LA0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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